Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009395.01.T01 | XP_024632480.1 | 91.444 | 187 | 11 | 2 | 1 | 186 | 48 | 230 | 8.22E-92 | 277 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009395.01.T01 | Q9D0C1 | 45.946 | 74 | 34 | 1 | 29 | 102 | 203 | 270 | 1.16E-16 | 79 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009395.01.T01 | A0A072V812 | 91.444 | 187 | 11 | 2 | 1 | 186 | 48 | 230 | 3.93e-92 | 277 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047959.01 | MsG0280009395.01 | -0.822922 | 1.828080e-53 | 1.551315e-50 |
| MsG0080048964.01 | MsG0280009395.01 | -0.805506 | 1.291862e-49 | 6.846278e-47 |
| MsG0080049032.01 | MsG0280009395.01 | -0.800127 | 1.667575e-48 | 7.703617e-46 |
| MsG0180000240.01 | MsG0280009395.01 | 0.841922 | 3.541949e-58 | 5.283524e-55 |
| MsG0180000470.01 | MsG0280009395.01 | -0.821939 | 3.091962e-53 | 2.551325e-50 |
| MsG0180000503.01 | MsG0280009395.01 | -0.843840 | 1.093994e-58 | 1.733441e-55 |
| MsG0180000546.01 | MsG0280009395.01 | -0.827823 | 1.264192e-54 | 1.234166e-51 |
| MsG0180000550.01 | MsG0280009395.01 | -0.873237 | 1.718000e-67 | 7.402542e-64 |
| MsG0180000669.01 | MsG0280009395.01 | -0.838363 | 3.007459e-57 | 4.018793e-54 |
| MsG0180000679.01 | MsG0280009395.01 | -0.847666 | 1.000680e-59 | 1.791731e-56 |
| MsG0180000703.01 | MsG0280009395.01 | -0.807043 | 6.129862e-50 | 3.379317e-47 |
| MsG0180000777.01 | MsG0280009395.01 | -0.820928 | 5.292923e-53 | 4.245566e-50 |
| MsG0180001063.01 | MsG0280009395.01 | -0.828082 | 1.095691e-54 | 1.077847e-51 |
| MsG0180001141.01 | MsG0280009395.01 | -0.853083 | 3.021297e-61 | 6.450314e-58 |
| MsG0180001213.01 | MsG0280009395.01 | -0.809030 | 2.314747e-50 | 1.344281e-47 |
| MsG0180001663.01 | MsG0280009395.01 | -0.838528 | 2.725893e-57 | 3.661111e-54 |
| MsG0180001886.01 | MsG0280009395.01 | -0.809304 | 2.021803e-50 | 1.182828e-47 |
| MsG0180002458.01 | MsG0280009395.01 | -0.802456 | 5.561254e-49 | 2.725472e-46 |
| MsG0180002482.01 | MsG0280009395.01 | -0.819482 | 1.135072e-52 | 8.745709e-50 |
| MsG0180002489.01 | MsG0280009395.01 | -0.812141 | 4.922934e-51 | 3.105127e-48 |
| MsG0180002750.01 | MsG0280009395.01 | 0.833239 | 5.977935e-56 | 6.843419e-53 |
| MsG0180002940.01 | MsG0280009395.01 | 0.837291 | 5.669306e-57 | 7.330529e-54 |
| MsG0180003510.01 | MsG0280009395.01 | -0.807690 | 4.469412e-50 | 2.505679e-47 |
| MsG0180003669.01 | MsG0280009395.01 | -0.805227 | 1.477739e-49 | 7.775587e-47 |
| MsG0180003671.01 | MsG0280009395.01 | -0.800848 | 1.188588e-48 | 5.592418e-46 |
| MsG0180003673.01 | MsG0280009395.01 | -0.800920 | 1.149131e-48 | 5.416723e-46 |
| MsG0180003854.01 | MsG0280009395.01 | -0.833943 | 3.988532e-56 | 4.663967e-53 |
| MsG0180003864.01 | MsG0280009395.01 | -0.838243 | 3.228757e-57 | 4.298414e-54 |
| MsG0180003952.01 | MsG0280009395.01 | -0.847031 | 1.495036e-59 | 2.622793e-56 |
| MsG0180004257.01 | MsG0280009395.01 | 0.831371 | 1.733543e-55 | 1.877478e-52 |
| MsG0180004449.01 | MsG0280009395.01 | -0.807605 | 4.658228e-50 | 2.605726e-47 |
| MsG0180004465.01 | MsG0280009395.01 | -0.801714 | 7.905351e-49 | 3.801597e-46 |
| MsG0180004599.01 | MsG0280009395.01 | -0.800939 | 1.138808e-48 | 5.370687e-46 |
| MsG0180004600.01 | MsG0280009395.01 | -0.804856 | 1.766964e-49 | 9.210034e-47 |
| MsG0180004765.01 | MsG0280009395.01 | -0.806510 | 7.941845e-50 | 4.318598e-47 |
| MsG0180004824.01 | MsG0280009395.01 | -0.818748 | 1.667337e-52 | 1.258774e-49 |
| MsG0180004886.01 | MsG0280009395.01 | 0.811692 | 6.164290e-51 | 3.841211e-48 |
| MsG0180004926.01 | MsG0280009395.01 | -0.843000 | 1.833949e-58 | 2.829521e-55 |
| MsG0180005050.01 | MsG0280009395.01 | -0.856301 | 3.529149e-62 | 8.384135e-59 |
| MsG0180005250.01 | MsG0280009395.01 | -0.808620 | 2.832111e-50 | 1.626928e-47 |
| MsG0180005668.01 | MsG0280009395.01 | -0.831107 | 2.013500e-55 | 2.163550e-52 |
| MsG0180005842.01 | MsG0280009395.01 | -0.817452 | 3.274085e-52 | 2.385375e-49 |
| MsG0180005881.01 | MsG0280009395.01 | 0.863674 | 2.103385e-64 | 6.429755e-61 |
| MsG0180005960.01 | MsG0280009395.01 | -0.823496 | 1.342567e-53 | 1.157936e-50 |
| MsG0180005993.01 | MsG0280009395.01 | -0.845190 | 4.739530e-59 | 7.835375e-56 |
| MsG0180006016.01 | MsG0280009395.01 | -0.831902 | 1.283069e-55 | 1.411794e-52 |
| MsG0180006138.01 | MsG0280009395.01 | -0.844967 | 5.445203e-59 | 8.938931e-56 |
| MsG0180006220.01 | MsG0280009395.01 | -0.814866 | 1.238504e-51 | 8.406442e-49 |
| MsG0180006261.01 | MsG0280009395.01 | -0.818071 | 2.372774e-52 | 1.758178e-49 |
| MsG0280006406.01 | MsG0280009395.01 | -0.812889 | 3.377980e-51 | 2.173448e-48 |
| MsG0280006407.01 | MsG0280009395.01 | -0.802322 | 5.927579e-49 | 2.895209e-46 |
| MsG0280006411.01 | MsG0280009395.01 | -0.844442 | 7.541501e-59 | 1.217590e-55 |
| MsG0280006593.01 | MsG0280009395.01 | -0.844266 | 8.410984e-59 | 1.350542e-55 |
| MsG0280006595.01 | MsG0280009395.01 | -0.826793 | 2.231934e-54 | 2.114440e-51 |
| MsG0280006678.01 | MsG0280009395.01 | -0.817093 | 3.943195e-52 | 2.844589e-49 |
| MsG0280006708.01 | MsG0280009395.01 | -0.851666 | 7.647022e-61 | 1.559145e-57 |
| MsG0280007058.01 | MsG0280009395.01 | 0.834977 | 2.193338e-56 | 2.645430e-53 |
| MsG0280007088.01 | MsG0280009395.01 | -0.853471 | 2.338024e-61 | 5.057443e-58 |
| MsG0280007311.01 | MsG0280009395.01 | -0.819390 | 1.191344e-52 | 9.154799e-50 |
| MsG0280007547.01 | MsG0280009395.01 | -0.820106 | 8.172722e-53 | 6.408448e-50 |
| MsG0280007636.01 | MsG0280009395.01 | -0.820642 | 6.157869e-53 | 4.899619e-50 |
| MsG0280007727.01 | MsG0280009395.01 | -0.809251 | 2.074778e-50 | 1.212154e-47 |
| MsG0280007815.01 | MsG0280009395.01 | -0.816132 | 6.474150e-52 | 4.549190e-49 |
| MsG0280008112.01 | MsG0280009395.01 | -0.806341 | 8.622992e-50 | 4.668638e-47 |
| MsG0280008613.01 | MsG0280009395.01 | -0.810597 | 1.065028e-50 | 6.447162e-48 |
| MsG0280008971.01 | MsG0280009395.01 | -0.804316 | 2.290756e-49 | 1.177388e-46 |
| MsG0280009024.01 | MsG0280009395.01 | -0.847075 | 1.454035e-59 | 2.554747e-56 |
| MsG0280009109.01 | MsG0280009395.01 | -0.812760 | 3.604333e-51 | 2.311176e-48 |
| MsG0280009235.01 | MsG0280009395.01 | -0.803316 | 3.695494e-49 | 1.851175e-46 |
| MsG0280009350.01 | MsG0280009395.01 | -0.801176 | 1.018839e-48 | 4.833570e-46 |
| MsG0280009395.01 | MsG0280009578.01 | -0.814546 | 1.458165e-51 | 9.812836e-49 |
| MsG0280009395.01 | MsG0280009637.01 | 0.807607 | 4.653406e-50 | 2.603205e-47 |
| MsG0280009395.01 | MsG0280010013.01 | -0.801794 | 7.609922e-49 | 3.667087e-46 |
| MsG0280009395.01 | MsG0280010154.01 | -0.809836 | 1.554065e-50 | 9.221244e-48 |
| MsG0280009395.01 | MsG0280010204.01 | -0.804579 | 2.018625e-49 | 1.044600e-46 |
| MsG0280009395.01 | MsG0280010233.01 | -0.810741 | 9.911380e-51 | 6.023137e-48 |
| MsG0280009395.01 | MsG0280010434.01 | -0.814413 | 1.560576e-51 | 1.046482e-48 |
| MsG0280009395.01 | MsG0280010443.01 | -0.823475 | 1.357906e-53 | 1.170402e-50 |
| MsG0280009395.01 | MsG0280010722.01 | -0.837461 | 5.128450e-57 | 6.666503e-54 |
| MsG0280009395.01 | MsG0280010980.01 | -0.803952 | 2.727181e-49 | 1.388760e-46 |
| MsG0280009395.01 | MsG0280011059.01 | 0.826473 | 2.660758e-54 | 2.497706e-51 |
| MsG0280009395.01 | MsG0280011109.01 | -0.822488 | 2.305831e-53 | 1.932789e-50 |
| MsG0280009395.01 | MsG0280011141.01 | -0.848374 | 6.384230e-60 | 1.169172e-56 |
| MsG0280009395.01 | MsG0280011156.01 | -0.810393 | 1.178634e-50 | 7.095958e-48 |
| MsG0280009395.01 | MsG0280011175.01 | -0.846591 | 1.973375e-59 | 3.413408e-56 |
| MsG0280009395.01 | MsG0280011446.01 | -0.839875 | 1.219518e-57 | 1.706904e-54 |
| MsG0280009395.01 | MsG0380011609.01 | -0.817875 | 2.628667e-52 | 1.937395e-49 |
| MsG0280009395.01 | MsG0380011716.01 | -0.802783 | 4.762569e-49 | 2.353609e-46 |
| MsG0280009395.01 | MsG0380011895.01 | -0.862982 | 3.443836e-64 | 1.027687e-60 |
| MsG0280009395.01 | MsG0380012460.01 | -0.812060 | 5.126253e-51 | 3.226057e-48 |
| MsG0280009395.01 | MsG0380014173.01 | -0.833515 | 5.102200e-56 | 5.889631e-53 |
| MsG0280009395.01 | MsG0380014225.01 | 0.830153 | 3.446586e-55 | 3.601590e-52 |
| MsG0280009395.01 | MsG0380014248.01 | -0.850705 | 1.428396e-60 | 2.822488e-57 |
| MsG0280009395.01 | MsG0380014277.01 | -0.809223 | 2.104393e-50 | 1.228513e-47 |
| MsG0280009395.01 | MsG0380014296.01 | -0.834567 | 2.782451e-56 | 3.314916e-53 |
| MsG0280009395.01 | MsG0380014647.01 | -0.807366 | 5.236279e-50 | 2.910993e-47 |
| MsG0280009395.01 | MsG0380014770.01 | -0.895944 | 5.920999e-76 | 6.268506e-72 |
| MsG0280009395.01 | MsG0380015164.01 | -0.852162 | 5.530081e-61 | 1.145449e-57 |
| MsG0280009395.01 | MsG0380015166.01 | -0.808182 | 3.510949e-50 | 1.994120e-47 |
| MsG0280009395.01 | MsG0380015212.01 | 0.826614 | 2.462465e-54 | 2.320948e-51 |
| MsG0280009395.01 | MsG0380015497.01 | -0.807608 | 4.652614e-50 | 2.602785e-47 |
| MsG0280009395.01 | MsG0380015555.01 | -0.813365 | 2.656085e-51 | 1.731140e-48 |
| MsG0280009395.01 | MsG0380015818.01 | -0.807029 | 6.172164e-50 | 3.401405e-47 |
| MsG0280009395.01 | MsG0380015849.01 | 0.823112 | 1.650685e-53 | 1.408339e-50 |
| MsG0280009395.01 | MsG0380016064.01 | -0.801386 | 9.225629e-49 | 4.400100e-46 |
| MsG0280009395.01 | MsG0380016133.01 | -0.817909 | 2.582091e-52 | 1.904801e-49 |
| MsG0280009395.01 | MsG0380016182.01 | -0.801591 | 8.375998e-49 | 4.015419e-46 |
| MsG0280009395.01 | MsG0380016285.01 | -0.804919 | 1.714356e-49 | 8.950431e-47 |
| MsG0280009395.01 | MsG0380016581.01 | -0.848292 | 6.724490e-60 | 1.228305e-56 |
| MsG0280009395.01 | MsG0380016624.01 | -0.838458 | 2.842149e-57 | 3.809245e-54 |
| MsG0280009395.01 | MsG0380016828.01 | 0.853751 | 1.943079e-61 | 4.242095e-58 |
| MsG0280009395.01 | MsG0380016859.01 | -0.813899 | 2.026400e-51 | 1.339969e-48 |
| MsG0280009395.01 | MsG0380016910.01 | -0.806632 | 7.486688e-50 | 4.083466e-47 |
| MsG0280009395.01 | MsG0380017140.01 | -0.808741 | 2.667854e-50 | 1.537459e-47 |
| MsG0280009395.01 | MsG0380017238.01 | -0.829468 | 5.061135e-55 | 5.184414e-52 |
| MsG0280009395.01 | MsG0380017429.01 | -0.829794 | 4.215983e-55 | 4.360769e-52 |
| MsG0280009395.01 | MsG0380017495.01 | -0.806406 | 8.353194e-50 | 4.530119e-47 |
| MsG0280009395.01 | MsG0380017543.01 | -0.832432 | 9.486546e-56 | 1.060098e-52 |
| MsG0280009395.01 | MsG0380017551.01 | 0.878513 | 2.643378e-69 | 1.384352e-65 |
| MsG0280009395.01 | MsG0380017680.01 | -0.882524 | 9.690961e-71 | 5.922227e-67 |
| MsG0280009395.01 | MsG0380017736.01 | 0.810631 | 1.047232e-50 | 6.345183e-48 |
| MsG0280009395.01 | MsG0480018163.01 | -0.835627 | 1.503083e-56 | 1.848372e-53 |
| MsG0280009395.01 | MsG0480018236.01 | -0.810323 | 1.220265e-50 | 7.333244e-48 |
| MsG0280009395.01 | MsG0480018425.01 | -0.804671 | 1.931632e-49 | 1.001949e-46 |
| MsG0280009395.01 | MsG0480018660.01 | -0.801248 | 9.849555e-49 | 4.681289e-46 |
| MsG0280009395.01 | MsG0480018883.01 | -0.835960 | 1.237974e-56 | 1.537673e-53 |
| MsG0280009395.01 | MsG0480018964.01 | -0.822064 | 2.892897e-53 | 2.395429e-50 |
| MsG0280009395.01 | MsG0480018970.01 | -0.829050 | 6.394479e-55 | 6.469684e-52 |
| MsG0280009395.01 | MsG0480019125.01 | -0.832927 | 7.149455e-56 | 8.108039e-53 |
| MsG0280009395.01 | MsG0480019373.01 | -0.822087 | 2.858091e-53 | 2.368229e-50 |
| MsG0280009395.01 | MsG0480019434.01 | -0.810092 | 1.369069e-50 | 8.177647e-48 |
| MsG0280009395.01 | MsG0480019970.01 | -0.810838 | 9.443929e-51 | 5.754076e-48 |
| MsG0280009395.01 | MsG0480020090.01 | -0.809808 | 1.575541e-50 | 9.341797e-48 |
| MsG0280009395.01 | MsG0480020136.01 | -0.804813 | 1.803899e-49 | 9.392018e-47 |
| MsG0280009395.01 | MsG0480020447.01 | -0.811125 | 8.184769e-51 | 5.024740e-48 |
| MsG0280009395.01 | MsG0480020874.01 | -0.808135 | 3.594087e-50 | 2.038712e-47 |
| MsG0280009395.01 | MsG0480021041.01 | -0.819021 | 1.445177e-52 | 1.099428e-49 |
| MsG0280009395.01 | MsG0480021061.01 | -0.816905 | 4.344849e-52 | 3.118314e-49 |
| MsG0280009395.01 | MsG0480021164.01 | -0.845788 | 3.263279e-59 | 5.500813e-56 |
| MsG0280009395.01 | MsG0480021215.01 | -0.849835 | 2.505214e-60 | 4.811028e-57 |
| MsG0280009395.01 | MsG0480021274.01 | -0.834049 | 3.751634e-56 | 4.400447e-53 |
| MsG0280009395.01 | MsG0480021465.01 | -0.833206 | 6.091258e-56 | 6.966427e-53 |
| MsG0280009395.01 | MsG0480021558.01 | -0.805885 | 1.075649e-49 | 5.756535e-47 |
| MsG0280009395.01 | MsG0480021750.01 | -0.830805 | 2.388464e-55 | 2.543780e-52 |
| MsG0280009395.01 | MsG0480021853.01 | -0.815092 | 1.103773e-51 | 7.537687e-49 |
| MsG0280009395.01 | MsG0480021953.01 | -0.835826 | 1.338397e-56 | 1.655789e-53 |
| MsG0280009395.01 | MsG0480021959.01 | -0.863926 | 1.756391e-64 | 5.416292e-61 |
| MsG0280009395.01 | MsG0480021994.01 | -0.879080 | 1.668805e-69 | 8.925971e-66 |
| MsG0280009395.01 | MsG0480022052.01 | 0.860898 | 1.498020e-63 | 4.159874e-60 |
| MsG0280009395.01 | MsG0480022164.01 | -0.812056 | 5.135985e-51 | 3.231873e-48 |
| MsG0280009395.01 | MsG0480022222.01 | -0.855900 | 4.625938e-62 | 1.084487e-58 |
| MsG0280009395.01 | MsG0480022259.01 | -0.800268 | 1.560951e-48 | 7.236942e-46 |
| MsG0280009395.01 | MsG0480022467.01 | -0.805105 | 1.567178e-49 | 8.220637e-47 |
| MsG0280009395.01 | MsG0480022615.01 | 0.804745 | 1.863852e-49 | 9.687300e-47 |
| MsG0280009395.01 | MsG0480022768.01 | -0.826667 | 2.391932e-54 | 2.257919e-51 |
| MsG0280009395.01 | MsG0480022791.01 | -0.815854 | 7.468971e-52 | 5.208229e-49 |
| MsG0280009395.01 | MsG0480022795.01 | -0.826653 | 2.410210e-54 | 2.274203e-51 |
| MsG0280009395.01 | MsG0480022851.01 | -0.819590 | 1.072114e-52 | 8.285560e-50 |
| MsG0280009395.01 | MsG0480022933.01 | -0.824459 | 7.978459e-54 | 7.070819e-51 |
| MsG0280009395.01 | MsG0480022985.01 | -0.858015 | 1.100521e-62 | 2.769389e-59 |
| MsG0280009395.01 | MsG0480023014.01 | -0.824040 | 1.001088e-53 | 8.766706e-51 |
| MsG0280009395.01 | MsG0480023088.01 | -0.817053 | 4.026287e-52 | 2.901434e-49 |
| MsG0280009395.01 | MsG0480023174.01 | -0.801343 | 9.415038e-49 | 4.485568e-46 |
| MsG0280009395.01 | MsG0480023412.01 | -0.806760 | 7.033295e-50 | 3.849006e-47 |
| MsG0280009395.01 | MsG0480023415.01 | -0.821469 | 3.970579e-53 | 3.232996e-50 |
| MsG0280009395.01 | MsG0480023636.01 | -0.806623 | 7.518841e-50 | 4.100098e-47 |
| MsG0280009395.01 | MsG0480023707.01 | -0.805967 | 1.033730e-49 | 5.543897e-47 |
| MsG0280009395.01 | MsG0480023943.01 | -0.809660 | 1.695087e-50 | 1.001184e-47 |
| MsG0280009395.01 | MsG0480023994.01 | -0.849044 | 4.162379e-60 | 7.791024e-57 |
| MsG0280009395.01 | MsG0480024005.01 | -0.803111 | 4.073133e-49 | 2.029661e-46 |
| MsG0280009395.01 | MsG0580024114.01 | -0.817794 | 2.740623e-52 | 2.015501e-49 |
| MsG0280009395.01 | MsG0580024166.01 | -0.818564 | 1.834906e-52 | 1.378268e-49 |
| MsG0280009395.01 | MsG0580024390.01 | -0.827751 | 1.316222e-54 | 1.282243e-51 |
| MsG0280009395.01 | MsG0580024472.01 | -0.807654 | 4.547165e-50 | 2.546917e-47 |
| MsG0280009395.01 | MsG0580024552.01 | -0.811915 | 5.512652e-51 | 3.455555e-48 |
| MsG0280009395.01 | MsG0580025026.01 | -0.827192 | 1.791458e-54 | 1.717211e-51 |
| MsG0280009395.01 | MsG0580025134.01 | -0.801274 | 9.727548e-49 | 4.626416e-46 |
| MsG0280009395.01 | MsG0580025182.01 | 0.837730 | 4.373791e-57 | 5.733448e-54 |
| MsG0280009395.01 | MsG0580025448.01 | -0.851716 | 7.405046e-61 | 1.512262e-57 |
| MsG0280009395.01 | MsG0580025638.01 | -0.824251 | 8.933417e-54 | 7.870171e-51 |
| MsG0280009395.01 | MsG0580026023.01 | -0.810406 | 1.171046e-50 | 7.052623e-48 |
| MsG0280009395.01 | MsG0580026086.01 | -0.812430 | 4.256418e-51 | 2.705890e-48 |
| MsG0280009395.01 | MsG0580026340.01 | -0.816328 | 5.851235e-52 | 4.133940e-49 |
| MsG0280009395.01 | MsG0580026439.01 | -0.802474 | 5.514191e-49 | 2.703606e-46 |
| MsG0280009395.01 | MsG0580026777.01 | -0.810326 | 1.218785e-50 | 7.324800e-48 |
| MsG0280009395.01 | MsG0580027034.01 | -0.811549 | 6.623699e-51 | 4.112098e-48 |
| MsG0280009395.01 | MsG0580027766.01 | -0.812091 | 5.046927e-51 | 3.178972e-48 |
| MsG0280009395.01 | MsG0580028901.01 | -0.814377 | 1.589543e-51 | 1.064820e-48 |
| MsG0280009395.01 | MsG0580028996.01 | -0.802886 | 4.534238e-49 | 2.246623e-46 |
| MsG0280009395.01 | MsG0580029008.01 | -0.803824 | 2.898829e-49 | 1.471266e-46 |
| MsG0280009395.01 | MsG0580029514.01 | 0.815632 | 8.370013e-52 | 5.801869e-49 |
| MsG0280009395.01 | MsG0580029594.01 | -0.804182 | 2.441872e-49 | 1.250772e-46 |
| MsG0280009395.01 | MsG0580029762.01 | -0.816849 | 4.474237e-52 | 3.206187e-49 |
| MsG0280009395.01 | MsG0580029826.01 | -0.818192 | 2.227971e-52 | 1.656437e-49 |
| MsG0280009395.01 | MsG0580029952.01 | -0.845876 | 3.088235e-59 | 5.220542e-56 |
| MsG0280009395.01 | MsG0580029999.01 | 0.862965 | 3.487286e-64 | 1.040100e-60 |
| MsG0280009395.01 | MsG0580030235.01 | -0.800807 | 1.212039e-48 | 5.696457e-46 |
| MsG0280009395.01 | MsG0680030320.01 | -0.812617 | 3.874241e-51 | 2.474993e-48 |
| MsG0280009395.01 | MsG0680030413.01 | -0.818035 | 2.418318e-52 | 1.790128e-49 |
| MsG0280009395.01 | MsG0680030415.01 | -0.847035 | 1.491477e-59 | 2.616908e-56 |
| MsG0280009395.01 | MsG0680031262.01 | -0.801865 | 7.360292e-49 | 3.553293e-46 |
| MsG0280009395.01 | MsG0680031334.01 | -0.812974 | 3.236796e-51 | 2.087231e-48 |
| MsG0280009395.01 | MsG0680031446.01 | 0.829288 | 5.597399e-55 | 5.704815e-52 |
| MsG0280009395.01 | MsG0680031538.01 | -0.813035 | 3.138122e-51 | 2.026989e-48 |
| MsG0280009395.01 | MsG0680031646.01 | -0.821548 | 3.807416e-53 | 3.107150e-50 |
| MsG0280009395.01 | MsG0680031651.01 | -0.801060 | 1.075973e-48 | 5.089957e-46 |
| MsG0280009395.01 | MsG0680032460.01 | 0.810350 | 1.204354e-50 | 7.242649e-48 |
| MsG0280009395.01 | MsG0680034037.01 | -0.811169 | 8.008044e-51 | 4.921868e-48 |
| MsG0280009395.01 | MsG0680034219.01 | -0.819349 | 1.217234e-52 | 9.342607e-50 |
| MsG0280009395.01 | MsG0680035704.01 | -0.815519 | 8.869405e-52 | 6.128880e-49 |
| MsG0280009395.01 | MsG0780035948.01 | -0.810645 | 1.039882e-50 | 6.302953e-48 |
| MsG0280009395.01 | MsG0780036139.01 | -0.801526 | 8.637458e-49 | 4.134124e-46 |
| MsG0280009395.01 | MsG0780036184.01 | 0.824142 | 9.473795e-54 | 8.321088e-51 |
| MsG0280009395.01 | MsG0780037082.01 | -0.820269 | 7.499333e-53 | 5.906122e-50 |
| MsG0280009395.01 | MsG0780037284.01 | 0.815099 | 1.099517e-51 | 7.510034e-49 |
| MsG0280009395.01 | MsG0780037512.01 | -0.835997 | 1.211018e-56 | 1.505988e-53 |
| MsG0280009395.01 | MsG0780038906.01 | -0.838129 | 3.453787e-57 | 4.582237e-54 |
| MsG0280009395.01 | MsG0780039143.01 | -0.844360 | 7.932171e-59 | 1.277398e-55 |
| MsG0280009395.01 | MsG0780039144.01 | -0.877801 | 4.694085e-69 | 2.392198e-65 |
| MsG0280009395.01 | MsG0780039243.01 | -0.801953 | 7.059664e-49 | 3.415577e-46 |
| MsG0280009395.01 | MsG0780039867.01 | 0.833316 | 5.720177e-56 | 6.563817e-53 |
| MsG0280009395.01 | MsG0780040262.01 | -0.820697 | 5.979956e-53 | 4.765672e-50 |
| MsG0280009395.01 | MsG0780040445.01 | -0.826424 | 2.733197e-54 | 2.562313e-51 |
| MsG0280009395.01 | MsG0780040579.01 | 0.809211 | 2.116464e-50 | 1.235173e-47 |
| MsG0280009395.01 | MsG0780040712.01 | -0.818842 | 1.586979e-52 | 1.201291e-49 |
| MsG0280009395.01 | MsG0780040726.01 | -0.804696 | 1.908472e-49 | 9.905987e-47 |
| MsG0280009395.01 | MsG0780040749.01 | -0.808836 | 2.546633e-50 | 1.471270e-47 |
| MsG0280009395.01 | MsG0780040861.01 | -0.805522 | 1.281687e-49 | 6.795248e-47 |
| MsG0280009395.01 | MsG0780040866.01 | 0.819890 | 9.156996e-53 | 7.136224e-50 |
| MsG0280009395.01 | MsG0780041015.01 | 0.865330 | 6.385846e-65 | 2.069536e-61 |
| MsG0280009395.01 | MsG0780041101.01 | -0.818868 | 1.565360e-52 | 1.185778e-49 |
| MsG0280009395.01 | MsG0780041149.01 | 0.800921 | 1.148655e-48 | 5.414578e-46 |
| MsG0280009395.01 | MsG0780041294.01 | -0.814381 | 1.586093e-51 | 1.062654e-48 |
| MsG0280009395.01 | MsG0780041345.01 | -0.803628 | 3.183681e-49 | 1.607695e-46 |
| MsG0280009395.01 | MsG0780041456.01 | -0.828346 | 9.461063e-55 | 9.378313e-52 |
| MsG0280009395.01 | MsG0780041507.01 | -0.881407 | 2.462835e-70 | 1.440967e-66 |
| MsG0280009395.01 | MsG0880042108.01 | -0.836713 | 7.965339e-57 | 1.012117e-53 |
| MsG0280009395.01 | MsG0880042294.01 | -0.861569 | 9.357825e-64 | 2.659610e-60 |
| MsG0280009395.01 | MsG0880042314.01 | -0.825513 | 4.498952e-54 | 4.109361e-51 |
| MsG0280009395.01 | MsG0880042404.01 | -0.828598 | 8.226269e-55 | 8.214627e-52 |
| MsG0280009395.01 | MsG0880042518.01 | -0.818275 | 2.133521e-52 | 1.589781e-49 |
| MsG0280009395.01 | MsG0880042698.01 | -0.812508 | 4.091837e-51 | 2.606579e-48 |
| MsG0280009395.01 | MsG0880042972.01 | -0.824230 | 9.032655e-54 | 7.953372e-51 |
| MsG0280009395.01 | MsG0880043059.01 | -0.807806 | 4.223070e-50 | 2.374774e-47 |
| MsG0280009395.01 | MsG0880043172.01 | -0.824049 | 9.963303e-54 | 8.727356e-51 |
| MsG0280009395.01 | MsG0880043454.01 | -0.840174 | 1.019410e-57 | 1.440332e-54 |
| MsG0280009395.01 | MsG0880043509.01 | -0.821918 | 3.127548e-53 | 2.579167e-50 |
| MsG0280009395.01 | MsG0880044062.01 | 0.847650 | 1.011307e-59 | 1.809848e-56 |
| MsG0280009395.01 | MsG0880044394.01 | -0.825104 | 5.621819e-54 | 5.075830e-51 |
| MsG0280009395.01 | MsG0880044455.01 | 0.883447 | 4.451493e-71 | 2.822755e-67 |
| MsG0280009395.01 | MsG0880044574.01 | -0.827952 | 1.177206e-54 | 1.153679e-51 |
| MsG0280009395.01 | MsG0880044728.01 | -0.825053 | 5.781960e-54 | 5.212893e-51 |
| MsG0280009395.01 | MsG0880045111.01 | -0.809583 | 1.761525e-50 | 1.038280e-47 |
| MsG0280009395.01 | MsG0880045133.01 | -0.804633 | 1.966816e-49 | 1.019188e-46 |
| MsG0280009395.01 | MsG0880045362.01 | -0.815804 | 7.662558e-52 | 5.336329e-49 |
| MsG0280009395.01 | MsG0880045535.01 | -0.814400 | 1.570614e-51 | 1.052829e-48 |
| MsG0280009395.01 | MsG0880045555.01 | 0.864248 | 1.394065e-64 | 4.347894e-61 |
| MsG0280009395.01 | MsG0880045613.01 | -0.815197 | 1.045769e-51 | 7.162163e-49 |
| MsG0280009395.01 | MsG0880045736.01 | -0.850102 | 2.109510e-60 | 4.086962e-57 |
| MsG0280009395.01 | MsG0880045869.01 | -0.802916 | 4.469505e-49 | 2.216250e-46 |
| MsG0280009395.01 | MsG0880045896.01 | -0.810404 | 1.172374e-50 | 7.060189e-48 |
| MsG0280009395.01 | MsG0880045937.01 | -0.873552 | 1.346246e-67 | 5.867028e-64 |
| MsG0280009395.01 | MsG0880046058.01 | -0.807657 | 4.541003e-50 | 2.543674e-47 |
| MsG0280009395.01 | MsG0880046244.01 | -0.806856 | 6.713213e-50 | 3.683167e-47 |
| MsG0280009395.01 | MsG0880046285.01 | -0.846414 | 2.205325e-59 | 3.793087e-56 |
| MsG0280009395.01 | MsG0880046321.01 | -0.820614 | 6.248347e-53 | 4.967970e-50 |
| MsG0280009395.01 | MsG0880046384.01 | 0.806063 | 9.868979e-50 | 5.305677e-47 |
| MsG0280009395.01 | MsG0880046458.01 | -0.838509 | 2.757487e-57 | 3.701256e-54 |
| MsG0280009395.01 | MsG0880046963.01 | 0.828325 | 9.574245e-55 | 9.484586e-52 |
| MsG0280009395.01 | MsG0880046973.01 | -0.809803 | 1.579318e-50 | 9.363237e-48 |
| MsG0280009395.01 | MsG0880047019.01 | -0.802517 | 5.403274e-49 | 2.652030e-46 |
| MsG0280009395.01 | MsG0880047052.01 | -0.831036 | 2.095669e-55 | 2.247125e-52 |
| MsG0280009395.01 | MsG0880047116.01 | -0.831687 | 1.449023e-55 | 1.584195e-52 |
| MsG0280009395.01 | MsG0880047427.01 | -0.823047 | 1.708839e-53 | 1.455315e-50 |
| MsG0280009395.01 | MsG0880047689.01 | 0.818864 | 1.569304e-52 | 1.188631e-49 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009395.01.T01 | MTR_2g061790 | 91.444 | 187 | 11 | 2 | 1 | 186 | 48 | 230 | 9.96e-96 | 277 |
| MsG0280009395.01.T01 | MTR_1g095030 | 52.941 | 119 | 39 | 4 | 68 | 184 | 19 | 122 | 1.28e-26 | 98.6 |
| MsG0280009395.01.T01 | MTR_1g114320 | 34.437 | 151 | 92 | 2 | 28 | 178 | 166 | 309 | 1.25e-20 | 87.4 |
| MsG0280009395.01.T01 | MTR_7g074170 | 36.000 | 100 | 59 | 1 | 29 | 128 | 318 | 412 | 9.45e-20 | 86.3 |
| MsG0280009395.01.T01 | MTR_4g110100 | 46.429 | 84 | 40 | 1 | 29 | 112 | 333 | 411 | 1.19e-19 | 85.5 |
| MsG0280009395.01.T01 | MTR_2g097620 | 40.860 | 93 | 46 | 2 | 29 | 121 | 163 | 246 | 1.52e-18 | 82.0 |
| MsG0280009395.01.T01 | MTR_6g079660 | 43.529 | 85 | 43 | 1 | 28 | 112 | 207 | 286 | 1.82e-18 | 82.0 |
| MsG0280009395.01.T01 | MTR_1g114620 | 44.318 | 88 | 41 | 1 | 28 | 115 | 239 | 318 | 2.03e-18 | 81.6 |
| MsG0280009395.01.T01 | MTR_4g064570 | 44.000 | 75 | 36 | 1 | 28 | 102 | 154 | 222 | 9.07e-17 | 77.4 |
| MsG0280009395.01.T01 | MTR_6g016350 | 53.704 | 54 | 25 | 0 | 59 | 112 | 309 | 362 | 2.86e-16 | 75.9 |
| MsG0280009395.01.T01 | MTR_5g088720 | 41.892 | 74 | 37 | 1 | 29 | 102 | 174 | 241 | 3.50e-15 | 72.4 |
| MsG0280009395.01.T01 | MTR_5g088720 | 41.892 | 74 | 37 | 1 | 29 | 102 | 179 | 246 | 3.62e-15 | 72.4 |
| MsG0280009395.01.T01 | MTR_5g088720 | 41.892 | 74 | 37 | 1 | 29 | 102 | 220 | 287 | 4.33e-15 | 72.4 |
| MsG0280009395.01.T01 | MTR_3g072630 | 38.947 | 95 | 45 | 3 | 15 | 102 | 174 | 262 | 9.60e-15 | 71.2 |
| MsG0280009395.01.T01 | MTR_3g083480 | 37.805 | 82 | 40 | 1 | 28 | 109 | 215 | 285 | 9.90e-15 | 71.2 |
| MsG0280009395.01.T01 | MTR_2g007340 | 39.796 | 98 | 50 | 3 | 8 | 102 | 151 | 242 | 1.34e-14 | 70.9 |
| MsG0280009395.01.T01 | MTR_3g072630 | 38.947 | 95 | 45 | 3 | 15 | 102 | 174 | 262 | 1.49e-14 | 70.9 |
| MsG0280009395.01.T01 | MTR_5g080350 | 34.783 | 92 | 53 | 2 | 29 | 120 | 168 | 252 | 7.34e-14 | 68.9 |
| MsG0280009395.01.T01 | MTR_3g068005 | 35.294 | 85 | 49 | 1 | 29 | 113 | 170 | 248 | 4.94e-13 | 66.6 |
| MsG0280009395.01.T01 | MTR_1g014710 | 32.500 | 80 | 51 | 1 | 29 | 108 | 204 | 280 | 6.20e-13 | 66.2 |
| MsG0280009395.01.T01 | MTR_6g032960 | 29.825 | 114 | 62 | 2 | 6 | 112 | 185 | 287 | 7.75e-12 | 63.2 |
| MsG0280009395.01.T01 | MTR_1g051105 | 36.486 | 74 | 41 | 2 | 29 | 102 | 133 | 200 | 8.06e-12 | 62.4 |
| MsG0280009395.01.T01 | MTR_0067s0100 | 35.616 | 73 | 41 | 1 | 30 | 102 | 165 | 231 | 2.12e-11 | 61.6 |
| MsG0280009395.01.T01 | MTR_1g011380 | 39.655 | 58 | 35 | 0 | 60 | 117 | 340 | 397 | 6.67e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280009395.01.T01 | AT3G60080 | 39.316 | 117 | 52 | 3 | 38 | 143 | 144 | 252 | 4.35e-18 | 80.5 |
| MsG0280009395.01.T01 | AT5G01980 | 41.304 | 92 | 48 | 2 | 28 | 119 | 323 | 408 | 7.22e-17 | 77.8 |
| MsG0280009395.01.T01 | AT5G15820 | 44.000 | 75 | 37 | 1 | 28 | 102 | 263 | 332 | 9.84e-17 | 77.0 |
| MsG0280009395.01.T01 | AT3G56580 | 44.595 | 74 | 36 | 1 | 29 | 102 | 159 | 227 | 1.96e-16 | 75.9 |
| MsG0280009395.01.T01 | AT3G56580 | 44.595 | 74 | 36 | 1 | 29 | 102 | 159 | 227 | 1.96e-16 | 75.9 |
| MsG0280009395.01.T01 | AT3G56580 | 44.595 | 74 | 36 | 1 | 29 | 102 | 159 | 227 | 1.96e-16 | 75.9 |
| MsG0280009395.01.T01 | AT5G08139 | 34.783 | 92 | 50 | 2 | 16 | 102 | 264 | 350 | 4.13e-16 | 75.5 |
| MsG0280009395.01.T01 | AT2G40830 | 45.946 | 74 | 35 | 2 | 29 | 102 | 163 | 231 | 9.80e-16 | 73.9 |
| MsG0280009395.01.T01 | AT2G40830 | 45.946 | 74 | 35 | 2 | 29 | 102 | 163 | 231 | 9.80e-16 | 73.9 |
| MsG0280009395.01.T01 | AT2G40830 | 45.946 | 74 | 35 | 2 | 29 | 102 | 163 | 231 | 9.80e-16 | 73.9 |
| MsG0280009395.01.T01 | AT2G40830 | 45.946 | 74 | 35 | 2 | 29 | 102 | 163 | 231 | 9.80e-16 | 73.9 |
| MsG0280009395.01.T01 | AT5G59550 | 45.588 | 68 | 35 | 1 | 61 | 126 | 304 | 371 | 1.37e-15 | 74.3 |
| MsG0280009395.01.T01 | AT3G02340 | 41.463 | 82 | 43 | 2 | 28 | 109 | 307 | 383 | 1.38e-15 | 73.9 |
| MsG0280009395.01.T01 | AT3G02340 | 41.463 | 82 | 43 | 2 | 28 | 109 | 307 | 383 | 1.38e-15 | 73.9 |
| MsG0280009395.01.T01 | AT1G60360 | 37.037 | 108 | 57 | 2 | 29 | 130 | 197 | 299 | 1.65e-15 | 73.6 |
| MsG0280009395.01.T01 | AT5G59550 | 36.000 | 100 | 56 | 2 | 29 | 126 | 173 | 266 | 1.93e-15 | 73.6 |
| MsG0280009395.01.T01 | AT2G39720 | 43.243 | 74 | 38 | 1 | 29 | 102 | 173 | 242 | 4.72e-15 | 72.4 |
| MsG0280009395.01.T01 | AT2G39720 | 43.243 | 74 | 38 | 1 | 29 | 102 | 173 | 242 | 4.72e-15 | 72.4 |
| MsG0280009395.01.T01 | AT3G19950 | 36.364 | 88 | 51 | 1 | 28 | 115 | 188 | 270 | 5.24e-15 | 72.0 |
| MsG0280009395.01.T01 | AT3G19950 | 36.782 | 87 | 50 | 1 | 28 | 114 | 246 | 327 | 5.54e-15 | 72.4 |
| MsG0280009395.01.T01 | AT3G19950 | 36.782 | 87 | 50 | 1 | 28 | 114 | 246 | 327 | 5.54e-15 | 72.4 |
| MsG0280009395.01.T01 | AT3G46620 | 33.673 | 98 | 59 | 1 | 29 | 126 | 189 | 280 | 8.39e-15 | 72.0 |
| MsG0280009395.01.T01 | AT2G44330 | 44.615 | 65 | 36 | 0 | 38 | 102 | 73 | 137 | 3.57e-14 | 67.8 |
| MsG0280009395.01.T01 | AT1G55530 | 37.805 | 82 | 40 | 1 | 28 | 109 | 201 | 271 | 4.03e-14 | 69.7 |
| MsG0280009395.01.T01 | AT1G55530 | 37.805 | 82 | 40 | 1 | 28 | 109 | 201 | 271 | 4.03e-14 | 69.7 |
| MsG0280009395.01.T01 | AT1G55530 | 37.805 | 82 | 40 | 1 | 28 | 109 | 168 | 238 | 4.28e-14 | 69.3 |
| MsG0280009395.01.T01 | AT5G64920 | 47.458 | 59 | 31 | 0 | 58 | 116 | 254 | 312 | 4.65e-14 | 69.3 |
| MsG0280009395.01.T01 | AT3G30460 | 46.939 | 49 | 26 | 0 | 57 | 105 | 129 | 177 | 7.17e-14 | 67.0 |
| MsG0280009395.01.T01 | AT3G30460 | 50.000 | 46 | 23 | 0 | 57 | 102 | 93 | 138 | 7.43e-14 | 66.2 |
| MsG0280009395.01.T01 | AT5G60820 | 38.667 | 75 | 44 | 1 | 28 | 102 | 341 | 413 | 9.49e-14 | 68.9 |
| MsG0280009395.01.T01 | AT5G56340 | 32.692 | 104 | 57 | 2 | 28 | 131 | 237 | 327 | 1.12e-13 | 68.6 |
| MsG0280009395.01.T01 | AT3G13430 | 36.000 | 75 | 38 | 1 | 28 | 102 | 202 | 266 | 6.43e-13 | 66.2 |
| MsG0280009395.01.T01 | AT3G13430 | 36.000 | 75 | 38 | 1 | 28 | 102 | 202 | 266 | 6.43e-13 | 66.2 |
| MsG0280009395.01.T01 | AT3G13430 | 36.000 | 75 | 38 | 1 | 28 | 102 | 202 | 266 | 6.43e-13 | 66.2 |
| MsG0280009395.01.T01 | AT3G13430 | 36.000 | 75 | 38 | 1 | 28 | 102 | 202 | 266 | 6.43e-13 | 66.2 |
| MsG0280009395.01.T01 | AT3G10815 | 33.735 | 83 | 49 | 2 | 29 | 111 | 95 | 171 | 9.14e-13 | 64.3 |
| MsG0280009395.01.T01 | AT4G26400 | 33.333 | 81 | 43 | 1 | 30 | 110 | 221 | 290 | 1.73e-12 | 65.1 |
| MsG0280009395.01.T01 | AT4G26400 | 33.333 | 81 | 43 | 1 | 30 | 110 | 221 | 290 | 1.73e-12 | 65.1 |
| MsG0280009395.01.T01 | AT1G68180 | 41.892 | 74 | 37 | 1 | 29 | 102 | 112 | 179 | 2.03e-12 | 63.9 |
| MsG0280009395.01.T01 | AT5G20910 | 27.679 | 112 | 64 | 2 | 28 | 125 | 200 | 308 | 5.78e-12 | 63.2 |
| MsG0280009395.01.T01 | AT4G32600 | 37.500 | 56 | 35 | 0 | 60 | 115 | 362 | 417 | 1.81e-11 | 62.4 |
| MsG0280009395.01.T01 | AT4G32600 | 37.500 | 56 | 35 | 0 | 60 | 115 | 362 | 417 | 1.81e-11 | 62.4 |
| MsG0280009395.01.T01 | AT3G55530 | 37.500 | 64 | 37 | 1 | 59 | 119 | 209 | 272 | 5.34e-11 | 60.5 |
| MsG0280009395.01.T01 | AT1G26800 | 28.421 | 95 | 68 | 0 | 26 | 120 | 78 | 172 | 8.83e-11 | 58.9 |
Find 49 sgRNAs with CRISPR-Local
Find 53 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCTTCATTCTAATGATTC+TGG | 0.212324 | 2:-51290351 | MsG0280009395.01.T01:CDS |
| ATGAAGAATCGGCGTCGTTT+TGG | 0.271107 | 2:+51290799 | None:intergenic |
| TACTGTAGGGATTGTTGTTT+CGG | 0.304144 | 2:+51290713 | None:intergenic |
| GAGCTTCTTGTCCTCTTTGT+CGG | 0.339530 | 2:-51290533 | MsG0280009395.01.T01:CDS |
| GATGAGGAAGATGATGTTAA+TGG | 0.351942 | 2:-51290477 | MsG0280009395.01.T01:CDS |
| GGCGGTGGTGGTGGTGTAGA+TGG | 0.381074 | 2:-51290291 | MsG0280009395.01.T01:CDS |
| ATTGTATTACTCCGTGGCTT+CGG | 0.399609 | 2:-51290560 | MsG0280009395.01.T01:CDS |
| AGTGAACTTGGCGGCGGTGG+TGG | 0.415179 | 2:-51290303 | MsG0280009395.01.T01:CDS |
| GAACTTGGCGGCGGTGGTGG+TGG | 0.437033 | 2:-51290300 | MsG0280009395.01.T01:CDS |
| CATTCTAATGATTCTGGTGG+TGG | 0.447523 | 2:-51290345 | MsG0280009395.01.T01:CDS |
| AGGGATTGTTGTTTCGGTGC+GGG | 0.459559 | 2:+51290719 | None:intergenic |
| GCCGTTTGAGGGATCGAGTA+AGG | 0.460625 | 2:+51290668 | None:intergenic |
| ACCTTACTCGATCCCTCAAA+CGG | 0.473396 | 2:-51290669 | MsG0280009395.01.T01:CDS |
| GCTAGTGAACTTGGCGGCGG+TGG | 0.473653 | 2:-51290306 | MsG0280009395.01.T01:CDS |
| GCATATAACGACGCCGTTTG+AGG | 0.475721 | 2:+51290656 | None:intergenic |
| GTTTCGGTGCGGGATTTAGC+GGG | 0.479527 | 2:+51290729 | None:intergenic |
| TCTTTGTCGGTGCGGAATTG+TGG | 0.480140 | 2:-51290520 | MsG0280009395.01.T01:CDS |
| GGAAACCGTTTCTTTACAAA+CGG | 0.482757 | 2:+51290632 | None:intergenic |
| CATATAACGACGCCGTTTGA+GGG | 0.500879 | 2:+51290657 | None:intergenic |
| CTGTTTCGCTTCCTCGTCAA+CGG | 0.504931 | 2:+51290611 | None:intergenic |
| ATGCGCCGTTTGTAAAGAAA+CGG | 0.509933 | 2:-51290637 | MsG0280009395.01.T01:CDS |
| GTCGAAGAAAGATGAAGAAT+CGG | 0.511489 | 2:+51290788 | None:intergenic |
| AGTGATGATGCTAGTGAACT+TGG | 0.519447 | 2:-51290315 | MsG0280009395.01.T01:CDS |
| GGAGATGGTGATGCGCTTGT+CGG | 0.522674 | 2:-51290439 | MsG0280009395.01.T01:CDS |
| TTTGTGTGACGGTTACTGTA+GGG | 0.534278 | 2:+51290700 | None:intergenic |
| TGTTTCGGTGCGGGATTTAG+CGG | 0.546426 | 2:+51290728 | None:intergenic |
| TGAGTAGTAAAAGCGCGTCT+TGG | 0.555119 | 2:+51290757 | None:intergenic |
| TTGTGATCATCTTTATCATG+CGG | 0.559253 | 2:-51290583 | MsG0280009395.01.T01:CDS |
| GGTAAGAAGCGTTTGTGTGA+CGG | 0.566304 | 2:+51290689 | None:intergenic |
| CGGAATTGTGGAGGATGAAG+AGG | 0.572347 | 2:-51290508 | MsG0280009395.01.T01:CDS |
| GTTTGTGTGACGGTTACTGT+AGG | 0.576938 | 2:+51290699 | None:intergenic |
| ACAATTCCGCACCGACAAAG+AGG | 0.599284 | 2:+51290522 | None:intergenic |
| GAGGAAGATGATGTTAATGG+TGG | 0.599878 | 2:-51290474 | MsG0280009395.01.T01:CDS |
| TAGGGATTGTTGTTTCGGTG+CGG | 0.602770 | 2:+51290718 | None:intergenic |
| TGAAGAGGATGTGAATGATG+AGG | 0.616785 | 2:-51290493 | MsG0280009395.01.T01:CDS |
| CTTCATTCTAATGATTCTGG+TGG | 0.625157 | 2:-51290348 | MsG0280009395.01.T01:CDS |
| GAAGCTCGAATCCGAAGCCA+CGG | 0.626516 | 2:+51290549 | None:intergenic |
| TTGTCGGTGCGGAATTGTGG+AGG | 0.626660 | 2:-51290517 | MsG0280009395.01.T01:CDS |
| TCTTGTCCTCTTTGTCGGTG+CGG | 0.626689 | 2:-51290528 | MsG0280009395.01.T01:CDS |
| GATGATGCTAGTGAACTTGG+CGG | 0.626692 | 2:-51290312 | MsG0280009395.01.T01:CDS |
| TCGGTGCGGGATTTAGCGGG+AGG | 0.626805 | 2:+51290732 | None:intergenic |
| TAATGGTGGAGATGTGATGA+GGG | 0.627088 | 2:-51290460 | MsG0280009395.01.T01:CDS |
| AGAAACGGTTTCCGTTGACG+AGG | 0.647530 | 2:-51290622 | MsG0280009395.01.T01:CDS |
| GATGCTAGTGAACTTGGCGG+CGG | 0.650900 | 2:-51290309 | MsG0280009395.01.T01:CDS |
| GCGCTTGTCGGAGTTGTCTG+AGG | 0.656779 | 2:-51290427 | MsG0280009395.01.T01:CDS |
| TGGAGATGTGATGAGGGAGA+TGG | 0.658931 | 2:-51290454 | MsG0280009395.01.T01:CDS |
| ATGCGGATTGTATTACTCCG+TGG | 0.659920 | 2:-51290566 | MsG0280009395.01.T01:CDS |
| TTAATGGTGGAGATGTGATG+AGG | 0.684637 | 2:-51290461 | MsG0280009395.01.T01:CDS |
| GCATGATAAAGATGATCACA+AGG | 0.688727 | 2:+51290585 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| TTGTGATCATCTTTATCATG+CGG | - | Chr2:51290511-51290530 | MsG0280009395.01.T01:CDS | 30.0% | |
| ! | TTGTCTGAGGATGATTTTTA+TGG | - | Chr2:51290680-51290699 | MsG0280009395.01.T01:CDS | 30.0% |
| !! | AGGATGATTTTTATGGATTG+AGG | - | Chr2:51290687-51290706 | MsG0280009395.01.T01:CDS | 30.0% |
| CTGCTTCATTCTAATGATTC+TGG | - | Chr2:51290743-51290762 | MsG0280009395.01.T01:CDS | 35.0% | |
| CTTCATTCTAATGATTCTGG+TGG | - | Chr2:51290746-51290765 | MsG0280009395.01.T01:CDS | 35.0% | |
| GATGAGGAAGATGATGTTAA+TGG | - | Chr2:51290617-51290636 | MsG0280009395.01.T01:CDS | 35.0% | |
| GCATGATAAAGATGATCACA+AGG | + | Chr2:51290512-51290531 | None:intergenic | 35.0% | |
| GGAAACCGTTTCTTTACAAA+CGG | + | Chr2:51290465-51290484 | None:intergenic | 35.0% | |
| GTCGAAGAAAGATGAAGAAT+CGG | + | Chr2:51290309-51290328 | None:intergenic | 35.0% | |
| !! | TACTGTAGGGATTGTTGTTT+CGG | + | Chr2:51290384-51290403 | None:intergenic | 35.0% |
| ATGCGCCGTTTGTAAAGAAA+CGG | - | Chr2:51290457-51290476 | MsG0280009395.01.T01:CDS | 40.0% | |
| ATTGTATTACTCCGTGGCTT+CGG | - | Chr2:51290534-51290553 | MsG0280009395.01.T01:CDS | 40.0% | |
| CATTCTAATGATTCTGGTGG+TGG | - | Chr2:51290749-51290768 | MsG0280009395.01.T01:CDS | 40.0% | |
| GAGGAAGATGATGTTAATGG+TGG | - | Chr2:51290620-51290639 | MsG0280009395.01.T01:CDS | 40.0% | |
| TGAAGAGGATGTGAATGATG+AGG | - | Chr2:51290601-51290620 | MsG0280009395.01.T01:CDS | 40.0% | |
| TTTGTGTGACGGTTACTGTA+GGG | + | Chr2:51290397-51290416 | None:intergenic | 40.0% | |
| ! | AGTGATGATGCTAGTGAACT+TGG | - | Chr2:51290779-51290798 | MsG0280009395.01.T01:CDS | 40.0% |
| ! | TAATGGTGGAGATGTGATGA+GGG | - | Chr2:51290634-51290653 | MsG0280009395.01.T01:CDS | 40.0% |
| ! | TTAATGGTGGAGATGTGATG+AGG | - | Chr2:51290633-51290652 | MsG0280009395.01.T01:CDS | 40.0% |
| ACCTTACTCGATCCCTCAAA+CGG | - | Chr2:51290425-51290444 | MsG0280009395.01.T01:CDS | 45.0% | |
| CATATAACGACGCCGTTTGA+GGG | + | Chr2:51290440-51290459 | None:intergenic | 45.0% | |
| GAGCTTCTTGTCCTCTTTGT+CGG | - | Chr2:51290561-51290580 | MsG0280009395.01.T01:CDS | 45.0% | |
| GATGATGCTAGTGAACTTGG+CGG | - | Chr2:51290782-51290801 | MsG0280009395.01.T01:CDS | 45.0% | |
| GTTTGTGTGACGGTTACTGT+AGG | + | Chr2:51290398-51290417 | None:intergenic | 45.0% | |
| ! | ATGAAGAATCGGCGTCGTTT+TGG | + | Chr2:51290298-51290317 | None:intergenic | 45.0% |
| ! | ATGCGGATTGTATTACTCCG+TGG | - | Chr2:51290528-51290547 | MsG0280009395.01.T01:CDS | 45.0% |
| ! | TGAGTAGTAAAAGCGCGTCT+TGG | + | Chr2:51290340-51290359 | None:intergenic | 45.0% |
| !! | GGTAAGAAGCGTTTGTGTGA+CGG | + | Chr2:51290408-51290427 | None:intergenic | 45.0% |
| !! | TAGGGATTGTTGTTTCGGTG+CGG | + | Chr2:51290379-51290398 | None:intergenic | 45.0% |
| !! | TGAAGAATCGGCGTCGTTTT+GGG | + | Chr2:51290297-51290316 | None:intergenic | 45.0% |
| AGAAACGGTTTCCGTTGACG+AGG | - | Chr2:51290472-51290491 | MsG0280009395.01.T01:CDS | 50.0% | |
| CGGAATTGTGGAGGATGAAG+AGG | - | Chr2:51290586-51290605 | MsG0280009395.01.T01:CDS | 50.0% | |
| CTGTTTCGCTTCCTCGTCAA+CGG | + | Chr2:51290486-51290505 | None:intergenic | 50.0% | |
| GCATATAACGACGCCGTTTG+AGG | + | Chr2:51290441-51290460 | None:intergenic | 50.0% | |
| TCTTGTCCTCTTTGTCGGTG+CGG | - | Chr2:51290566-51290585 | MsG0280009395.01.T01:CDS | 50.0% | |
| TCTTTGTCGGTGCGGAATTG+TGG | - | Chr2:51290574-51290593 | MsG0280009395.01.T01:CDS | 50.0% | |
| TGGAGATGTGATGAGGGAGA+TGG | - | Chr2:51290640-51290659 | MsG0280009395.01.T01:CDS | 50.0% | |
| ! | ACAATTCCGCACCGACAAAG+AGG | + | Chr2:51290575-51290594 | None:intergenic | 50.0% |
| ! | TGTTTCGGTGCGGGATTTAG+CGG | + | Chr2:51290369-51290388 | None:intergenic | 50.0% |
| !! | AGGGATTGTTGTTTCGGTGC+GGG | + | Chr2:51290378-51290397 | None:intergenic | 50.0% |
| !!! | TCGGCGTCGTTTTGGGAAAA+AGG | + | Chr2:51290290-51290309 | None:intergenic | 50.0% |
| GAAGCTCGAATCCGAAGCCA+CGG | + | Chr2:51290548-51290567 | None:intergenic | 55.0% | |
| GATGCTAGTGAACTTGGCGG+CGG | - | Chr2:51290785-51290804 | MsG0280009395.01.T01:CDS | 55.0% | |
| GCCGTTTGAGGGATCGAGTA+AGG | + | Chr2:51290429-51290448 | None:intergenic | 55.0% | |
| TTGTCGGTGCGGAATTGTGG+AGG | - | Chr2:51290577-51290596 | MsG0280009395.01.T01:CDS | 55.0% | |
| ! | GGAGATGGTGATGCGCTTGT+CGG | - | Chr2:51290655-51290674 | MsG0280009395.01.T01:CDS | 55.0% |
| ! | GTTTCGGTGCGGGATTTAGC+GGG | + | Chr2:51290368-51290387 | None:intergenic | 55.0% |
| GCGCTTGTCGGAGTTGTCTG+AGG | - | Chr2:51290667-51290686 | MsG0280009395.01.T01:CDS | 60.0% | |
| AGTGAACTTGGCGGCGGTGG+TGG | - | Chr2:51290791-51290810 | MsG0280009395.01.T01:CDS | 65.0% | |
| GCTAGTGAACTTGGCGGCGG+TGG | - | Chr2:51290788-51290807 | MsG0280009395.01.T01:CDS | 65.0% | |
| TCGGTGCGGGATTTAGCGGG+AGG | + | Chr2:51290365-51290384 | None:intergenic | 65.0% | |
| !! | GGCGGTGGTGGTGGTGTAGA+TGG | - | Chr2:51290803-51290822 | MsG0280009395.01.T01:CDS | 65.0% |
| ! | GAACTTGGCGGCGGTGGTGG+TGG | - | Chr2:51290794-51290813 | MsG0280009395.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 51290278 | 51290838 | 51290278 | ID=MsG0280009395.01;Name=MsG0280009395.01 |
| Chr2 | mRNA | 51290278 | 51290838 | 51290278 | ID=MsG0280009395.01.T01;Parent=MsG0280009395.01;Name=MsG0280009395.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|186 |
| Chr2 | exon | 51290278 | 51290838 | 51290278 | ID=MsG0280009395.01.T01:exon:9049;Parent=MsG0280009395.01.T01 |
| Chr2 | CDS | 51290278 | 51290838 | 51290278 | ID=MsG0280009395.01.T01:cds;Parent=MsG0280009395.01.T01 |
| Gene Sequence |
| Protein sequence |
