AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0080049032.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080049032.01.T01 MTR_4g134630 87.023 262 3 1 82 312 41 302 5.13e-167 466
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0080049032.01.T01 AT2G02570 59.489 274 66 3 81 312 29 299 2.87e-114 332
MsG0080049032.01.T01 AT2G02570 59.489 274 66 3 81 312 29 299 2.87e-114 332
MsG0080049032.01.T01 AT2G02570 59.489 274 66 3 81 312 29 299 2.87e-114 332
MsG0080049032.01.T01 AT2G02570 55.839 274 64 4 81 312 29 287 1.64e-103 305

Find 3 sgRNAs with CRISPR-Local

Find 625 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTACATCATTCTTTATTGA+TGG 0.282046 contig621end:+19980 None:intergenic
CATTCTTTATTGATGGATCA+AGG 0.411748 contig621end:+19987 None:intergenic
GGATCAAGGAAAAGCATCTG+AGG 0.596293 contig621end:+20001 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATTATATTTTTTATTAA+AGG - contig621end:14507-14526 MsG0080049032.01.T01:intron 0.0%
!! GTTTAAACTATTATTAATAT+TGG - contig621end:14048-14067 MsG0080049032.01.T01:intron 10.0%
!! TTTATTAATCATGTTAAATT+GGG + contig621end:20000-20019 None:intergenic 10.0%
!! TTTATTGAAAAAAGAATATA+AGG - contig621end:19509-19528 MsG0080049032.01.T01:intron 10.0%
!!! AATAAAAATGAATATTTTGT+AGG - contig621end:18378-18397 MsG0080049032.01.T01:intron 10.0%
!!! ATAAAAATGAATATTTTGTA+GGG - contig621end:18379-18398 MsG0080049032.01.T01:intron 10.0%
!!! TGATTTAGTTTTTATATTTT+TGG - contig621end:14077-14096 MsG0080049032.01.T01:intron 10.0%
!!! TTTTCTTGTTAATTAATAAT+GGG + contig621end:16869-16888 None:intergenic 10.0%
!! AAATAGATAAATAATGTTGT+TGG + contig621end:17026-17045 None:intergenic 15.0%
!! GTTTATTAATCATGTTAAAT+TGG + contig621end:20001-20020 None:intergenic 15.0%
!! TACTATCTTTCAATATAAAA+TGG - contig621end:11632-11651 MsG0080049032.01.T01:intron 15.0%
!! TATAACATGAATATTTCTTT+GGG - contig621end:14380-14399 MsG0080049032.01.T01:intron 15.0%
!! TATAGACGATTTAATAAAAA+AGG + contig621end:10449-10468 None:intergenic 15.0%
!! TGAAAAATATTGCAATATTA+TGG + contig621end:12410-12429 None:intergenic 15.0%
!! TGAATAAATAAACCATTTAT+AGG + contig621end:16240-16259 None:intergenic 15.0%
!! TTATAACATGAATATTTCTT+TGG - contig621end:14379-14398 MsG0080049032.01.T01:intron 15.0%
!! TTATTAATTATGTCATATGA+GGG - contig621end:14687-14706 MsG0080049032.01.T01:intron 15.0%
!! TTTATTAATTATGTCATATG+AGG - contig621end:14686-14705 MsG0080049032.01.T01:intron 15.0%
!!! AAACTCATTATAAAATTTTC+TGG - contig621end:17836-17855 MsG0080049032.01.T01:intron 15.0%
!!! AAATATTTTCAAAATACAGA+AGG - contig621end:11073-11092 MsG0080049032.01.T01:CDS 15.0%
!!! AACAATAAAAAGTATTTTAC+TGG - contig621end:18087-18106 MsG0080049032.01.T01:intron 15.0%
!!! CTATTTTAAGATTATTGTTT+TGG - contig621end:19937-19956 MsG0080049032.01.T01:intron 15.0%
!!! GACTTTTCATTTTTAAATTA+AGG - contig621end:13092-13111 MsG0080049032.01.T01:intron 15.0%
!!! GTTGTTATTATTAATTGAAT+GGG + contig621end:16847-16866 None:intergenic 15.0%
!!! GTTTGTTTCTTTTTTTTTTA+GGG - contig621end:16583-16602 MsG0080049032.01.T01:intron 15.0%
!!! GTTTTCTTGTTAATTAATAA+TGG + contig621end:16870-16889 None:intergenic 15.0%
!!! TAAAAATGTTGAATTTTGTA+GGG - contig621end:12218-12237 MsG0080049032.01.T01:intron 15.0%
!!! TTAAAAATGTTGAATTTTGT+AGG - contig621end:12217-12236 MsG0080049032.01.T01:intron 15.0%
!!! TTTTAAATTTAGAAACAAAC+CGG - contig621end:15035-15054 MsG0080049032.01.T01:intron 15.0%
!!! TTTTGTTTTATTTTCATAAC+AGG - contig621end:12337-12356 MsG0080049032.01.T01:intron 15.0%
!!! TTTTTAATTTAGAAACAAAC+CGG + contig621end:14774-14793 None:intergenic 15.0%
!!! TTTTTTACTCAAGATATTAT+AGG + contig621end:13838-13857 None:intergenic 15.0%
!!! TTTTTTTACAATAGAAGAAT+AGG + contig621end:14449-14468 None:intergenic 15.0%
!! AAAAAATAGATGTTCAATAG+AGG + contig621end:10153-10172 None:intergenic 20.0%
!! AAAAATCAATGAAACATTTC+CGG - contig621end:14752-14771 MsG0080049032.01.T01:intron 20.0%
!! AAAACTCAATAAAACATTTC+CGG + contig621end:15057-15076 None:intergenic 20.0%
!! AAAACTCATAAAAGTGATTT+AGG - contig621end:15953-15972 MsG0080049032.01.T01:intron 20.0%
!! AAAACTTAGCAAATGAAATT+CGG - contig621end:15903-15922 MsG0080049032.01.T01:intron 20.0%
!! AAATAAGAGAATAAATGTTG+TGG + contig621end:15374-15393 None:intergenic 20.0%
!! AAATCATAAACAAATAGTCA+CGG + contig621end:14275-14294 None:intergenic 20.0%
!! AACATGGAAAGAAAAAAAAA+AGG + contig621end:17601-17620 None:intergenic 20.0%
!! AATAAAGGGAAAATATCATT+CGG + contig621end:15631-15650 None:intergenic 20.0%
!! AATAGAAGAATAGGAAAATA+GGG + contig621end:14440-14459 None:intergenic 20.0%
!! AATATTAAATCGTCTATATG+AGG - contig621end:10245-10264 MsG0080049032.01.T01:CDS 20.0%
!! AGAACACTTGTTTATATAAA+AGG + contig621end:18285-18304 None:intergenic 20.0%
!! AGATAGTAATAAAAAGATTG+AGG + contig621end:11620-11639 None:intergenic 20.0%
!! AGTCCATTAAATTTATGATA+AGG + contig621end:13581-13600 None:intergenic 20.0%
!! ATAATACAAGCATAAGTAAT+TGG - contig621end:10799-10818 MsG0080049032.01.T01:intron 20.0%
!! ATATAAAACACAAATATCAG+TGG + contig621end:19559-19578 None:intergenic 20.0%
!! ATATTAAATCGTCTATATGA+GGG - contig621end:10246-10265 MsG0080049032.01.T01:CDS 20.0%
!! ATCAAAGTAGTAAAAAATGT+GGG - contig621end:16106-16125 MsG0080049032.01.T01:intron 20.0%
!! GAACCTTATCATAAATTTAA+TGG - contig621end:13575-13594 MsG0080049032.01.T01:intron 20.0%
!! GATTTAATAAAAAAGGCAAA+GGG + contig621end:10442-10461 None:intergenic 20.0%
!! TAAAAATAAACCCAGAATAA+TGG + contig621end:11765-11784 None:intergenic 20.0%
!! TAAAACCTTAAATGCTAAAA+AGG - contig621end:15184-15203 MsG0080049032.01.T01:intron 20.0%
!! TAATGCAATGGTAAATAAAT+TGG + contig621end:17567-17586 None:intergenic 20.0%
!! TAATTAATATTAGTGAGAGT+TGG + contig621end:17075-17094 None:intergenic 20.0%
!! TAATTTAAAAAAACGCTCTT+TGG - contig621end:14294-14313 MsG0080049032.01.T01:intron 20.0%
!! TATAAAAAAAAATACTCCAG+TGG - contig621end:18420-18439 MsG0080049032.01.T01:intron 20.0%
!! TATAATGCTGAAGAAAAAAA+CGG + contig621end:17765-17784 None:intergenic 20.0%
!! TATCAAAGTAGTAAAAAATG+TGG - contig621end:16105-16124 MsG0080049032.01.T01:intron 20.0%
!! TCAAAATATTGTATGTGTTA+AGG - contig621end:11226-11245 MsG0080049032.01.T01:intron 20.0%
!! TGAGAAATATTACCTATAAA+TGG - contig621end:16225-16244 MsG0080049032.01.T01:intron 20.0%
!! TGATACTATATTACATACTT+CGG + contig621end:16090-16109 None:intergenic 20.0%
!! TGTTAAAAGTAAAAATGTGA+TGG + contig621end:13758-13777 None:intergenic 20.0%
!! TGTTTCTTTCTATTTGTAAA+TGG + contig621end:15523-15542 None:intergenic 20.0%
!! TTGAATTTGAATATGAATCA+GGG - contig621end:12141-12160 MsG0080049032.01.T01:intron 20.0%
!! TTTACATCATTCTTTATTGA+TGG + contig621end:10043-10062 None:intergenic 20.0%
!!! AAAAATTAATTTTTGTGCTG+GGG + contig621end:12484-12503 None:intergenic 20.0%
!!! AAATGTTTTATTCACATTTC+CGG + contig621end:15016-15035 None:intergenic 20.0%
!!! AATTGTTTTTCATCTCATTT+AGG - contig621end:14478-14497 MsG0080049032.01.T01:intron 20.0%
!!! ACAAAAATTAATTTTTGTGC+TGG + contig621end:12507-12488 None:intergenic 20.0%
!!! ACCTGTTTTTATAAAATGTA+GGG - contig621end:18331-18350 MsG0080049032.01.T01:intron 20.0%
!!! ACTGGAGTATTTTTTTTTAT+AGG + contig621end:18421-18440 None:intergenic 20.0%
!!! AGCTAAAAAATATTTTCACA+TGG + contig621end:19394-19413 None:intergenic 20.0%
!!! AGTTTTTCGAAATTGAATTT+TGG - contig621end:15071-15090 MsG0080049032.01.T01:intron 20.0%
!!! ATTAATGTTTGCTATTGAAA+GGG - contig621end:18173-18192 MsG0080049032.01.T01:intron 20.0%
!!! ATTTTTCCGAAATTGAATTT+TGG + contig621end:14738-14757 None:intergenic 20.0%
!!! CAAAAATTAATTTTTGTGCT+GGG + contig621end:12485-12504 None:intergenic 20.0%
!!! CTGGAGTATTTTTTTTTATA+GGG + contig621end:18420-18439 None:intergenic 20.0%
!!! GGTTGTTATTATTAATTGAA+TGG + contig621end:16848-16867 None:intergenic 20.0%
!!! GGTTTGTTTCTTTTTTTTTT+AGG - contig621end:16582-16601 MsG0080049032.01.T01:intron 20.0%
!!! GTCTTAATAAATATTTTCCT+TGG - contig621end:18740-18759 MsG0080049032.01.T01:intron 20.0%
!!! GTTCTGTTTTTTTATGAATA+AGG + contig621end:13376-13395 None:intergenic 20.0%
!!! TACCTGTTTTTATAAAATGT+AGG - contig621end:18330-18349 MsG0080049032.01.T01:intron 20.0%
!!! TGTTTTTTCTTTCTTTTGAA+AGG + contig621end:13881-13900 None:intergenic 20.0%
!!! TTATATTTTTGGTGTAAACT+GGG - contig621end:14088-14107 MsG0080049032.01.T01:intron 20.0%
!!! TTATTTTTAGCTGTTTTCAT+AGG + contig621end:10952-10971 None:intergenic 20.0%
!!! TTCTTTTTTTTTTAGGGTTA+GGG - contig621end:16589-16608 MsG0080049032.01.T01:intron 20.0%
!!! TTTATATTTTTGGTGTAAAC+TGG - contig621end:14087-14106 MsG0080049032.01.T01:intron 20.0%
!!! TTTCTTTTTTTTTTAGGGTT+AGG - contig621end:16588-16607 MsG0080049032.01.T01:intron 20.0%
!!! TTTTTAGTTACTGATTTTCA+AGG - contig621end:18445-18464 MsG0080049032.01.T01:intron 20.0%
! AAAACTAATACAACCATTTC+CGG + contig621end:15099-15118 None:intergenic 25.0%
! AAAAGGTAGGAAACTAAAAA+GGG + contig621end:18268-18287 None:intergenic 25.0%
! AAATAAGTTTCCCAGAAATA+CGG - contig621end:14650-14669 MsG0080049032.01.T01:intron 25.0%
! AAATCTATATATATCCCTTC+CGG - contig621end:14828-14847 MsG0080049032.01.T01:intron 25.0%
! AATAGTAGAGAAATTGACAA+AGG + contig621end:19055-19074 None:intergenic 25.0%
! AATGCTAAAAAGGACAAAAT+TGG - contig621end:15194-15213 MsG0080049032.01.T01:intron 25.0%
! ACGAAAAAAAGTAGAAGATA+AGG - contig621end:15316-15335 MsG0080049032.01.T01:intron 25.0%
! ACTAATGATACAACTAACTT+AGG + contig621end:15802-15821 None:intergenic 25.0%
! AGAAAAGAAAAGAAAAACCT+CGG + contig621end:16735-16754 None:intergenic 25.0%
! AGACAGATTCATAATTCTAT+AGG + contig621end:18217-18236 None:intergenic 25.0%
! AGGGTCCAAAAAATATATAT+AGG + contig621end:18249-18268 None:intergenic 25.0%
! CAATAGAAGAATAGGAAAAT+AGG + contig621end:14441-14460 None:intergenic 25.0%
! CACTTGTTTATATAAAAGGT+AGG + contig621end:18281-18300 None:intergenic 25.0%
! CATATTTCATTTGTGTACTT+AGG + contig621end:10993-11012 None:intergenic 25.0%
! CGAAAAAAAGTAGAAGATAA+GGG - contig621end:15317-15336 MsG0080049032.01.T01:intron 25.0%
! CGATTTAATAAAAAAGGCAA+AGG + contig621end:10443-10462 None:intergenic 25.0%
! CTATTTGTAAATGGTAGAAA+TGG + contig621end:15514-15533 None:intergenic 25.0%
! CTTGAATTTGAATATGAATC+AGG - contig621end:12140-12159 MsG0080049032.01.T01:intron 25.0%
! GAAATATCAGAATTTAGAAG+AGG + contig621end:12860-12879 None:intergenic 25.0%
! GACAGATTCATAATTCTATA+GGG + contig621end:18216-18235 None:intergenic 25.0%
! GCTTCAAATTGAAATTGAAA+AGG - contig621end:16804-16823 MsG0080049032.01.T01:intron 25.0%
! GGGTCCAAAAAATATATATA+GGG + contig621end:18248-18267 None:intergenic 25.0%
! GTTTGTATATTCTTTGTACA+TGG + contig621end:16029-16048 None:intergenic 25.0%
! TAAAAGGTAGGAAACTAAAA+AGG + contig621end:18269-18288 None:intergenic 25.0%
! TAATACCCGAAATAGTTTAA+AGG - contig621end:14866-14885 MsG0080049032.01.T01:intron 25.0%
! TATGTCTTAAAGTGACTAAT+GGG - contig621end:19151-19170 MsG0080049032.01.T01:intron 25.0%
! TATTAAATCGTCTATATGAG+GGG - contig621end:10247-10266 MsG0080049032.01.T01:CDS 25.0%
! TCAAGTCCTTTAAACTATTT+CGG + contig621end:14875-14894 None:intergenic 25.0%
! TGATGAGTAATGAATAGATT+CGG + contig621end:17280-17299 None:intergenic 25.0%
! TTAGTTGAGAAAAGAAATAG+AGG - contig621end:17949-17968 MsG0080049032.01.T01:intron 25.0%
! TTATACACCAAAAACCTTTA+GGG - contig621end:13035-13054 MsG0080049032.01.T01:intron 25.0%
! TTCACAAATTAGTAACAAAC+CGG - contig621end:14994-15013 MsG0080049032.01.T01:intron 25.0%
! TTCTCAACTAAACAAAAAAC+TGG + contig621end:17940-17959 None:intergenic 25.0%
! TTGTTTGTAAGTAGAAAGAT+TGG + contig621end:16551-16570 None:intergenic 25.0%
! TTTATACACCAAAAACCTTT+AGG - contig621end:13034-13053 MsG0080049032.01.T01:intron 25.0%
!! AAATTTTACTGACAGAAGTT+AGG - contig621end:11863-11882 MsG0080049032.01.T01:intron 25.0%
!! AATTTTACTGACAGAAGTTA+GGG - contig621end:11864-11883 MsG0080049032.01.T01:intron 25.0%
!! ACGTTTCTGAAAATGTAAAA+CGG - contig621end:14805-14824 MsG0080049032.01.T01:intron 25.0%
!! ATAAATTCAACAACTTTTCC+AGG + contig621end:19494-19513 None:intergenic 25.0%
!! ATTCAAATTTTGTAGAGCTT+TGG - contig621end:16255-16274 MsG0080049032.01.T01:intron 25.0%
!! ATTGTGAAAATTCTAGAGAT+CGG + contig621end:19536-19555 None:intergenic 25.0%
!! TAAATTCAACAACTTTTCCA+GGG + contig621end:19493-19512 None:intergenic 25.0%
!! TATACAAACATTAGTTTCCT+TGG + contig621end:10907-10926 None:intergenic 25.0%
!! TTTTCTGCAAATGTATTTCT+TGG - contig621end:18806-18825 MsG0080049032.01.T01:intron 25.0%
!!! AAACATCTAGTTTCATCTTT+TGG - contig621end:13896-13915 MsG0080049032.01.T01:intron 25.0%
!!! AAATGGTTGTATTAGTTTTC+CGG - contig621end:15100-15119 MsG0080049032.01.T01:intron 25.0%
!!! AAATTCTTGTTCGTTGATTT+CGG - contig621end:15877-15896 MsG0080049032.01.T01:intron 25.0%
!!! AAATTTGCTAAGTCACAAAA+AGG - contig621end:15438-15457 MsG0080049032.01.T01:intron 25.0%
!!! AATTTGCTAAGTCACAAAAA+GGG - contig621end:15439-15458 MsG0080049032.01.T01:intron 25.0%
!!! CATTAATGTTTGCTATTGAA+AGG - contig621end:18172-18191 MsG0080049032.01.T01:intron 25.0%
!!! CCTGTTTTTATAAAATGTAG+GGG - contig621end:18332-18351 MsG0080049032.01.T01:intron 25.0%
!!! CTATGTTTTTCACTGTTTTT+AGG - contig621end:17307-17326 MsG0080049032.01.T01:intron 25.0%
!!! TCGTCCCTATATATATTTTT+TGG - contig621end:18241-18260 MsG0080049032.01.T01:intron 25.0%
!!! TTCTAGGATCAATGATATAA+AGG - contig621end:14903-14922 MsG0080049032.01.T01:intron 25.0%
!!! TTTGTCCTTTTTAGCATTTA+AGG + contig621end:15192-15211 None:intergenic 25.0%
!!! TTTTAGAGTTTAAAGCTTGA+TGG + contig621end:16063-16082 None:intergenic 25.0%
AAAGGATGAAACATGTTACA+GGG + contig621end:13863-13882 None:intergenic 30.0%
AAATGGGGTGTAAATGTAAA+AGG - contig621end:16293-16312 MsG0080049032.01.T01:intron 30.0%
AACTAATGTTTGTATACAGG+AGG - contig621end:10911-10930 MsG0080049032.01.T01:intron 30.0%
AAGAAATAGAGGAAAATGGA+AGG - contig621end:13335-13354 MsG0080049032.01.T01:CDS 30.0%
AAGAGATATTGTCTTGTAAG+TGG - contig621end:16170-16189 MsG0080049032.01.T01:intron 30.0%
AATAAGTTTCCCAGAAATAC+GGG - contig621end:14651-14670 MsG0080049032.01.T01:intron 30.0%
AATCACTCATTAAACAACCT+AGG - contig621end:10104-10123 MsG0080049032.01.T01:exon 30.0%
AATCTATTTACCCCTTGAAT+CGG - contig621end:19424-19443 MsG0080049032.01.T01:intron 30.0%
AATGATACAACTAACTTAGG+TGG + contig621end:15799-15818 None:intergenic 30.0%
AATGTGGAAACCATTATTCT+GGG - contig621end:11752-11771 MsG0080049032.01.T01:intron 30.0%
AATTTGACGTGGATATTGAT+TGG - contig621end:14600-14619 MsG0080049032.01.T01:intron 30.0%
ACAATACAGATGCAATAAGT+TGG + contig621end:17730-17749 None:intergenic 30.0%
AGAAAACTGGCAGATAAATT+TGG + contig621end:18861-18880 None:intergenic 30.0%
AGAAATAGAGGAAAATGGAA+GGG - contig621end:13336-13355 MsG0080049032.01.T01:CDS 30.0%
AGGAATGAAATTTCTCAACT+TGG + contig621end:18003-18022 None:intergenic 30.0%
AGGGGCTAAAAATTGTTTAT+AGG - contig621end:18350-18369 MsG0080049032.01.T01:intron 30.0%
ATAAAGAGAAAGAAGATGCA+AGG - contig621end:16466-16485 MsG0080049032.01.T01:intron 30.0%
ATCAAGAGAAAACAGTGTTT+AGG + contig621end:14958-14977 None:intergenic 30.0%
ATCACTCATTAAACAACCTA+GGG - contig621end:10105-10124 MsG0080049032.01.T01:exon 30.0%
ATTACATAAATGCCAGAAAC+CGG + contig621end:14850-14869 None:intergenic 30.0%
ATTTAAGGAGACATTGGAAT+TGG + contig621end:17116-17135 None:intergenic 30.0%
CAAATGAAATTCGGTAAAGA+CGG - contig621end:15912-15931 MsG0080049032.01.T01:intron 30.0%
CAAGTCCTTTAAACTATTTC+GGG + contig621end:14874-14893 None:intergenic 30.0%
CAATCTGCCAAATATAGTTA+TGG + contig621end:12034-12053 None:intergenic 30.0%
CATATTTCATTTGTGTCCTT+AGG + contig621end:11129-11148 None:intergenic 30.0%
CCAGTTCCAAAATTCAATTT+CGG - contig621end:14729-14748 MsG0080049032.01.T01:intron 30.0%
CTTGAAAAGTTGTAGTTATG+TGG - contig621end:10739-10758 MsG0080049032.01.T01:intron 30.0%
GAAATAGTTTAAAGGACTTG+AGG - contig621end:14874-14893 MsG0080049032.01.T01:intron 30.0%
GAATTACAAGTGTTTAGTAG+GGG - contig621end:15216-15235 MsG0080049032.01.T01:intron 30.0%
GGAAACTAATGTTTGTATAC+AGG - contig621end:10908-10927 MsG0080049032.01.T01:intron 30.0%
GGAATTACAAGTGTTTAGTA+GGG - contig621end:15215-15234 MsG0080049032.01.T01:intron 30.0%
GGGTAAAATTTCTTCATAAG+AGG - contig621end:15263-15282 MsG0080049032.01.T01:intron 30.0%
GTAATCAACTAAGTAATGCA+CGG - contig621end:14545-14564 MsG0080049032.01.T01:intron 30.0%
GTATGTCTTAAAGTGACTAA+TGG - contig621end:19150-19169 MsG0080049032.01.T01:intron 30.0%
GTCTTAGACTATAGAGTTTA+AGG - contig621end:13602-13621 MsG0080049032.01.T01:intron 30.0%
GTTACATACATACAATCGAA+GGG + contig621end:19840-19859 None:intergenic 30.0%
TAAATCATAATGCACGGAAT+AGG - contig621end:14406-14425 MsG0080049032.01.T01:intron 30.0%
TAATCAACTAAGTAATGCAC+GGG - contig621end:14546-14565 MsG0080049032.01.T01:intron 30.0%
TAATGATGTAATTGGGAATG+TGG - contig621end:11736-11755 MsG0080049032.01.T01:intron 30.0%
TACAATCGAGAATGATGATT+AGG - contig621end:19798-19817 MsG0080049032.01.T01:intron 30.0%
TAGCTGACATAATAACCATT+TGG + contig621end:17443-17462 None:intergenic 30.0%
TAGTTTCTATGCAAGAATGT+AGG - contig621end:19117-19136 MsG0080049032.01.T01:CDS 30.0%
TATCATTGCAGTCATTAAGT+TGG - contig621end:19312-19331 MsG0080049032.01.T01:intron 30.0%
TATGTTAGGATGGTCAAAAA+TGG + contig621end:19192-19211 None:intergenic 30.0%
TCAACATCTTACCAAAATGT+TGG + contig621end:12171-12190 None:intergenic 30.0%
TCAGTAACTAAAAAAACCAC+TGG + contig621end:18439-18458 None:intergenic 30.0%
TGAAAATGAAAACCAGAAAC+TGG + contig621end:10512-10531 None:intergenic 30.0%
TGAGTATCAAATCATGTAAC+AGG - contig621end:17869-17888 MsG0080049032.01.T01:intron 30.0%
TGCAATGGTAAATAAATTGG+AGG + contig621end:17564-17583 None:intergenic 30.0%
TGGAATTACAAGTGTTTAGT+AGG - contig621end:15214-15233 MsG0080049032.01.T01:intron 30.0%
TGGTTGTCCATAACTATATT+TGG - contig621end:12024-12043 MsG0080049032.01.T01:intron 30.0%
TGTAGAATTTAAGGAGACAT+TGG + contig621end:17122-17141 None:intergenic 30.0%
TGTTACATACATACAATCGA+AGG + contig621end:19841-19860 None:intergenic 30.0%
TGTTGTATGTATCTATCTCA+TGG + contig621end:16975-16994 None:intergenic 30.0%
TGTTTGGTATCTATCATGTT+TGG - contig621end:10846-10865 MsG0080049032.01.T01:intron 30.0%
TGTTTGTAGCCTGTTAAATT+GGG + contig621end:15694-15713 None:intergenic 30.0%
TTAAGGAATGATGTTTCTTG+AGG - contig621end:13619-13638 MsG0080049032.01.T01:intron 30.0%
TTACAAACAACAACTTCATC+AGG - contig621end:16561-16580 MsG0080049032.01.T01:intron 30.0%
TTCAGCAAAACTTATGTCAA+TGG + contig621end:14632-14651 None:intergenic 30.0%
TTGAAAATATTGTAGCATCC+TGG - contig621end:11713-11732 MsG0080049032.01.T01:intron 30.0%
TTGTAGTTATGTGGATTCTA+GGG - contig621end:10748-10767 MsG0080049032.01.T01:intron 30.0%
TTGTTCTTTCCATTTCAACA+AGG + contig621end:18072-18091 None:intergenic 30.0%
! AAACAATATTTTCCGCTACA+AGG + contig621end:12549-12568 None:intergenic 30.0%
! AAGTGTTGCACATACATAAA+AGG + contig621end:19964-19983 None:intergenic 30.0%
! AAGTTCTATGTGATTTTTGC+TGG - contig621end:17654-17673 MsG0080049032.01.T01:intron 30.0%
! AATTTATCTGCCAGTTTTCT+AGG - contig621end:18861-18880 MsG0080049032.01.T01:intron 30.0%
! AGTTAGCAAACATGTCATTT+AGG + contig621end:18891-18910 None:intergenic 30.0%
! ATAAGTTGGAAATGCAATTG+TGG + contig621end:17716-17735 None:intergenic 30.0%
! ATATGTTGCTTGCTTATTAC+AGG - contig621end:18476-18495 MsG0080049032.01.T01:intron 30.0%
! ATCCTGGTAATGATGTAATT+GGG - contig621end:11729-11748 MsG0080049032.01.T01:intron 30.0%
! CACATAACTACAACTTTTCA+AGG + contig621end:10741-10760 None:intergenic 30.0%
! CATTCTTTATTGATGGATCA+AGG + contig621end:10036-10055 None:intergenic 30.0%
! CCCCTACATTTTATAAAAAC+AGG + contig621end:18335-18354 None:intergenic 30.0%
! GATCAATGATATAAAGGCAT+AGG - contig621end:14909-14928 MsG0080049032.01.T01:intron 30.0%
! GGTATAAATGTAAGGGTATA+GGG - contig621end:15243-15262 MsG0080049032.01.T01:intron 30.0%
! GTTAGCAAACATGTCATTTA+GGG + contig621end:18890-18909 None:intergenic 30.0%
! TATTTCATTTTGCTTAGCAG+TGG + contig621end:17180-17199 None:intergenic 30.0%
! TGGAAATGTTTTACACGAAA+TGG - contig621end:11652-11671 MsG0080049032.01.T01:intron 30.0%
! TTGTGAAAATTCTAGAGATC+GGG + contig621end:19535-19554 None:intergenic 30.0%
! TTGTTTGGCTTCATTATCTA+CGG + contig621end:10631-10650 None:intergenic 30.0%
!! ACGAACAAGAATTTGTTAGT+AGG + contig621end:15871-15890 None:intergenic 30.0%
!! AGTAGTCTGAATGTTTTGTT+TGG - contig621end:10830-10849 MsG0080049032.01.T01:intron 30.0%
!! ATAACATGCATTGTTTTGTC+TGG + contig621end:19898-19917 None:intergenic 30.0%
!! TTGTTTTTCCTTCTACAGTT+AGG - contig621end:10549-10568 MsG0080049032.01.T01:intron 30.0%
!!! AATGGTTGTATTAGTTTTCC+GGG - contig621end:15101-15120 MsG0080049032.01.T01:intron 30.0%
!!! AGTATATAAGTTGCTGCTTT+TGG - contig621end:11436-11455 MsG0080049032.01.T01:CDS 30.0%
!!! TCGAAATTGAATTTTGGAAC+CGG - contig621end:15077-15096 MsG0080049032.01.T01:intron 30.0%
!!! TTTTTTTAGGGTTAGGGTTA+GGG - contig621end:16595-16614 MsG0080049032.01.T01:intron 30.0%
!!! TTTTTTTTAGGGTTAGGGTT+AGG - contig621end:16594-16613 MsG0080049032.01.T01:intron 30.0%
AAAAGTAATACCATCAACCC+TGG - contig621end:19473-19492 MsG0080049032.01.T01:intron 35.0%
AAAATAAGCGGCAAAATGCT+TGG - contig621end:18990-19009 MsG0080049032.01.T01:intron 35.0%
AAACAGAACAAGTGTGTACA+TGG - contig621end:13387-13406 MsG0080049032.01.T01:intron 35.0%
AAACGCTTCAATAAACGTGA+TGG + contig621end:17916-17935 None:intergenic 35.0%
AACATAAGGCCAATTCAAGA+AGG - contig621end:18510-18529 MsG0080049032.01.T01:intron 35.0%
AACCAAGGGAAAAGCAAAAA+AGG - contig621end:19027-19046 MsG0080049032.01.T01:intron 35.0%
AACGCTTCAATAAACGTGAT+GGG + contig621end:17915-17934 None:intergenic 35.0%
AAGAGAAAACAGTGTTTAGG+TGG + contig621end:14955-14974 None:intergenic 35.0%
AAGCCTAAGGGTCTATATTT+GGG + contig621end:13248-13267 None:intergenic 35.0%
AATGTATGCAGATGTAATGC+AGG + contig621end:17539-17558 None:intergenic 35.0%
ACAATCTAATCCCGTATTTC+TGG + contig621end:14664-14683 None:intergenic 35.0%
ACGTACATACCAGTTTATTG+TGG + contig621end:17232-17251 None:intergenic 35.0%
AGAGGAATCACTTTATCCTA+GGG - contig621end:17967-17986 MsG0080049032.01.T01:intron 35.0%
AGCAAGATAGATAGAAGTGA+TGG + contig621end:16925-16944 None:intergenic 35.0%
AGCAGAGAAAAATCAACCTA+AGG - contig621end:10974-10993 MsG0080049032.01.T01:intron 35.0%
AGGACCTTGGTTAAGAAAAA+GGG - contig621end:14244-14263 MsG0080049032.01.T01:intron 35.0%
AGGCTGTTTATAGTGATGAT+GGG - contig621end:17384-17403 MsG0080049032.01.T01:intron 35.0%
AGTGTGAGCAAAAAGACAAT+CGG + contig621end:11991-12010 None:intergenic 35.0%
ATAATGCACGGAATAGGAAT+TGG - contig621end:14412-14431 MsG0080049032.01.T01:intron 35.0%
ATGTATGCAGATGTAATGCA+GGG + contig621end:17538-17557 None:intergenic 35.0%
ATGTATGTGCAACACTTACA+TGG - contig621end:19967-19986 MsG0080049032.01.T01:intron 35.0%
ATTATGTCAGCTATGACACT+TGG - contig621end:17450-17469 MsG0080049032.01.T01:intron 35.0%
CAAACAAAGCTTAAGCCTAA+GGG + contig621end:13260-13279 None:intergenic 35.0%
CAACAGGAAATTTGTGTTGA+TGG + contig621end:17352-17371 None:intergenic 35.0%
CAATCTAATCCCGTATTTCT+GGG + contig621end:14663-14682 None:intergenic 35.0%
CATCAACACAAATTTCCTGT+TGG - contig621end:17350-17369 MsG0080049032.01.T01:intron 35.0%
CCAAATATATCATGCACTCA+TGG + contig621end:17803-17822 None:intergenic 35.0%
CCATGAGTGCATGATATATT+TGG - contig621end:17800-17819 MsG0080049032.01.T01:intron 35.0%
CGTACATACCAGTTTATTGT+GGG + contig621end:17231-17250 None:intergenic 35.0%
CTATATTTGGCAGATTGTGA+TGG - contig621end:12037-12056 MsG0080049032.01.T01:intron 35.0%
CTGCTAATACAAAAGTTCTG+CGG - contig621end:10589-10608 MsG0080049032.01.T01:intron 35.0%
CTGTTTGTAGCCTGTTAAAT+TGG + contig621end:15695-15714 None:intergenic 35.0%
GAAAAAAAGGAATGAGCAAG+TGG - contig621end:13312-13331 MsG0080049032.01.T01:CDS 35.0%
GAAAGGATGAAACATGTTAC+AGG + contig621end:13864-13883 None:intergenic 35.0%
GAAATAGAGGAAAATGGAAG+GGG - contig621end:13337-13356 MsG0080049032.01.T01:CDS 35.0%
GAAGAATTGAAGAGTCAATC+AGG - contig621end:10708-10727 MsG0080049032.01.T01:intron 35.0%
GAATGACGACATGAAAATTG+AGG - contig621end:16138-16157 MsG0080049032.01.T01:intron 35.0%
GAATGTGGAAACCATTATTC+TGG - contig621end:11751-11770 MsG0080049032.01.T01:intron 35.0%
GCAAATGTATTTCTTGGTAG+TGG - contig621end:18812-18831 MsG0080049032.01.T01:intron 35.0%
GCAAGATAGATAGAAGTGAT+GGG + contig621end:16924-16943 None:intergenic 35.0%
GGGTCATAAATCATAATGCA+CGG - contig621end:14400-14419 MsG0080049032.01.T01:intron 35.0%
GGTTGTCAGCTTATCTAATT+TGG + contig621end:11970-11989 None:intergenic 35.0%
GTAAGTGGTTTCTATAACAC+AGG - contig621end:11825-11844 MsG0080049032.01.T01:intron 35.0%
GTACGACATAGATAATGCAA+TGG + contig621end:17579-17598 None:intergenic 35.0%
GTGGAAGAAATAGAGGAAAA+TGG - contig621end:13331-13350 MsG0080049032.01.T01:CDS 35.0%
GTTGTAGTTATGTGGATTCT+AGG - contig621end:10747-10766 MsG0080049032.01.T01:intron 35.0%
GTTTGTAGCCTGTTAAATTG+GGG + contig621end:15693-15712 None:intergenic 35.0%
TAAGCCTAAGGGTCTATATT+TGG + contig621end:13249-13268 None:intergenic 35.0%
TAATACAAAAGTTCTGCGGA+TGG - contig621end:10593-10612 MsG0080049032.01.T01:intron 35.0%
TAATTCTGAGTATGTCGACA+TGG - contig621end:16697-16716 MsG0080049032.01.T01:intron 35.0%
TAGAACAAGAGATCAAACCA+AGG + contig621end:18760-18779 None:intergenic 35.0%
TAGAGGAATCACTTTATCCT+AGG - contig621end:17966-17985 MsG0080049032.01.T01:intron 35.0%
TCAACAGTTCCTTCTTGAAT+TGG + contig621end:18522-18541 None:intergenic 35.0%
TCATAAACAAATAGTCACGG+CGG + contig621end:14272-14291 None:intergenic 35.0%
TCCTTAAATTCTACAACACC+AGG - contig621end:17127-17146 MsG0080049032.01.T01:intron 35.0%
TCGACATACTCAGAATTAGA+TGG + contig621end:16695-16714 None:intergenic 35.0%
TCTATCATGTTTGGATTGCT+TGG - contig621end:10855-10874 MsG0080049032.01.T01:intron 35.0%
TCTCTAACCTGAAAAGAGAA+GGG + contig621end:16656-16675 None:intergenic 35.0%
TCTTGTGTAAAAACAGGGTA+AGG - contig621end:10342-10361 MsG0080049032.01.T01:CDS 35.0%
TGAAATTCTGTCTGCAAACA+CGG + contig621end:11534-11553 None:intergenic 35.0%
TGTATGTATCTATCTCATGG+CGG + contig621end:16972-16991 None:intergenic 35.0%
TTATGTCAGCTATGACACTT+GGG - contig621end:17451-17470 MsG0080049032.01.T01:intron 35.0%
TTCATGCATGTTGAAAGTGA+AGG - contig621end:15145-15164 MsG0080049032.01.T01:intron 35.0%
TTCCCAATTACATCATTACC+AGG + contig621end:11734-11753 None:intergenic 35.0%
TTCTCTAACCTGAAAAGAGA+AGG + contig621end:16657-16676 None:intergenic 35.0%
TTGAACTGTTTAGGAGAAAC+TGG - contig621end:11329-11348 MsG0080049032.01.T01:intron 35.0%
TTGAAGTCACCCAAAATAAG+CGG - contig621end:18978-18997 MsG0080049032.01.T01:intron 35.0%
TTTAGGGAATCCTAGAAAAC+TGG + contig621end:18874-18893 None:intergenic 35.0%
TTTGTTTGAGTCACAACTTC+CGG - contig621end:12912-12931 MsG0080049032.01.T01:intron 35.0%
! AAACACACCCTAAAGGTTTT+TGG + contig621end:13045-13064 None:intergenic 35.0%
! AAATTAGTAATGGAGCTCTC+CGG + contig621end:12934-12953 None:intergenic 35.0%
! AAGCTTTGATAAACCTTCCA+AGG - contig621end:10887-10906 MsG0080049032.01.T01:intron 35.0%
! ACTTTTAACAGTGTTCCAGA+GGG - contig621end:13768-13787 MsG0080049032.01.T01:intron 35.0%
! ATCAGGGAATACCAACATTT+TGG - contig621end:12157-12176 MsG0080049032.01.T01:intron 35.0%
! ATGCCTTTAAGTCTAAGATG+CGG - contig621end:18945-18964 MsG0080049032.01.T01:intron 35.0%
! ATTGTCTTTTTGCTCACACT+TGG - contig621end:11991-12010 MsG0080049032.01.T01:intron 35.0%
! CAAACATTAGTTTCCTTGGA+AGG + contig621end:10903-10922 None:intergenic 35.0%
! CAGACAGAATTTCAGTTTTC+CGG - contig621end:11540-11559 MsG0080049032.01.T01:intron 35.0%
! CATCCTGGTAATGATGTAAT+TGG - contig621end:11728-11747 MsG0080049032.01.T01:intron 35.0%
! CTTTGTTGTGCATCATAGAA+AGG - contig621end:12605-12624 MsG0080049032.01.T01:CDS 35.0%
! CTTTTGTGATGTATTCACTG+TGG - contig621end:19623-19642 MsG0080049032.01.T01:intron 35.0%
! GGCATGTATTTTCTTACGTT+TGG + contig621end:18930-18949 None:intergenic 35.0%
! GGGTATAAATGTAAGGGTAT+AGG - contig621end:15242-15261 MsG0080049032.01.T01:intron 35.0%
! TACTTTTAACAGTGTTCCAG+AGG - contig621end:13767-13786 MsG0080049032.01.T01:intron 35.0%
! TTCATTTTGCAGCACTTCTA+TGG + contig621end:10655-10674 None:intergenic 35.0%
! TTGTAAGTTGGATAGGAATG+AGG - contig621end:19447-19466 MsG0080049032.01.T01:intron 35.0%
! TTTGATTCCCTTCTCTTTTC+AGG - contig621end:16646-16665 MsG0080049032.01.T01:intron 35.0%
! TTTTACTGCCAACATAACAG+TGG - contig621end:13537-13556 MsG0080049032.01.T01:intron 35.0%
! TTTTCGTTCGACTACTACAA+TGG + contig621end:15303-15322 None:intergenic 35.0%
! TTTTGACGAAAAGGGAAATG+GGG - contig621end:16278-16297 MsG0080049032.01.T01:intron 35.0%
!! AAAAACCTTTAGGGTGTGTT+TGG - contig621end:13044-13063 MsG0080049032.01.T01:intron 35.0%
!! AAGCATTTTGCCGCTTATTT+TGG + contig621end:18991-19010 None:intergenic 35.0%
!! ACCTGGTGTTGTAGAATTTA+AGG + contig621end:17131-17150 None:intergenic 35.0%
!! AGCATTTTGCCGCTTATTTT+GGG + contig621end:18990-19009 None:intergenic 35.0%
!! ATTTGTGTTGATGGTCAAAG+TGG + contig621end:17343-17362 None:intergenic 35.0%
!! CTTCAAGATTGGTTTCTTCT+CGG - contig621end:19651-19670 MsG0080049032.01.T01:intron 35.0%
!! GTAGCGAGTCTCATTTTTAA+TGG - contig621end:15580-15599 MsG0080049032.01.T01:intron 35.0%
!! GTTTTGACGAAAAGGGAAAT+GGG - contig621end:16277-16296 MsG0080049032.01.T01:intron 35.0%
!! TAGTTTCATCTTTTGGTTGC+TGG - contig621end:13903-13922 MsG0080049032.01.T01:intron 35.0%
!! TTCAAGATTGGTTTCTTCTC+GGG - contig621end:19652-19671 MsG0080049032.01.T01:intron 35.0%
!! TTGAATTGGCCTTATGTTAG+CGG + contig621end:18508-18527 None:intergenic 35.0%
!! TTTGTGTTGATGGTCAAAGT+GGG + contig621end:17342-17361 None:intergenic 35.0%
!!! AGCTTTGGTTTTGACGAAAA+GGG - contig621end:16270-16289 MsG0080049032.01.T01:intron 35.0%
!!! CATCTGTTGATTTTCAGTCA+CGG - contig621end:18613-18632 MsG0080049032.01.T01:intron 35.0%
!!! CCGAAATTGAATTTTGGAAC+TGG + contig621end:14732-14751 None:intergenic 35.0%
!!! CTGTGAGATTTTTGGTTACA+AGG - contig621end:11571-11590 MsG0080049032.01.T01:intron 35.0%
!!! GAGATTTTTGGTTACAAGGT+TGG - contig621end:11575-11594 MsG0080049032.01.T01:intron 35.0%
!!! TACCTTTTTTGCTTTTCCCT+TGG + contig621end:19032-19051 None:intergenic 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG + contig621end:10343-10362 None:intergenic 35.0%
!!! TTGAATTTTGGAACCGGAAA+TGG - contig621end:15083-15102 MsG0080049032.01.T01:intron 35.0%
AAATCTCCTGATGATCCTCA+AGG - contig621end:19697-19716 MsG0080049032.01.T01:intron 40.0%
AACACAGGTCATCTTGAGTT+TGG - contig621end:11840-11859 MsG0080049032.01.T01:intron 40.0%
AACCAGTGATGTTAAGACAG+AGG + contig621end:11193-11212 None:intergenic 40.0%
AACCAGTGATGTTAAGAGAG+AGG + contig621end:11048-11067 None:intergenic 40.0%
AAGAGAAAGAAGATGCAAGG+TGG - contig621end:16469-16488 MsG0080049032.01.T01:intron 40.0%
AAGCATGCTTCTGTTGTAAG+TGG - contig621end:11810-11829 MsG0080049032.01.T01:intron 40.0%
AAGCATTTCCATCTGAAGGA+TGG - contig621end:19775-19794 MsG0080049032.01.T01:intron 40.0%
AAGTAAGTAAACGTGCGTGA+GGG - contig621end:16383-16402 MsG0080049032.01.T01:intron 40.0%
ACAGCCTCTTGTGTAAAAAC+AGG - contig621end:10336-10355 MsG0080049032.01.T01:CDS 40.0%
ACATACCAGTTTATTGTGGG+TGG + contig621end:17228-17247 None:intergenic 40.0%
ACCTTGACACAAATTTGACG+TGG - contig621end:14589-14608 MsG0080049032.01.T01:intron 40.0%
ACTATAAACAGCCTGAACTC+TGG + contig621end:17378-17397 None:intergenic 40.0%
AGAAGGAACTGTTGATCCTT+TGG - contig621end:18527-18546 MsG0080049032.01.T01:intron 40.0%
ATAAATGCCAGAAACCGGAA+GGG + contig621end:14845-14864 None:intergenic 40.0%
ATGCTGCATAGATATCTTCC+AGG - contig621end:13654-13673 MsG0080049032.01.T01:intron 40.0%
ATGTACCACCCCAATTTAAC+AGG - contig621end:15682-15701 MsG0080049032.01.T01:intron 40.0%
CACTTGGGGTAATAAAGAAG+AGG - contig621end:17466-17485 MsG0080049032.01.T01:intron 40.0%
CAGCCTCTTGTGTAAAAACA+GGG - contig621end:10337-10356 MsG0080049032.01.T01:CDS 40.0%
CAGGAAAAACTTCCTTGTAG+CGG - contig621end:12534-12553 MsG0080049032.01.T01:intron 40.0%
CAGGACCTTGGTTAAGAAAA+AGG - contig621end:14243-14262 MsG0080049032.01.T01:intron 40.0%
CAGGCTGTTTATAGTGATGA+TGG - contig621end:17383-17402 MsG0080049032.01.T01:intron 40.0%
CATAAACAAATAGTCACGGC+GGG + contig621end:14271-14290 None:intergenic 40.0%
CATACCAGTTTATTGTGGGT+GGG + contig621end:17227-17246 None:intergenic 40.0%
CATAGTAGCACACAAAGTAC+AGG + contig621end:18023-18042 None:intergenic 40.0%
CATCCGCATCTTAGACTTAA+AGG + contig621end:18951-18970 None:intergenic 40.0%
CCATGTTAGAGAAACAGAGT+TGG - contig621end:17614-17633 MsG0080049032.01.T01:intron 40.0%
CCTAAACAGTTCAAGTGATC+AGG + contig621end:11323-11342 None:intergenic 40.0%
CCTGATCACTTGAACTGTTT+AGG - contig621end:11320-11339 MsG0080049032.01.T01:intron 40.0%
CGTACAATACACCAAATGGT+GGG - contig621end:10368-10387 MsG0080049032.01.T01:intron 40.0%
CTACAAAGCAGGCTATCAAA+CGG - contig621end:18574-18593 MsG0080049032.01.T01:intron 40.0%
CTGAGTTTGAATTCAGCCTT+GGG + contig621end:14226-14245 None:intergenic 40.0%
GAAAGACTCCACTGTTATGT+TGG + contig621end:13548-13567 None:intergenic 40.0%
GCAAACAAAGCTTAAGCCTA+AGG + contig621end:13261-13280 None:intergenic 40.0%
GCTACAAACAATGTAACCCT+AGG + contig621end:10124-10143 None:intergenic 40.0%
GGACTTGAGGTAGTTATTCT+AGG - contig621end:14887-14906 MsG0080049032.01.T01:intron 40.0%
GGGTGTAAATGTAAAAGGTG+TGG - contig621end:16298-16317 MsG0080049032.01.T01:intron 40.0%
GTTAGGATGGTCAAAAATGG+AGG + contig621end:19189-19208 None:intergenic 40.0%
GTTATGTTGGCAGTAAAAGC+AGG + contig621end:13535-13554 None:intergenic 40.0%
TAAGTAAGTAAACGTGCGTG+AGG - contig621end:16382-16401 MsG0080049032.01.T01:intron 40.0%
TAGAGTTGTTGTCATGTGAC+TGG - contig621end:10288-10307 MsG0080049032.01.T01:CDS 40.0%
TATATATCCCTTCCGGTTTC+TGG - contig621end:14835-14854 MsG0080049032.01.T01:intron 40.0%
TATATTTGGGAGGAGGGTTT+AGG + contig621end:13235-13254 None:intergenic 40.0%
TATCCGCGTTAAAACTCCTA+GGG + contig621end:14199-14218 None:intergenic 40.0%
TATCTATCTTGCTTCTGTGC+AGG - contig621end:16932-16951 MsG0080049032.01.T01:intron 40.0%
TATGTCAGCTATGACACTTG+GGG - contig621end:17452-17471 MsG0080049032.01.T01:intron 40.0%
TCACACTTGGAATGCTTACA+TGG - contig621end:12004-12023 MsG0080049032.01.T01:intron 40.0%
TCCACGTCAAATTTGTGTCA+AGG + contig621end:14593-14612 None:intergenic 40.0%
TGAATTCAAACTCAGGACCT+TGG - contig621end:14231-14250 MsG0080049032.01.T01:intron 40.0%
TGAGCAAGTGGAAGAAATAG+AGG - contig621end:13324-13343 MsG0080049032.01.T01:CDS 40.0%
TGCTAAGTCACAAAAAGGGA+GGG - contig621end:15443-15462 MsG0080049032.01.T01:intron 40.0%
TGTGTTTGGACGGATAGTAT+AGG - contig621end:13058-13077 MsG0080049032.01.T01:intron 40.0%
TGTTCTGTACTCCTTAGAGA+GGG - contig621end:18299-18318 MsG0080049032.01.T01:intron 40.0%
TTCCGGGAAACATATACGTA+GGG - contig621end:15117-15136 MsG0080049032.01.T01:intron 40.0%
TTCCTTCTACAGTTAGGTCA+TGG - contig621end:10555-10574 MsG0080049032.01.T01:intron 40.0%
TTCTAGCCTGAATTTACCAC+AGG - contig621end:19282-19301 MsG0080049032.01.T01:intron 40.0%
TTCTCTCCTGTGGTAAATTC+AGG + contig621end:19291-19310 None:intergenic 40.0%
TTGATGCAATCCTAGTCCTA+TGG - contig621end:17510-17529 MsG0080049032.01.T01:intron 40.0%
TTGCTAAGTCACAAAAAGGG+AGG - contig621end:15442-15461 MsG0080049032.01.T01:intron 40.0%
TTTAGGAGAAACTGGAAAGC+TGG - contig621end:11337-11356 MsG0080049032.01.T01:intron 40.0%
TTTCCGGGAAACATATACGT+AGG - contig621end:15116-15135 MsG0080049032.01.T01:intron 40.0%
TTTGCAGCACCTTGTTGAAA+TGG - contig621end:18060-18079 MsG0080049032.01.T01:intron 40.0%
TTTGGACGGATAGTATAGGA+GGG - contig621end:13062-13081 MsG0080049032.01.T01:intron 40.0%
! AACAACTTTTCCAGGGTTGA+TGG + contig621end:19486-19505 None:intergenic 40.0%
! ACAGAATTTCAGTTTTCCGG+AGG - contig621end:11543-11562 MsG0080049032.01.T01:intron 40.0%
! ACTAATCTCTCGAGCCTTAT+GGG - contig621end:14137-14156 MsG0080049032.01.T01:intron 40.0%
! AGGGGAGGACTTTGAAAAAA+AGG - contig621end:13299-13318 MsG0080049032.01.T01:intron 40.0%
! CAACTTACAACCGATTCAAG+GGG + contig621end:19437-19456 None:intergenic 40.0%
! CAGAATTTCAGTTTTCCGGA+GGG - contig621end:11544-11563 MsG0080049032.01.T01:intron 40.0%
! CCAACTCTGTTTCTCTAACA+TGG + contig621end:17617-17636 None:intergenic 40.0%
! CCAACTTACAACCGATTCAA+GGG + contig621end:19438-19457 None:intergenic 40.0%
! CTTTAAGTCTAAGATGCGGA+TGG - contig621end:18949-18968 MsG0080049032.01.T01:intron 40.0%
! GAATCGGTTGTAAGTTGGAT+AGG - contig621end:19440-19459 MsG0080049032.01.T01:intron 40.0%
! GGCTGTTTATAGTGATGATG+GGG - contig621end:17385-17404 MsG0080049032.01.T01:intron 40.0%
! GGGTGAGGGTATAAATGTAA+GGG - contig621end:15236-15255 MsG0080049032.01.T01:intron 40.0%
! GTACTTTTAGTCCCTCTCTA+AGG + contig621end:18313-18332 None:intergenic 40.0%
! TAAGTTGGATAGGAATGAGG+AGG - contig621end:19450-19469 MsG0080049032.01.T01:intron 40.0%
! TCCAACTTACAACCGATTCA+AGG + contig621end:19439-19458 None:intergenic 40.0%
! TGTTTTCATAGGAACCCTCT+TGG + contig621end:10941-10960 None:intergenic 40.0%
!! AGAGAAGCATTTCCATCTGA+AGG - contig621end:19771-19790 MsG0080049032.01.T01:intron 40.0%
!! CAGCACTTCTATGGTTTGTT+TGG + contig621end:10646-10665 None:intergenic 40.0%
!! CATTGACTCGTATGTTAGGA+TGG + contig621end:19202-19221 None:intergenic 40.0%
!! CTGACATTGACTCGTATGTT+AGG + contig621end:19206-19225 None:intergenic 40.0%
!! CTGTGGTTTTGCTTCAAGAT+TGG - contig621end:19640-19659 MsG0080049032.01.T01:intron 40.0%
!! GGTTTTGACGAAAAGGGAAA+TGG - contig621end:16276-16295 MsG0080049032.01.T01:intron 40.0%
!! TCATCTTTTGGTTGCTGGTT+AGG - contig621end:13908-13927 MsG0080049032.01.T01:intron 40.0%
!! TGAATTGGCCTTATGTTAGC+GGG + contig621end:18507-18526 None:intergenic 40.0%
!! TTTATAGTGATGATGGGGAG+TGG - contig621end:17390-17409 MsG0080049032.01.T01:intron 40.0%
!! TTTTCAAGCCCACAACTATC+AGG + contig621end:13735-13754 None:intergenic 40.0%
!!! GAGCTTTGGTTTTGACGAAA+AGG - contig621end:16269-16288 MsG0080049032.01.T01:intron 40.0%
AAAAAAGGCAAAGGGCAACC+CGG + contig621end:10434-10453 None:intergenic 45.0%
AAACCAGAAACTGGACAGCT+TGG + contig621end:10503-10522 None:intergenic 45.0%
AACACCCACCCACAATAAAC+TGG - contig621end:17220-17239 MsG0080049032.01.T01:intron 45.0%
AACCAGAAACTGGACAGCTT+GGG + contig621end:10502-10521 None:intergenic 45.0%
AAGAAGATGCAAGGTGGTAG+CGG - contig621end:16475-16494 MsG0080049032.01.T01:intron 45.0%
AAGGGTCTATATTTGGGAGG+AGG + contig621end:13242-13261 None:intergenic 45.0%
AAGTTCAAAACTCCACCCTC+TGG + contig621end:13786-13805 None:intergenic 45.0%
ACAAGTGTTTAGTAGGGGTG+AGG - contig621end:15221-15240 MsG0080049032.01.T01:intron 45.0%
ACCCCTACGTATATGTTTCC+CGG + contig621end:15122-15141 None:intergenic 45.0%
ACCTTTCCTTGAGGATCATC+AGG + contig621end:19706-19725 None:intergenic 45.0%
ACTTGTGATTGTGCATTCCC+AGG - contig621end:13477-13496 MsG0080049032.01.T01:intron 45.0%
AGCAGTGGCAAGAAGTTCTT+CGG + contig621end:17165-17184 None:intergenic 45.0%
AGGACTAGGATTGCATCAAG+TGG + contig621end:17509-17528 None:intergenic 45.0%
AGGGTCTATATTTGGGAGGA+GGG + contig621end:13241-13260 None:intergenic 45.0%
AGGTAGATCCCGCTAACATA+AGG - contig621end:18496-18515 MsG0080049032.01.T01:intron 45.0%
AGTAAGTAAACGTGCGTGAG+GGG - contig621end:16384-16403 MsG0080049032.01.T01:intron 45.0%
AGTCTAGCCTCCATAGTAAG+GGG + contig621end:15470-15489 None:intergenic 45.0%
AGTTGCTGAAGCTACAAAGC+AGG - contig621end:18563-18582 MsG0080049032.01.T01:intron 45.0%
AGTTTATTGTGGGTGGGTGT+TGG + contig621end:17221-17240 None:intergenic 45.0%
ATAGAGGAAAATGGAAGGGG+AGG - contig621end:13340-13359 MsG0080049032.01.T01:CDS 45.0%
ATTATCTGCAAGCCTGCAAG+CGG + contig621end:12252-12271 None:intergenic 45.0%
CAAACAGCCTCTACAGTGAT+TGG + contig621end:19872-19891 None:intergenic 45.0%
CAAACGGAAAATTGCGCAAG+CGG - contig621end:18590-18609 MsG0080049032.01.T01:intron 45.0%
CAAGTGTTTAGTAGGGGTGA+GGG - contig621end:15222-15241 MsG0080049032.01.T01:intron 45.0%
CAGTTCAAGTGATCAGGCAA+CGG + contig621end:11317-11336 None:intergenic 45.0%
CATAAATGCCAGAAACCGGA+AGG + contig621end:14846-14865 None:intergenic 45.0%
CATACAATCGAAGGGCTAAC+TGG + contig621end:19832-19851 None:intergenic 45.0%
CATTCTGTTGATGCTGAGTG+AGG + contig621end:18133-18152 None:intergenic 45.0%
CCAAGGCTGAATTCAAACTC+AGG - contig621end:14224-14243 MsG0080049032.01.T01:intron 45.0%
CCCTTGAATCGGTTGTAAGT+TGG - contig621end:19435-19454 MsG0080049032.01.T01:intron 45.0%
CCGAACGAATATCTCAACCT+GGG + contig621end:13497-13516 None:intergenic 45.0%
CCTAAGGGTCTATATTTGGG+AGG + contig621end:13245-13264 None:intergenic 45.0%
CCTCCCAAATATAGACCCTT+AGG - contig621end:13242-13261 MsG0080049032.01.T01:intron 45.0%
CCTGAGTTTGAATTCAGCCT+TGG + contig621end:14227-14246 None:intergenic 45.0%
CGATTGTACCATCCTTCAGA+TGG + contig621end:19786-19805 None:intergenic 45.0%
CTGGAATTCCATTTGATCGC+TGG + contig621end:12070-12089 None:intergenic 45.0%
GACCTCTCTCTTAACATCAC+TGG - contig621end:11043-11062 MsG0080049032.01.T01:CDS 45.0%
GACCTCTGTCTTAACATCAC+TGG - contig621end:11188-11207 MsG0080049032.01.T01:intron 45.0%
GACTAATCTCTCGAGCCTTA+TGG - contig621end:14136-14155 MsG0080049032.01.T01:intron 45.0%
GAGTCTAGCCTCCATAGTAA+GGG + contig621end:15471-15490 None:intergenic 45.0%
GATGAACACCAGCGATCAAA+TGG - contig621end:12059-12078 MsG0080049032.01.T01:intron 45.0%
GATGATCCTCAAGGAAAGGT+TGG - contig621end:19706-19725 MsG0080049032.01.T01:intron 45.0%
GATGGTCAAAGTGGGTATGA+AGG + contig621end:17334-17353 None:intergenic 45.0%
GCAATGATACTTCTCTCCTG+TGG + contig621end:19301-19320 None:intergenic 45.0%
GCGTACAATACACCAAATGG+TGG - contig621end:10367-10386 MsG0080049032.01.T01:intron 45.0%
GCTCAAACCAATCACTGTAG+AGG - contig621end:19862-19881 MsG0080049032.01.T01:intron 45.0%
GCTGCGTACAATACACCAAA+TGG - contig621end:10364-10383 MsG0080049032.01.T01:CDS 45.0%
GGAAATGCTTCTCTCTTCTC+TGG + contig621end:19765-19784 None:intergenic 45.0%
GGAATCACTTTATCCTAGGG+AGG - contig621end:17970-17989 MsG0080049032.01.T01:intron 45.0%
GTATCCGCGTTAAAACTCCT+AGG + contig621end:14200-14219 None:intergenic 45.0%
GTCTATATGAGGGGTAACCT+TGG - contig621end:10256-10275 MsG0080049032.01.T01:CDS 45.0%
GTGTTCTGTACTCCTTAGAG+AGG - contig621end:18298-18317 MsG0080049032.01.T01:intron 45.0%
GTTGTTGTCATGTGACTGGA+AGG - contig621end:10292-10311 MsG0080049032.01.T01:CDS 45.0%
GTTTGGACGGATAGTATAGG+AGG - contig621end:13061-13080 MsG0080049032.01.T01:intron 45.0%
TAAAAAATGTGGGCGCGTTG+TGG - contig621end:16116-16135 MsG0080049032.01.T01:intron 45.0%
TAGAGGAAAATGGAAGGGGA+GGG - contig621end:13341-13360 MsG0080049032.01.T01:CDS 45.0%
TAGCTGACTAACAAGTTGCC+TGG + contig621end:13675-13694 None:intergenic 45.0%
TCATTACACATCTCAGCCTG+AGG - contig621end:12364-12383 MsG0080049032.01.T01:intron 45.0%
TCCGAACGAATATCTCAACC+TGG + contig621end:13498-13517 None:intergenic 45.0%
TCCGGGAAACATATACGTAG+GGG - contig621end:15118-15137 MsG0080049032.01.T01:intron 45.0%
TCCTGATGATCCTCAAGGAA+AGG - contig621end:19702-19721 MsG0080049032.01.T01:intron 45.0%
TGTAGCCTGTTAAATTGGGG+TGG + contig621end:15690-15709 None:intergenic 45.0%
TTGCAGGCTTGCAGATAATC+AGG - contig621end:12253-12272 MsG0080049032.01.T01:intron 45.0%
TTGGACGGATAGTATAGGAG+GGG - contig621end:13063-13082 MsG0080049032.01.T01:intron 45.0%
TTGTATGTGTTAAGGCCTCG+AGG - contig621end:11234-11253 MsG0080049032.01.T01:intron 45.0%
TTTAACAGTGTTCCAGAGGG+TGG - contig621end:13771-13790 MsG0080049032.01.T01:intron 45.0%
TTTGCGAGTCTGAAGGTGAA+GGG - contig621end:13276-13295 MsG0080049032.01.T01:intron 45.0%
! ATACAGGAGGTATGCCAAGA+GGG - contig621end:10924-10943 MsG0080049032.01.T01:intron 45.0%
! CCCAGGTTGAGATATTCGTT+CGG - contig621end:13494-13513 MsG0080049032.01.T01:intron 45.0%
! CTTTTGCAGCATTCTCGCAT+CGG - contig621end:13707-13726 MsG0080049032.01.T01:intron 45.0%
! GGGGTGAGGGTATAAATGTA+AGG - contig621end:15235-15254 MsG0080049032.01.T01:intron 45.0%
! GGGTCCCTTTTTCTTAACCA+AGG + contig621end:14251-14270 None:intergenic 45.0%
! GTAAAAGGTGTGGTGCAGAA+AGG - contig621end:16308-16327 MsG0080049032.01.T01:intron 45.0%
! TATACAGGAGGTATGCCAAG+AGG - contig621end:10923-10942 MsG0080049032.01.T01:intron 45.0%
! TTACACAAGAGGCTGTTTCC+AGG + contig621end:10332-10351 None:intergenic 45.0%
!! ACCTTTAGGGTGTGTTTGGA+CGG - contig621end:13048-13067 MsG0080049032.01.T01:intron 45.0%
!! AGATTGGTTTCTTCTCGGGA+AGG - contig621end:19656-19675 MsG0080049032.01.T01:intron 45.0%
!! AGCTTTGTTTGCGAGTCTGA+AGG - contig621end:13269-13288 MsG0080049032.01.T01:intron 45.0%
!! ATTTGGTGTGTAAGCCTCGA+CGG + contig621end:17426-17445 None:intergenic 45.0%
!! GGATCAAGGAAAAGCATCTG+AGG + contig621end:10022-10041 None:intergenic 45.0%
!! TCTCCCTAGGAGTTTTAACG+CGG - contig621end:14193-14212 MsG0080049032.01.T01:intron 45.0%
!! TTGCTTTTCCCTTGGTTGTC+TGG + contig621end:19024-19043 None:intergenic 45.0%
!! AAAAAAAAAAAAATTAGTAA+TGG + contig621end:12944-12963 None:intergenic 5.0%
!! TTATATTATATTATGTTTAA+GGG - contig621end:12194-12213 MsG0080049032.01.T01:intron 5.0%
!! TTTATATTATATTATGTTTA+AGG - contig621end:12193-12212 MsG0080049032.01.T01:intron 5.0%
!!! ATCTTTATTTATTAAAATAA+AGG + contig621end:15646-15665 None:intergenic 5.0%
!!! TCTTTATTTATTAAAATAAA+GGG + contig621end:15645-15664 None:intergenic 5.0%
!!! TTAATATTTTGTATTAATTA+TGG - contig621end:12734-12753 MsG0080049032.01.T01:intron 5.0%
AAAATGGAAGGGGAGGGCTT+TGG - contig621end:13347-13366 MsG0080049032.01.T01:CDS 50.0%
AAATGGAAGGGGAGGGCTTT+GGG - contig621end:13348-13367 MsG0080049032.01.T01:CDS 50.0%
ACACAACTCACCACATCCTC+AGG + contig621end:18675-18694 None:intergenic 50.0%
ACTCGCTCAGCTTCAACCAA+AGG + contig621end:18546-18565 None:intergenic 50.0%
ACTTGGAAGTAAGCCTCCCT+AGG + contig621end:17986-18005 None:intergenic 50.0%
AGAAGATGCAAGGTGGTAGC+GGG - contig621end:16476-16495 MsG0080049032.01.T01:intron 50.0%
AGGAGAAACTGGAAAGCTGG+TGG - contig621end:11340-11359 MsG0080049032.01.T01:intron 50.0%
ATGTGTTAAGGCCTCGAGGA+CGG - contig621end:11238-11257 MsG0080049032.01.T01:intron 50.0%
CACAACTCACCACATCCTCA+GGG + contig621end:18674-18693 None:intergenic 50.0%
CACTAGAGAAGCGAGAAGAG+AGG - contig621end:11411-11430 MsG0080049032.01.T01:CDS 50.0%
CAGCAGTTCCAGACAACCAA+GGG - contig621end:19013-19032 MsG0080049032.01.T01:intron 50.0%
CGCCATGACCTAACTGTAGA+AGG + contig621end:10560-10579 None:intergenic 50.0%
CTTACCTGACGAGATACCTC+AGG + contig621end:12383-12402 None:intergenic 50.0%
CTTCGGTCAAAGCAATGACC+TGG + contig621end:17148-17167 None:intergenic 50.0%
GAGAGTTTGCCGTCCATTTG+GGG + contig621end:14177-14196 None:intergenic 50.0%
GATGTAATGCAGGGCTCCAT+AGG + contig621end:17529-17548 None:intergenic 50.0%
GCTGGTGGAGAGCTACATAT+CGG - contig621end:11355-11374 MsG0080049032.01.T01:intron 50.0%
GGAGAGTTTGCCGTCCATTT+GGG + contig621end:14178-14197 None:intergenic 50.0%
GGAGTCTAGCCTCCATAGTA+AGG + contig621end:15472-15491 None:intergenic 50.0%
GGCTCTATACGAAGCTTTGC+AGG + contig621end:18645-18664 None:intergenic 50.0%
GTCACACCAACCTTTCCTTG+AGG + contig621end:19715-19734 None:intergenic 50.0%
GTCATGTGACTGGAAGGTCA+CGG - contig621end:10298-10317 MsG0080049032.01.T01:CDS 50.0%
GTCGAGGCTTACACACCAAA+TGG - contig621end:17425-17444 MsG0080049032.01.T01:intron 50.0%
GTTGGAGATTGGGTGGAAGT+GGG + contig621end:17203-17222 None:intergenic 50.0%
GTTTGCGAGTCTGAAGGTGA+AGG - contig621end:13275-13294 MsG0080049032.01.T01:intron 50.0%
TATTCAGCTTTCCGTCCTCG+AGG + contig621end:11252-11271 None:intergenic 50.0%
TCATGTGACTGGAAGGTCAC+GGG - contig621end:10299-10318 MsG0080049032.01.T01:CDS 50.0%
TCCGTCCAAACACACCCTAA+AGG + contig621end:13052-13071 None:intergenic 50.0%
TGCACTCATGGCTCATGTCA+TGG + contig621end:17791-17810 None:intergenic 50.0%
TGCAGCGTAAATCGTGTCAC+TGG + contig621end:12089-12108 None:intergenic 50.0%
TGTTGGAGATTGGGTGGAAG+TGG + contig621end:17204-17223 None:intergenic 50.0%
TTAACGCGGATACATGCCCA+AGG - contig621end:14207-14226 MsG0080049032.01.T01:intron 50.0%
TTATCTGCAAGCCTGCAAGC+GGG + contig621end:12251-12270 None:intergenic 50.0%
TTCGTAGGACCCCAAATGGA+CGG - contig621end:14165-14184 MsG0080049032.01.T01:intron 50.0%
TTTGTGCGCATGAGAGCGAA+GGG - contig621end:12501-12520 MsG0080049032.01.T01:intron 50.0%
! AGGGCGTGCTGTGAGATTTT+TGG - contig621end:11563-11582 MsG0080049032.01.T01:intron 50.0%
! CATCGGTGCCTGATAGTTGT+GGG - contig621end:13724-13743 MsG0080049032.01.T01:intron 50.0%
! CTGAGGTATCTCGTCAGGTA+AGG - contig621end:12381-12400 MsG0080049032.01.T01:intron 50.0%
! TTTTGTGCGCATGAGAGCGA+AGG - contig621end:12500-12519 MsG0080049032.01.T01:intron 50.0%
!! AAGGTTGGTGTGACTGGAAG+TGG - contig621end:19721-19740 MsG0080049032.01.T01:intron 50.0%
!! AGGTTGGTGTGACTGGAAGT+GGG - contig621end:19722-19741 MsG0080049032.01.T01:intron 50.0%
!! CAAGGAAAGGTTGGTGTGAC+TGG - contig621end:19715-19734 MsG0080049032.01.T01:intron 50.0%
!! TCTATCTCATGGCGGACATC+AGG + contig621end:16964-16983 None:intergenic 50.0%
AAATCTCACAGCACGCCCTC+CGG + contig621end:11562-11581 None:intergenic 55.0%
AAGGGAGGGTCCCCTTACTA+TGG - contig621end:15457-15476 MsG0080049032.01.T01:intron 55.0%
AATGGAAGGGGAGGGCTTTG+GGG - contig621end:13349-13368 MsG0080049032.01.T01:intron 55.0%
ACCACATCCTCAGGGTCATC+GGG + contig621end:18666-18685 None:intergenic 55.0%
ACTAAAGCTCCCGCATACGC+AGG + contig621end:10408-10427 None:intergenic 55.0%
AGGTGTGGTGCAGAAAGGAG+TGG - contig621end:16313-16332 MsG0080049032.01.T01:intron 55.0%
ATGCAGGGCTCCATAGGACT+AGG + contig621end:17523-17542 None:intergenic 55.0%
ATGGACGGCAAACTCTCCCT+AGG - contig621end:14180-14199 MsG0080049032.01.T01:intron 55.0%
CAACTCTACCAGTTGCGCCA+AGG + contig621end:10276-10295 None:intergenic 55.0%
CACCACATCCTCAGGGTCAT+CGG + contig621end:18667-18686 None:intergenic 55.0%
CACCCAAGCTGTCCAGTTTC+TGG - contig621end:10497-10516 MsG0080049032.01.T01:intron 55.0%
CATGGAAAGAGAGCTCTCCG+AGG - contig621end:16715-16734 MsG0080049032.01.T01:intron 55.0%
CGAGTCTGAAGGTGAAGGGA+GGG - contig621end:13280-13299 MsG0080049032.01.T01:intron 55.0%
CTAAAGCTCCCGCATACGCA+GGG + contig621end:10407-10426 None:intergenic 55.0%
GACGGATAGTATAGGAGGGG+AGG - contig621end:13066-13085 MsG0080049032.01.T01:intron 55.0%
GAGTCTGAAGGTGAAGGGAG+GGG - contig621end:13281-13300 MsG0080049032.01.T01:intron 55.0%
GCAGCAGTTCCAGACAACCA+AGG - contig621end:19012-19031 MsG0080049032.01.T01:intron 55.0%
GGGAGAGTTTGCCGTCCATT+TGG + contig621end:14179-14198 None:intergenic 55.0%
GGTGTGACTGGAAGTGGGAA+AGG - contig621end:19727-19746 MsG0080049032.01.T01:intron 55.0%
GTGGTATGATGCAACCGTCG+AGG - contig621end:17409-17428 MsG0080049032.01.T01:intron 55.0%
TATAGAGCCCGATGACCCTG+AGG - contig621end:18656-18675 MsG0080049032.01.T01:intron 55.0%
TCCTACGAAGCGGTCCCATA+AGG + contig621end:14154-14173 None:intergenic 55.0%
TCCTGTTGGCACCAGAGTTC+AGG - contig621end:17364-17383 MsG0080049032.01.T01:intron 55.0%
TTGTGCGCATGAGAGCGAAG+GGG - contig621end:12502-12521 MsG0080049032.01.T01:intron 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG - contig621end:10412-10431 MsG0080049032.01.T01:intron 55.0%
! CCATTTGGGGTCCTACGAAG+CGG + contig621end:14164-14183 None:intergenic 55.0%
! CTCTCAAGTTGCGCAAGCGT+AGG + contig621end:14117-14136 None:intergenic 55.0%
! GCATCGGTGCCTGATAGTTG+TGG - contig621end:13723-13742 MsG0080049032.01.T01:intron 55.0%
! TCAGCCTGAGGTATCTCGTC+AGG - contig621end:12376-12395 MsG0080049032.01.T01:intron 55.0%
!! GTGGGTGGGTGTTGGAGATT+GGG + contig621end:17213-17232 None:intergenic 55.0%
!! TGTGGGTGGGTGTTGGAGAT+TGG + contig621end:17214-17233 None:intergenic 55.0%
AAGGTCACGGGTTCGAGTCC+TGG - contig621end:10311-10330 MsG0080049032.01.T01:CDS 60.0%
AGGGACTAACACCCGCTTGC+AGG - contig621end:12237-12256 MsG0080049032.01.T01:intron 60.0%
AGGGGTAACCTTGGCGCAAC+TGG - contig621end:10265-10284 MsG0080049032.01.T01:CDS 60.0%
CCGCTTCGTAGGACCCCAAA+TGG - contig621end:14161-14180 MsG0080049032.01.T01:intron 60.0%
GCCTTATGGGACCGCTTCGT+AGG - contig621end:14150-14169 MsG0080049032.01.T01:intron 60.0%
GCGAGTCTGAAGGTGAAGGG+AGG - contig621end:13279-13298 MsG0080049032.01.T01:intron 60.0%
GGAGGGTCCCCTTACTATGG+AGG - contig621end:15460-15479 MsG0080049032.01.T01:intron 60.0%
TCTGAAGGTGAAGGGAGGGG+AGG - contig621end:13284-13303 MsG0080049032.01.T01:intron 60.0%
TGTGCGCATGAGAGCGAAGG+GGG - contig621end:12503-12522 MsG0080049032.01.T01:intron 60.0%
! ATGGAAGGGGAGGGCTTTGG+GGG - contig621end:13350-13369 MsG0080049032.01.T01:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - contig621end:10380-10399 MsG0080049032.01.T01:intron 60.0%
! GCCTGAACTCTGGTGCCAAC+AGG + contig621end:17368-17387 None:intergenic 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG - contig621end:10413-10432 MsG0080049032.01.T01:intron 60.0%
!! CTCATGGCGGACATCAGGAC+AGG + contig621end:16959-16978 None:intergenic 60.0%
!! GGTGGGTGTTGGAGATTGGG+TGG + contig621end:17210-17229 None:intergenic 60.0%
AGCGAAGGGGGGAGCTTAGC+AGG - contig621end:12515-12534 MsG0080049032.01.T01:intron 65.0%
CATACGCAGGGTCCGGGAAG+GGG + contig621end:10395-10414 None:intergenic 65.0%
CGGGAAGGGGTCCCACCATT+TGG + contig621end:10382-10401 None:intergenic 65.0%
CTTCCCGGACCCTGCGTATG+CGG - contig621end:10395-10414 MsG0080049032.01.T01:intron 65.0%
GCATACGCAGGGTCCGGGAA+GGG + contig621end:10396-10415 None:intergenic 65.0%
GCCCGATGACCCTGAGGATG+TGG - contig621end:18662-18681 MsG0080049032.01.T01:intron 65.0%
GTGCGCATGAGAGCGAAGGG+GGG - contig621end:12504-12523 MsG0080049032.01.T01:intron 65.0%
TTCCCGGACCCTGCGTATGC+GGG - contig621end:10396-10415 MsG0080049032.01.T01:intron 65.0%
CGCATACGCAGGGTCCGGGA+AGG + contig621end:10397-10416 None:intergenic 70.0%
CTCCCGCATACGCAGGGTCC+GGG + contig621end:10401-10420 None:intergenic 70.0%
GCTCCCGCATACGCAGGGTC+CGG + contig621end:10402-10421 None:intergenic 70.0%
!! GCAAGGTGGTAGCGGGCGTG+AGG - contig621end:16483-16502 MsG0080049032.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
contig621end gene 10001 20041 10001 ID=MsG0080049032.01;
contig621end mRNA 10001 20041 10001 ID=MsG0080049032.01.T01;Parent=MsG0080049032.01
contig621end exon 10001 10384 10001 ID=MsG0080049032.01.T01.exon;Parent=MsG0080049032.01.T01
contig621end CDS 10223 10384 10223 ID=MsG0080049032.01.T01.cds;Parent=MsG0080049032.01.T01
contig621end CDS 10994 11122 10994 ID=MsG0080049032.01.T01.cds;Parent=MsG0080049032.01.T01
contig621end exon 10994 11122 10994 ID=MsG0080049032.01.T01.exon;Parent=MsG0080049032.01.T01
contig621end CDS 11359 11544 11359 ID=MsG0080049032.01.T01.cds;Parent=MsG0080049032.01.T01
contig621end exon 11359 11544 11359 ID=MsG0080049032.01.T01.exon;Parent=MsG0080049032.01.T01
contig621end CDS 12555 12713 12555 ID=MsG0080049032.01.T01.cds;Parent=MsG0080049032.01.T01
contig621end exon 12555 12713 12555 ID=MsG0080049032.01.T01.exon;Parent=MsG0080049032.01.T01
contig621end CDS 13306 13367 13306 ID=MsG0080049032.01.T01.cds;Parent=MsG0080049032.01.T01
contig621end exon 13306 13367 13306 ID=MsG0080049032.01.T01.exon;Parent=MsG0080049032.01.T01
contig621end CDS 13507 13527 13507 ID=MsG0080049032.01.T01.cds;Parent=MsG0080049032.01.T01
contig621end exon 13507 13527 13507 ID=MsG0080049032.01.T01.exon;Parent=MsG0080049032.01.T01
contig621end CDS 14298 14360 14298 ID=MsG0080049032.01.T01.cds;Parent=MsG0080049032.01.T01
contig621end exon 14298 14360 14298 ID=MsG0080049032.01.T01.exon;Parent=MsG0080049032.01.T01
contig621end CDS 14799 14809 14799 ID=MsG0080049032.01.T01.cds;Parent=MsG0080049032.01.T01
contig621end exon 14799 14809 14799 ID=MsG0080049032.01.T01.exon;Parent=MsG0080049032.01.T01
contig621end CDS 15038 15058 15038 ID=MsG0080049032.01.T01.cds;Parent=MsG0080049032.01.T01
contig621end exon 15038 15058 15038 ID=MsG0080049032.01.T01.exon;Parent=MsG0080049032.01.T01
contig621end CDS 15790 15813 15790 ID=MsG0080049032.01.T01.cds;Parent=MsG0080049032.01.T01
contig621end exon 15790 15813 15790 ID=MsG0080049032.01.T01.exon;Parent=MsG0080049032.01.T01
contig621end CDS 16532 16543 16532 ID=MsG0080049032.01.T01.cds;Parent=MsG0080049032.01.T01
contig621end exon 16532 16543 16532 ID=MsG0080049032.01.T01.exon;Parent=MsG0080049032.01.T01
contig621end CDS 17330 17351 17330 ID=MsG0080049032.01.T01.cds;Parent=MsG0080049032.01.T01
contig621end exon 17330 17351 17330 ID=MsG0080049032.01.T01.exon;Parent=MsG0080049032.01.T01
contig621end CDS 18211 18229 18211 ID=MsG0080049032.01.T01.cds;Parent=MsG0080049032.01.T01
contig621end exon 18211 18229 18211 ID=MsG0080049032.01.T01.exon;Parent=MsG0080049032.01.T01
contig621end CDS 19110 19152 19110 ID=MsG0080049032.01.T01.cds;Parent=MsG0080049032.01.T01
contig621end exon 19110 19152 19110 ID=MsG0080049032.01.T01.exon;Parent=MsG0080049032.01.T01
contig621end CDS 19985 19989 19985 ID=MsG0080049032.01.T01.cds;Parent=MsG0080049032.01.T01
contig621end exon 19985 20041 19985 ID=MsG0080049032.01.T01.exon;Parent=MsG0080049032.01.T01
Gene Sequence

>MsG0080049032.01.T01

ATGATCTTTGATAAACCTTCCAAGGAAACTAATGTTTGTATACAGGAGCATGCTTCTGTTGTAAGTGAATATAATTCATCAATACAATTGTTGAGATATTCGCTGAATTCAAACTCAGGACCTTGCAATGCAGAGTTCACAAATTATAGGGGTGAGGATGTACCACCCCAATTTAACAGGCTACAAACAGTTTATATTGTCTCTTTTTATATTGCGATCTAAGAAGAAGAATTAAATATAAAACTTCTGAATGATGAACCATCTAATTCTGAGTATGTCGACATGGAAAGAGAGCTCTCCGAGGACCTTCATACCCACTTTGACCATCAACACAAATTTCCTGTTGGCACCAGAGTTCAGGCTGTTTATAGTGATGATGGGGAGTGGTATGATGCAACCGTCGAGGCTTACACACCAAATGGTTATTATGTCAGCTATGACACTTGGGGTAATAAAGAAGAGGTAGATCCCGCTAACATAAGGCCAATTCAAGAAGGAACTGTTGATCCTTTGGTTGAAGCTGAGCGAGTTGCTGAAGCTACAAAGCAGGCTATCAAACGGAAAATTGCGCAAGCGGCATCTGTTGATTTTCAGTCACGGAGTCTACCTGCAAAGCTTCGTATAGAGCCCGATGACCCTGAGGATGTGAAAGTTACCAAACGTAAGAAAATACATGCCTTTAAGTCTAAGATGCGGATGGAACAACTTGAAGTCACCCAAAATAAGCGGCAAAATGCTTGGCAGCAGTTCCAGACAACCAAGGGAAAAGCAAAAAAGATTGGTTTCTTCTCGGGAAGGAAGCGTGAGAGTATTTTTAAATCTCCTGATGATCCTCAAGGAAAGGTTGGTGTGACTGGAAGTGGGAAAGGTTTGACAGAGTTCCAGAGAAGAGAGAAGCATTTCCATCTGAAGGATGGTACAATCGAGAATGATGATTAG

Protein sequence

>MsG0080049032.01.T01

MIFDKPSKETNVCIQEHASVVSEYNSSIQLLRYSLNSNSGPCNAEFTNYRGEDVPPQFNRLQTVYIVSFYIAI*EEELNIKLLNDEPSNSEYVDMERELSEDLHTHFDHQHKFPVGTRVQAVYSDDGEWYDATVEAYTPNGYYVSYDTWGNKEEVDPANIRPIQEGTVDPLVEAERVAEATKQAIKRKIAQAASVDFQSRSLPAKLRIEPDDPEDVKVTKRKKIHAFKSKMRMEQLEVTQNKRQNAWQQFQTTKGKAKKIGFFSGRKRESIFKSPDDPQGKVGVTGSGKGLTEFQRREKHFHLKDGTIENDD*