Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000546.01.T01 | GAU17699.1 | 64.184 | 282 | 48 | 4 | 9 | 241 | 1 | 278 | 6.70E-115 | 343 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000546.01.T01 | Q9SZ53 | 54.839 | 279 | 74 | 4 | 11 | 241 | 1 | 275 | 4.03E-96 | 288 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000546.01.T01 | G7I890 | 66.436 | 289 | 43 | 5 | 1 | 241 | 31 | 313 | 2.64e-120 | 357 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048761.01 | MsG0180000546.01 | -0.805518 | 1.284028e-49 | 6.806964e-47 |
| MsG0180000152.01 | MsG0180000546.01 | 0.830107 | 3.537511e-55 | 3.691460e-52 |
| MsG0180000240.01 | MsG0180000546.01 | -0.813942 | 1.982829e-51 | 1.312600e-48 |
| MsG0180000271.01 | MsG0180000546.01 | 0.826394 | 2.779149e-54 | 2.603120e-51 |
| MsG0180000546.01 | MsG0180000550.01 | 0.854708 | 1.028291e-61 | 2.317086e-58 |
| MsG0180000546.01 | MsG0180000669.01 | 0.858296 | 9.081095e-63 | 2.306922e-59 |
| MsG0180000546.01 | MsG0180000679.01 | 0.828816 | 7.284471e-55 | 7.320269e-52 |
| MsG0180000546.01 | MsG0180000680.01 | 0.817342 | 3.465463e-52 | 2.517089e-49 |
| MsG0180000546.01 | MsG0180001141.01 | 0.824480 | 7.891489e-54 | 6.998159e-51 |
| MsG0180000546.01 | MsG0180001213.01 | 0.823612 | 1.260992e-53 | 1.091134e-50 |
| MsG0180000546.01 | MsG0180001243.01 | 0.803395 | 3.558253e-49 | 1.786111e-46 |
| MsG0180000546.01 | MsG0180001663.01 | 0.813720 | 2.218797e-51 | 1.460148e-48 |
| MsG0180000546.01 | MsG0180001712.01 | 0.830344 | 3.096907e-55 | 3.254038e-52 |
| MsG0180000546.01 | MsG0180002140.01 | 0.817837 | 2.680297e-52 | 1.973450e-49 |
| MsG0180000546.01 | MsG0180002482.01 | 0.802892 | 4.521487e-49 | 2.240643e-46 |
| MsG0180000546.01 | MsG0180003952.01 | 0.838007 | 3.712442e-57 | 4.907979e-54 |
| MsG0180000546.01 | MsG0180004025.01 | 0.821208 | 4.561953e-53 | 3.687955e-50 |
| MsG0180000546.01 | MsG0180004600.01 | 0.812290 | 4.567288e-51 | 2.892521e-48 |
| MsG0180000546.01 | MsG0180004886.01 | -0.813479 | 2.506410e-51 | 1.638695e-48 |
| MsG0180000546.01 | MsG0180004926.01 | 0.806992 | 6.284122e-50 | 3.459696e-47 |
| MsG0180000546.01 | MsG0180005052.01 | 0.841980 | 3.419669e-58 | 5.110540e-55 |
| MsG0180000546.01 | MsG0180005270.01 | 0.817640 | 2.970199e-52 | 2.175005e-49 |
| MsG0180000546.01 | MsG0180005382.01 | 0.809199 | 2.129167e-50 | 1.242215e-47 |
| MsG0180000546.01 | MsG0180005446.01 | 0.802065 | 6.696183e-49 | 3.249049e-46 |
| MsG0180000546.01 | MsG0180005686.01 | 0.870670 | 1.224005e-66 | 4.800852e-63 |
| MsG0180000546.01 | MsG0180005881.01 | -0.834499 | 2.894109e-56 | 3.440856e-53 |
| MsG0180000546.01 | MsG0180005960.01 | 0.801264 | 9.773850e-49 | 4.647231e-46 |
| MsG0180000546.01 | MsG0180006138.01 | 0.800548 | 1.368951e-48 | 6.391914e-46 |
| MsG0180000546.01 | MsG0180006144.01 | 0.813119 | 3.007197e-51 | 1.946701e-48 |
| MsG0180000546.01 | MsG0180006220.01 | 0.870899 | 1.029129e-66 | 4.071950e-63 |
| MsG0180000546.01 | MsG0280006406.01 | 0.807613 | 4.641244e-50 | 2.596734e-47 |
| MsG0180000546.01 | MsG0280006411.01 | 0.815940 | 7.143806e-52 | 4.993410e-49 |
| MsG0180000546.01 | MsG0280006708.01 | 0.838714 | 2.441119e-57 | 3.297474e-54 |
| MsG0180000546.01 | MsG0280007848.01 | 0.811899 | 5.558103e-51 | 3.482600e-48 |
| MsG0180000546.01 | MsG0280008613.01 | 0.804495 | 2.102193e-49 | 1.085447e-46 |
| MsG0180000546.01 | MsG0280008894.01 | 0.814642 | 1.388680e-51 | 9.369532e-49 |
| MsG0180000546.01 | MsG0280009395.01 | -0.827823 | 1.264192e-54 | 1.234166e-51 |
| MsG0180000546.01 | MsG0280010013.01 | 0.825515 | 4.494709e-54 | 4.105728e-51 |
| MsG0180000546.01 | MsG0280010204.01 | 0.853716 | 1.988692e-61 | 4.336789e-58 |
| MsG0180000546.01 | MsG0280010908.01 | -0.831724 | 1.419284e-55 | 1.553528e-52 |
| MsG0180000546.01 | MsG0280011059.01 | -0.830300 | 3.174771e-55 | 3.331321e-52 |
| MsG0180000546.01 | MsG0280011175.01 | 0.805554 | 1.262342e-49 | 6.698106e-47 |
| MsG0180000546.01 | MsG0280011376.01 | 0.881832 | 1.729150e-70 | 1.028545e-66 |
| MsG0180000546.01 | MsG0380011704.01 | 0.804058 | 2.591654e-49 | 1.323356e-46 |
| MsG0180000546.01 | MsG0380011895.01 | 0.855785 | 4.998197e-62 | 1.167415e-58 |
| MsG0180000546.01 | MsG0380012005.01 | 0.805832 | 1.103615e-49 | 5.898217e-47 |
| MsG0180000546.01 | MsG0380012050.01 | 0.852557 | 4.270741e-61 | 8.957443e-58 |
| MsG0180000546.01 | MsG0380012310.01 | 0.846575 | 1.992216e-59 | 3.444200e-56 |
| MsG0180000546.01 | MsG0380013467.01 | 0.834745 | 2.508749e-56 | 3.004325e-53 |
| MsG0180000546.01 | MsG0380013541.01 | 0.834622 | 2.694628e-56 | 3.215363e-53 |
| MsG0180000546.01 | MsG0380013853.01 | 0.841210 | 5.456653e-58 | 7.960170e-55 |
| MsG0180000546.01 | MsG0380014177.01 | 0.819041 | 1.430006e-52 | 1.088459e-49 |
| MsG0180000546.01 | MsG0380014548.01 | 0.811093 | 8.318652e-51 | 5.102652e-48 |
| MsG0180000546.01 | MsG0380014756.01 | 0.828596 | 8.234035e-55 | 8.221887e-52 |
| MsG0180000546.01 | MsG0380014770.01 | 0.857662 | 1.400610e-62 | 3.483207e-59 |
| MsG0180000546.01 | MsG0380015216.01 | 0.813002 | 3.191298e-51 | 2.059505e-48 |
| MsG0180000546.01 | MsG0380015533.01 | 0.817788 | 2.749608e-52 | 2.021747e-49 |
| MsG0180000546.01 | MsG0380015964.01 | 0.824571 | 7.512105e-54 | 6.679881e-51 |
| MsG0180000546.01 | MsG0380015965.01 | 0.847042 | 1.485346e-59 | 2.606797e-56 |
| MsG0180000546.01 | MsG0380016182.01 | 0.825638 | 4.202730e-54 | 3.852601e-51 |
| MsG0180000546.01 | MsG0380016191.01 | -0.835170 | 1.961173e-56 | 2.378989e-53 |
| MsG0180000546.01 | MsG0380016740.01 | 0.801210 | 1.002648e-48 | 4.760849e-46 |
| MsG0180000546.01 | MsG0380017022.01 | 0.815920 | 7.219542e-52 | 5.043429e-49 |
| MsG0180000546.01 | MsG0380017023.01 | 0.834544 | 2.818568e-56 | 3.355704e-53 |
| MsG0180000546.01 | MsG0380017085.01 | 0.802735 | 4.872060e-49 | 2.404780e-46 |
| MsG0180000546.01 | MsG0380017126.01 | 0.836619 | 8.413144e-57 | 1.065927e-53 |
| MsG0180000546.01 | MsG0380017178.01 | -0.845283 | 4.472290e-59 | 7.416281e-56 |
| MsG0180000546.01 | MsG0380017263.01 | -0.812102 | 5.020402e-51 | 3.163144e-48 |
| MsG0180000546.01 | MsG0380017265.01 | -0.802358 | 5.825802e-49 | 2.848119e-46 |
| MsG0180000546.01 | MsG0380017551.01 | -0.843520 | 1.332250e-58 | 2.089823e-55 |
| MsG0180000546.01 | MsG0380017680.01 | 0.840429 | 8.740750e-58 | 1.244706e-54 |
| MsG0180000546.01 | MsG0380017891.01 | -0.813854 | 2.073565e-51 | 1.369421e-48 |
| MsG0180000546.01 | MsG0380017941.01 | 0.807238 | 5.574043e-50 | 3.088552e-47 |
| MsG0180000546.01 | MsG0480018372.01 | 0.815581 | 8.589066e-52 | 5.945012e-49 |
| MsG0180000546.01 | MsG0480018473.01 | 0.802124 | 6.511718e-49 | 3.164220e-46 |
| MsG0180000546.01 | MsG0480018606.01 | 0.815022 | 1.143551e-51 | 7.795097e-49 |
| MsG0180000546.01 | MsG0480018906.01 | 0.826801 | 2.222304e-54 | 2.105803e-51 |
| MsG0180000546.01 | MsG0480018964.01 | 0.817858 | 2.650800e-52 | 1.952846e-49 |
| MsG0180000546.01 | MsG0480019126.01 | 0.805803 | 1.118978e-49 | 5.975893e-47 |
| MsG0180000546.01 | MsG0480019373.01 | 0.800574 | 1.352227e-48 | 6.318072e-46 |
| MsG0180000546.01 | MsG0480020327.01 | -0.816021 | 6.853889e-52 | 4.801594e-49 |
| MsG0180000546.01 | MsG0480020843.01 | 0.801741 | 7.802523e-49 | 3.754713e-46 |
| MsG0180000546.01 | MsG0480021164.01 | 0.839444 | 1.578456e-57 | 2.180309e-54 |
| MsG0180000546.01 | MsG0480021776.01 | -0.810792 | 9.665765e-51 | 5.881747e-48 |
| MsG0180000546.01 | MsG0480021853.01 | 0.820239 | 7.618997e-53 | 5.995196e-50 |
| MsG0180000546.01 | MsG0480021994.01 | 0.816189 | 6.288077e-52 | 4.425418e-49 |
| MsG0180000546.01 | MsG0480022035.01 | 0.805292 | 1.432497e-49 | 7.550140e-47 |
| MsG0180000546.01 | MsG0480022222.01 | 0.834283 | 3.278004e-56 | 3.872225e-53 |
| MsG0180000546.01 | MsG0480022739.01 | -0.814270 | 1.677794e-51 | 1.120696e-48 |
| MsG0180000546.01 | MsG0480022933.01 | 0.822765 | 1.987837e-53 | 1.679490e-50 |
| MsG0180000546.01 | MsG0480023652.01 | 0.807697 | 4.452816e-50 | 2.496878e-47 |
| MsG0180000546.01 | MsG0480023994.01 | 0.801806 | 7.569203e-49 | 3.648512e-46 |
| MsG0180000546.01 | MsG0580024114.01 | 0.800794 | 1.219236e-48 | 5.728457e-46 |
| MsG0180000546.01 | MsG0580024472.01 | 0.817136 | 3.856765e-52 | 2.785559e-49 |
| MsG0180000546.01 | MsG0580024494.01 | 0.800728 | 1.257984e-48 | 5.900664e-46 |
| MsG0180000546.01 | MsG0580024495.01 | 0.824040 | 1.001088e-53 | 8.766706e-51 |
| MsG0180000546.01 | MsG0580024805.01 | 0.806454 | 8.161325e-50 | 4.431707e-47 |
| MsG0180000546.01 | MsG0580025448.01 | 0.835043 | 2.111540e-56 | 2.551544e-53 |
| MsG0180000546.01 | MsG0580025638.01 | 0.808484 | 3.027972e-50 | 1.733433e-47 |
| MsG0180000546.01 | MsG0580025826.01 | 0.818660 | 1.745724e-52 | 1.314706e-49 |
| MsG0180000546.01 | MsG0580027034.01 | 0.808887 | 2.482683e-50 | 1.436283e-47 |
| MsG0180000546.01 | MsG0580027766.01 | 0.818905 | 1.535504e-52 | 1.164414e-49 |
| MsG0180000546.01 | MsG0580028901.01 | 0.820026 | 8.525761e-53 | 6.669889e-50 |
| MsG0180000546.01 | MsG0580029256.01 | 0.800109 | 1.681594e-48 | 7.764706e-46 |
| MsG0180000546.01 | MsG0580029355.01 | 0.843054 | 1.773463e-58 | 2.740970e-55 |
| MsG0180000546.01 | MsG0580029429.01 | 0.806566 | 7.730233e-50 | 4.209508e-47 |
| MsG0180000546.01 | MsG0580029999.01 | -0.810914 | 9.094842e-51 | 5.552688e-48 |
| MsG0180000546.01 | MsG0680030415.01 | 0.805962 | 1.036255e-49 | 5.556749e-47 |
| MsG0180000546.01 | MsG0680030636.01 | 0.880669 | 4.537455e-70 | 2.580982e-66 |
| MsG0180000546.01 | MsG0680030992.01 | 0.805449 | 1.328032e-49 | 7.027922e-47 |
| MsG0180000546.01 | MsG0680031334.01 | 0.827426 | 1.574814e-54 | 1.519867e-51 |
| MsG0180000546.01 | MsG0680031446.01 | -0.818736 | 1.677246e-52 | 1.265843e-49 |
| MsG0180000546.01 | MsG0680032430.01 | 0.809808 | 1.575541e-50 | 9.341797e-48 |
| MsG0180000546.01 | MsG0680034219.01 | 0.832075 | 1.162287e-55 | 1.285266e-52 |
| MsG0180000546.01 | MsG0680035278.01 | 0.833904 | 4.078883e-56 | 4.764005e-53 |
| MsG0180000546.01 | MsG0680035704.01 | 0.803519 | 3.353860e-49 | 1.688961e-46 |
| MsG0180000546.01 | MsG0780035948.01 | 0.803041 | 4.213122e-49 | 2.095647e-46 |
| MsG0180000546.01 | MsG0780035957.01 | 0.800089 | 1.697337e-48 | 7.833498e-46 |
| MsG0180000546.01 | MsG0780037082.01 | 0.856817 | 2.488785e-62 | 6.013858e-59 |
| MsG0180000546.01 | MsG0780037512.01 | 0.831675 | 1.459421e-55 | 1.594962e-52 |
| MsG0180000546.01 | MsG0780039143.01 | 0.808958 | 2.397827e-50 | 1.389860e-47 |
| MsG0180000546.01 | MsG0780039515.01 | -0.801360 | 9.342633e-49 | 4.452952e-46 |
| MsG0180000546.01 | MsG0780040596.01 | 0.834992 | 2.173966e-56 | 2.623145e-53 |
| MsG0180000546.01 | MsG0780041015.01 | -0.854477 | 1.199071e-61 | 2.681338e-58 |
| MsG0180000546.01 | MsG0780041101.01 | 0.813499 | 2.481264e-51 | 1.623136e-48 |
| MsG0180000546.01 | MsG0780041137.01 | 0.804896 | 1.733162e-49 | 9.043532e-47 |
| MsG0180000546.01 | MsG0780041192.01 | 0.800409 | 1.461067e-48 | 6.798186e-46 |
| MsG0180000546.01 | MsG0780041294.01 | 0.824438 | 8.073162e-54 | 7.150554e-51 |
| MsG0180000546.01 | MsG0780041345.01 | 0.812450 | 4.212960e-51 | 2.679739e-48 |
| MsG0180000546.01 | MsG0780041507.01 | 0.831880 | 1.298781e-55 | 1.428178e-52 |
| MsG0180000546.01 | MsG0780041747.01 | 0.802786 | 4.754530e-49 | 2.349853e-46 |
| MsG0180000546.01 | MsG0880042134.01 | 0.803437 | 3.487551e-49 | 1.752530e-46 |
| MsG0180000546.01 | MsG0880042294.01 | 0.828975 | 6.668124e-55 | 6.731680e-52 |
| MsG0180000546.01 | MsG0880042305.01 | 0.810786 | 9.691355e-51 | 5.896554e-48 |
| MsG0180000546.01 | MsG0880042314.01 | 0.833025 | 6.758469e-56 | 7.688009e-53 |
| MsG0180000546.01 | MsG0880042404.01 | 0.824643 | 7.224130e-54 | 6.437407e-51 |
| MsG0180000546.01 | MsG0880042436.01 | 0.803654 | 3.143706e-49 | 1.588546e-46 |
| MsG0180000546.01 | MsG0880042612.01 | 0.808047 | 3.752572e-50 | 2.123596e-47 |
| MsG0180000546.01 | MsG0880042794.01 | 0.893002 | 9.422892e-75 | 8.818873e-71 |
| MsG0180000546.01 | MsG0880043002.01 | 0.808035 | 3.773558e-50 | 2.134838e-47 |
| MsG0180000546.01 | MsG0880043003.01 | 0.814185 | 1.752385e-51 | 1.167804e-48 |
| MsG0180000546.01 | MsG0880043303.01 | 0.807715 | 4.415202e-50 | 2.476963e-47 |
| MsG0180000546.01 | MsG0880046072.01 | 0.803552 | 3.300683e-49 | 1.663622e-46 |
| MsG0180000546.01 | MsG0880046285.01 | 0.824555 | 7.573678e-54 | 6.731577e-51 |
| MsG0180000546.01 | MsG0880046930.01 | 0.827255 | 1.731175e-54 | 1.662462e-51 |
| MsG0180000546.01 | MsG0880047294.01 | 0.805153 | 1.531449e-49 | 8.043199e-47 |
| MsG0180000546.01 | MsG0880047689.01 | -0.800894 | 1.163515e-48 | 5.480895e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000546.01.T01 | MTR_1g014190 | 66.436 | 289 | 43 | 5 | 1 | 241 | 31 | 313 | 6.69e-124 | 357 |
| MsG0180000546.01.T01 | MTR_1g014190 | 67.384 | 279 | 39 | 4 | 11 | 241 | 1 | 275 | 1.00e-122 | 353 |
| MsG0180000546.01.T01 | MTR_3g105880 | 57.348 | 279 | 67 | 4 | 11 | 241 | 1 | 275 | 8.67e-103 | 303 |
| MsG0180000546.01.T01 | MTR_3g105880 | 57.348 | 279 | 67 | 4 | 11 | 241 | 1 | 275 | 3.60e-102 | 300 |
| MsG0180000546.01.T01 | MTR_4g007440 | 52.500 | 280 | 79 | 5 | 11 | 241 | 1 | 275 | 5.72e-91 | 273 |
| MsG0180000546.01.T01 | MTR_6g081850 | 36.181 | 199 | 98 | 8 | 62 | 241 | 80 | 268 | 4.52e-24 | 98.6 |
| MsG0180000546.01.T01 | MTR_4g123080 | 30.846 | 201 | 99 | 5 | 62 | 241 | 96 | 277 | 5.40e-22 | 93.6 |
| MsG0180000546.01.T01 | MTR_4g123080 | 30.846 | 201 | 99 | 5 | 62 | 241 | 114 | 295 | 7.04e-22 | 93.6 |
| MsG0180000546.01.T01 | MTR_5g024340 | 30.208 | 192 | 102 | 5 | 62 | 241 | 125 | 296 | 5.43e-21 | 90.9 |
| MsG0180000546.01.T01 | MTR_5g009370 | 33.831 | 201 | 90 | 7 | 62 | 241 | 88 | 266 | 1.08e-20 | 89.7 |
| MsG0180000546.01.T01 | MTR_3g107880 | 31.250 | 192 | 103 | 5 | 62 | 241 | 64 | 238 | 1.59e-20 | 89.0 |
| MsG0180000546.01.T01 | MTR_2g033000 | 26.906 | 223 | 122 | 5 | 41 | 241 | 79 | 282 | 1.79e-20 | 89.4 |
| MsG0180000546.01.T01 | MTR_3g107880 | 31.472 | 197 | 96 | 6 | 62 | 241 | 122 | 296 | 2.10e-20 | 89.4 |
| MsG0180000546.01.T01 | MTR_3g107880 | 31.472 | 197 | 96 | 6 | 62 | 241 | 121 | 295 | 2.37e-20 | 89.0 |
| MsG0180000546.01.T01 | MTR_5g080680 | 32.995 | 197 | 102 | 8 | 62 | 241 | 133 | 316 | 3.24e-20 | 89.0 |
| MsG0180000546.01.T01 | MTR_1g086350 | 28.641 | 206 | 97 | 6 | 62 | 241 | 17 | 198 | 1.47e-17 | 80.1 |
| MsG0180000546.01.T01 | MTR_4g116420 | 28.571 | 196 | 105 | 5 | 62 | 241 | 125 | 301 | 4.01e-17 | 80.1 |
| MsG0180000546.01.T01 | MTR_1g086350 | 27.193 | 228 | 115 | 7 | 41 | 241 | 81 | 284 | 4.52e-17 | 79.7 |
| MsG0180000546.01.T01 | MTR_3g451410 | 43.956 | 91 | 20 | 1 | 94 | 153 | 72 | 162 | 4.55e-17 | 76.6 |
| MsG0180000546.01.T01 | MTR_1g086350 | 27.193 | 228 | 115 | 7 | 41 | 241 | 97 | 300 | 5.59e-17 | 79.7 |
| MsG0180000546.01.T01 | MTR_4g123080 | 44.737 | 76 | 39 | 1 | 166 | 241 | 110 | 182 | 5.81e-15 | 72.8 |
| MsG0180000546.01.T01 | MTR_3g491830 | 31.081 | 222 | 98 | 9 | 63 | 241 | 91 | 300 | 6.46e-15 | 73.6 |
| MsG0180000546.01.T01 | MTR_4g125810 | 31.683 | 202 | 95 | 10 | 62 | 241 | 254 | 434 | 7.11e-15 | 73.9 |
| MsG0180000546.01.T01 | MTR_2g040500 | 29.384 | 211 | 109 | 7 | 62 | 241 | 268 | 469 | 1.48e-14 | 73.2 |
| MsG0180000546.01.T01 | MTR_4g094542 | 25.506 | 247 | 127 | 7 | 23 | 241 | 102 | 319 | 4.50e-14 | 71.2 |
| MsG0180000546.01.T01 | MTR_3g091060 | 28.497 | 193 | 102 | 9 | 62 | 241 | 126 | 295 | 1.01e-13 | 70.1 |
| MsG0180000546.01.T01 | MTR_2g008850 | 28.205 | 195 | 100 | 9 | 62 | 241 | 20 | 189 | 1.65e-13 | 68.2 |
| MsG0180000546.01.T01 | MTR_8g102550 | 30.435 | 207 | 98 | 9 | 57 | 241 | 147 | 329 | 1.92e-13 | 69.3 |
| MsG0180000546.01.T01 | MTR_1g115570 | 31.746 | 189 | 97 | 9 | 62 | 241 | 127 | 292 | 3.05e-13 | 68.6 |
| MsG0180000546.01.T01 | MTR_2g008850 | 25.843 | 267 | 136 | 13 | 2 | 241 | 4 | 235 | 3.46e-13 | 67.8 |
| MsG0180000546.01.T01 | MTR_5g080680 | 32.903 | 155 | 83 | 6 | 62 | 199 | 133 | 283 | 1.42e-12 | 66.2 |
| MsG0180000546.01.T01 | MTR_1g015110 | 27.404 | 208 | 102 | 8 | 62 | 241 | 291 | 477 | 1.59e-12 | 67.0 |
| MsG0180000546.01.T01 | MTR_3g104710 | 27.962 | 211 | 97 | 10 | 62 | 241 | 287 | 473 | 8.52e-12 | 64.7 |
| MsG0180000546.01.T01 | MTR_5g063940 | 28.205 | 195 | 100 | 8 | 62 | 241 | 20 | 189 | 1.46e-11 | 62.8 |
| MsG0180000546.01.T01 | MTR_5g063940 | 28.205 | 195 | 100 | 8 | 62 | 241 | 67 | 236 | 2.68e-11 | 62.4 |
| MsG0180000546.01.T01 | MTR_2g078760 | 26.178 | 191 | 117 | 7 | 62 | 245 | 118 | 291 | 6.38e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000546.01.T01 | AT4G31860 | 54.839 | 279 | 74 | 4 | 11 | 241 | 1 | 275 | 1.17e-97 | 286 |
| MsG0180000546.01.T01 | AT4G31860 | 54.839 | 279 | 74 | 4 | 11 | 241 | 1 | 275 | 1.88e-97 | 287 |
| MsG0180000546.01.T01 | AT4G31860 | 54.839 | 279 | 74 | 4 | 11 | 241 | 1 | 275 | 4.11e-97 | 288 |
| MsG0180000546.01.T01 | AT2G25070 | 54.480 | 279 | 75 | 4 | 11 | 241 | 1 | 275 | 8.10e-97 | 287 |
| MsG0180000546.01.T01 | AT2G25070 | 54.480 | 279 | 75 | 4 | 11 | 241 | 1 | 275 | 8.10e-97 | 287 |
| MsG0180000546.01.T01 | AT2G25620 | 31.282 | 195 | 103 | 7 | 62 | 241 | 129 | 307 | 3.45e-20 | 89.0 |
| MsG0180000546.01.T01 | AT2G25620 | 31.282 | 195 | 103 | 7 | 62 | 241 | 129 | 307 | 3.45e-20 | 89.0 |
| MsG0180000546.01.T01 | AT1G18030 | 32.338 | 201 | 103 | 8 | 62 | 241 | 110 | 298 | 8.32e-19 | 84.0 |
| MsG0180000546.01.T01 | AT1G18030 | 32.338 | 201 | 103 | 8 | 62 | 241 | 110 | 298 | 1.08e-18 | 84.3 |
| MsG0180000546.01.T01 | AT3G51470 | 28.646 | 192 | 105 | 5 | 62 | 241 | 63 | 234 | 4.77e-18 | 82.0 |
| MsG0180000546.01.T01 | AT3G51470 | 29.688 | 192 | 103 | 6 | 62 | 241 | 107 | 278 | 5.68e-18 | 82.4 |
| MsG0180000546.01.T01 | AT5G24940 | 32.292 | 192 | 96 | 9 | 62 | 241 | 65 | 234 | 8.33e-18 | 82.4 |
| MsG0180000546.01.T01 | AT2G33700 | 30.208 | 192 | 102 | 6 | 62 | 241 | 124 | 295 | 8.58e-18 | 82.0 |
| MsG0180000546.01.T01 | AT1G07430 | 31.527 | 203 | 98 | 9 | 62 | 241 | 158 | 342 | 1.98e-17 | 81.3 |
| MsG0180000546.01.T01 | AT1G67820 | 32.828 | 198 | 87 | 9 | 62 | 241 | 116 | 285 | 1.82e-16 | 78.2 |
| MsG0180000546.01.T01 | AT1G67820 | 32.828 | 198 | 87 | 9 | 62 | 241 | 152 | 321 | 1.83e-16 | 78.6 |
| MsG0180000546.01.T01 | AT1G48040 | 28.111 | 217 | 133 | 8 | 37 | 241 | 95 | 300 | 2.23e-16 | 77.8 |
| MsG0180000546.01.T01 | AT3G62260 | 29.648 | 199 | 105 | 7 | 62 | 241 | 28 | 210 | 2.89e-16 | 76.6 |
| MsG0180000546.01.T01 | AT3G62260 | 29.648 | 199 | 105 | 7 | 62 | 241 | 117 | 299 | 8.21e-16 | 76.3 |
| MsG0180000546.01.T01 | AT3G62260 | 29.648 | 199 | 105 | 7 | 62 | 241 | 118 | 300 | 8.49e-16 | 76.3 |
| MsG0180000546.01.T01 | AT2G29380 | 30.846 | 201 | 103 | 10 | 62 | 241 | 113 | 298 | 6.35e-15 | 73.6 |
| MsG0180000546.01.T01 | AT5G53140 | 31.250 | 192 | 98 | 9 | 62 | 241 | 133 | 302 | 2.50e-14 | 72.0 |
| MsG0180000546.01.T01 | AT5G53140 | 31.250 | 192 | 98 | 9 | 62 | 241 | 133 | 302 | 2.50e-14 | 72.0 |
| MsG0180000546.01.T01 | AT5G59220 | 31.000 | 200 | 96 | 9 | 64 | 241 | 151 | 330 | 2.68e-14 | 72.0 |
| MsG0180000546.01.T01 | AT4G26080 | 29.231 | 195 | 106 | 8 | 62 | 241 | 173 | 350 | 5.03e-13 | 68.6 |
| MsG0180000546.01.T01 | AT5G57050 | 29.949 | 197 | 104 | 8 | 62 | 241 | 121 | 300 | 1.09e-12 | 67.4 |
| MsG0180000546.01.T01 | AT5G57050 | 29.949 | 197 | 104 | 8 | 62 | 241 | 161 | 340 | 1.29e-12 | 67.0 |
| MsG0180000546.01.T01 | AT3G12620 | 26.316 | 209 | 121 | 5 | 64 | 241 | 86 | 292 | 1.36e-12 | 67.0 |
| MsG0180000546.01.T01 | AT3G12620 | 26.316 | 209 | 121 | 5 | 64 | 241 | 86 | 292 | 1.36e-12 | 67.0 |
| MsG0180000546.01.T01 | AT4G28400 | 29.412 | 187 | 108 | 7 | 62 | 241 | 68 | 237 | 4.57e-12 | 64.3 |
| MsG0180000546.01.T01 | AT4G28400 | 29.412 | 187 | 108 | 7 | 62 | 241 | 46 | 215 | 5.96e-12 | 64.3 |
| MsG0180000546.01.T01 | AT2G20630 | 27.273 | 187 | 112 | 6 | 62 | 241 | 64 | 233 | 6.50e-12 | 64.3 |
| MsG0180000546.01.T01 | AT2G20630 | 27.273 | 187 | 112 | 6 | 62 | 241 | 64 | 233 | 6.78e-12 | 64.3 |
| MsG0180000546.01.T01 | AT4G28400 | 29.412 | 187 | 108 | 7 | 62 | 241 | 68 | 237 | 8.40e-12 | 63.9 |
| MsG0180000546.01.T01 | AT2G40180 | 29.688 | 192 | 104 | 9 | 62 | 241 | 162 | 334 | 1.22e-11 | 64.3 |
| MsG0180000546.01.T01 | AT3G17250 | 24.490 | 196 | 129 | 5 | 59 | 241 | 155 | 344 | 8.03e-11 | 62.0 |
Find 45 sgRNAs with CRISPR-Local
Find 141 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCATGCAGGACGAATTAA+TGG | 0.284463 | 1:-7659384 | MsG0180000546.01.T01:CDS |
| TTAAATCTTGCAAGAGCTAT+AGG | 0.342994 | 1:-7659357 | MsG0180000546.01.T01:intron |
| TAGATTTGCAAAAGTTGTAT+TGG | 0.366991 | 1:-7661234 | MsG0180000546.01.T01:five_prime_UTR |
| TCCTTCTCAATCACAAGCTC+AGG | 0.383236 | 1:+7659432 | None:intergenic |
| GACTTTGATGGACCAACTTC+AGG | 0.394479 | 1:-7659850 | MsG0180000546.01.T01:CDS |
| TGCCAAGCACCTTCACCAAC+AGG | 0.407215 | 1:-7660378 | MsG0180000546.01.T01:CDS |
| TTGTTGAGAAAGAAACAAAA+AGG | 0.408044 | 1:-7661307 | MsG0180000546.01.T01:five_prime_UTR |
| TGGAGGGAATTAGCAGTCTT+AGG | 0.418225 | 1:-7660095 | MsG0180000546.01.T01:CDS |
| GGGCCTCATTCAGACTTTGA+TGG | 0.437338 | 1:-7659862 | MsG0180000546.01.T01:CDS |
| AAACTTACAATGTTTATGTC+TGG | 0.447995 | 1:+7658980 | None:intergenic |
| TTTAATTCAGATATAGCAAT+GGG | 0.469490 | 1:-7661137 | MsG0180000546.01.T01:CDS |
| CACCTGTTGGTGAAGGTGCT+TGG | 0.474380 | 1:+7660376 | None:intergenic |
| GCCAAATCAATTAACAAAAG+AGG | 0.482517 | 1:+7661260 | None:intergenic |
| ATTAGCAGTCTTAGGTGATA+AGG | 0.484258 | 1:-7660087 | MsG0180000546.01.T01:intron |
| GAATACATAGCTGGAGATGT+TGG | 0.491063 | 1:-7660341 | MsG0180000546.01.T01:CDS |
| TTCATGCAGGACGAATTAAT+GGG | 0.491284 | 1:-7659383 | MsG0180000546.01.T01:CDS |
| TTACAATGTTTATGTCTGGA+TGG | 0.503566 | 1:+7658984 | None:intergenic |
| TGATAGCTTGTGATGGCATA+TGG | 0.507088 | 1:-7658731 | MsG0180000546.01.T01:CDS |
| AAGGAAAGAATCTATAAAGC+TGG | 0.515169 | 1:-7659414 | MsG0180000546.01.T01:CDS |
| AAAGCAGTGCTTCCTGAAGT+TGG | 0.515324 | 1:+7659838 | None:intergenic |
| TGAGATGATGCGTGGTCAAA+GGG | 0.520080 | 1:-7660120 | MsG0180000546.01.T01:CDS |
| GCAAGGTTGGCGTGCAACAA+TGG | 0.523310 | 1:-7661034 | MsG0180000546.01.T01:CDS |
| CAACCATATACAACAAAACA+TGG | 0.525020 | 1:+7661375 | None:intergenic |
| CTTCACTCTTGAGCACCTGT+TGG | 0.527508 | 1:+7660363 | None:intergenic |
| GCGTGGTCAAAGGGGATGGA+GGG | 0.539500 | 1:-7660111 | MsG0180000546.01.T01:CDS |
| TACAATGTTTATGTCTGGAT+GGG | 0.539618 | 1:+7658985 | None:intergenic |
| AAGAGTGAAGAATACATAGC+TGG | 0.546958 | 1:-7660350 | MsG0180000546.01.T01:CDS |
| TCTTGAGCACCTGTTGGTGA+AGG | 0.555714 | 1:+7660369 | None:intergenic |
| GTTTATCATCTATGCAAGGT+TGG | 0.555814 | 1:-7661047 | MsG0180000546.01.T01:CDS |
| TAAACTCATCTTCGTCATGA+AGG | 0.558190 | 1:+7658757 | None:intergenic |
| TGATGCGTGGTCAAAGGGGA+TGG | 0.565060 | 1:-7660115 | MsG0180000546.01.T01:CDS |
| GCTTGTGATGGCATATGGTA+TGG | 0.574494 | 1:-7658726 | MsG0180000546.01.T01:CDS |
| AATGTTTATGTCTGGATGGG+CGG | 0.577884 | 1:+7658988 | None:intergenic |
| TTAATATTCTGCAGGTGACG+TGG | 0.584418 | 1:-7659056 | MsG0180000546.01.T01:intron |
| TGCGTGGTCAAAGGGGATGG+AGG | 0.586051 | 1:-7660112 | MsG0180000546.01.T01:CDS |
| GCATGCGGCGCATCTTGATG+TGG | 0.597024 | 1:-7660551 | MsG0180000546.01.T01:CDS |
| ATGAGATGATGCGTGGTCAA+AGG | 0.604481 | 1:-7660121 | MsG0180000546.01.T01:CDS |
| GGTCCATCAAAGTCTGAATG+AGG | 0.607139 | 1:+7659859 | None:intergenic |
| ACCTGAGCTTGTGATTGAGA+AGG | 0.615530 | 1:-7659433 | MsG0180000546.01.T01:CDS |
| ATATGTTTATCATCTATGCA+AGG | 0.621432 | 1:-7661051 | MsG0180000546.01.T01:CDS |
| GAAAGAATCTATAAAGCTGG+TGG | 0.623293 | 1:-7659411 | MsG0180000546.01.T01:CDS |
| TTTATAGTGATAGCTTGTGA+TGG | 0.644189 | 1:-7658738 | MsG0180000546.01.T01:CDS |
| TCGGTATATGATGGTCATGG+AGG | 0.662530 | 1:-7660510 | MsG0180000546.01.T01:intron |
| GAGATGATGCGTGGTCAAAG+GGG | 0.732571 | 1:-7660119 | MsG0180000546.01.T01:CDS |
| AGAATGGATGAGATGATGCG+TGG | 0.759110 | 1:-7660128 | MsG0180000546.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAATATTAAAACATATTAAA+TGG | + | Chr1:7661156-7661175 | None:intergenic | 10.0% |
| !! | TTTAAAAAAAATAACATAAC+AGG | + | Chr1:7660566-7660585 | None:intergenic | 10.0% |
| !! | AAAAGAATTAAACAAATTCT+AGG | + | Chr1:7660665-7660684 | None:intergenic | 15.0% |
| !! | AGCATACAAAATAAAATAAT+AGG | + | Chr1:7661018-7661037 | None:intergenic | 15.0% |
| !! | TTTAGCATTAATTGTATAAT+TGG | - | Chr1:7660520-7660539 | MsG0180000546.01.T01:CDS | 15.0% |
| !!! | ATCTTTTTATATTGTAAACA+GGG | - | Chr1:7660340-7660359 | MsG0180000546.01.T01:CDS | 15.0% |
| !!! | GATTTTTTTATTACATAGTT+TGG | - | Chr1:7659011-7659030 | MsG0180000546.01.T01:CDS | 15.0% |
| !!! | TTATTTTGTATGCTTTATTT+TGG | - | Chr1:7661024-7661043 | MsG0180000546.01.T01:intron | 15.0% |
| !!! | TTGTTTTTGAATTATATCAT+AGG | - | Chr1:7661439-7661458 | MsG0180000546.01.T01:five_prime_UTR | 15.0% |
| !!! | TTTAATTCTTTTTCTTATGT+AGG | - | Chr1:7660673-7660692 | MsG0180000546.01.T01:intron | 15.0% |
| !! | ATATTGTCTATTGAGAAATA+GGG | + | Chr1:7661290-7661309 | None:intergenic | 20.0% |
| !! | GTAAAATTTGATTATTTGGA+AGG | - | Chr1:7659735-7659754 | MsG0180000546.01.T01:intron | 20.0% |
| !! | TTTAATTCAGATATAGCAAT+GGG | - | Chr1:7659086-7659105 | MsG0180000546.01.T01:intron | 20.0% |
| !!! | AAAGTTAAAAGCATAATTGA+CGG | + | Chr1:7659558-7659577 | None:intergenic | 20.0% |
| !!! | AATATGTTTTAATATTCTGC+AGG | - | Chr1:7661159-7661178 | MsG0180000546.01.T01:exon | 20.0% |
| !!! | AGAGTTTTTGAAAAAATTCA+AGG | + | Chr1:7659381-7659400 | None:intergenic | 20.0% |
| !!! | ATGCTTTTAACTTTGTTTAT+TGG | - | Chr1:7659564-7659583 | MsG0180000546.01.T01:intron | 20.0% |
| !!! | GATCTTTTTATATTGTAAAC+AGG | - | Chr1:7660339-7660358 | MsG0180000546.01.T01:CDS | 20.0% |
| !!! | TATACTTAGTTTCTTTTTGT+TGG | - | Chr1:7660303-7660322 | MsG0180000546.01.T01:intron | 20.0% |
| !!! | TCTTTTTATATTGTAAACAG+GGG | - | Chr1:7660341-7660360 | MsG0180000546.01.T01:CDS | 20.0% |
| !!! | TGAGTTATGAACTATTATTT+TGG | - | Chr1:7660063-7660082 | MsG0180000546.01.T01:intron | 20.0% |
| !!! | TTTTAATTCAGATATAGCAA+TGG | - | Chr1:7659085-7659104 | MsG0180000546.01.T01:intron | 20.0% |
| ! | AAACTTACAATGTTTATGTC+TGG | + | Chr1:7661246-7661265 | None:intergenic | 25.0% |
| ! | AATTTGATTATTTGGAAGGA+TGG | - | Chr1:7659739-7659758 | MsG0180000546.01.T01:intron | 25.0% |
| ! | ATATGTTTATCATCTATGCA+AGG | - | Chr1:7659172-7659191 | MsG0180000546.01.T01:intron | 25.0% |
| ! | CATATTGTCTATTGAGAAAT+AGG | + | Chr1:7661291-7661310 | None:intergenic | 25.0% |
| ! | CTAAGGTTAAAACTGAATAA+AGG | + | Chr1:7660928-7660947 | None:intergenic | 25.0% |
| ! | GAAAAATTTATCACAAGTTC+AGG | - | Chr1:7660011-7660030 | MsG0180000546.01.T01:intron | 25.0% |
| ! | GGAGGTAAAATTTGATTATT+TGG | - | Chr1:7659731-7659750 | MsG0180000546.01.T01:intron | 25.0% |
| ! | TAAAATCAAAACTTCACAAC+AGG | + | Chr1:7659957-7659976 | None:intergenic | 25.0% |
| ! | TAGATTTGCAAAAGTTGTAT+TGG | - | Chr1:7658989-7659008 | MsG0180000546.01.T01:CDS | 25.0% |
| ! | TTGTTGAGAAAGAAACAAAA+AGG | - | Chr1:7658916-7658935 | MsG0180000546.01.T01:intron | 25.0% |
| !! | AGTTTTTGTCAAAATCATGA+TGG | - | Chr1:7659491-7659510 | MsG0180000546.01.T01:intron | 25.0% |
| !! | CTATTTCTCAATAGACAATA+TGG | - | Chr1:7661289-7661308 | MsG0180000546.01.T01:five_prime_UTR | 25.0% |
| !! | TATGTTGAACACAAATTTTC+AGG | - | Chr1:7659801-7659820 | MsG0180000546.01.T01:CDS | 25.0% |
| !! | TCCTCTTTTGTTAATTGATT+TGG | - | Chr1:7658962-7658981 | MsG0180000546.01.T01:intron | 25.0% |
| !! | TCTGAAAACTTTTCAGTTTT+AGG | + | Chr1:7659128-7659147 | None:intergenic | 25.0% |
| !!! | ACTTTTTGTTACTTTCATAG+TGG | + | Chr1:7660044-7660063 | None:intergenic | 25.0% |
| !!! | AGGAAGTTTCCTTTTATTTT+CGG | + | Chr1:7660998-7661017 | None:intergenic | 25.0% |
| !!! | ATTCCATGTTTTGTTGTATA+TGG | - | Chr1:7658845-7658864 | MsG0180000546.01.T01:intron | 25.0% |
| !!! | ATTTTGGTTATTATGCAGAA+TGG | - | Chr1:7660079-7660098 | MsG0180000546.01.T01:intron | 25.0% |
| !!! | GACATAATTTTTTCTGACTA+TGG | - | Chr1:7660726-7660745 | MsG0180000546.01.T01:intron | 25.0% |
| !!! | TTTTGTATGCTTTATTTTGG+AGG | - | Chr1:7661027-7661046 | MsG0180000546.01.T01:CDS | 25.0% |
| AAATGCTTAGTCAAGAGTTT+CGG | - | Chr1:7661326-7661345 | MsG0180000546.01.T01:five_prime_UTR | 30.0% | |
| AAGGAAAGAATCTATAAAGC+TGG | - | Chr1:7660809-7660828 | MsG0180000546.01.T01:intron | 30.0% | |
| ACTAAGATTATCATAGCTCA+AGG | + | Chr1:7660972-7660991 | None:intergenic | 30.0% | |
| ATTGTAGAAGCAAGTATATG+TGG | - | Chr1:7659325-7659344 | MsG0180000546.01.T01:intron | 30.0% | |
| CAACCATATACAACAAAACA+TGG | + | Chr1:7658851-7658870 | None:intergenic | 30.0% | |
| CTTAGTGTACCGAAAATAAA+AGG | - | Chr1:7660986-7661005 | MsG0180000546.01.T01:intron | 30.0% | |
| GCCAAATCAATTAACAAAAG+AGG | + | Chr1:7658966-7658985 | None:intergenic | 30.0% | |
| GGAATGATTGAAGATTGATT+CGG | - | Chr1:7660173-7660192 | MsG0180000546.01.T01:intron | 30.0% | |
| TACAATGTTTATGTCTGGAT+GGG | + | Chr1:7661241-7661260 | None:intergenic | 30.0% | |
| TCCTTATTATCATTGCTTCT+GGG | + | Chr1:7660202-7660221 | None:intergenic | 30.0% | |
| TCTTAGGTGATAAGGTAAAA+GGG | - | Chr1:7660144-7660163 | MsG0180000546.01.T01:intron | 30.0% | |
| TTAAATCTTGCAAGAGCTAT+AGG | - | Chr1:7660866-7660885 | MsG0180000546.01.T01:intron | 30.0% | |
| TTACAATGTTTATGTCTGGA+TGG | + | Chr1:7661242-7661261 | None:intergenic | 30.0% | |
| TTGAAGAAGATGCACTTATA+TGG | - | Chr1:7661118-7661137 | MsG0180000546.01.T01:CDS | 30.0% | |
| ! | ACTGAAAAGTTTTCAGAAGA+TGG | - | Chr1:7659131-7659150 | MsG0180000546.01.T01:intron | 30.0% |
| ! | AGTGTGATTGAATTGTGTTT+TGG | - | Chr1:7659517-7659536 | MsG0180000546.01.T01:intron | 30.0% |
| ! | GTGTGATTGAATTGTGTTTT+GGG | - | Chr1:7659518-7659537 | MsG0180000546.01.T01:intron | 30.0% |
| ! | TTTATAGTGATAGCTTGTGA+TGG | - | Chr1:7661485-7661504 | MsG0180000546.01.T01:five_prime_UTR | 30.0% |
| !! | CATGTTTTGTTGTATATGGT+TGG | - | Chr1:7658849-7658868 | MsG0180000546.01.T01:intron | 30.0% |
| !!! | TGAACACAAATTTTCAGGTA+AGG | - | Chr1:7659806-7659825 | MsG0180000546.01.T01:CDS | 30.0% |
| AAGAGTGAAGAATACATAGC+TGG | - | Chr1:7659873-7659892 | MsG0180000546.01.T01:intron | 35.0% | |
| AAGCTTCAACAGAATCATGA+TGG | + | Chr1:7659463-7659482 | None:intergenic | 35.0% | |
| ATAAGGACCAAAGTGATGAT+TGG | - | Chr1:7660215-7660234 | MsG0180000546.01.T01:intron | 35.0% | |
| ATTAGCAGTCTTAGGTGATA+AGG | - | Chr1:7660136-7660155 | MsG0180000546.01.T01:intron | 35.0% | |
| ATTCATGCAGGACGAATTAA+TGG | - | Chr1:7660839-7660858 | MsG0180000546.01.T01:intron | 35.0% | |
| GAAAGAATCTATAAAGCTGG+TGG | - | Chr1:7660812-7660831 | MsG0180000546.01.T01:intron | 35.0% | |
| GATAAGGTAAAAGGGTTCAA+TGG | - | Chr1:7660152-7660171 | MsG0180000546.01.T01:intron | 35.0% | |
| GTACTTGTATGCATGTTGTT+TGG | - | Chr1:7661061-7661080 | MsG0180000546.01.T01:CDS | 35.0% | |
| GTCCTTATTATCATTGCTTC+TGG | + | Chr1:7660203-7660222 | None:intergenic | 35.0% | |
| GTCTTAGGTGATAAGGTAAA+AGG | - | Chr1:7660143-7660162 | MsG0180000546.01.T01:intron | 35.0% | |
| GTTTATCATCTATGCAAGGT+TGG | - | Chr1:7659176-7659195 | MsG0180000546.01.T01:intron | 35.0% | |
| TAAACTCATCTTCGTCATGA+AGG | + | Chr1:7661469-7661488 | None:intergenic | 35.0% | |
| TAAGGACCAAAGTGATGATT+GGG | - | Chr1:7660216-7660235 | MsG0180000546.01.T01:intron | 35.0% | |
| TCAATTGAAGTTCTTGTGTG+TGG | - | Chr1:7659228-7659247 | MsG0180000546.01.T01:intron | 35.0% | |
| TCATATACCGAAAAACGAAG+TGG | + | Chr1:7659704-7659723 | None:intergenic | 35.0% | |
| TCCCAGAAGCAATGATAATA+AGG | - | Chr1:7660198-7660217 | MsG0180000546.01.T01:intron | 35.0% | |
| TCTTATGTAGGCTATGTGTT+AGG | - | Chr1:7660685-7660704 | MsG0180000546.01.T01:intron | 35.0% | |
| TTCATGCAGGACGAATTAAT+GGG | - | Chr1:7660840-7660859 | MsG0180000546.01.T01:intron | 35.0% | |
| ! | ACTATGGATTTTTGTTCTGC+AGG | - | Chr1:7660742-7660761 | MsG0180000546.01.T01:intron | 35.0% |
| ! | CTTTTTCTTTTGCTAGCATG+CGG | - | Chr1:7659657-7659676 | MsG0180000546.01.T01:intron | 35.0% |
| ! | GATCATTCCTACCTTTTCAA+AGG | + | Chr1:7660242-7660261 | None:intergenic | 35.0% |
| ! | TTTTCGGTATATGATGGTCA+TGG | - | Chr1:7659710-7659729 | MsG0180000546.01.T01:intron | 35.0% |
| !! | CTTCGTTTTTCGGTATATGA+TGG | - | Chr1:7659704-7659723 | MsG0180000546.01.T01:intron | 35.0% |
| !! | GATTCATCCACTTCGTTTTT+CGG | - | Chr1:7659694-7659713 | MsG0180000546.01.T01:intron | 35.0% |
| !! | TTTTAAGTACTTGTCTGCAG+TGG | - | Chr1:7659412-7659431 | MsG0180000546.01.T01:CDS | 35.0% |
| !!! | ACACAAATTTTCAGGTAAGG+CGG | - | Chr1:7659809-7659828 | MsG0180000546.01.T01:CDS | 35.0% |
| !!! | CTCTTACGAAAGCATTTTTC+AGG | - | Chr1:7659910-7659929 | MsG0180000546.01.T01:intron | 35.0% |
| AATAAAGGAAGCTCACTTGC+CGG | + | Chr1:7660913-7660932 | None:intergenic | 40.0% | |
| AATGTTTATGTCTGGATGGG+CGG | + | Chr1:7661238-7661257 | None:intergenic | 40.0% | |
| ATGTAGGCTATGTGTTAGGT+AGG | - | Chr1:7660689-7660708 | MsG0180000546.01.T01:intron | 40.0% | |
| ATTCACGCTGCGTAATATCT+AGG | - | Chr1:7660454-7660473 | MsG0180000546.01.T01:intron | 40.0% | |
| CAGCATTCGCAACAAAAAGT+AGG | + | Chr1:7660431-7660450 | None:intergenic | 40.0% | |
| CATAGTACATACCTACCTAC+CGG | - | Chr1:7660891-7660910 | MsG0180000546.01.T01:intron | 40.0% | |
| CGTAATATCTAGGAATGGTC+AGG | - | Chr1:7660464-7660483 | MsG0180000546.01.T01:intron | 40.0% | |
| GAATACATAGCTGGAGATGT+TGG | - | Chr1:7659882-7659901 | MsG0180000546.01.T01:intron | 40.0% | |
| TTAATATTCTGCAGGTGACG+TGG | - | Chr1:7661167-7661186 | MsG0180000546.01.T01:exon | 40.0% | |
| TTGAAGTTCTTGTGTGTGGA+TGG | - | Chr1:7659232-7659251 | MsG0180000546.01.T01:intron | 40.0% | |
| ! | TAGGGTAATCTGACTTGCAA+TGG | + | Chr1:7661272-7661291 | None:intergenic | 40.0% |
| ! | TGATAGCTTGTGATGGCATA+TGG | - | Chr1:7661492-7661511 | MsG0180000546.01.T01:five_prime_UTR | 40.0% |
| ! | TGATGATTGGGCCTTTGAAA+AGG | - | Chr1:7660228-7660247 | MsG0180000546.01.T01:intron | 40.0% |
| !! | GTGTGTGGATGGATTTTTCT+TGG | - | Chr1:7659243-7659262 | MsG0180000546.01.T01:intron | 40.0% |
| !!! | CTACTTTTTGTTGCGAATGC+TGG | - | Chr1:7660429-7660448 | MsG0180000546.01.T01:intron | 40.0% |
| !!! | TGCTTTATTTTGGAGGCAAG+AGG | - | Chr1:7661034-7661053 | MsG0180000546.01.T01:CDS | 40.0% |
| !!! | TTTATTTTGGAGGCAAGAGG+AGG | - | Chr1:7661037-7661056 | MsG0180000546.01.T01:CDS | 40.0% |
| AAAGCAGTGCTTCCTGAAGT+TGG | + | Chr1:7660388-7660407 | None:intergenic | 45.0% | |
| ACCTGAGCTTGTGATTGAGA+AGG | - | Chr1:7660790-7660809 | MsG0180000546.01.T01:intron | 45.0% | |
| AGAATGGATGAGATGATGCG+TGG | - | Chr1:7660095-7660114 | MsG0180000546.01.T01:CDS | 45.0% | |
| ATGAGATGATGCGTGGTCAA+AGG | - | Chr1:7660102-7660121 | MsG0180000546.01.T01:CDS | 45.0% | |
| CAAAGGCCCAATCATCACTT+TGG | + | Chr1:7660225-7660244 | None:intergenic | 45.0% | |
| CGCTGCGTAATATCTAGGAA+TGG | - | Chr1:7660459-7660478 | MsG0180000546.01.T01:intron | 45.0% | |
| GCTTGTGATGGCATATGGTA+TGG | - | Chr1:7661497-7661516 | MsG0180000546.01.T01:five_prime_UTR | 45.0% | |
| GGTCCATCAAAGTCTGAATG+AGG | + | Chr1:7660367-7660386 | None:intergenic | 45.0% | |
| TAAGTACTTGTCTGCAGTGG+CGG | - | Chr1:7659415-7659434 | MsG0180000546.01.T01:CDS | 45.0% | |
| TCCTTCTCAATCACAAGCTC+AGG | + | Chr1:7660794-7660813 | None:intergenic | 45.0% | |
| TCGGTATATGATGGTCATGG+AGG | - | Chr1:7659713-7659732 | MsG0180000546.01.T01:intron | 45.0% | |
| TGAGATGATGCGTGGTCAAA+GGG | - | Chr1:7660103-7660122 | MsG0180000546.01.T01:CDS | 45.0% | |
| TGCATGTCTCGTGATTTGAG+AGG | - | Chr1:7660609-7660628 | MsG0180000546.01.T01:intron | 45.0% | |
| TGGAGGGAATTAGCAGTCTT+AGG | - | Chr1:7660128-7660147 | MsG0180000546.01.T01:CDS | 45.0% | |
| ! | GACTTTGATGGACCAACTTC+AGG | - | Chr1:7660373-7660392 | MsG0180000546.01.T01:CDS | 45.0% |
| ! | GAGGGGAATGTCACTTACTA+AGG | + | Chr1:7660945-7660964 | None:intergenic | 45.0% |
| ! | GATTGGGCCTTTGAAAAGGT+AGG | - | Chr1:7660232-7660251 | MsG0180000546.01.T01:intron | 45.0% |
| !!! | GCTGGTGGTTTTATTCATGC+AGG | - | Chr1:7660827-7660846 | MsG0180000546.01.T01:intron | 45.0% |
| ATCATAGCTCAAGGCGCAGA+GGG | + | Chr1:7660963-7660982 | None:intergenic | 50.0% | |
| CTTCACTCTTGAGCACCTGT+TGG | + | Chr1:7659863-7659882 | None:intergenic | 50.0% | |
| GAGATGATGCGTGGTCAAAG+GGG | - | Chr1:7660104-7660123 | MsG0180000546.01.T01:CDS | 50.0% | |
| GGGCCTCATTCAGACTTTGA+TGG | - | Chr1:7660361-7660380 | MsG0180000546.01.T01:CDS | 50.0% | |
| TATCATAGCTCAAGGCGCAG+AGG | + | Chr1:7660964-7660983 | None:intergenic | 50.0% | |
| ! | TCTTGAGCACCTGTTGGTGA+AGG | + | Chr1:7659857-7659876 | None:intergenic | 50.0% |
| AAGCTCACTTGCCGGTAGGT+AGG | + | Chr1:7660905-7660924 | None:intergenic | 55.0% | |
| AAGGAAGCTCACTTGCCGGT+AGG | + | Chr1:7660909-7660928 | None:intergenic | 55.0% | |
| GCAAGGTTGGCGTGCAACAA+TGG | - | Chr1:7659189-7659208 | MsG0180000546.01.T01:intron | 55.0% | |
| TCATAGCTCAAGGCGCAGAG+GGG | + | Chr1:7660962-7660981 | None:intergenic | 55.0% | |
| TGATGCGTGGTCAAAGGGGA+TGG | - | Chr1:7660108-7660127 | MsG0180000546.01.T01:CDS | 55.0% | |
| TGCCAAGCACCTTCACCAAC+AGG | - | Chr1:7659845-7659864 | MsG0180000546.01.T01:CDS | 55.0% | |
| !! | CACCTGTTGGTGAAGGTGCT+TGG | + | Chr1:7659850-7659869 | None:intergenic | 55.0% |
| GCATGCGGCGCATCTTGATG+TGG | - | Chr1:7659672-7659691 | MsG0180000546.01.T01:intron | 60.0% | |
| GCGTGGTCAAAGGGGATGGA+GGG | - | Chr1:7660112-7660131 | MsG0180000546.01.T01:CDS | 60.0% | |
| TGCGTGGTCAAAGGGGATGG+AGG | - | Chr1:7660111-7660130 | MsG0180000546.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 7658713 | 7661532 | 7658713 | ID=MsG0180000546.01;Name=MsG0180000546.01 |
| Chr1 | mRNA | 7658713 | 7661532 | 7658713 | ID=MsG0180000546.01.T01;Parent=MsG0180000546.01;Name=MsG0180000546.01.T01;_AED=0.49;_eAED=0.50;_QI=361|0.71|0.62|1|1|1|8|0|246 |
| Chr1 | exon | 7661026 | 7661532 | 7661026 | ID=MsG0180000546.01.T01:exon:2852;Parent=MsG0180000546.01.T01 |
| Chr1 | exon | 7660511 | 7660572 | 7660511 | ID=MsG0180000546.01.T01:exon:2853;Parent=MsG0180000546.01.T01 |
| Chr1 | exon | 7660314 | 7660422 | 7660314 | ID=MsG0180000546.01.T01:exon:2854;Parent=MsG0180000546.01.T01 |
| Chr1 | exon | 7660088 | 7660148 | 7660088 | ID=MsG0180000546.01.T01:exon:2855;Parent=MsG0180000546.01.T01 |
| Chr1 | exon | 7659795 | 7659884 | 7659795 | ID=MsG0180000546.01.T01:exon:2856;Parent=MsG0180000546.01.T01 |
| Chr1 | exon | 7659358 | 7659481 | 7659358 | ID=MsG0180000546.01.T01:exon:2857;Parent=MsG0180000546.01.T01 |
| Chr1 | exon | 7658988 | 7659064 | 7658988 | ID=MsG0180000546.01.T01:exon:2858;Parent=MsG0180000546.01.T01 |
| Chr1 | exon | 7658713 | 7658784 | 7658713 | ID=MsG0180000546.01.T01:exon:2859;Parent=MsG0180000546.01.T01 |
| Chr1 | five_prime_UTR | 7661172 | 7661532 | 7661172 | ID=MsG0180000546.01.T01:five_prime_utr;Parent=MsG0180000546.01.T01 |
| Chr1 | CDS | 7661026 | 7661171 | 7661026 | ID=MsG0180000546.01.T01:cds;Parent=MsG0180000546.01.T01 |
| Chr1 | CDS | 7660511 | 7660572 | 7660511 | ID=MsG0180000546.01.T01:cds;Parent=MsG0180000546.01.T01 |
| Chr1 | CDS | 7660314 | 7660422 | 7660314 | ID=MsG0180000546.01.T01:cds;Parent=MsG0180000546.01.T01 |
| Chr1 | CDS | 7660088 | 7660148 | 7660088 | ID=MsG0180000546.01.T01:cds;Parent=MsG0180000546.01.T01 |
| Chr1 | CDS | 7659795 | 7659884 | 7659795 | ID=MsG0180000546.01.T01:cds;Parent=MsG0180000546.01.T01 |
| Chr1 | CDS | 7659358 | 7659481 | 7659358 | ID=MsG0180000546.01.T01:cds;Parent=MsG0180000546.01.T01 |
| Chr1 | CDS | 7658988 | 7659064 | 7658988 | ID=MsG0180000546.01.T01:cds;Parent=MsG0180000546.01.T01 |
| Chr1 | CDS | 7658713 | 7658784 | 7658713 | ID=MsG0180000546.01.T01:cds;Parent=MsG0180000546.01.T01 |
| Gene Sequence |
| Protein sequence |
