AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180000503.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000503.01.T01 MTR_1g014640 97.222 36 1 0 55 90 161 196 1.11e-16 75.5
MsG0180000503.01.T01 MTR_1g013400 97.222 36 1 0 55 90 161 196 1.11e-16 75.5
MsG0180000503.01.T01 MTR_3g105730 88.889 36 4 0 55 90 118 153 3.35e-15 70.1
MsG0180000503.01.T01 MTR_3g105730 52.174 69 26 1 29 90 63 131 3.47e-15 70.5
MsG0180000503.01.T01 MTR_3g105730 52.174 69 26 1 29 90 85 153 4.04e-15 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000503.01.T01 AT4G31750 94.444 36 2 0 55 90 117 152 7.43e-16 72.8
MsG0180000503.01.T01 AT4G31750 94.444 36 2 0 55 90 117 152 7.72e-16 72.8
MsG0180000503.01.T01 AT4G31750 94.444 36 2 0 55 90 117 152 7.72e-16 72.8
MsG0180000503.01.T01 AT5G24940 88.889 36 4 0 55 90 117 152 3.40e-14 68.9
MsG0180000503.01.T01 AT5G10740 86.111 36 5 0 55 90 117 152 2.04e-13 66.2
MsG0180000503.01.T01 AT5G10740 86.111 36 5 0 55 90 117 152 2.04e-13 66.2

Find 75 sgRNAs with CRISPR-Local

Find 356 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTCTCTTACTTCCATATTT+TGG 0.048660 1:-7026874 MsG0180000503.01.T01:three_prime_UTR
TCCATCTGGTTTCCTAGTTT+TGG 0.223370 1:-7026680 MsG0180000503.01.T01:three_prime_UTR
TTCTCTTGAGTTTCTTATAC+TGG 0.273284 1:-7027886 MsG0180000503.01.T01:CDS
AATCAAAGTTAAACTTATTA+TGG 0.286096 1:-7026923 MsG0180000503.01.T01:three_prime_UTR
CCTTGTCCTTGTTGTCCATC+TGG 0.302260 1:-7026694 MsG0180000503.01.T01:three_prime_UTR
GCTTCTTCTGCATCCTCAAT+TGG 0.302601 1:+7027155 None:intergenic
AGGTTATTCTTGCTTGAAAA+AGG 0.314028 1:+7031751 None:intergenic
ACAAATAGGATCCCAAAATA+TGG 0.319454 1:+7026862 None:intergenic
TTCCTAGCTACAATACAAAT+AGG 0.352651 1:+7026848 None:intergenic
GCTTCCACTGCCATTCTTGT+TGG 0.352895 1:-7028733 MsG0180000503.01.T01:CDS
TGAATATTCAACTTGTGATA+TGG 0.357223 1:-7031657 MsG0180000503.01.T01:five_prime_UTR
TCAAAATCAGAGTTAATTAT+AGG 0.357301 1:-7026992 MsG0180000503.01.T01:three_prime_UTR
CCACTATTGTTATGATAACT+TGG 0.368566 1:-7031776 MsG0180000503.01.T01:five_prime_UTR
ACAAGAATTGACGGCGTTGA+TGG 0.370122 1:-7029943 MsG0180000503.01.T01:CDS
TCCATTGAAGATCTCTTGCC+AGG 0.370550 1:+7029979 None:intergenic
GTTTGCTTGTTGCAAATGTT+GGG 0.374361 1:-7028705 MsG0180000503.01.T01:CDS
TTTACATGCAGACATTTGTA+TGG 0.379554 1:+7026785 None:intergenic
CCTGTTAGTGGTGGAGGCTC+AGG 0.383170 1:-7031579 MsG0180000503.01.T01:intron
CGTTTGCTTGTTGCAAATGT+TGG 0.389439 1:-7028706 MsG0180000503.01.T01:CDS
TGTTCTGTCACCTTCAAGTC+AGG 0.389562 1:-7031622 MsG0180000503.01.T01:five_prime_UTR
TGTTATATGCAGGGTGGAAA+TGG 0.399167 1:-7028671 MsG0180000503.01.T01:intron
CCTGAGCCTCCACCACTAAC+AGG 0.401508 1:+7031579 None:intergenic
GCAGCATGAACCTGACTTGA+AGG 0.411927 1:+7031612 None:intergenic
CCAAGTTATCATAACAATAG+TGG 0.438250 1:+7031776 None:intergenic
AATAATCAAAACAGAGATGC+TGG 0.452585 1:-7028763 MsG0180000503.01.T01:CDS
CACCCTGCATATAACAGCTC+TGG 0.459972 1:+7028678 None:intergenic
TCGTTTCCTGATGACAATCA+AGG 0.469925 1:-7027068 MsG0180000503.01.T01:three_prime_UTR
GTGTACTTCAAACATAGAAT+TGG 0.471641 1:-7027017 MsG0180000503.01.T01:three_prime_UTR
TATGGATATGCTAGCTCCCC+TGG 0.473211 1:-7029997 MsG0180000503.01.T01:CDS
GGTTGTTCTTGTCTGTGTAA+AGG 0.485289 1:-7026659 MsG0180000503.01.T01:three_prime_UTR
TCTCTTCTCCTCTCTCCCTA+AGG 0.490415 1:-7032022 MsG0180000503.01.T01:intron
CTTTGATTCCTATGCTTGCA+TGG 0.490552 1:+7026938 None:intergenic
ACTCCAGAGCTGTTATATGC+AGG 0.494434 1:-7028681 MsG0180000503.01.T01:CDS
GAAGAACCTTGATTGTCATC+AGG 0.495156 1:+7027062 None:intergenic
TGCTATGATTAAACCAATTG+AGG 0.496383 1:-7027168 MsG0180000503.01.T01:CDS
CCCTGGCAAGAGATCTTCAA+TGG 0.496968 1:-7029980 MsG0180000503.01.T01:CDS
GGCGTTGATGGCGAAGTTGT+TGG 0.502083 1:-7029931 MsG0180000503.01.T01:CDS
TCATAACAATAGTGGAAAAG+TGG 0.503209 1:+7031784 None:intergenic
CAAACGGTCACCAACAAGAA+TGG 0.514978 1:+7028723 None:intergenic
AGAAAGTACCTTAGGGAGAG+AGG 0.515490 1:+7032014 None:intergenic
GCTGATGATACACCTGTTAG+TGG 0.523474 1:-7031591 MsG0180000503.01.T01:five_prime_UTR
TCTTCGTCTCGTAATAGCTC+TGG 0.524836 1:-7027044 MsG0180000503.01.T01:three_prime_UTR
ATCCTATTTGTATTGTAGCT+AGG 0.526788 1:-7026850 MsG0180000503.01.T01:three_prime_UTR
AGACAAGAACAACCAAAACT+AGG 0.530070 1:+7026668 None:intergenic
TGGTAGTACACACAGTTACA+AGG 0.531486 1:+7026958 None:intergenic
ATATGTATCTACAGCCAGAA+TGG 0.533971 1:-7030030 MsG0180000503.01.T01:intron
CTCCAGAGCTGTTATATGCA+GGG 0.538743 1:-7028680 MsG0180000503.01.T01:CDS
CATAACAATAGTGGAAAAGT+GGG 0.544502 1:+7031785 None:intergenic
CAACATTTGCAACAAGCAAA+CGG 0.552780 1:+7028707 None:intergenic
CCATTGAAGATCTCTTGCCA+GGG 0.555774 1:+7029980 None:intergenic
TGGGATGTTTGTCTCAAATG+AGG 0.561580 1:-7027849 MsG0180000503.01.T01:intron
GTCACCAACAAGAATGGCAG+TGG 0.571832 1:+7028729 None:intergenic
TACTGGCTAGTGACGGACTG+TGG 0.572019 1:-7027869 MsG0180000503.01.T01:CDS
GTGTACTACCATGCAAGCAT+AGG 0.576254 1:-7026946 MsG0180000503.01.T01:three_prime_UTR
CAGAATGGAAAATTCAGCTA+TGG 0.581697 1:-7030015 MsG0180000503.01.T01:exon
GATACACCTGTTAGTGGTGG+AGG 0.584503 1:-7031585 MsG0180000503.01.T01:five_prime_UTR
AAATCAGAGTTAATTATAGG+AGG 0.587139 1:-7026989 MsG0180000503.01.T01:three_prime_UTR
TTGATTTCAGACATCAGAGT+CGG 0.587149 1:+7028787 None:intergenic
AATAACAATATTGCGTGTAG+AGG 0.593012 1:+7031731 None:intergenic
TTACATGCAGACATTTGTAT+GGG 0.597576 1:+7026786 None:intergenic
TCTGCATGTAAATGTGGTGG+TGG 0.604473 1:-7026774 MsG0180000503.01.T01:three_prime_UTR
TTTGCTTGTTGCAAATGTTG+GGG 0.604673 1:-7028704 MsG0180000503.01.T01:CDS
ACTGGCTAGTGACGGACTGT+GGG 0.617935 1:-7027868 MsG0180000503.01.T01:CDS
ACCAAAACTAGGAAACCAGA+TGG 0.620055 1:+7026679 None:intergenic
TTTCTTATACTGGCTAGTGA+CGG 0.622894 1:-7027876 MsG0180000503.01.T01:CDS
AGGAAACCAGATGGACAACA+AGG 0.623874 1:+7026688 None:intergenic
CAAATGTCTGCATGTAAATG+TGG 0.625548 1:-7026780 MsG0180000503.01.T01:three_prime_UTR
CATTGAAGATCTCTTGCCAG+GGG 0.630301 1:+7029981 None:intergenic
CCAGATGGACAACAAGGACA+AGG 0.641977 1:+7026694 None:intergenic
TGATGAAGAAGCGTATCAAG+AGG 0.643894 1:-7027121 MsG0180000503.01.T01:CDS
TAGCAACATATCTATGCTAG+AGG 0.646458 1:+7026899 None:intergenic
ATGCAGAAGAAGCAGCAAAG+AGG 0.661189 1:-7027145 MsG0180000503.01.T01:CDS
GATGATACACCTGTTAGTGG+TGG 0.682529 1:-7031588 MsG0180000503.01.T01:five_prime_UTR
CAGAGCTGTTATATGCAGGG+TGG 0.689617 1:-7028677 MsG0180000503.01.T01:CDS
ATGTCTGCATGTAAATGTGG+TGG 0.715376 1:-7026777 MsG0180000503.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATGTAATTTAAAAACATAT+TGG + Chr1:7031432-7031451 None:intergenic 10.0%
!!! TAAATTTTTATTTTGTATGT+GGG - Chr1:7031298-7031317 MsG0180000503.01.T01:intron 10.0%
!!! TTAAATTTTTATTTTGTATG+TGG - Chr1:7031297-7031316 MsG0180000503.01.T01:intron 10.0%
!! AATCAAAGTTAAACTTATTA+TGG - Chr1:7031870-7031889 MsG0180000503.01.T01:intron 15.0%
!! ATTAAGGAAAGAAAAAATAT+AGG + Chr1:7029056-7029075 None:intergenic 15.0%
!! TAAAATGTTACAAAGTAAAT+GGG + Chr1:7031280-7031299 None:intergenic 15.0%
!! TTAAAATGTTACAAAGTAAA+TGG + Chr1:7031281-7031300 None:intergenic 15.0%
!!! ATTCATTAATAGCATTTTTT+CGG - Chr1:7029440-7029459 MsG0180000503.01.T01:intron 15.0%
!!! GTTTTATCATTTTTGTTTAA+TGG - Chr1:7027291-7027310 MsG0180000503.01.T01:intron 15.0%
!!! TAATATTTTACAAAAATGCT+AGG + Chr1:7031127-7031146 None:intergenic 15.0%
!!! TTATTCTTAGGATTTTAAAT+TGG - Chr1:7027525-7027544 MsG0180000503.01.T01:intron 15.0%
!! AAAATGTTACAAAGTAAATG+GGG + Chr1:7031279-7031298 None:intergenic 20.0%
!! AAATGCTATTAATGAATTGA+AGG + Chr1:7029437-7029456 None:intergenic 20.0%
!! AATAGATATAGTATAGTATC+AGG + Chr1:7029722-7029741 None:intergenic 20.0%
!! AATATTAGCGAACAATTTAA+AGG - Chr1:7031140-7031159 MsG0180000503.01.T01:intron 20.0%
!! ACTATATCTATTAGAAATGA+AGG - Chr1:7029730-7029749 MsG0180000503.01.T01:intron 20.0%
!! ATATTAGCGAACAATTTAAA+GGG - Chr1:7031141-7031160 MsG0180000503.01.T01:intron 20.0%
!! ATTTATCGGAAAAAGAAAAA+GGG + Chr1:7031005-7031024 None:intergenic 20.0%
!! CTGTGTAAAAAAAATACAAA+TGG + Chr1:7029968-7029987 None:intergenic 20.0%
!! TAAAATCATGATTATTCTCA+AGG - Chr1:7028000-7028019 MsG0180000503.01.T01:intron 20.0%
!! TATTTATCGGAAAAAGAAAA+AGG + Chr1:7031006-7031025 None:intergenic 20.0%
!! TCAAAATCAGAGTTAATTAT+AGG - Chr1:7031801-7031820 MsG0180000503.01.T01:five_prime_UTR 20.0%
!! TTAAAGCCTCTTAAAAAAAA+GGG - Chr1:7031169-7031188 MsG0180000503.01.T01:intron 20.0%
!!! AACTAAGATTTTTTCTTTGT+GGG - Chr1:7026946-7026965 MsG0180000503.01.T01:three_prime_UTR 20.0%
!!! ACATGAATATTGTTTTTGTT+TGG + Chr1:7032067-7032086 None:intergenic 20.0%
!!! ATAAAGTATAAATCTGGTTT+TGG - Chr1:7029247-7029266 MsG0180000503.01.T01:intron 20.0%
!!! ATTGTTTCTTCTTCATTTTT+TGG - Chr1:7027082-7027101 MsG0180000503.01.T01:three_prime_UTR 20.0%
!!! ATTTGATTTTCTAAAACTTG+AGG - Chr1:7030185-7030204 MsG0180000503.01.T01:intron 20.0%
!!! CATTTTCAAAAATTTATCCA+TGG - Chr1:7031448-7031467 MsG0180000503.01.T01:intron 20.0%
!!! GATTTTTGTTTACTATTGTT+TGG - Chr1:7028596-7028615 MsG0180000503.01.T01:intron 20.0%
!!! TAACTAAGATTTTTTCTTTG+TGG - Chr1:7026945-7026964 MsG0180000503.01.T01:three_prime_UTR 20.0%
!!! TGATTTGTATCAAGATTATT+TGG - Chr1:7031063-7031082 MsG0180000503.01.T01:intron 20.0%
!!! TGTTTAATGGTTTTTGTTTA+AGG - Chr1:7027304-7027323 MsG0180000503.01.T01:intron 20.0%
!!! TGTTTTACTACATTTGTATT+TGG - Chr1:7030383-7030402 MsG0180000503.01.T01:intron 20.0%
! AAAAGGGAAGAAAAAAACAA+AGG + Chr1:7030989-7031008 None:intergenic 25.0%
! AAAATTGATATTGCAGTTGT+AGG - Chr1:7027645-7027664 MsG0180000503.01.T01:intron 25.0%
! AAATCAGAGTTAATTATAGG+AGG - Chr1:7031804-7031823 MsG0180000503.01.T01:five_prime_UTR 25.0%
! AACAACAATAACAATAACCA+TGG + Chr1:7028387-7028406 None:intergenic 25.0%
! AATCTACATAAGGAAAGTAA+AGG + Chr1:7031221-7031240 None:intergenic 25.0%
! ACTTTCCTTATGTAGATTAA+AGG - Chr1:7031223-7031242 MsG0180000503.01.T01:intron 25.0%
! ATACTTAAACCATACTTTAC+AGG - Chr1:7030649-7030668 MsG0180000503.01.T01:intron 25.0%
! ATTGAAGAAAACCAGTTTAA+AGG + Chr1:7029915-7029934 None:intergenic 25.0%
! ATTGTTTGATTAGATTGTCA+AGG - Chr1:7030354-7030373 MsG0180000503.01.T01:intron 25.0%
! CAAAAAATATCGGAAATAAC+AGG - Chr1:7031478-7031497 MsG0180000503.01.T01:intron 25.0%
! CAATTACTGTGACAATATAA+AGG + Chr1:7028161-7028180 None:intergenic 25.0%
! CAATTCATTTATATCTCTTG+TGG + Chr1:7031045-7031064 None:intergenic 25.0%
! CGAAAATGCACTATATTTAT+CGG + Chr1:7031019-7031038 None:intergenic 25.0%
! CTTAAAGCCTCTTAAAAAAA+AGG - Chr1:7031168-7031187 MsG0180000503.01.T01:intron 25.0%
! CTTTCTTGTTAAAAACTTTC+AGG - Chr1:7029762-7029781 MsG0180000503.01.T01:intron 25.0%
! GTAAAAAAAATACAAATGGC+AGG + Chr1:7029964-7029983 None:intergenic 25.0%
! TAAAATCCTAAGAATAACCA+TGG + Chr1:7027522-7027541 None:intergenic 25.0%
! TAATGTCATTCATTCATACT+TGG - Chr1:7028410-7028429 MsG0180000503.01.T01:intron 25.0%
! TCAAAAATTTATCCATGGAA+TGG - Chr1:7031453-7031472 MsG0180000503.01.T01:intron 25.0%
! TGAAAAATTATCTTGATGTG+CGG - Chr1:7027924-7027943 MsG0180000503.01.T01:intron 25.0%
! TGAAAATGTCTTGATATTGT+GGG - Chr1:7027709-7027728 MsG0180000503.01.T01:intron 25.0%
! TGAATATTCAACTTGTGATA+TGG - Chr1:7027136-7027155 MsG0180000503.01.T01:CDS 25.0%
! TGATATTGTGAATGTTATCT+TGG - Chr1:7028280-7028299 MsG0180000503.01.T01:intron 25.0%
! TGGAATGGAACAAAAAATAT+CGG - Chr1:7031468-7031487 MsG0180000503.01.T01:intron 25.0%
! TGTCTCATAAAGTATAAATC+TGG - Chr1:7029241-7029260 MsG0180000503.01.T01:intron 25.0%
! TTAAAACCATGGTTATTCTT+AGG - Chr1:7027513-7027532 MsG0180000503.01.T01:intron 25.0%
! TTAAAACCTTAAACAAACCA+TGG + Chr1:7027381-7027400 None:intergenic 25.0%
! TTATATTGTCACAGTAATTG+TGG - Chr1:7028161-7028180 MsG0180000503.01.T01:intron 25.0%
! TTTCTCTATATTTCCCTATT+GGG - Chr1:7026874-7026893 MsG0180000503.01.T01:three_prime_UTR 25.0%
!! AAAAAAGTTTGAGTTAGAGT+TGG + Chr1:7031583-7031602 None:intergenic 25.0%
!! AAAGATGCAAATTTTGTACA+TGG + Chr1:7026857-7026876 None:intergenic 25.0%
!! AAGATGCAAATTTTGTACAT+GGG + Chr1:7026856-7026875 None:intergenic 25.0%
!! AATAATTTTCATCTCAAACC+GGG + Chr1:7028565-7028584 None:intergenic 25.0%
!! ATGGTTATTGTTATTGTTGT+TGG - Chr1:7028386-7028405 MsG0180000503.01.T01:intron 25.0%
!! ATGTTTTTCTCAATTCTCAA+CGG + Chr1:7030421-7030440 None:intergenic 25.0%
!! ATGTTTTTCTTTTATGGACT+TGG - Chr1:7029467-7029486 MsG0180000503.01.T01:intron 25.0%
!! CAATAATTTTCATCTCAAAC+CGG + Chr1:7028566-7028585 None:intergenic 25.0%
!! TTTAAAACCATGGTTATTCT+CGG - Chr1:7027512-7027531 MsG0180000503.01.T01:intron 25.0%
!! TTTTATGAGACAAGAATTGA+CGG - Chr1:7028841-7028860 MsG0180000503.01.T01:intron 25.0%
!!! AAATAACCATGGTTTGTTTA+AGG - Chr1:7027372-7027391 MsG0180000503.01.T01:intron 25.0%
!!! ACTAAGATTTTTTCTTTGTG+GGG - Chr1:7026947-7026966 MsG0180000503.01.T01:three_prime_UTR 25.0%
!!! ACTTTTTTCTACTTTTCTTC+AGG - Chr1:7031595-7031614 MsG0180000503.01.T01:five_prime_UTR 25.0%
!!! ATATTTTTTGTTCCATTCCA+TGG + Chr1:7031468-7031487 None:intergenic 25.0%
!!! ATTCATAACTTGGTTTTATG+TGG - Chr1:7028513-7028532 MsG0180000503.01.T01:intron 25.0%
!!! ATTTTTATTTTGTATGTGGG+TGG - Chr1:7031301-7031320 MsG0180000503.01.T01:intron 25.0%
!!! GAATATTGTTTTTGTTTGGA+AGG + Chr1:7032063-7032082 None:intergenic 25.0%
!!! GATTTTCCTTTTGAAGTTAT+TGG - Chr1:7029090-7029109 MsG0180000503.01.T01:intron 25.0%
!!! TAAGGTTTTAATTGATGTTG+CGG - Chr1:7027322-7027341 MsG0180000503.01.T01:intron 25.0%
!!! TTGACTTTTGATTTTCTGAT+CGG - Chr1:7029274-7029293 MsG0180000503.01.T01:intron 25.0%
AAAAACCTTGGTTATTCTCA+AGG - Chr1:7027825-7027844 MsG0180000503.01.T01:intron 30.0%
AATAACAATATTGCGTGTAG+AGG + Chr1:7027065-7027084 None:intergenic 30.0%
AATAACATTGTAGTTGCTGA+CGG - Chr1:7027797-7027816 MsG0180000503.01.T01:intron 30.0%
AATAATCAAAACAGAGATGC+TGG - Chr1:7030030-7030049 MsG0180000503.01.T01:intron 30.0%
ACAAATAGGATCCCAAAATA+TGG + Chr1:7031934-7031953 None:intergenic 30.0%
AGAACAGTGTAGTTAAATTG+TGG + Chr1:7029677-7029696 None:intergenic 30.0%
AGAGATGGAATATCAAAGAA+TGG + Chr1:7030796-7030815 None:intergenic 30.0%
AGGTTATTCTTGCTTGAAAA+AGG + Chr1:7027045-7027064 None:intergenic 30.0%
ATAATCGTTTGGTTGTCAAA+TGG - Chr1:7030213-7030232 MsG0180000503.01.T01:intron 30.0%
ATCCTATTTGTATTGTAGCT+AGG - Chr1:7031943-7031962 MsG0180000503.01.T01:intron 30.0%
CAACTTAACCACAATACAAA+CGG + Chr1:7028064-7028083 None:intergenic 30.0%
CCAAGTTATCATAACAATAG+TGG + Chr1:7027020-7027039 None:intergenic 30.0%
CCACTATTGTTATGATAACT+TGG - Chr1:7027017-7027036 MsG0180000503.01.T01:three_prime_UTR 30.0%
CCATTTCCAATAACTTCAAA+AGG + Chr1:7029099-7029118 None:intergenic 30.0%
CCTTAAGTCGGAAAAATTAA+AGG + Chr1:7028702-7028721 None:intergenic 30.0%
CTTTCTCTATATTTCCCTAT+TGG - Chr1:7026873-7026892 MsG0180000503.01.T01:three_prime_UTR 30.0%
GGCTGATCAAATTACTAAAT+AGG + Chr1:7029826-7029845 None:intergenic 30.0%
GTGAAAATGTCTTGATATTG+TGG - Chr1:7027708-7027727 MsG0180000503.01.T01:intron 30.0%
GTGTACTTCAAACATAGAAT+TGG - Chr1:7031776-7031795 MsG0180000503.01.T01:five_prime_UTR 30.0%
GTTAATGAAAAAGCCAGAAT+TGG + Chr1:7028673-7028692 None:intergenic 30.0%
TAAAACCTTGAGAATAACCA+AGG + Chr1:7027833-7027852 None:intergenic 30.0%
TAATCGTTATGGTTGTCAAA+TGG - Chr1:7030161-7030180 MsG0180000503.01.T01:intron 30.0%
TACCATCAAAAACTCCAAAA+AGG + Chr1:7028888-7028907 None:intergenic 30.0%
TAGAGTTGGATAAGACATTA+GGG + Chr1:7031569-7031588 None:intergenic 30.0%
TATAGTATAGTATCAGGCAT+AGG + Chr1:7029716-7029735 None:intergenic 30.0%
TCAAGAGTCAATACTCTTAA+AGG + Chr1:7029514-7029533 None:intergenic 30.0%
TCCATTGACAGAAACAATTA+AGG + Chr1:7029072-7029091 None:intergenic 30.0%
TGCTATGATTAAACCAATTG+AGG - Chr1:7031625-7031644 MsG0180000503.01.T01:five_prime_UTR 30.0%
TTAAAACCATGGTTATTCTC+GGG - Chr1:7028198-7028217 MsG0180000503.01.T01:intron 30.0%
TTACATGCAGACATTTGTAT+GGG + Chr1:7032010-7032029 None:intergenic 30.0%
TTAGAAAAACACCTGGATTT+CGG + Chr1:7030754-7030773 None:intergenic 30.0%
TTAGAGTTGGATAAGACATT+AGG + Chr1:7031570-7031589 None:intergenic 30.0%
TTCCTAGCTACAATACAAAT+AGG + Chr1:7031948-7031967 None:intergenic 30.0%
TTCTCTTGAGTTTCTTATAC+TGG - Chr1:7030907-7030926 MsG0180000503.01.T01:intron 30.0%
TTGAGGAAATCATAATCGTT+TGG - Chr1:7030202-7030221 MsG0180000503.01.T01:intron 30.0%
TTGCTCCTTTAATCTACATA+AGG + Chr1:7031231-7031250 None:intergenic 30.0%
TTTACATGCAGACATTTGTA+TGG + Chr1:7032011-7032030 None:intergenic 30.0%
TTTATGGACTTGGAAAGTAA+TGG - Chr1:7029477-7029496 MsG0180000503.01.T01:intron 30.0%
! AAACAAACCATGGTTATTTC+AGG + Chr1:7027371-7027390 None:intergenic 30.0%
! AAACTTTTGATCACCCAATA+GGG + Chr1:7026890-7026909 None:intergenic 30.0%
! AAATCGTTTTGTAAAGAGTG+TGG - Chr1:7031968-7031987 MsG0180000503.01.T01:intron 30.0%
! AACATCTTATTAGCTCTCTA+TGG + Chr1:7029029-7029048 None:intergenic 30.0%
! ACATCTTATTAGCTCTCTAT+GGG + Chr1:7029028-7029047 None:intergenic 30.0%
! ACTCTCTTACTTCCATATTT+TGG - Chr1:7031919-7031938 MsG0180000503.01.T01:intron 30.0%
! ATAAGCTAGCTTACATAGAA+TGG - Chr1:7027607-7027626 MsG0180000503.01.T01:intron 30.0%
! ATCCAGGTGTTTTTCTAATA+TGG - Chr1:7030756-7030775 MsG0180000503.01.T01:intron 30.0%
! CAAACGGAAATTTAAAACCA+TGG - Chr1:7027502-7027521 MsG0180000503.01.T01:intron 30.0%
! CATAACAATAGTGGAAAAGT+GGG + Chr1:7027011-7027030 None:intergenic 30.0%
! CTCTCTTACTTCCATATTTT+GGG - Chr1:7031920-7031939 MsG0180000503.01.T01:intron 30.0%
! GGAAAAAAAGGAGACAATTT+TGG + Chr1:7026726-7026745 None:intergenic 30.0%
! TCATAACAATAGTGGAAAAG+TGG + Chr1:7027012-7027031 None:intergenic 30.0%
! TCATCTTATTGTTAGCTCTT+GGG - Chr1:7030593-7030612 MsG0180000503.01.T01:intron 30.0%
! TGTTAAAAACTTTCAGGTCA+TGG - Chr1:7029768-7029787 MsG0180000503.01.T01:intron 30.0%
! TGTTGTCTTTTGTGTTTGTT+TGG - Chr1:7027671-7027690 MsG0180000503.01.T01:intron 30.0%
! TTTAAATTGTTGTTGCGATG+CGG - Chr1:7027849-7027868 MsG0180000503.01.T01:intron 30.0%
!! ACTATTTTTCGTATCACTTG+TGG - Chr1:7030301-7030320 MsG0180000503.01.T01:intron 30.0%
!! CCTTTAATTTTTCCGACTTA+AGG - Chr1:7028699-7028718 MsG0180000503.01.T01:CDS 30.0%
!! CTATCCATGCTACTTATTTT+CGG - Chr1:7028940-7028959 MsG0180000503.01.T01:intron 30.0%
!! TCCTTAATTGTTTCTGTCAA+TGG - Chr1:7029068-7029087 MsG0180000503.01.T01:intron 30.0%
!! TTGGTGTCAGAAATGAATTT+CGG + Chr1:7029851-7029870 None:intergenic 30.0%
!!! ATTCTGGCTTTTTCATTAAC+CGG - Chr1:7028673-7028692 MsG0180000503.01.T01:CDS 30.0%
!!! CCTTTTGAAGTTATTGGAAA+TGG - Chr1:7029096-7029115 MsG0180000503.01.T01:intron 30.0%
!!! GAGAAACCCTTTTTTTTAAG+AGG + Chr1:7031178-7031197 None:intergenic 30.0%
AAACATGCTTTCAGTGTTTC+CGG + Chr1:7031378-7031397 None:intergenic 35.0%
AACCATACTTTACAGGAACT+TGG - Chr1:7030656-7030675 MsG0180000503.01.T01:intron 35.0%
AGACAAGAACAACCAAAACT+AGG + Chr1:7032128-7032147 None:intergenic 35.0%
ATAAGGAAACACTAGTCACA+TGG + Chr1:7029134-7029153 None:intergenic 35.0%
ATATGTATCTACAGCCAGAA+TGG - Chr1:7028763-7028782 MsG0180000503.01.T01:CDS 35.0%
ATCAATCAGAAATGACTCCT+TGG + Chr1:7031517-7031536 None:intergenic 35.0%
CAAATGTCTGCATGTAAATG+TGG - Chr1:7032013-7032032 MsG0180000503.01.T01:intron 35.0%
CAACATTTGCAACAAGCAAA+CGG + Chr1:7030089-7030108 None:intergenic 35.0%
CAACTGCAGTCACAATATAA+AGG + Chr1:7027476-7027495 None:intergenic 35.0%
CAGAATGGAAAATTCAGCTA+TGG - Chr1:7028778-7028797 MsG0180000503.01.T01:CDS 35.0%
CCTACATATTTATGTCTTGC+AGG - Chr1:7030869-7030888 MsG0180000503.01.T01:intron 35.0%
CCTGCAAGACATAAATATGT+AGG + Chr1:7030872-7030891 None:intergenic 35.0%
CTCCATATTAGAAAAACACC+TGG + Chr1:7030761-7030780 None:intergenic 35.0%
CTTAAGATGAATCGAAGAGA+TGG + Chr1:7030811-7030830 None:intergenic 35.0%
CTTGATATTGTGGGAAATTG+AGG - Chr1:7027718-7027737 MsG0180000503.01.T01:intron 35.0%
GAATGTCTTAAGTCCAATTC+TGG - Chr1:7028657-7028676 MsG0180000503.01.T01:intron 35.0%
GCACACATAAAGAGGAAATT+TGG - Chr1:7029202-7029221 MsG0180000503.01.T01:intron 35.0%
GTATGGGAAGTTAAAAACTC+TGG + Chr1:7031994-7032013 None:intergenic 35.0%
GTCATTCATTCATACTTGGA+AGG - Chr1:7028414-7028433 MsG0180000503.01.T01:intron 35.0%
GTGAATGTTATCTTGGTATG+CGG - Chr1:7028287-7028306 MsG0180000503.01.T01:intron 35.0%
GTTTGATCCTGAAATAACCA+TGG - Chr1:7027361-7027380 MsG0180000503.01.T01:intron 35.0%
TAAAACCATGGTTATTCTCG+GGG - Chr1:7028199-7028218 MsG0180000503.01.T01:intron 35.0%
TAACGTAACCACAACACAAA+AGG + Chr1:7027889-7027908 None:intergenic 35.0%
TAGCAACATATCTATGCTAG+AGG + Chr1:7031897-7031916 None:intergenic 35.0%
TAGTAGCTGCATAATCGTTA+TGG - Chr1:7030150-7030169 MsG0180000503.01.T01:intron 35.0%
TCATTCAATCGACCTTAAGT+CGG + Chr1:7028714-7028733 None:intergenic 35.0%
TCGGAAAAATTAAAGGAAGC+CGG + Chr1:7028695-7028714 None:intergenic 35.0%
TGATTAGATTGTCAAGGTGT+AGG - Chr1:7030360-7030379 MsG0180000503.01.T01:intron 35.0%
TGCTTTGCAGATTCATAACT+TGG - Chr1:7028503-7028522 MsG0180000503.01.T01:intron 35.0%
TTAAAGGATCGAACTGTGAT+AGG + Chr1:7029899-7029918 None:intergenic 35.0%
TTGATTTCAGACATCAGAGT+CGG + Chr1:7030009-7030028 None:intergenic 35.0%
TTGCAATTGTGGTTGTGATA+TGG - Chr1:7028310-7028329 MsG0180000503.01.T01:intron 35.0%
TTGTACTTTCTTTCTGATCC+CGG - Chr1:7028544-7028563 MsG0180000503.01.T01:intron 35.0%
TTGTGGTTGTGATATGGTTT+CGG - Chr1:7028316-7028335 MsG0180000503.01.T01:intron 35.0%
TTTAAATTGTTGCTGCCATG+CGG - Chr1:7028024-7028043 MsG0180000503.01.T01:intron 35.0%
TTTCCTTATGCAATGCTTCT+AGG - Chr1:7029145-7029164 MsG0180000503.01.T01:intron 35.0%
TTTGTGTTGTGGTTACGTTA+CGG - Chr1:7027889-7027908 MsG0180000503.01.T01:CDS 35.0%
! AGGATTTTAAATTGGCGTTG+CGG - Chr1:7027533-7027552 MsG0180000503.01.T01:intron 35.0%
! CAAACTTTTGATCACCCAAT+AGG + Chr1:7026891-7026910 None:intergenic 35.0%
! CAGATGGCAATTTAAAACCA+TGG - Chr1:7028187-7028206 MsG0180000503.01.T01:intron 35.0%
! CATAGCTGAATTTTCCATTC+TGG + Chr1:7028780-7028799 None:intergenic 35.0%
! GGTGCGATGTTTTTCTTTTA+TGG - Chr1:7029461-7029480 MsG0180000503.01.T01:intron 35.0%
! GTCATCTTATTGTTAGCTCT+TGG - Chr1:7030592-7030611 MsG0180000503.01.T01:intron 35.0%
! GTTTGCTTGTTGCAAATGTT+GGG - Chr1:7030088-7030107 MsG0180000503.01.T01:intron 35.0%
! TGGTGTCAGAAATGAATTTC+GGG + Chr1:7029850-7029869 None:intergenic 35.0%
! TGTCTTTGAGAAATTTCGAG+AGG - Chr1:7029351-7029370 MsG0180000503.01.T01:intron 35.0%
! TGTGTTTGTTTGGTGATTCT+TGG - Chr1:7027681-7027700 MsG0180000503.01.T01:intron 35.0%
! TTAAATTGTTGTTGCGATGC+GGG - Chr1:7027850-7027869 MsG0180000503.01.T01:CDS 35.0%
! TTTCTTATACTGGCTAGTGA+CGG - Chr1:7030917-7030936 MsG0180000503.01.T01:intron 35.0%
! TTTGCTTGTTGCAAATGTTG+GGG - Chr1:7030089-7030108 MsG0180000503.01.T01:intron 35.0%
!! GGCTTTGTTTGGTAAAATAG+CGG - Chr1:7027577-7027596 MsG0180000503.01.T01:intron 35.0%
!! TAGAGAGAGAAAGTACCTTA+GGG + Chr1:7026789-7026808 None:intergenic 35.0%
!! TGTTTGTTGCCTTTTGTTTG+TGG - Chr1:7028245-7028264 MsG0180000503.01.T01:intron 35.0%
!! TTAGAGAGAGAAAGTACCTT+AGG + Chr1:7026790-7026809 None:intergenic 35.0%
!!! AGATTTTTTTACCGCACCAT+AGG + Chr1:7029623-7029642 None:intergenic 35.0%
!!! CAGAAGGCATTTTAATACCA+TGG - Chr1:7028367-7028386 MsG0180000503.01.T01:intron 35.0%
!!! TTGCATGTTGCGTTACTTTT+CGG - Chr1:7027556-7027575 MsG0180000503.01.T01:intron 35.0%
AACATTGATCAGACACGTGA+TGG - Chr1:7028995-7029014 MsG0180000503.01.T01:intron 40.0%
AACTAGAGAGACTGCATTTC+CGG - Chr1:7031356-7031375 MsG0180000503.01.T01:intron 40.0%
ACAGTAATTGTGGTTGCAGA+TGG - Chr1:7028171-7028190 MsG0180000503.01.T01:intron 40.0%
ACCAAAACTAGGAAACCAGA+TGG + Chr1:7032117-7032136 None:intergenic 40.0%
ACCTCCGAAAATAAGTAGCA+TGG + Chr1:7028947-7028966 None:intergenic 40.0%
ACTACAAACCTATGGCAGAT+TGG + Chr1:7029870-7029889 None:intergenic 40.0%
ACTGCAATTGTAGTTGCAGA+CGG - Chr1:7027972-7027991 MsG0180000503.01.T01:intron 40.0%
ACTGCAGTTGTAGTTGCAAA+CGG - Chr1:7027486-7027505 MsG0180000503.01.T01:intron 40.0%
AGAAGAAAAACCTCCTGAGA+CGG + Chr1:7029323-7029342 None:intergenic 40.0%
AGAGAGAGAGAGGGAAAAAA+AGG + Chr1:7026738-7026757 None:intergenic 40.0%
AGTAAAGGCGAAGGTCTATT+TGG + Chr1:7031206-7031225 None:intergenic 40.0%
ATGCCTTCACAAATTGCCTA+TGG - Chr1:7029604-7029623 MsG0180000503.01.T01:intron 40.0%
ATGTCTGCATGTAAATGTGG+TGG - Chr1:7032016-7032035 MsG0180000503.01.T01:intron 40.0%
CAACACAAAAGGCAACAAAC+AGG + Chr1:7027878-7027897 None:intergenic 40.0%
CAATACAAACGGCAACAAAC+AGG + Chr1:7028053-7028072 None:intergenic 40.0%
CACAGTTCGATCCTTTAAAC+TGG - Chr1:7029901-7029920 MsG0180000503.01.T01:intron 40.0%
CAGCAACAACGTATTGCTTA+AGG + Chr1:7030729-7030748 None:intergenic 40.0%
CATAAGGAAAGTAAAGGCGA+AGG + Chr1:7031215-7031234 None:intergenic 40.0%
CGCAACTAACCACAAACAAA+AGG + Chr1:7028257-7028276 None:intergenic 40.0%
CGCCATATAACACTTCATTG+CGG - Chr1:7029560-7029579 MsG0180000503.01.T01:intron 40.0%
CTCCAAGTTCCTGTAAAGTA+TGG + Chr1:7030661-7030680 None:intergenic 40.0%
CTGACGGCAATTAAAAACCT+TGG - Chr1:7027813-7027832 MsG0180000503.01.T01:intron 40.0%
CTTTGATTCCTATGCTTGCA+TGG + Chr1:7031858-7031877 None:intergenic 40.0%
GAAGAACCTTGATTGTCATC+AGG + Chr1:7031734-7031753 None:intergenic 40.0%
GGATAGAAAGAGATGGAGAT+AGG + Chr1:7028926-7028945 None:intergenic 40.0%
GGTGAGAAACTACAAACCTA+TGG + Chr1:7029878-7029897 None:intergenic 40.0%
GGTTGTTCTTGTCTGTGTAA+AGG - Chr1:7032134-7032153 MsG0180000503.01.T01:five_prime_UTR 40.0%
GTAGCATGGATAGAAAGAGA+TGG + Chr1:7028933-7028952 None:intergenic 40.0%
GTGTAGTTAAATTGTGGCCA+TGG + Chr1:7029671-7029690 None:intergenic 40.0%
GTTTGGTTGTCAAATGGTTC+TGG - Chr1:7030219-7030238 MsG0180000503.01.T01:intron 40.0%
TCGTTTCCTGATGACAATCA+AGG - Chr1:7031725-7031744 MsG0180000503.01.T01:five_prime_UTR 40.0%
TGAATCTGCAAAGCAACAGA+AGG + Chr1:7028498-7028517 None:intergenic 40.0%
TGCATATGTGGTTGTGTTGT+CGG - Chr1:7028123-7028142 MsG0180000503.01.T01:intron 40.0%
TGGCTGAAATGGCAATTGTT+TGG - Chr1:7031321-7031340 MsG0180000503.01.T01:intron 40.0%
TGGGAAATTGAGGATAGATG+CGG - Chr1:7027728-7027747 MsG0180000503.01.T01:intron 40.0%
TGGGATGTTTGTCTCAAATG+AGG - Chr1:7030944-7030963 MsG0180000503.01.T01:intron 40.0%
TGGTAGTACACACAGTTACA+AGG + Chr1:7031838-7031857 None:intergenic 40.0%
TGTCAGAAATGAATTTCGGG+TGG + Chr1:7029847-7029866 None:intergenic 40.0%
TGTTATATGCAGGGTGGAAA+TGG - Chr1:7030122-7030141 MsG0180000503.01.T01:intron 40.0%
TTAAACCCCGAGAATAACCA+TGG + Chr1:7028207-7028226 None:intergenic 40.0%
TTCACAAATTGCCTATGGTG+CGG - Chr1:7029609-7029628 MsG0180000503.01.T01:intron 40.0%
TTGACCAGTGTTGTCTATGA+TGG - Chr1:7029530-7029549 MsG0180000503.01.T01:intron 40.0%
TTGATATGCTGCTGCATATG+TGG - Chr1:7028111-7028130 MsG0180000503.01.T01:intron 40.0%
TTGGATAAGACATTAGGGCA+GGG + Chr1:7031564-7031583 None:intergenic 40.0%
TTTACAGGAACTTGGAGAGT+CGG - Chr1:7030664-7030683 MsG0180000503.01.T01:intron 40.0%
! CGCAATGAAGTGTTATATGG+CGG + Chr1:7029562-7029581 None:intergenic 40.0%
! CGTTTGCTTGTTGCAAATGT+TGG - Chr1:7030087-7030106 MsG0180000503.01.T01:intron 40.0%
! GCAACTGCAATTGTAGGTTT+TGG + Chr1:7028348-7028367 None:intergenic 40.0%
! GGAAAAGTGGGTCTGTTTTA+TGG + Chr1:7026999-7027018 None:intergenic 40.0%
! GTTTGTTGCCGTTTGTATTG+TGG - Chr1:7028053-7028072 MsG0180000503.01.T01:intron 40.0%
! TGATGAAGAAGCGTATCAAG+AGG - Chr1:7031672-7031691 MsG0180000503.01.T01:five_prime_UTR 40.0%
! TTTGGTCTGGTTTGTGATCT+CGG + Chr1:7030519-7030538 None:intergenic 40.0%
!! AAGCCTAGAAGCATTGCATA+AGG + Chr1:7029151-7029170 None:intergenic 40.0%
!! GAAGTGTTATATGGCGGATT+TGG + Chr1:7029556-7029575 None:intergenic 40.0%
!! GTTTGTTGCCTTTTGTGTTG+TGG - Chr1:7027878-7027897 MsG0180000503.01.T01:CDS 40.0%
!! TCCATCTGGTTTCCTAGTTT+TGG - Chr1:7032113-7032132 MsG0180000503.01.T01:five_prime_UTR 40.0%
!! TCCATGCTACTTATTTTCGG+AGG - Chr1:7028943-7028962 MsG0180000503.01.T01:intron 40.0%
!!! CGTTACTTTTCGGCTTTGTT+TGG - Chr1:7027566-7027585 MsG0180000503.01.T01:intron 40.0%
!!! GGCCTTTTTGGAGTTTTTGA+TGG - Chr1:7028883-7028902 MsG0180000503.01.T01:intron 40.0%
AAACCAGACCAAACGATGAG+AGG - Chr1:7030526-7030545 MsG0180000503.01.T01:intron 45.0%
ACATGCACGCACACATAAAG+AGG - Chr1:7029194-7029213 MsG0180000503.01.T01:intron 45.0%
ACTCCAGAGCTGTTATATGC+AGG - Chr1:7030112-7030131 MsG0180000503.01.T01:intron 45.0%
AGGAAACCAGATGGACAACA+AGG + Chr1:7032108-7032127 None:intergenic 45.0%
AGGCAAAGGATAGAAGATGC+GGG - Chr1:7030546-7030565 MsG0180000503.01.T01:intron 45.0%
ATAAGACATTAGGGCAGGGT+TGG + Chr1:7031560-7031579 None:intergenic 45.0%
ATCCTTTGCCTCTCATCGTT+TGG + Chr1:7030537-7030556 None:intergenic 45.0%
ATGCAGAAGAAGCAGCAAAG+AGG - Chr1:7031648-7031667 MsG0180000503.01.T01:five_prime_UTR 45.0%
CAAACGGTCACCAACAAGAA+TGG + Chr1:7030073-7030092 None:intergenic 45.0%
CATATGTGGTTGTGTTGTCG+GGG - Chr1:7028125-7028144 MsG0180000503.01.T01:intron 45.0%
CATTGAAGATCTCTTGCCAG+GGG + Chr1:7028815-7028834 None:intergenic 45.0%
CCATTGAAGATCTCTTGCCA+GGG + Chr1:7028816-7028835 None:intergenic 45.0%
CCTACAATTGCAGTTGCAGA+AGG - Chr1:7028351-7028370 MsG0180000503.01.T01:intron 45.0%
CCTTCTGCAACTGCAATTGT+AGG + Chr1:7028354-7028373 None:intergenic 45.0%
CTCCAGAGCTGTTATATGCA+GGG - Chr1:7030113-7030132 MsG0180000503.01.T01:intron 45.0%
GAGGCAAAGGATAGAAGATG+CGG - Chr1:7030545-7030564 MsG0180000503.01.T01:intron 45.0%
GATGATACACCTGTTAGTGG+TGG - Chr1:7027205-7027224 MsG0180000503.01.T01:intron 45.0%
GCAATTCCATTCCCCCTTAA+CGG - Chr1:7029643-7029662 MsG0180000503.01.T01:intron 45.0%
GCACCATAGGCAATTTGTGA+AGG + Chr1:7029610-7029629 None:intergenic 45.0%
GCATATGTGGTTGTGTTGTC+GGG - Chr1:7028124-7028143 MsG0180000503.01.T01:intron 45.0%
GCTGATGATACACCTGTTAG+TGG - Chr1:7027202-7027221 MsG0180000503.01.T01:intron 45.0%
GCTTCTTCTGCATCCTCAAT+TGG + Chr1:7031641-7031660 None:intergenic 45.0%
GTGTACTACCATGCAAGCAT+AGG - Chr1:7031847-7031866 MsG0180000503.01.T01:intron 45.0%
GTTGGATAAGACATTAGGGC+AGG + Chr1:7031565-7031584 None:intergenic 45.0%
TAACACTTCATTGCGGCCTA+TGG - Chr1:7029567-7029586 MsG0180000503.01.T01:intron 45.0%
TCCATTGAAGATCTCTTGCC+AGG + Chr1:7028817-7028836 None:intergenic 45.0%
TCTGCATGTAAATGTGGTGG+TGG - Chr1:7032019-7032038 MsG0180000503.01.T01:intron 45.0%
TCTTCGTCTCGTAATAGCTC+TGG - Chr1:7031749-7031768 MsG0180000503.01.T01:five_prime_UTR 45.0%
TGGTTGTGATATGGTTTCGG+AGG - Chr1:7028319-7028338 MsG0180000503.01.T01:intron 45.0%
TGTTCTGTCACCTTCAAGTC+AGG - Chr1:7027171-7027190 MsG0180000503.01.T01:CDS 45.0%
TTCTGACACCAATCTGCCAT+AGG - Chr1:7029859-7029878 MsG0180000503.01.T01:intron 45.0%
TTGCGGTTGTATGTTGTACG+AGG - Chr1:7027339-7027358 MsG0180000503.01.T01:intron 45.0%
TTGGCCATCATAGACAACAC+TGG + Chr1:7029537-7029556 None:intergenic 45.0%
TTGGTATGCGGTTGCAATTG+TGG - Chr1:7028299-7028318 MsG0180000503.01.T01:intron 45.0%
TTGTATGTGGGTGGCTGAAA+TGG - Chr1:7031310-7031329 MsG0180000503.01.T01:intron 45.0%
TTGTTGCTGATCCGAAATCC+AGG - Chr1:7030740-7030759 MsG0180000503.01.T01:intron 45.0%
! ACAAGAATTGACGGCGTTGA+TGG - Chr1:7028850-7028869 MsG0180000503.01.T01:intron 45.0%
! ATTTGTGAAGGCATGCTCCA+TGG + Chr1:7029598-7029617 None:intergenic 45.0%
! GCATTGTGGTTGTGTTGTTG+AGG - Chr1:7027753-7027772 MsG0180000503.01.T01:intron 45.0%
! GGCCGCAATGAAGTGTTATA+TGG + Chr1:7029565-7029584 None:intergenic 45.0%
! TGGTTTGTGATCTCGGGAAA+CGG + Chr1:7030512-7030531 None:intergenic 45.0%
! TTGGTCTGGTTTGTGATCTC+GGG + Chr1:7030518-7030537 None:intergenic 45.0%
!! AGAAAGTACCTTAGGGAGAG+AGG + Chr1:7026782-7026801 None:intergenic 45.0%
!! CAGGCTCTAAAATCGAACCA+AGG - Chr1:7031497-7031516 MsG0180000503.01.T01:intron 45.0%
!! TTTCGGAGGTGCTAAGCTAA+GGG - Chr1:7028957-7028976 MsG0180000503.01.T01:intron 45.0%
!!! CTTTTTTCGAACACCGTCTC+AGG - Chr1:7029307-7029326 MsG0180000503.01.T01:intron 45.0%
!!! TTTTCGGAGGTGCTAAGCTA+AGG - Chr1:7028956-7028975 MsG0180000503.01.T01:intron 45.0%
!! AAAAAAAAAATAATAATTAC+AGG + Chr1:7029404-7029423 None:intergenic 5.0%
CAAAGGATAGAAGATGCGGG+AGG - Chr1:7030549-7030568 MsG0180000503.01.T01:intron 50.0%
CACCCTGCATATAACAGCTC+TGG + Chr1:7030118-7030137 None:intergenic 50.0%
CAGAGCTGTTATATGCAGGG+TGG - Chr1:7030116-7030135 MsG0180000503.01.T01:intron 50.0%
CCAGATGGACAACAAGGACA+AGG + Chr1:7032102-7032121 None:intergenic 50.0%
CCATGAGAGAGAGAGAGAGA+GGG + Chr1:7026747-7026766 None:intergenic 50.0%
CCATTGTGGTTGTGTTGCAG+AGG + Chr1:7027414-7027433 None:intergenic 50.0%
CCCTGGCAAGAGATCTTCAA+TGG - Chr1:7028813-7028832 MsG0180000503.01.T01:intron 50.0%
CCTCTGCAACACAACCACAA+TGG - Chr1:7027411-7027430 MsG0180000503.01.T01:intron 50.0%
GACCAAACGATGAGAGGCAA+AGG - Chr1:7030532-7030551 MsG0180000503.01.T01:intron 50.0%
GATACACCTGTTAGTGGTGG+AGG - Chr1:7027208-7027227 MsG0180000503.01.T01:intron 50.0%
GCTTCCACTGCCATTCTTGT+TGG - Chr1:7030060-7030079 MsG0180000503.01.T01:intron 50.0%
GTCACCAACAAGAATGGCAG+TGG + Chr1:7030067-7030086 None:intergenic 50.0%
TATGGATATGCTAGCTCCCC+TGG - Chr1:7028796-7028815 MsG0180000503.01.T01:CDS 50.0%
TCTCTTCTCCTCTCTCCCTA+AGG - Chr1:7026771-7026790 MsG0180000503.01.T01:three_prime_UTR 50.0%
TTGCCTCTCATCGTTTGGTC+TGG + Chr1:7030532-7030551 None:intergenic 50.0%
! CCTTGTCCTTGTTGTCCATC+TGG - Chr1:7032099-7032118 MsG0180000503.01.T01:five_prime_UTR 50.0%
! GCAGCATGAACCTGACTTGA+AGG + Chr1:7027184-7027203 None:intergenic 50.0%
! TTTTCGAACACCGTCTCAGG+AGG - Chr1:7029310-7029329 MsG0180000503.01.T01:intron 50.0%
!! CTTGCTGTTTCTCGCGCATT+TGG - Chr1:7030694-7030713 MsG0180000503.01.T01:intron 50.0%
!!! GGCGAAGTTGTTGGCCTTTT+TGG - Chr1:7028871-7028890 MsG0180000503.01.T01:intron 50.0%
ACAGGAACTTGGAGAGTCGG+TGG - Chr1:7030667-7030686 MsG0180000503.01.T01:intron 55.0%
AGATGCGGGAGGCTTGTATG+TGG - Chr1:7030560-7030579 MsG0180000503.01.T01:intron 55.0%
ATGGCACCGTTAAGGGGGAA+TGG + Chr1:7029652-7029671 None:intergenic 55.0%
CACAATGGCTGCAGCATCTG+CGG - Chr1:7027426-7027445 MsG0180000503.01.T01:intron 55.0%
CCCTCTCTCTCTCTCTCTCA+TGG - Chr1:7026744-7026763 MsG0180000503.01.T01:three_prime_UTR 55.0%
CGGGAAACGGCAATGGCTAA+AGG + Chr1:7030499-7030518 None:intergenic 55.0%
GATGCGGGAGGCTTGTATGT+GGG - Chr1:7030561-7030580 MsG0180000503.01.T01:intron 55.0%
GCAACAAACAGGCATCCGCA+TGG + Chr1:7028042-7028061 None:intergenic 55.0%
GCCATGAGAGAGAGAGAGAG+AGG + Chr1:7026748-7026767 None:intergenic 55.0%
GGATAGATGCGGCTGCATTG+TGG - Chr1:7027739-7027758 MsG0180000503.01.T01:intron 55.0%
GTGATCTCGGGAAACGGCAA+TGG + Chr1:7030506-7030525 None:intergenic 55.0%
TGTGGCCATGGCACCGTTAA+GGG + Chr1:7029659-7029678 None:intergenic 55.0%
TTGTGGCCATGGCACCGTTA+AGG + Chr1:7029660-7029679 None:intergenic 55.0%
! ATTCCCCCTTAACGGTGCCA+TGG - Chr1:7029651-7029670 MsG0180000503.01.T01:intron 55.0%
!! ACTGGCTAGTGACGGACTGT+GGG - Chr1:7030925-7030944 MsG0180000503.01.T01:intron 55.0%
!! GGCGTTGATGGCGAAGTTGT+TGG - Chr1:7028862-7028881 MsG0180000503.01.T01:intron 55.0%
!! TACTGGCTAGTGACGGACTG+TGG - Chr1:7030924-7030943 MsG0180000503.01.T01:intron 55.0%
ATGCTCCATGGCAGCGCCAT+AGG + Chr1:7029586-7029605 None:intergenic 60.0%
CCTGAGCCTCCACCACTAAC+AGG + Chr1:7027217-7027236 None:intergenic 60.0%
CGCAGATGCTGCAGCCATTG+TGG + Chr1:7027428-7027447 None:intergenic 60.0%
GTGGCCATGGCACCGTTAAG+GGG + Chr1:7029658-7029677 None:intergenic 60.0%
TGGCCATGGCACCGTTAAGG+GGG + Chr1:7029657-7029676 None:intergenic 60.0%
! CCTGTTAGTGGTGGAGGCTC+AGG - Chr1:7027214-7027233 MsG0180000503.01.T01:intron 60.0%
CATCTGCGGTTGCGCTGTCG+AGG - Chr1:7027440-7027459 MsG0180000503.01.T01:intron 65.0%
CGGGAGGCTTGTATGTGGGC+TGG - Chr1:7030565-7030584 MsG0180000503.01.T01:intron 65.0%
TGCGGCCTATGGCGCTGCCA+TGG - Chr1:7029578-7029597 MsG0180000503.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 7026640 7032175 7026640 ID=MsG0180000503.01;Name=MsG0180000503.01
Chr1 mRNA 7026640 7032175 7026640 ID=MsG0180000503.01.T01;Parent=MsG0180000503.01;Name=MsG0180000503.01.T01;_AED=0.12;_eAED=0.12;_QI=413|0.6|1|1|0.2|0.33|6|478|144
Chr1 exon 7032023 7032175 7032023 ID=MsG0180000503.01.T01:exon:2295;Parent=MsG0180000503.01.T01
Chr1 exon 7031580 7031834 7031580 ID=MsG0180000503.01.T01:exon:2296;Parent=MsG0180000503.01.T01
Chr1 exon 7029911 7030038 7029911 ID=MsG0180000503.01.T01:exon:2297;Parent=MsG0180000503.01.T01
Chr1 exon 7028672 7028827 7028672 ID=MsG0180000503.01.T01:exon:2298;Parent=MsG0180000503.01.T01
Chr1 exon 7027850 7027924 7027850 ID=MsG0180000503.01.T01:exon:2299;Parent=MsG0180000503.01.T01
Chr1 exon 7026640 7027198 7026640 ID=MsG0180000503.01.T01:exon:2300;Parent=MsG0180000503.01.T01
Chr1 five_prime_UTR 7032023 7032175 7032023 ID=MsG0180000503.01.T01:five_prime_utr;Parent=MsG0180000503.01.T01
Chr1 five_prime_UTR 7031580 7031834 7031580 ID=MsG0180000503.01.T01:five_prime_utr;Parent=MsG0180000503.01.T01
Chr1 five_prime_UTR 7030034 7030038 7030034 ID=MsG0180000503.01.T01:five_prime_utr;Parent=MsG0180000503.01.T01
Chr1 CDS 7029911 7030033 7029911 ID=MsG0180000503.01.T01:cds;Parent=MsG0180000503.01.T01
Chr1 CDS 7028672 7028827 7028672 ID=MsG0180000503.01.T01:cds;Parent=MsG0180000503.01.T01
Chr1 CDS 7027850 7027924 7027850 ID=MsG0180000503.01.T01:cds;Parent=MsG0180000503.01.T01
Chr1 CDS 7027118 7027198 7027118 ID=MsG0180000503.01.T01:cds;Parent=MsG0180000503.01.T01
Chr1 three_prime_UTR 7026640 7027117 7026640 ID=MsG0180000503.01.T01:three_prime_utr;Parent=MsG0180000503.01.T01
Gene Sequence

>MsG0180000503.01.T01

ATGGAAAATTCAGCTATGGATATGCTAGCTCCCCTGGCAAGAGATCTTCAATGGAAGATTTTTATGAGACAAGAATTGACGGCGTTGATGGCGAAGTTGTTGGCCTTTTTGGAGTTTTTGATGCTGATGCGTATACGCATACCGACTCTGATGTCTGAAATCAAGAATAATCAAAACAGAGATGCTGGATCAACTGCTTCCACTGCCATTCTTGTTGGTGACCGTTTGCTTGTTGCAAATGTTGGGGACTCCAGAGCTGTTATATGCAGGGTGGAAATGGAAGAAAAGTCGATAGTTCTCTTGAGTTTCTTATACTGGCTAGTGACGGACTGTGGGATGTTTGTCTCAAATGAGGAAGCTGTTGCTATGATTAAACCAATTGAGGATGCAGAAGAAGCAGCAAAGAGGCTGATGAAGAAGCGTATCAAGAGGTAG

Protein sequence

>MsG0180000503.01.T01

MENSAMDMLAPLARDLQWKIFMRQELTALMAKLLAFLEFLMLMRIRIPTLMSEIKNNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRVEMEEKSIVLLSFLYWLVTDCGMFVSNEEAVAMIKPIEDAEEAAKRLMKKRIKR*