Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000240.01.T01 | XP_003589224.2 | 76.216 | 185 | 15 | 2 | 9 | 164 | 54 | 238 | 1.90E-88 | 268 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000240.01.T01 | Q9SX77 | 51.667 | 180 | 58 | 2 | 14 | 164 | 78 | 257 | 1.85E-55 | 178 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000240.01.T01 | I3SGV1 | 76.216 | 185 | 15 | 2 | 9 | 164 | 54 | 238 | 9.07e-89 | 268 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047957.01 | MsG0180000240.01 | -0.803460 | 3.449425e-49 | 1.734401e-46 |
| MsG0080047959.01 | MsG0180000240.01 | -0.814120 | 1.811093e-51 | 1.204775e-48 |
| MsG0080048683.01 | MsG0180000240.01 | -0.816252 | 6.087152e-52 | 4.291528e-49 |
| MsG0080048761.01 | MsG0180000240.01 | 0.803170 | 3.962010e-49 | 1.977339e-46 |
| MsG0080048764.01 | MsG0180000240.01 | -0.820630 | 6.195850e-53 | 4.928144e-50 |
| MsG0080048809.01 | MsG0180000240.01 | 0.801198 | 1.008016e-48 | 4.784905e-46 |
| MsG0080049148.01 | MsG0180000240.01 | -0.803127 | 4.042376e-49 | 2.015184e-46 |
| MsG0180000010.01 | MsG0180000240.01 | 0.807934 | 3.965612e-50 | 2.237455e-47 |
| MsG0180000240.01 | MsG0180000470.01 | -0.838949 | 2.122261e-57 | 2.887027e-54 |
| MsG0180000240.01 | MsG0180000546.01 | -0.813942 | 1.982829e-51 | 1.312600e-48 |
| MsG0180000240.01 | MsG0180000828.01 | -0.838402 | 2.937785e-57 | 3.930550e-54 |
| MsG0180000240.01 | MsG0180001063.01 | -0.800794 | 1.219236e-48 | 5.728457e-46 |
| MsG0180000240.01 | MsG0180002750.01 | 0.822252 | 2.617045e-53 | 2.178830e-50 |
| MsG0180000240.01 | MsG0180002940.01 | 0.818922 | 1.522446e-52 | 1.155046e-49 |
| MsG0180000240.01 | MsG0180002977.01 | 0.851395 | 9.124397e-61 | 1.844417e-57 |
| MsG0180000240.01 | MsG0180003309.01 | 0.858962 | 5.744383e-63 | 1.492507e-59 |
| MsG0180000240.01 | MsG0180003429.01 | 0.819802 | 9.591923e-53 | 7.456997e-50 |
| MsG0180000240.01 | MsG0180003767.01 | 0.811613 | 6.414136e-51 | 3.988554e-48 |
| MsG0180000240.01 | MsG0180003854.01 | -0.803753 | 2.999146e-49 | 1.519410e-46 |
| MsG0180000240.01 | MsG0180004085.01 | -0.802948 | 4.403045e-49 | 2.184953e-46 |
| MsG0180000240.01 | MsG0180004257.01 | 0.803225 | 3.858754e-49 | 1.928485e-46 |
| MsG0180000240.01 | MsG0180004264.01 | -0.812354 | 4.421489e-51 | 2.805095e-48 |
| MsG0180000240.01 | MsG0180004600.01 | -0.841004 | 6.180810e-58 | 8.959186e-55 |
| MsG0180000240.01 | MsG0180004602.01 | -0.823609 | 1.263212e-53 | 1.092950e-50 |
| MsG0180000240.01 | MsG0180004603.01 | -0.816643 | 4.976221e-52 | 3.545806e-49 |
| MsG0180000240.01 | MsG0180004926.01 | -0.812429 | 4.259689e-51 | 2.707871e-48 |
| MsG0180000240.01 | MsG0180005001.01 | 0.819394 | 1.188613e-52 | 9.134965e-50 |
| MsG0180000240.01 | MsG0180005303.01 | 0.814670 | 1.369091e-51 | 9.243863e-49 |
| MsG0180000240.01 | MsG0180005457.01 | -0.810194 | 1.301483e-50 | 7.794440e-48 |
| MsG0180000240.01 | MsG0180005515.01 | 0.838247 | 3.221529e-57 | 4.289286e-54 |
| MsG0180000240.01 | MsG0180005544.01 | 0.811394 | 7.157358e-51 | 4.425281e-48 |
| MsG0180000240.01 | MsG0180005676.01 | 0.812230 | 4.706692e-51 | 2.975978e-48 |
| MsG0180000240.01 | MsG0180005881.01 | 0.877530 | 5.835035e-69 | 2.943682e-65 |
| MsG0180000240.01 | MsG0180006064.01 | 0.908337 | 1.909518e-81 | 3.529000e-77 |
| MsG0180000240.01 | MsG0180006210.01 | 0.815287 | 9.988795e-52 | 6.858349e-49 |
| MsG0180000240.01 | MsG0280006306.01 | 0.815335 | 9.747055e-52 | 6.701073e-49 |
| MsG0180000240.01 | MsG0280006346.01 | 0.858281 | 9.175679e-63 | 2.329540e-59 |
| MsG0180000240.01 | MsG0280006526.01 | 0.815257 | 1.013991e-51 | 6.956123e-49 |
| MsG0180000240.01 | MsG0280006554.01 | -0.809407 | 1.921060e-50 | 1.127029e-47 |
| MsG0180000240.01 | MsG0280006711.01 | 0.832195 | 1.085743e-55 | 1.204797e-52 |
| MsG0180000240.01 | MsG0280006753.01 | 0.840646 | 7.671095e-58 | 1.099714e-54 |
| MsG0180000240.01 | MsG0280007064.01 | -0.830838 | 2.343335e-55 | 2.498183e-52 |
| MsG0180000240.01 | MsG0280007066.01 | -0.808020 | 3.802653e-50 | 2.150419e-47 |
| MsG0180000240.01 | MsG0280007547.01 | -0.825650 | 4.175694e-54 | 3.829170e-51 |
| MsG0180000240.01 | MsG0280007723.01 | 0.846211 | 2.503723e-59 | 4.277407e-56 |
| MsG0180000240.01 | MsG0280007743.01 | 0.807216 | 5.632565e-50 | 3.119204e-47 |
| MsG0180000240.01 | MsG0280007864.01 | 0.867558 | 1.252616e-65 | 4.392305e-62 |
| MsG0180000240.01 | MsG0280008112.01 | -0.805764 | 1.140314e-49 | 6.083941e-47 |
| MsG0180000240.01 | MsG0280008660.01 | 0.853850 | 1.819089e-61 | 3.984903e-58 |
| MsG0180000240.01 | MsG0280008894.01 | -0.854967 | 8.649498e-62 | 1.965769e-58 |
| MsG0180000240.01 | MsG0280009395.01 | 0.841922 | 3.541949e-58 | 5.283524e-55 |
| MsG0180000240.01 | MsG0280009754.01 | -0.801238 | 9.896125e-49 | 4.702315e-46 |
| MsG0180000240.01 | MsG0280010146.01 | 0.857562 | 1.500245e-62 | 3.718248e-59 |
| MsG0180000240.01 | MsG0280010378.01 | -0.817617 | 3.004574e-52 | 2.198812e-49 |
| MsG0180000240.01 | MsG0280010443.01 | -0.837535 | 4.908294e-57 | 6.395008e-54 |
| MsG0180000240.01 | MsG0280010551.01 | -0.817310 | 3.523176e-52 | 2.556710e-49 |
| MsG0180000240.01 | MsG0280010604.01 | 0.857227 | 1.884658e-62 | 4.618753e-59 |
| MsG0180000240.01 | MsG0280010687.01 | 0.817534 | 3.137953e-52 | 2.291182e-49 |
| MsG0180000240.01 | MsG0280011059.01 | 0.917791 | 3.448311e-86 | 1.014443e-81 |
| MsG0180000240.01 | MsG0280011163.01 | -0.813725 | 2.212884e-51 | 1.456446e-48 |
| MsG0180000240.01 | MsG0280011376.01 | -0.838807 | 2.308536e-57 | 3.127042e-54 |
| MsG0180000240.01 | MsG0380011609.01 | -0.807206 | 5.659612e-50 | 3.133425e-47 |
| MsG0180000240.01 | MsG0380011895.01 | -0.802159 | 6.402017e-49 | 3.113858e-46 |
| MsG0180000240.01 | MsG0380012005.01 | -0.829282 | 5.617034e-55 | 5.723763e-52 |
| MsG0180000240.01 | MsG0380012279.01 | 0.800162 | 1.640263e-48 | 7.583794e-46 |
| MsG0180000240.01 | MsG0380014225.01 | 0.831490 | 1.621045e-55 | 1.761829e-52 |
| MsG0180000240.01 | MsG0380014251.01 | -0.807038 | 6.142754e-50 | 3.386037e-47 |
| MsG0180000240.01 | MsG0380014401.01 | 0.826415 | 2.746699e-54 | 2.574357e-51 |
| MsG0180000240.01 | MsG0380014551.01 | 0.823905 | 1.076674e-53 | 9.394013e-51 |
| MsG0180000240.01 | MsG0380014706.01 | -0.802497 | 5.455847e-49 | 2.676486e-46 |
| MsG0180000240.01 | MsG0380014770.01 | -0.850502 | 1.628724e-60 | 3.196629e-57 |
| MsG0180000240.01 | MsG0380015066.01 | 0.812066 | 5.110074e-51 | 3.216480e-48 |
| MsG0180000240.01 | MsG0380015166.01 | -0.810413 | 1.167019e-50 | 7.029773e-48 |
| MsG0180000240.01 | MsG0380015212.01 | 0.809794 | 1.586388e-50 | 9.402940e-48 |
| MsG0180000240.01 | MsG0380015374.01 | -0.823957 | 1.047120e-53 | 9.149555e-51 |
| MsG0180000240.01 | MsG0380015497.01 | -0.808563 | 2.913245e-50 | 1.671120e-47 |
| MsG0180000240.01 | MsG0380015849.01 | 0.859040 | 5.443343e-63 | 1.417889e-59 |
| MsG0180000240.01 | MsG0380016118.01 | 0.816822 | 4.535798e-52 | 3.247939e-49 |
| MsG0180000240.01 | MsG0380016160.01 | 0.805539 | 1.271591e-49 | 6.744562e-47 |
| MsG0180000240.01 | MsG0380016182.01 | -0.803667 | 3.125526e-49 | 1.579844e-46 |
| MsG0180000240.01 | MsG0380016191.01 | 0.871355 | 7.278307e-67 | 2.927114e-63 |
| MsG0180000240.01 | MsG0380016347.01 | 0.820904 | 5.360460e-53 | 4.296845e-50 |
| MsG0180000240.01 | MsG0380016823.01 | 0.805796 | 1.123079e-49 | 5.996625e-47 |
| MsG0180000240.01 | MsG0380016828.01 | 0.853273 | 2.664270e-61 | 5.725154e-58 |
| MsG0180000240.01 | MsG0380017178.01 | 0.858916 | 5.931820e-63 | 1.538719e-59 |
| MsG0180000240.01 | MsG0380017263.01 | 0.875399 | 3.176458e-68 | 1.480835e-64 |
| MsG0180000240.01 | MsG0380017266.01 | 0.854562 | 1.133515e-61 | 2.541892e-58 |
| MsG0180000240.01 | MsG0380017495.01 | -0.817740 | 2.818844e-52 | 2.069989e-49 |
| MsG0180000240.01 | MsG0380017551.01 | 0.848586 | 5.578822e-60 | 1.028682e-56 |
| MsG0180000240.01 | MsG0380017584.01 | -0.817286 | 3.568773e-52 | 2.588054e-49 |
| MsG0180000240.01 | MsG0380017781.01 | 0.825536 | 4.442945e-54 | 4.060949e-51 |
| MsG0180000240.01 | MsG0380017941.01 | -0.807886 | 4.059662e-50 | 2.287617e-47 |
| MsG0180000240.01 | MsG0480018236.01 | -0.831262 | 1.843762e-55 | 1.990248e-52 |
| MsG0180000240.01 | MsG0480018331.01 | -0.842223 | 2.947891e-58 | 4.439304e-55 |
| MsG0180000240.01 | MsG0480018883.01 | -0.846785 | 1.746585e-59 | 3.040212e-56 |
| MsG0180000240.01 | MsG0480018964.01 | -0.819066 | 1.411909e-52 | 1.075343e-49 |
| MsG0180000240.01 | MsG0480019163.01 | 0.823336 | 1.463271e-53 | 1.256236e-50 |
| MsG0180000240.01 | MsG0480019689.01 | 0.822370 | 2.456572e-53 | 2.052339e-50 |
| MsG0180000240.01 | MsG0480020327.01 | 0.852055 | 5.931420e-61 | 1.224386e-57 |
| MsG0180000240.01 | MsG0480020410.01 | 0.816257 | 6.071754e-52 | 4.281250e-49 |
| MsG0180000240.01 | MsG0480020765.01 | -0.813166 | 2.937473e-51 | 1.903973e-48 |
| MsG0180000240.01 | MsG0480020788.01 | -0.802953 | 4.391974e-49 | 2.179795e-46 |
| MsG0180000240.01 | MsG0480020935.01 | 0.841087 | 5.878070e-58 | 8.541777e-55 |
| MsG0180000240.01 | MsG0480021274.01 | -0.819690 | 1.017310e-52 | 7.883694e-50 |
| MsG0180000240.01 | MsG0480021558.01 | -0.800269 | 1.560214e-48 | 7.233673e-46 |
| MsG0180000240.01 | MsG0480021776.01 | 0.837718 | 4.406473e-57 | 5.774041e-54 |
| MsG0180000240.01 | MsG0480021853.01 | -0.820981 | 5.146599e-53 | 4.134577e-50 |
| MsG0180000240.01 | MsG0480021925.01 | -0.800539 | 1.374796e-48 | 6.417616e-46 |
| MsG0180000240.01 | MsG0480022052.01 | 0.807826 | 4.181619e-50 | 2.352681e-47 |
| MsG0180000240.01 | MsG0480022213.01 | 0.807503 | 4.895812e-50 | 2.731594e-47 |
| MsG0180000240.01 | MsG0480022259.01 | -0.803138 | 4.021890e-49 | 2.005538e-46 |
| MsG0180000240.01 | MsG0480022533.01 | -0.824473 | 7.918091e-54 | 7.020366e-51 |
| MsG0180000240.01 | MsG0480022615.01 | 0.917060 | 8.407131e-86 | 2.380623e-81 |
| MsG0180000240.01 | MsG0480022686.01 | 0.808843 | 2.537174e-50 | 1.466122e-47 |
| MsG0180000240.01 | MsG0480022985.01 | -0.811094 | 8.313328e-51 | 5.099625e-48 |
| MsG0180000240.01 | MsG0480023248.01 | -0.815757 | 7.851313e-52 | 5.460912e-49 |
| MsG0180000240.01 | MsG0480023251.01 | -0.838933 | 2.141979e-57 | 2.912574e-54 |
| MsG0180000240.01 | MsG0480023814.01 | -0.827981 | 1.158623e-54 | 1.136455e-51 |
| MsG0180000240.01 | MsG0480023936.01 | 0.907825 | 3.331355e-81 | 6.012070e-77 |
| MsG0180000240.01 | MsG0580024304.01 | -0.800391 | 1.473563e-48 | 6.853140e-46 |
| MsG0180000240.01 | MsG0580024363.01 | 0.906576 | 1.280224e-80 | 2.182212e-76 |
| MsG0180000240.01 | MsG0580024790.01 | 0.855033 | 8.276421e-62 | 1.885140e-58 |
| MsG0180000240.01 | MsG0580024928.01 | 0.872241 | 3.700251e-67 | 1.537189e-63 |
| MsG0180000240.01 | MsG0580025182.01 | 0.869515 | 2.922184e-66 | 1.099941e-62 |
| MsG0180000240.01 | MsG0580025407.01 | 0.819302 | 1.247360e-52 | 9.561743e-50 |
| MsG0180000240.01 | MsG0580025448.01 | -0.833775 | 4.393766e-56 | 5.111458e-53 |
| MsG0180000240.01 | MsG0580025832.01 | -0.804318 | 2.288666e-49 | 1.176374e-46 |
| MsG0180000240.01 | MsG0580025987.01 | -0.802498 | 5.452155e-49 | 2.674770e-46 |
| MsG0180000240.01 | MsG0580026777.01 | -0.812733 | 3.654130e-51 | 2.341521e-48 |
| MsG0180000240.01 | MsG0580027401.01 | -0.803262 | 3.790925e-49 | 1.896398e-46 |
| MsG0180000240.01 | MsG0580027766.01 | -0.803860 | 2.849464e-49 | 1.447571e-46 |
| MsG0180000240.01 | MsG0580027833.01 | -0.820691 | 5.999741e-53 | 4.780471e-50 |
| MsG0180000240.01 | MsG0580028613.01 | 0.834953 | 2.224002e-56 | 2.680455e-53 |
| MsG0180000240.01 | MsG0580028901.01 | -0.809322 | 2.003580e-50 | 1.172759e-47 |
| MsG0180000240.01 | MsG0580028990.01 | -0.818876 | 1.559265e-52 | 1.181400e-49 |
| MsG0180000240.01 | MsG0580029514.01 | 0.811552 | 6.611187e-51 | 4.104761e-48 |
| MsG0180000240.01 | MsG0580029999.01 | 0.891077 | 5.518786e-74 | 4.768094e-70 |
| MsG0180000240.01 | MsG0680030843.01 | 0.837860 | 4.050801e-57 | 5.330991e-54 |
| MsG0180000240.01 | MsG0680030882.01 | -0.806181 | 9.317325e-50 | 5.024431e-47 |
| MsG0180000240.01 | MsG0680031355.01 | -0.802602 | 5.190839e-49 | 2.553357e-46 |
| MsG0180000240.01 | MsG0680031377.01 | 0.819108 | 1.380868e-52 | 1.052931e-49 |
| MsG0180000240.01 | MsG0680031379.01 | -0.839644 | 1.401069e-57 | 1.947011e-54 |
| MsG0180000240.01 | MsG0680031446.01 | 0.892470 | 1.541069e-74 | 1.411106e-70 |
| MsG0180000240.01 | MsG0680031805.01 | 0.820385 | 7.053508e-53 | 5.573244e-50 |
| MsG0180000240.01 | MsG0680032058.01 | -0.809471 | 1.861912e-50 | 1.094114e-47 |
| MsG0180000240.01 | MsG0680032204.01 | -0.814985 | 1.165299e-51 | 7.935361e-49 |
| MsG0180000240.01 | MsG0680032460.01 | 0.866897 | 2.037476e-65 | 6.979577e-62 |
| MsG0180000240.01 | MsG0680032996.01 | -0.813977 | 1.947571e-51 | 1.290523e-48 |
| MsG0180000240.01 | MsG0680034036.01 | -0.801984 | 6.956506e-49 | 3.368302e-46 |
| MsG0180000240.01 | MsG0680034230.01 | -0.800610 | 1.329630e-48 | 6.218100e-46 |
| MsG0180000240.01 | MsG0680035444.01 | -0.808603 | 2.856435e-50 | 1.640217e-47 |
| MsG0180000240.01 | MsG0780035948.01 | -0.846898 | 1.626491e-59 | 2.841123e-56 |
| MsG0180000240.01 | MsG0780037284.01 | 0.836997 | 6.738533e-57 | 8.636319e-54 |
| MsG0180000240.01 | MsG0780037457.01 | -0.803528 | 3.339794e-49 | 1.682291e-46 |
| MsG0180000240.01 | MsG0780037506.01 | 0.809870 | 1.528104e-50 | 9.075161e-48 |
| MsG0180000240.01 | MsG0780037512.01 | -0.806656 | 7.400098e-50 | 4.038719e-47 |
| MsG0180000240.01 | MsG0780038309.01 | 0.836143 | 1.111895e-56 | 1.388936e-53 |
| MsG0180000240.01 | MsG0780038473.01 | 0.811963 | 5.381891e-51 | 3.378120e-48 |
| MsG0180000240.01 | MsG0780038906.01 | -0.808654 | 2.785042e-50 | 1.601338e-47 |
| MsG0180000240.01 | MsG0780039867.01 | 0.917178 | 7.282343e-86 | 2.073955e-81 |
| MsG0180000240.01 | MsG0780039952.01 | -0.802632 | 5.115656e-49 | 2.518347e-46 |
| MsG0180000240.01 | MsG0780040148.01 | 0.806031 | 1.002067e-49 | 5.382840e-47 |
| MsG0180000240.01 | MsG0780040566.01 | 0.848208 | 7.096791e-60 | 1.292573e-56 |
| MsG0180000240.01 | MsG0780040576.01 | 0.883734 | 3.490041e-71 | 2.240122e-67 |
| MsG0180000240.01 | MsG0780040596.01 | -0.820637 | 6.175503e-53 | 4.912851e-50 |
| MsG0180000240.01 | MsG0780040739.01 | 0.806243 | 9.043910e-50 | 4.884588e-47 |
| MsG0180000240.01 | MsG0780041015.01 | 0.852222 | 5.319817e-61 | 1.103969e-57 |
| MsG0180000240.01 | MsG0780041386.01 | -0.809558 | 1.783086e-50 | 1.050258e-47 |
| MsG0180000240.01 | MsG0780041441.01 | -0.821937 | 3.095820e-53 | 2.554338e-50 |
| MsG0180000240.01 | MsG0780041507.01 | -0.818231 | 2.183105e-52 | 1.624741e-49 |
| MsG0180000240.01 | MsG0780041734.01 | 0.807306 | 5.392107e-50 | 2.993082e-47 |
| MsG0180000240.01 | MsG0880041861.01 | -0.804979 | 1.665742e-49 | 8.709566e-47 |
| MsG0180000240.01 | MsG0880042435.01 | 0.825477 | 4.588730e-54 | 4.187005e-51 |
| MsG0180000240.01 | MsG0880042698.01 | -0.807826 | 4.180473e-50 | 2.352075e-47 |
| MsG0180000240.01 | MsG0880042966.01 | -0.816729 | 4.758997e-52 | 3.399028e-49 |
| MsG0180000240.01 | MsG0880043937.01 | -0.812822 | 3.494278e-51 | 2.244107e-48 |
| MsG0180000240.01 | MsG0880044062.01 | 0.813388 | 2.625794e-51 | 1.712467e-48 |
| MsG0180000240.01 | MsG0880044389.01 | 0.833404 | 5.437904e-56 | 6.256101e-53 |
| MsG0180000240.01 | MsG0880044455.01 | 0.863436 | 2.493251e-64 | 7.556891e-61 |
| MsG0180000240.01 | MsG0880044611.01 | 0.836742 | 7.831018e-57 | 9.959575e-54 |
| MsG0180000240.01 | MsG0880045555.01 | 0.830793 | 2.404292e-55 | 2.559704e-52 |
| MsG0180000240.01 | MsG0880045605.01 | 0.850524 | 1.606324e-60 | 3.155051e-57 |
| MsG0180000240.01 | MsG0880045707.01 | 0.819930 | 8.964720e-53 | 6.994293e-50 |
| MsG0180000240.01 | MsG0880045765.01 | -0.801267 | 9.761002e-49 | 4.641450e-46 |
| MsG0180000240.01 | MsG0880046073.01 | -0.813401 | 2.607663e-51 | 1.701267e-48 |
| MsG0180000240.01 | MsG0880046384.01 | 0.856751 | 2.603649e-62 | 6.277378e-59 |
| MsG0180000240.01 | MsG0880046457.01 | -0.812753 | 3.617460e-51 | 2.319175e-48 |
| MsG0180000240.01 | MsG0880046809.01 | -0.804429 | 2.169456e-49 | 1.118287e-46 |
| MsG0180000240.01 | MsG0880047689.01 | 0.850796 | 1.346887e-60 | 2.669512e-57 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000240.01.T01 | MTR_1g019810 | 76.216 | 185 | 15 | 2 | 9 | 164 | 54 | 238 | 2.30e-92 | 268 |
| MsG0180000240.01.T01 | MTR_1g019810 | 96.000 | 125 | 5 | 0 | 9 | 133 | 54 | 178 | 1.40e-85 | 251 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000240.01.T01 | AT1G47420 | 51.667 | 180 | 58 | 2 | 14 | 164 | 78 | 257 | 1.88e-56 | 178 |
Find 36 sgRNAs with CRISPR-Local
Find 154 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTGATCCCTTATCCTATC+TGG | 0.119636 | 1:+3288858 | MsG0180000240.01.T01:CDS |
| CTGTTGCAGGTTACGGTTCT+TGG | 0.177677 | 1:+3288886 | MsG0180000240.01.T01:CDS |
| CTATCTGGGGTTTCTGTTGC+AGG | 0.212583 | 1:+3288873 | MsG0180000240.01.T01:CDS |
| CTTGGAACTTCTGGACTTGC+AGG | 0.234009 | 1:+3288904 | MsG0180000240.01.T01:CDS |
| AGGATTTGTTGGCTGAAAAT+TGG | 0.234472 | 1:+3287052 | MsG0180000240.01.T01:CDS |
| GTTACGGTTCTTGGAACTTC+TGG | 0.243971 | 1:+3288895 | MsG0180000240.01.T01:CDS |
| CATTCTTAACACCTTGAAAA+TGG | 0.246950 | 1:+3287203 | MsG0180000240.01.T01:CDS |
| GCCCAGGCTGTTGAGGAGTT+TGG | 0.326153 | 1:+3287177 | MsG0180000240.01.T01:CDS |
| AGGTTGTGACCAACGTGTTC+CGG | 0.337909 | 1:+3287151 | MsG0180000240.01.T01:CDS |
| TCTGATCCCTTATCCTATCT+GGG | 0.339146 | 1:+3288859 | MsG0180000240.01.T01:CDS |
| GGTTGTGACCAACGTGTTCC+GGG | 0.394752 | 1:+3287152 | MsG0180000240.01.T01:CDS |
| GGGGTTTCTGTTGCAGGTTA+CGG | 0.421993 | 1:+3288879 | MsG0180000240.01.T01:CDS |
| TGAAAATTGGAGTGAACTTT+CGG | 0.427877 | 1:+3287065 | MsG0180000240.01.T01:CDS |
| CAGAAACCCCAGATAGGATA+AGG | 0.432248 | 1:-3288866 | None:intergenic |
| CAACGTGTTCCGGGCTGCCC+AGG | 0.437017 | 1:+3287161 | MsG0180000240.01.T01:CDS |
| CACCAAACTCCTCAACAGCC+TGG | 0.455913 | 1:-3287179 | None:intergenic |
| TGCAGGTCTCCTTTCTCAAA+TGG | 0.464321 | 1:+3286949 | MsG0180000240.01.T01:CDS |
| TTGAAAACGCTGTTAAGCTC+AGG | 0.480680 | 1:-3287030 | None:intergenic |
| ATGGAAATTGATGACAGCAT+TGG | 0.480709 | 1:+3287222 | MsG0180000240.01.T01:CDS |
| CCGGGCTGCCCAGGCTGTTG+AGG | 0.484832 | 1:+3287170 | MsG0180000240.01.T01:CDS |
| CCTCAACAGCCTGGGCAGCC+CGG | 0.493044 | 1:-3287170 | None:intergenic |
| CTCCCTATGCCATTTGAGAA+AGG | 0.499228 | 1:-3286958 | None:intergenic |
| ACCAAACTCCTCAACAGCCT+GGG | 0.509277 | 1:-3287178 | None:intergenic |
| CTGCAACAGAAACCCCAGAT+AGG | 0.513561 | 1:-3288872 | None:intergenic |
| AGAAACCCCAGATAGGATAA+GGG | 0.516453 | 1:-3288865 | None:intergenic |
| CTCCTTTCTCAAATGGCATA+GGG | 0.521545 | 1:+3286956 | MsG0180000240.01.T01:CDS |
| ACATGCATTGTCTAAAAGTA+CGG | 0.522315 | 1:+3287110 | MsG0180000240.01.T01:CDS |
| TCTCCTTTCTCAAATGGCAT+AGG | 0.527635 | 1:+3286955 | MsG0180000240.01.T01:CDS |
| CTGATCCCTTATCCTATCTG+GGG | 0.539699 | 1:+3288860 | MsG0180000240.01.T01:CDS |
| CAGGCTGTTGAGGAGTTTGG+TGG | 0.550683 | 1:+3287180 | MsG0180000240.01.T01:CDS |
| AAAAGTACGGAAGACAAAGC+TGG | 0.589361 | 1:+3287123 | MsG0180000240.01.T01:CDS |
| TGAAAACGCTGTTAAGCTCA+GGG | 0.599564 | 1:-3287029 | None:intergenic |
| GGAAGACAAAGCTGGTAAAG+AGG | 0.606264 | 1:+3287131 | MsG0180000240.01.T01:CDS |
| GATGACAGCATTGGATTGAG+TGG | 0.638728 | 1:+3287231 | MsG0180000240.01.T01:CDS |
| CTGGGCAGCCCGGAACACGT+TGG | 0.682652 | 1:-3287160 | None:intergenic |
| CAGCATTGGATTGAGTGGCG+AGG | 0.695792 | 1:+3287236 | MsG0180000240.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTAAGATTACTTATTT+CGG | - | Chr1:3287393-3287412 | None:intergenic | 10.0% |
| !! | TTAATTAGAAAATGTTAAAA+AGG | + | Chr1:3288665-3288684 | MsG0180000240.01.T01:intron | 10.0% |
| !! | ACTAAAATATTTATGAATGA+AGG | + | Chr1:3288184-3288203 | MsG0180000240.01.T01:intron | 15.0% |
| !! | ATAATAATAATCAATCATAC+TGG | - | Chr1:3288765-3288784 | None:intergenic | 15.0% |
| !! | TAATAATAATCAATCATACT+GGG | - | Chr1:3288764-3288783 | None:intergenic | 15.0% |
| !!! | ATTATTTTTTCAGACATTTT+TGG | + | Chr1:3288616-3288635 | MsG0180000240.01.T01:intron | 15.0% |
| !!! | TTTTAAAATGTTATTACCAA+CGG | + | Chr1:3287816-3287835 | MsG0180000240.01.T01:intron | 15.0% |
| !! | ATGTCTGAAAAAATAATTCA+AGG | - | Chr1:3288613-3288632 | None:intergenic | 20.0% |
| !!! | AAAATTTGAAATTGTCGAAA+CGG | - | Chr1:3288472-3288491 | None:intergenic | 20.0% |
| !!! | CATTTAACTACATATTTTCA+AGG | - | Chr1:3288526-3288545 | None:intergenic | 20.0% |
| !!! | TATTTTAGTATTAGTTGAAG+AGG | - | Chr1:3288173-3288192 | None:intergenic | 20.0% |
| ! | AAAGGTAAAATAACTCATGA+CGG | + | Chr1:3288683-3288702 | MsG0180000240.01.T01:intron | 25.0% |
| ! | AGAATAAAGAAGAAATGCAA+CGG | - | Chr1:3288727-3288746 | None:intergenic | 25.0% |
| ! | ATTATATATGTCACAATTGC+AGG | + | Chr1:3288546-3288565 | MsG0180000240.01.T01:intron | 25.0% |
| ! | CAAATTAGTTCAAAAAACAG+CGG | + | Chr1:3287290-3287309 | MsG0180000240.01.T01:intron | 25.0% |
| ! | CCTAAGTAAAAATCAAAAGT+CGG | - | Chr1:3287560-3287579 | None:intergenic | 25.0% |
| ! | TAATTACTTATTTGCCATGT+GGG | + | Chr1:3288785-3288804 | MsG0180000240.01.T01:intron | 25.0% |
| ! | TCTAATTAATGACTACACAT+GGG | - | Chr1:3288654-3288673 | None:intergenic | 25.0% |
| ! | TCTGAAAAAATAATTCAAGG+AGG | - | Chr1:3288610-3288629 | None:intergenic | 25.0% |
| ! | TTAATTACTTATTTGCCATG+TGG | + | Chr1:3288784-3288803 | MsG0180000240.01.T01:intron | 25.0% |
| ! | TTCTAATTAATGACTACACA+TGG | - | Chr1:3288655-3288674 | None:intergenic | 25.0% |
| !! | AAATTTGAAATTGTCGAAAC+GGG | - | Chr1:3288471-3288490 | None:intergenic | 25.0% |
| !! | ATATAAGTCCCACATAATTT+TGG | - | Chr1:3288067-3288086 | None:intergenic | 25.0% |
| !! | CCTACTGATTAAAATTCAAA+TGG | - | Chr1:3288103-3288122 | None:intergenic | 25.0% |
| !! | TCTATTGGTTAAAATTCACA+TGG | + | Chr1:3288035-3288054 | MsG0180000240.01.T01:intron | 25.0% |
| !! | TTTTTATGTTTAGCAAAACC+TGG | + | Chr1:3287471-3287490 | MsG0180000240.01.T01:intron | 25.0% |
| !!! | CCATTTGAATTTTAATCAGT+AGG | + | Chr1:3288100-3288119 | MsG0180000240.01.T01:intron | 25.0% |
| !!! | TCTTGTTATTTGAACTTAAG+AGG | + | Chr1:3288280-3288299 | MsG0180000240.01.T01:intron | 25.0% |
| !!! | TTTTTTCAGACATTTTTGGT+TGG | + | Chr1:3288620-3288639 | MsG0180000240.01.T01:intron | 25.0% |
| AAAAAACATTCACAGAATGC+AGG | + | Chr1:3286932-3286951 | MsG0180000240.01.T01:CDS | 30.0% | |
| AAGGTAAAATAACTCATGAC+GGG | + | Chr1:3288684-3288703 | MsG0180000240.01.T01:intron | 30.0% | |
| ACATGCATTGTCTAAAAGTA+CGG | + | Chr1:3287110-3287129 | MsG0180000240.01.T01:CDS | 30.0% | |
| AGTAAATTGAAATCGTTGGA+TGG | + | Chr1:3287329-3287348 | MsG0180000240.01.T01:intron | 30.0% | |
| CAATAGTGTCTCTAATGAAT+CGG | - | Chr1:3287498-3287517 | None:intergenic | 30.0% | |
| CATCAGTAAATTGAAATCGT+TGG | + | Chr1:3287325-3287344 | MsG0180000240.01.T01:intron | 30.0% | |
| CATTCTTAACACCTTGAAAA+TGG | + | Chr1:3287203-3287222 | MsG0180000240.01.T01:CDS | 30.0% | |
| GGATCTTACCAAAATTATGT+GGG | + | Chr1:3288056-3288075 | MsG0180000240.01.T01:intron | 30.0% | |
| GTCATGATCTTTCACAATTA+AGG | - | Chr1:3287949-3287968 | None:intergenic | 30.0% | |
| TGAAAATTGGAGTGAACTTT+CGG | + | Chr1:3287065-3287084 | MsG0180000240.01.T01:CDS | 30.0% | |
| TGGATCTTACCAAAATTATG+TGG | + | Chr1:3288055-3288074 | MsG0180000240.01.T01:intron | 30.0% | |
| TGGGACTTATATGATTTACT+GGG | + | Chr1:3288075-3288094 | MsG0180000240.01.T01:intron | 30.0% | |
| TTTCACACATATATAAGACC+TGG | + | Chr1:3287267-3287286 | MsG0180000240.01.T01:intron | 30.0% | |
| ! | GTCATCAATTTCCATTTTCA+AGG | - | Chr1:3287217-3287236 | None:intergenic | 30.0% |
| !! | AGAGCATTTTGCATATGATT+GGG | - | Chr1:3287597-3287616 | None:intergenic | 30.0% |
| !!! | CCGACTTTTGATTTTTACTT+AGG | + | Chr1:3287557-3287576 | MsG0180000240.01.T01:intron | 30.0% |
| !!! | GTTTTTTGAACTAATTTGCC+AGG | - | Chr1:3287288-3287307 | None:intergenic | 30.0% |
| AAATTGTCGAAACGGGTAAA+AGG | - | Chr1:3288464-3288483 | None:intergenic | 35.0% | |
| AACCAAATGTGATAGGTGAA+TGG | - | Chr1:3287531-3287550 | None:intergenic | 35.0% | |
| AGTCAGCATATTGGAATCAT+TGG | - | Chr1:3287434-3287453 | None:intergenic | 35.0% | |
| ATGTTATTACCAACGGCTTA+TGG | + | Chr1:3287823-3287842 | MsG0180000240.01.T01:intron | 35.0% | |
| CACTTAAAAATGAGATGCAG+TGG | + | Chr1:3287719-3287738 | MsG0180000240.01.T01:intron | 35.0% | |
| GATCATCAACCAAATGTGAT+AGG | - | Chr1:3287538-3287557 | None:intergenic | 35.0% | |
| GCTGAAACATATATTCCAGA+AGG | - | Chr1:3287971-3287990 | None:intergenic | 35.0% | |
| GTGGGACTTATATGATTTAC+TGG | + | Chr1:3288074-3288093 | MsG0180000240.01.T01:intron | 35.0% | |
| TACCATTCACCTATCACATT+TGG | + | Chr1:3287526-3287545 | MsG0180000240.01.T01:intron | 35.0% | |
| TCATTGGATGAAGATCAAAC+AGG | - | Chr1:3287418-3287437 | None:intergenic | 35.0% | |
| TTTCAGCTGAGAATTATGCT+AGG | + | Chr1:3287984-3288003 | MsG0180000240.01.T01:intron | 35.0% | |
| TTTGTTGGATCTCTATGACA+TGG | - | Chr1:3288404-3288423 | None:intergenic | 35.0% | |
| ! | ACCACCTATTTGAATGCTTT+TGG | + | Chr1:3287639-3287658 | MsG0180000240.01.T01:intron | 35.0% |
| ! | ATGGAAATTGATGACAGCAT+TGG | + | Chr1:3287222-3287241 | MsG0180000240.01.T01:CDS | 35.0% |
| ! | GATCCAACAAAGTTTTACGT+TGG | + | Chr1:3288413-3288432 | MsG0180000240.01.T01:intron | 35.0% |
| ! | TTTTGCATATGATTGGGCAA+AGG | - | Chr1:3287591-3287610 | None:intergenic | 35.0% |
| !! | AGGATTTGTTGGCTGAAAAT+TGG | + | Chr1:3287052-3287071 | MsG0180000240.01.T01:CDS | 35.0% |
| !! | CAGAGCATTTTGCATATGAT+TGG | - | Chr1:3287598-3287617 | None:intergenic | 35.0% |
| AGAAACCCCAGATAGGATAA+GGG | - | Chr1:3288868-3288887 | None:intergenic | 40.0% | |
| AGGCTTAGCACTGTAATCAA+TGG | + | Chr1:3288300-3288319 | MsG0180000240.01.T01:intron | 40.0% | |
| ATTTCGGACGCAAAATGATG+AGG | - | Chr1:3287377-3287396 | None:intergenic | 40.0% | |
| CAGCCAACGTAAAACTTTGT+TGG | - | Chr1:3288419-3288438 | None:intergenic | 40.0% | |
| CTCCTTTCTCAAATGGCATA+GGG | + | Chr1:3286956-3286975 | MsG0180000240.01.T01:CDS | 40.0% | |
| GACAAATATCCCCACTTAGT+GGG | - | Chr1:3288382-3288401 | None:intergenic | 40.0% | |
| TAAAAGGAGAGGGTTGTGTT+AGG | - | Chr1:3288448-3288467 | None:intergenic | 40.0% | |
| TCAAGGAGGAGTTTGAGAAA+GGG | - | Chr1:3288596-3288615 | None:intergenic | 40.0% | |
| TCCAACTCACACTCTTCTAT+TGG | + | Chr1:3288020-3288039 | MsG0180000240.01.T01:intron | 40.0% | |
| TCTCCTTTCTCAAATGGCAT+AGG | + | Chr1:3286955-3286974 | MsG0180000240.01.T01:CDS | 40.0% | |
| TCTGATCCCTTATCCTATCT+GGG | + | Chr1:3288859-3288878 | MsG0180000240.01.T01:CDS | 40.0% | |
| TGAAAACGCTGTTAAGCTCA+GGG | - | Chr1:3287032-3287051 | None:intergenic | 40.0% | |
| TGGAAACATGACAGATAGTC+TGG | + | Chr1:3287875-3287894 | MsG0180000240.01.T01:intron | 40.0% | |
| TGTAGAACTACTATCCCACA+TGG | - | Chr1:3288802-3288821 | None:intergenic | 40.0% | |
| TGTGAAAGATCATGACCTTC+TGG | + | Chr1:3287953-3287972 | MsG0180000240.01.T01:intron | 40.0% | |
| TTCAAGGAGGAGTTTGAGAA+AGG | - | Chr1:3288597-3288616 | None:intergenic | 40.0% | |
| TTCTGATCCCTTATCCTATC+TGG | + | Chr1:3288858-3288877 | MsG0180000240.01.T01:CDS | 40.0% | |
| TTGAAAACGCTGTTAAGCTC+AGG | - | Chr1:3287033-3287052 | None:intergenic | 40.0% | |
| ! | AAAAGTACGGAAGACAAAGC+TGG | + | Chr1:3287123-3287142 | MsG0180000240.01.T01:CDS | 40.0% |
| ! | ACCAATAGAAGAGTGTGAGT+TGG | - | Chr1:3288024-3288043 | None:intergenic | 40.0% |
| ! | TGAGCTTAACAGCGTTTTCA+AGG | + | Chr1:3287032-3287051 | MsG0180000240.01.T01:CDS | 40.0% |
| ! | TTCCAATATGCTGACTGTAG+TGG | + | Chr1:3287438-3287457 | MsG0180000240.01.T01:intron | 40.0% |
| ! | TTGTTGTTGTCGTCGAAACA+GGG | - | Chr1:3288348-3288367 | None:intergenic | 40.0% |
| !! | CAGCGTTTTCAAGGATTTGT+TGG | + | Chr1:3287041-3287060 | MsG0180000240.01.T01:CDS | 40.0% |
| !! | CAGGCCAAAAGCATTCAAAT+AGG | - | Chr1:3287646-3287665 | None:intergenic | 40.0% |
| !! | CTCTGCGTACCATTTTTGAT+CGG | + | Chr1:3287613-3287632 | MsG0180000240.01.T01:CDS | 40.0% |
| !! | GCCAAAAGCATTCAAATAGG+TGG | - | Chr1:3287643-3287662 | None:intergenic | 40.0% |
| !! | GGGGCAAGTTTCTAAAACTA+TGG | + | Chr1:3287855-3287874 | MsG0180000240.01.T01:intron | 40.0% |
| !! | TTTTAGAAACTTGCCCCCAT+TGG | - | Chr1:3287852-3287871 | None:intergenic | 40.0% |
| AAAATGAGATGCAGTGGCCT+TGG | + | Chr1:3287725-3287744 | MsG0180000240.01.T01:intron | 45.0% | |
| AGCCACTACAGTCAGCATAT+TGG | - | Chr1:3287443-3287462 | None:intergenic | 45.0% | |
| AGGGGTTCAAATAACGAGAG+TGG | - | Chr1:3288329-3288348 | None:intergenic | 45.0% | |
| CAGAAACCCCAGATAGGATA+AGG | - | Chr1:3288869-3288888 | None:intergenic | 45.0% | |
| CTGATCCCTTATCCTATCTG+GGG | + | Chr1:3288860-3288879 | MsG0180000240.01.T01:CDS | 45.0% | |
| GGAAGACAAAGCTGGTAAAG+AGG | + | Chr1:3287131-3287150 | MsG0180000240.01.T01:CDS | 45.0% | |
| GGACAAATATCCCCACTTAG+TGG | - | Chr1:3288383-3288402 | None:intergenic | 45.0% | |
| GTATGATACCTTTCCCCACT+CGG | - | Chr1:3287753-3287772 | None:intergenic | 45.0% | |
| GTTACGGTTCTTGGAACTTC+TGG | + | Chr1:3288895-3288914 | MsG0180000240.01.T01:CDS | 45.0% | |
| TATCCCCACTTAGTGGGATA+AGG | - | Chr1:3288376-3288395 | None:intergenic | 45.0% | |
| TCGAAACGGGTAAAAGGAGA+GGG | - | Chr1:3288458-3288477 | None:intergenic | 45.0% | |
| TGCAGGTCTCCTTTCTCAAA+TGG | + | Chr1:3286949-3286968 | MsG0180000240.01.T01:CDS | 45.0% | |
| TGTCTCTAATGAATCGGACC+AGG | - | Chr1:3287492-3287511 | None:intergenic | 45.0% | |
| TGTTGTTGTCGTCGAAACAG+GGG | - | Chr1:3288347-3288366 | None:intergenic | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | Chr1:3288370-3288389 | MsG0180000240.01.T01:intron | 45.0% |
| ! | AGCTCAGGGTCTTTTATGTC+AGG | - | Chr1:3287018-3287037 | None:intergenic | 45.0% |
| ! | ATCAGTAGGAGAGAGCGTAT+TGG | + | Chr1:3288114-3288133 | MsG0180000240.01.T01:intron | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | Chr1:3288369-3288388 | MsG0180000240.01.T01:intron | 45.0% |
| ! | CTCCCTATGCCATTTGAGAA+AGG | - | Chr1:3286961-3286980 | None:intergenic | 45.0% |
| ! | GATGACAGCATTGGATTGAG+TGG | + | Chr1:3287231-3287250 | MsG0180000240.01.T01:CDS | 45.0% |
| ! | GGTGGTGTACCGATCAAAAA+TGG | - | Chr1:3287625-3287644 | None:intergenic | 45.0% |
| ! | GTTGTTGTTGTCGTCGAAAC+AGG | - | Chr1:3288349-3288368 | None:intergenic | 45.0% |
| !! | AAGTTTTACGTTGGCTGTCG+AGG | + | Chr1:3288422-3288441 | MsG0180000240.01.T01:intron | 45.0% |
| !! | GTTGCTTTCAAGTTGAAGCG+CGG | + | Chr1:3287897-3287916 | MsG0180000240.01.T01:intron | 45.0% |
| AACGGCTTATGGCTGCCAAT+GGG | + | Chr1:3287834-3287853 | MsG0180000240.01.T01:intron | 50.0% | |
| AAGAAGGTGGAGCAGGAGTT+GGG | + | Chr1:3287683-3287702 | MsG0180000240.01.T01:intron | 50.0% | |
| ACCAAACTCCTCAACAGCCT+GGG | - | Chr1:3287181-3287200 | None:intergenic | 50.0% | |
| AGGTTGTGACCAACGTGTTC+CGG | + | Chr1:3287151-3287170 | MsG0180000240.01.T01:CDS | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | - | Chr1:3288371-3288390 | None:intergenic | 50.0% | |
| CTGCAACAGAAACCCCAGAT+AGG | - | Chr1:3288875-3288894 | None:intergenic | 50.0% | |
| CTGTTGCAGGTTACGGTTCT+TGG | + | Chr1:3288886-3288905 | MsG0180000240.01.T01:CDS | 50.0% | |
| CTTGGAACTTCTGGACTTGC+AGG | + | Chr1:3288904-3288923 | MsG0180000240.01.T01:CDS | 50.0% | |
| GGGGTTTCTGTTGCAGGTTA+CGG | + | Chr1:3288879-3288898 | MsG0180000240.01.T01:CDS | 50.0% | |
| GTCGAAACGGGTAAAAGGAG+AGG | - | Chr1:3288459-3288478 | None:intergenic | 50.0% | |
| TGAGAACTACCTGCGGAAGA+AGG | + | Chr1:3287667-3287686 | MsG0180000240.01.T01:intron | 50.0% | |
| TTCCGCAGGTAGTTCTCATC+AGG | - | Chr1:3287665-3287684 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | Chr1:3288368-3288387 | MsG0180000240.01.T01:intron | 50.0% |
| ! | CTATCTGGGGTTTCTGTTGC+AGG | + | Chr1:3288873-3288892 | MsG0180000240.01.T01:CDS | 50.0% |
| ACGGCTTATGGCTGCCAATG+GGG | + | Chr1:3287835-3287854 | MsG0180000240.01.T01:intron | 55.0% | |
| CAACGGCTTATGGCTGCCAA+TGG | + | Chr1:3287833-3287852 | MsG0180000240.01.T01:intron | 55.0% | |
| CACCAAACTCCTCAACAGCC+TGG | - | Chr1:3287182-3287201 | None:intergenic | 55.0% | |
| CAGGCTGTTGAGGAGTTTGG+TGG | + | Chr1:3287180-3287199 | MsG0180000240.01.T01:CDS | 55.0% | |
| CATTGGCAGCCATAAGCCGT+TGG | - | Chr1:3287835-3287854 | None:intergenic | 55.0% | |
| GAACTACCTGCGGAAGAAGG+TGG | + | Chr1:3287670-3287689 | MsG0180000240.01.T01:intron | 55.0% | |
| GAAGAAGGTGGAGCAGGAGT+TGG | + | Chr1:3287682-3287701 | MsG0180000240.01.T01:intron | 55.0% | |
| GGCCTGATGAGAACTACCTG+CGG | + | Chr1:3287660-3287679 | MsG0180000240.01.T01:intron | 55.0% | |
| GGTTGTGACCAACGTGTTCC+GGG | + | Chr1:3287152-3287171 | MsG0180000240.01.T01:CDS | 55.0% | |
| ! | CAGCATTGGATTGAGTGGCG+AGG | + | Chr1:3287236-3287255 | MsG0180000240.01.T01:CDS | 55.0% |
| CCTTGGTTCCGAGTGGGGAA+AGG | + | Chr1:3287742-3287761 | MsG0180000240.01.T01:intron | 60.0% | |
| CCTTTCCCCACTCGGAACCA+AGG | - | Chr1:3287745-3287764 | None:intergenic | 60.0% | |
| CGGCTTATGGCTGCCAATGG+GGG | + | Chr1:3287836-3287855 | MsG0180000240.01.T01:intron | 60.0% | |
| GCCCAGGCTGTTGAGGAGTT+TGG | + | Chr1:3287177-3287196 | MsG0180000240.01.T01:CDS | 60.0% | |
| ! | AGTGGCCTTGGTTCCGAGTG+GGG | + | Chr1:3287737-3287756 | MsG0180000240.01.T01:intron | 60.0% |
| ! | CAGTGGCCTTGGTTCCGAGT+GGG | + | Chr1:3287736-3287755 | MsG0180000240.01.T01:intron | 60.0% |
| CCTGCGGAAGAAGGTGGAGC+AGG | + | Chr1:3287676-3287695 | MsG0180000240.01.T01:intron | 65.0% | |
| CCTGCTCCACCTTCTTCCGC+AGG | - | Chr1:3287679-3287698 | None:intergenic | 65.0% | |
| ! | GCAGTGGCCTTGGTTCCGAG+TGG | + | Chr1:3287735-3287754 | MsG0180000240.01.T01:intron | 65.0% |
| CAACGTGTTCCGGGCTGCCC+AGG | + | Chr1:3287161-3287180 | MsG0180000240.01.T01:CDS | 70.0% | |
| CCTCAACAGCCTGGGCAGCC+CGG | - | Chr1:3287173-3287192 | None:intergenic | 70.0% | |
| CTGGGCAGCCCGGAACACGT+TGG | - | Chr1:3287163-3287182 | None:intergenic | 70.0% | |
| CCGGGCTGCCCAGGCTGTTG+AGG | + | Chr1:3287170-3287189 | MsG0180000240.01.T01:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 3286919 | 3288951 | 3286919 | ID=MsG0180000240.01;Name=MsG0180000240.01 |
| Chr1 | mRNA | 3286919 | 3288951 | 3286919 | ID=MsG0180000240.01.T01;Parent=MsG0180000240.01;Name=MsG0180000240.01.T01;_AED=0.43;_eAED=0.45;_QI=0|0.5|0|1|0.5|0.66|3|0|164 |
| Chr1 | exon | 3286919 | 3287257 | 3286919 | ID=MsG0180000240.01.T01:exon:6201;Parent=MsG0180000240.01.T01 |
| Chr1 | exon | 3287579 | 3287634 | 3287579 | ID=MsG0180000240.01.T01:exon:6200;Parent=MsG0180000240.01.T01 |
| Chr1 | exon | 3288852 | 3288951 | 3288852 | ID=MsG0180000240.01.T01:exon:6199;Parent=MsG0180000240.01.T01 |
| Chr1 | CDS | 3286919 | 3287257 | 3286919 | ID=MsG0180000240.01.T01:cds;Parent=MsG0180000240.01.T01 |
| Chr1 | CDS | 3287579 | 3287634 | 3287579 | ID=MsG0180000240.01.T01:cds;Parent=MsG0180000240.01.T01 |
| Chr1 | CDS | 3288852 | 3288951 | 3288852 | ID=MsG0180000240.01.T01:cds;Parent=MsG0180000240.01.T01 |
| Gene Sequence |
| Protein sequence |
