AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280010948.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010948.01.T01 MTR_2g095510 95.564 541 22 1 1 541 1 539 0.0 1053
MsG0280010948.01.T01 MTR_2g095510 94.878 449 21 1 1 449 1 447 0.0 870
MsG0280010948.01.T01 MTR_4g057730 72.192 543 148 2 1 541 1 542 0.0 817
MsG0280010948.01.T01 MTR_4g057730 70.339 472 137 2 1 470 1 471 0.0 693
MsG0280010948.01.T01 MTR_4g057730 69.401 451 135 2 1 449 1 450 0.0 657
MsG0280010948.01.T01 MTR_1g063110 54.597 533 236 5 12 538 13 545 0.0 578
MsG0280010948.01.T01 MTR_1g063120 54.019 535 232 6 12 534 13 545 0.0 566
MsG0280010948.01.T01 MTR_1g026310 44.139 546 296 6 3 541 17 560 6.39e-153 449
MsG0280010948.01.T01 MTR_1g090737 41.530 549 307 7 2 541 23 566 1.48e-144 428
MsG0280010948.01.T01 MTR_8g039720 43.478 552 291 11 4 541 15 559 1.35e-141 420
MsG0280010948.01.T01 MTR_5g007640 43.043 539 289 7 11 539 55 585 4.52e-137 410
MsG0280010948.01.T01 MTR_3g088870 43.077 520 261 10 33 537 55 554 7.27e-135 403
MsG0280010948.01.T01 MTR_5g027480 41.481 540 299 7 10 541 25 555 9.02e-135 402
MsG0280010948.01.T01 MTR_2g105570 41.573 534 297 7 11 533 12 541 3.50e-132 396
MsG0280010948.01.T01 MTR_4g005750 41.917 532 292 8 11 533 11 534 1.49e-130 391
MsG0280010948.01.T01 MTR_3g088880 42.054 516 269 8 33 537 56 552 7.23e-130 390
MsG0280010948.01.T01 MTR_4g128337 41.477 528 300 6 11 533 17 540 4.95e-129 388
MsG0280010948.01.T01 MTR_1g073180 42.692 520 270 9 26 536 29 529 3.28e-127 383
MsG0280010948.01.T01 MTR_5g027500 39.488 547 312 7 10 541 26 568 9.42e-124 375
MsG0280010948.01.T01 MTR_4g077900 40.909 484 271 5 67 541 1 478 9.28e-121 364
MsG0280010948.01.T01 MTR_3g460770 37.002 527 319 8 21 541 22 541 1.23e-117 358
MsG0280010948.01.T01 MTR_1g073180 41.600 500 264 9 26 516 51 531 2.81e-113 347
MsG0280010948.01.T01 MTR_1g026430 37.984 387 231 6 3 382 17 401 1.96e-74 242
MsG0280010948.01.T01 MTR_1g026470 38.205 390 232 6 3 385 17 404 3.06e-74 241
MsG0280010948.01.T01 MTR_3g035130 32.371 485 309 12 55 531 32 505 4.78e-56 196
MsG0280010948.01.T01 MTR_1569s0010 29.567 531 331 11 37 533 6 527 3.47e-55 194
MsG0280010948.01.T01 MTR_5g008820 28.679 530 324 15 42 539 29 536 1.13e-45 169
MsG0280010948.01.T01 MTR_3g064420 28.520 554 334 16 30 539 17 552 1.84e-45 169
MsG0280010948.01.T01 MTR_3g035130 32.118 439 279 12 55 485 32 459 2.77e-45 166
MsG0280010948.01.T01 MTR_2g044180 27.944 569 337 20 21 538 10 556 6.81e-45 167
MsG0280010948.01.T01 MTR_5g008800 28.839 534 320 17 42 539 29 538 1.62e-44 166
MsG0280010948.01.T01 MTR_0803s0020 27.612 536 348 12 12 527 219 734 1.73e-43 166
MsG0280010948.01.T01 MTR_2g044180 29.925 401 237 12 165 538 82 465 1.01e-41 156
MsG0280010948.01.T01 MTR_5g076220 27.684 531 323 17 51 539 36 547 3.89e-40 153
MsG0280010948.01.T01 MTR_5g076240 26.128 532 329 16 41 530 28 537 1.52e-39 152
MsG0280010948.01.T01 MTR_8g074040 26.404 534 335 17 42 539 71 582 2.89e-39 151
MsG0280010948.01.T01 MTR_4g121600 26.667 570 343 21 21 538 10 556 4.93e-38 147
MsG0280010948.01.T01 MTR_2g030240 25.898 529 339 13 56 541 29 547 1.46e-37 146
MsG0280010948.01.T01 MTR_5g076200 27.273 528 327 17 51 538 36 546 7.42e-37 144
MsG0280010948.01.T01 MTR_0161s0050 27.114 402 254 9 160 538 163 548 3.37e-36 142
MsG0280010948.01.T01 MTR_8g074120 26.069 491 307 16 85 539 23 493 1.15e-35 140
MsG0280010948.01.T01 MTR_8g074040 25.625 480 310 14 91 539 1 464 4.79e-32 129
MsG0280010948.01.T01 MTR_4g013210 26.440 382 246 9 181 533 63 438 4.18e-31 125
MsG0280010948.01.T01 MTR_1g104810 30.523 344 185 12 161 458 233 568 8.41e-31 127
MsG0280010948.01.T01 MTR_1g104810 30.523 344 185 12 161 458 166 501 9.64e-31 127
MsG0280010948.01.T01 MTR_4g011790 24.254 536 354 15 36 533 70 591 8.29e-30 124
MsG0280010948.01.T01 MTR_5g023730 26.061 495 325 17 64 530 52 533 1.43e-29 122
MsG0280010948.01.T01 MTR_4g057755 71.233 73 21 0 397 469 46 118 1.64e-29 113
MsG0280010948.01.T01 MTR_4g057755 60.000 60 23 1 221 280 1 59 1.85e-15 73.6
MsG0280010948.01.T01 MTR_7g084850 24.762 525 340 15 54 533 202 716 7.61e-29 121
MsG0280010948.01.T01 MTR_2g030240 26.684 386 238 10 192 541 77 453 1.01e-28 119
MsG0280010948.01.T01 MTR_4g011790 24.105 531 351 15 36 528 70 586 2.32e-28 119
MsG0280010948.01.T01 MTR_4g011790 23.670 545 355 16 36 533 70 600 7.17e-28 118
MsG0280010948.01.T01 MTR_4g013210 26.257 358 229 9 181 509 215 566 6.40e-26 112
MsG0280010948.01.T01 MTR_4g013210 25.269 372 222 11 181 533 63 397 1.41e-25 109
MsG0280010948.01.T01 MTR_4g013210 25.269 372 222 11 181 533 215 549 3.62e-25 109
MsG0280010948.01.T01 MTR_4g068670 24.016 508 282 19 49 470 72 561 1.53e-23 105
MsG0280010948.01.T01 MTR_1g034360 23.800 479 281 17 55 463 79 543 4.58e-23 103
MsG0280010948.01.T01 MTR_7g109830 27.809 356 200 14 164 468 198 547 1.09e-21 99.4
MsG0280010948.01.T01 MTR_5g009360 27.855 359 188 14 163 463 73 418 1.32e-21 98.6
MsG0280010948.01.T01 MTR_1g086600 27.401 354 182 12 188 473 243 589 1.95e-21 98.6
MsG0280010948.01.T01 MTR_5g009350 27.568 370 196 15 161 472 197 552 2.18e-21 98.2
MsG0280010948.01.T01 MTR_5g009350 27.520 367 195 14 161 469 197 550 2.52e-21 98.2
MsG0280010948.01.T01 MTR_5g009360 27.855 359 188 14 163 463 199 544 2.79e-21 98.2
MsG0280010948.01.T01 MTR_5g009350 27.701 361 190 14 161 463 197 544 3.16e-21 97.8
MsG0280010948.01.T01 MTR_5g009350 27.701 361 190 14 161 463 197 544 3.67e-21 97.8
MsG0280010948.01.T01 MTR_8g099420 24.947 473 274 21 56 459 81 541 5.40e-21 97.4
MsG0280010948.01.T01 MTR_1054s0020 24.494 494 337 14 47 528 290 759 3.66e-19 91.7
MsG0280010948.01.T01 MTR_1g026350 38.806 134 79 2 3 135 17 148 4.36e-19 85.1
MsG0280010948.01.T01 MTR_2g098490 25.485 412 227 16 188 536 647 1041 2.13e-17 86.7
MsG0280010948.01.T01 MTR_8g083170 37.162 148 80 3 333 469 478 623 9.69e-17 84.0
MsG0280010948.01.T01 MTR_3g084450 34.091 176 98 6 295 454 224 397 1.55e-16 82.8
MsG0280010948.01.T01 MTR_3g084450 34.091 176 98 6 295 454 432 605 2.01e-16 83.2
MsG0280010948.01.T01 MTR_3g084450 26.667 240 148 8 42 256 92 328 4.04e-11 66.2
MsG0280010948.01.T01 MTR_3g084470 29.902 204 116 5 327 505 462 663 2.09e-16 83.2
MsG0280010948.01.T01 MTR_3g084470 25.652 230 144 6 42 247 90 316 1.30e-12 70.9
MsG0280010948.01.T01 MTR_3g088890 45.312 64 35 0 443 506 10 73 4.89e-15 71.2
MsG0280010948.01.T01 MTR_1g030290 33.721 172 91 9 306 463 421 583 2.56e-14 76.3
MsG0280010948.01.T01 MTR_3g082660 26.260 377 197 19 165 471 260 625 5.35e-14 75.5
MsG0280010948.01.T01 MTR_3g087980 31.579 171 92 9 306 461 419 579 4.50e-13 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280010948.01.T01 AT4G05160 66.972 545 175 2 1 541 1 544 0.0 765
MsG0280010948.01.T01 AT1G20510 44.708 548 280 9 3 539 7 542 5.20e-154 452
MsG0280010948.01.T01 AT1G20500 44.322 546 289 10 3 541 13 550 1.56e-144 427
MsG0280010948.01.T01 AT1G65060 41.243 531 296 5 11 533 34 556 3.07e-138 412
MsG0280010948.01.T01 AT1G20480 41.304 552 303 8 2 541 23 565 1.69e-136 407
MsG0280010948.01.T01 AT3G21240 41.220 541 290 8 8 533 19 546 6.32e-136 405
MsG0280010948.01.T01 AT4G19010 41.132 530 301 6 10 533 30 554 7.01e-136 406
MsG0280010948.01.T01 AT5G63380 42.407 540 284 8 10 533 22 550 2.10e-135 404
MsG0280010948.01.T01 AT5G38120 41.039 558 289 11 3 541 14 550 1.61e-130 392
MsG0280010948.01.T01 AT1G51680 41.198 551 293 8 2 533 15 553 7.16e-130 390
MsG0280010948.01.T01 AT1G20510 43.215 479 249 9 3 470 7 473 6.64e-123 369
MsG0280010948.01.T01 AT3G21230 40.370 540 302 8 9 533 26 560 9.63e-123 372
MsG0280010948.01.T01 AT1G51680 41.109 523 277 8 2 505 15 525 8.10e-120 363
MsG0280010948.01.T01 AT1G62940 39.591 538 305 9 11 539 12 538 3.04e-116 355
MsG0280010948.01.T01 AT5G38120 39.655 522 275 11 3 505 14 514 1.71e-113 347
MsG0280010948.01.T01 AT3G21240 40.710 479 256 8 8 471 19 484 4.90e-112 342
MsG0280010948.01.T01 AT3G21240 40.710 479 256 8 8 471 19 484 4.90e-112 342
MsG0280010948.01.T01 AT3G21230 40.039 512 287 8 9 505 26 532 8.99e-112 343
MsG0280010948.01.T01 AT1G20510 41.575 457 244 9 3 448 7 451 4.63e-109 333
MsG0280010948.01.T01 AT1G51680 40.862 487 257 8 2 469 15 489 2.66e-106 327
MsG0280010948.01.T01 AT1G65060 39.062 448 257 5 11 450 34 473 9.47e-104 321
MsG0280010948.01.T01 AT3G21230 39.706 476 267 8 9 469 26 496 5.35e-100 311
MsG0280010948.01.T01 AT5G38120 38.604 487 259 11 3 470 14 479 3.70e-98 306
MsG0280010948.01.T01 AT5G38120 38.604 487 259 11 3 470 14 479 3.70e-98 306
MsG0280010948.01.T01 AT1G20490 35.981 428 249 12 3 417 13 428 4.20e-77 250
MsG0280010948.01.T01 AT1G20490 35.981 428 249 12 3 417 13 428 4.20e-77 250
MsG0280010948.01.T01 AT3G48990 34.908 487 294 13 55 531 31 504 6.01e-61 209
MsG0280010948.01.T01 AT3G21230 35.468 406 242 8 9 399 26 426 2.50e-60 206
MsG0280010948.01.T01 AT1G65880 27.592 569 345 19 19 538 4 554 3.69e-52 187
MsG0280010948.01.T01 AT1G77240 29.329 566 330 18 19 539 3 543 1.41e-49 179
MsG0280010948.01.T01 AT1G65890 26.903 565 355 17 18 538 3 553 3.39e-49 179
MsG0280010948.01.T01 AT1G66120 27.788 565 345 19 18 539 3 547 2.17e-48 177
MsG0280010948.01.T01 AT1G21540 27.098 572 340 20 19 539 3 548 3.55e-41 156
MsG0280010948.01.T01 AT1G21530 26.795 571 342 23 19 539 3 547 8.09e-41 155
MsG0280010948.01.T01 AT1G21530 27.241 569 340 24 19 539 3 545 1.54e-40 154
MsG0280010948.01.T01 AT1G30520 27.850 535 340 13 39 533 17 545 2.14e-40 154
MsG0280010948.01.T01 AT1G30520 27.850 535 340 13 39 533 17 545 2.14e-40 154
MsG0280010948.01.T01 AT2G17650 25.779 578 351 19 9 537 49 597 4.90e-39 151
MsG0280010948.01.T01 AT1G20560 25.370 540 343 13 42 539 23 544 5.08e-38 147
MsG0280010948.01.T01 AT1G68270 25.683 549 326 17 26 533 11 518 7.76e-38 146
MsG0280010948.01.T01 AT3G16910 27.671 571 337 23 21 538 12 559 1.12e-37 146
MsG0280010948.01.T01 AT5G16370 25.141 533 326 19 51 536 37 543 1.26e-36 143
MsG0280010948.01.T01 AT1G76290 26.190 504 342 13 56 538 41 535 2.12e-36 142
MsG0280010948.01.T01 AT5G16340 26.667 525 329 19 51 538 37 542 8.71e-36 141
MsG0280010948.01.T01 AT1G75960 25.191 524 340 16 51 539 37 543 7.75e-35 138
MsG0280010948.01.T01 AT3G16170 24.549 554 339 18 34 533 72 600 1.30e-32 132
MsG0280010948.01.T01 AT1G20560 26.263 396 252 10 166 539 89 466 1.65e-31 127
MsG0280010948.01.T01 AT1G30520 26.932 453 296 11 39 465 17 460 4.46e-31 126
MsG0280010948.01.T01 AT1G30520 26.932 453 296 11 39 465 17 460 4.46e-31 126
MsG0280010948.01.T01 AT1G64400 25.185 540 307 23 11 469 27 550 1.01e-28 121
MsG0280010948.01.T01 AT5G36880 23.619 525 346 13 54 533 197 711 1.95e-27 117
MsG0280010948.01.T01 AT5G36880 23.619 525 346 13 54 533 147 661 2.34e-27 117
MsG0280010948.01.T01 AT5G36880 23.619 525 346 13 54 533 147 661 2.34e-27 117
MsG0280010948.01.T01 AT5G36880 23.619 525 346 13 54 533 147 661 2.34e-27 117
MsG0280010948.01.T01 AT5G36880 23.619 525 346 13 54 533 147 661 2.34e-27 117
MsG0280010948.01.T01 AT5G27600 30.061 326 159 12 185 456 259 569 4.16e-27 116
MsG0280010948.01.T01 AT3G05970 30.599 317 169 10 185 456 259 569 1.37e-26 114
MsG0280010948.01.T01 AT1G49430 27.857 420 217 20 159 505 196 602 5.60e-25 109
MsG0280010948.01.T01 AT2G47240 28.889 360 173 14 185 473 159 506 2.02e-21 98.6
MsG0280010948.01.T01 AT4G23850 25.420 476 262 22 56 456 81 538 2.19e-21 98.6
MsG0280010948.01.T01 AT2G47240 28.889 360 173 14 185 473 218 565 2.59e-21 98.2
MsG0280010948.01.T01 AT2G47240 28.889 360 173 14 185 473 218 565 2.59e-21 98.2
MsG0280010948.01.T01 AT2G47240 28.889 360 173 14 185 473 218 565 2.59e-21 98.2
MsG0280010948.01.T01 AT5G36880 23.144 458 300 12 54 469 147 594 8.24e-21 96.7
MsG0280010948.01.T01 AT4G11030 24.597 496 266 23 56 469 81 550 3.42e-19 91.7
MsG0280010948.01.T01 AT3G23790 29.918 244 134 7 333 541 476 717 7.19e-17 84.7
MsG0280010948.01.T01 AT4G14070 41.935 93 52 1 332 424 491 581 4.19e-15 79.0
MsG0280010948.01.T01 AT1G77590 34.270 178 92 9 306 468 271 438 6.63e-15 77.8
MsG0280010948.01.T01 AT1G77590 34.270 178 92 9 306 468 417 584 8.34e-15 77.8
MsG0280010948.01.T01 AT5G35930 22.973 592 330 18 22 528 9 559 1.18e-11 68.2
MsG0280010948.01.T01 AT2G04350 33.136 169 88 8 306 459 446 604 7.50e-11 65.5
MsG0280010948.01.T01 AT2G04350 33.136 169 88 8 306 459 446 604 7.50e-11 65.5

Find 134 sgRNAs with CRISPR-Local

Find 339 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATTTCTAATCACAGTTTA+AGG 0.113834 2:-77503215 MsG0280010948.01.T01:three_prime_UTR
AGATGTGTGATCTTATATTT+TGG 0.176764 2:+77503241 None:intergenic
TATCACAGAACTTATTAAAA+TGG 0.186141 2:+77503178 None:intergenic
TCATCACCGTCGCTGAATTA+TGG 0.186314 2:-77507440 MsG0280010948.01.T01:CDS
ATGTATCCACACTGACAATT+TGG 0.200918 2:+77505323 None:intergenic
TGAAAACGATTGAGAAGTTT+AGG 0.214454 2:-77507017 MsG0280010948.01.T01:CDS
CCTGATCAGCAATAAACTTT+TGG 0.224031 2:+77503608 None:intergenic
CTTTCGAGTTTGAAGTATAT+TGG 0.293188 2:-77506922 MsG0280010948.01.T01:CDS
CTACCAATGTTTCATGTGTT+TGG 0.312882 2:-77507120 MsG0280010948.01.T01:CDS
TTCCTCAGTTAGTGAGCTAT+TGG 0.319014 2:+77503636 None:intergenic
GTAATTTCTCATAAACTTGT+AGG 0.320844 2:+77502933 None:intergenic
CTAGACAGCTCGGGGAGATA+TGG 0.321010 2:-77505285 MsG0280010948.01.T01:CDS
AAAGAACTGATCAAGTATAA+AGG 0.321343 2:-77504217 MsG0280010948.01.T01:CDS
ACAACAGCATCAAGTATTTC+AGG 0.321945 2:+77503819 None:intergenic
TGCTCTAGCGAAACATGATT+TGG 0.328357 2:-77506959 MsG0280010948.01.T01:CDS
TCCTCTTGGGAAAGAGTTAA+TGG 0.329219 2:-77506887 MsG0280010948.01.T01:CDS
GCGACGGTGATGATGAGTTT+TGG 0.331984 2:+77507450 None:intergenic
ACCTCACCTGCTTCGGCATC+AGG 0.333660 2:+77503685 None:intergenic
GAAAACGATTGAGAAGTTTA+GGG 0.334786 2:-77507016 MsG0280010948.01.T01:CDS
GGTTCTGGTGCTGCTCCTCT+TGG 0.335470 2:-77506901 MsG0280010948.01.T01:CDS
CCAAAAGTTTATTGCTGATC+AGG 0.338270 2:-77503608 MsG0280010948.01.T01:intron
AGTTTGAAGTATATTGGTTC+TGG 0.349564 2:-77506916 MsG0280010948.01.T01:CDS
TTCTAGTGCTTTGGTGATGA+TGG 0.362275 2:+77507922 None:intergenic
CATCACCGTCGCTGAATTAT+GGG 0.362623 2:-77507439 MsG0280010948.01.T01:CDS
TATTTCTAATCACAGTTTAA+GGG 0.369755 2:-77503214 MsG0280010948.01.T01:three_prime_UTR
TCAGCTGGAATGCTTGTTGC+GGG 0.370899 2:-77505355 MsG0280010948.01.T01:CDS
TCCTCGTGCTGTCGTTTCTC+AGG 0.371491 2:-77506845 MsG0280010948.01.T01:intron
GCTCACTCTTTAATTAAAAT+CGG 0.372999 2:-77507627 MsG0280010948.01.T01:CDS
CAGCTGAAGCAATGAAATTC+TGG 0.373067 2:+77507202 None:intergenic
AGATTGACTATAGATGAAAA+AGG 0.379150 2:-77504307 MsG0280010948.01.T01:CDS
AGTGTACCTGGCATCATATT+AGG 0.380108 2:+77505253 None:intergenic
ACGGGGTAAAGATAACTATT+AGG 0.381279 2:+77507570 None:intergenic
TGTATCCACACTGACAATTT+GGG 0.391546 2:+77505324 None:intergenic
ATCACAGAACTTATTAAAAT+GGG 0.393229 2:+77503179 None:intergenic
TGAACAATCTCATGATTTAG+TGG 0.398261 2:-77502988 MsG0280010948.01.T01:three_prime_UTR
TGCCGAAGCAGGTGAGGTTC+CGG 0.410955 2:-77503680 MsG0280010948.01.T01:CDS
TAAGATAAGGGAAGGTCTTA+AGG 0.414651 2:+77507788 None:intergenic
TGGGTACATACGGGAGATCT+TGG 0.418949 2:-77504283 MsG0280010948.01.T01:CDS
TGGAGAAACTTCTGAACGTT+TGG 0.421682 2:-77507359 MsG0280010948.01.T01:CDS
AAGAACTGATCAAGTATAAA+GGG 0.421932 2:-77504216 MsG0280010948.01.T01:CDS
GATCAAGTATAAAGGGTTCC+AGG 0.425142 2:-77504209 MsG0280010948.01.T01:intron
TGTGTGACAAGAGAAATATT+TGG 0.435507 2:+77507756 None:intergenic
CAATTCCTCCGGCGCGACGC+TGG 0.441443 2:-77507379 MsG0280010948.01.T01:CDS
ACGCAAATTGTAAATCGTAT+AGG 0.445265 2:-77503153 MsG0280010948.01.T01:three_prime_UTR
AGAATACAAGGATGGGGATT+CGG 0.446751 2:-77505387 MsG0280010948.01.T01:CDS
ATGGTATGACTGAGACTTGT+GGG 0.450889 2:-77505423 MsG0280010948.01.T01:CDS
GTTCTGGTGCTGCTCCTCTT+GGG 0.452416 2:-77506900 MsG0280010948.01.T01:CDS
TCCTCAGTTAGTGAGCTATT+GGG 0.453285 2:+77503637 None:intergenic
AGGATGGGGATTCGGCATAC+TGG 0.454599 2:-77505379 MsG0280010948.01.T01:CDS
AACCGGAACCTCACCTGCTT+CGG 0.456612 2:+77503678 None:intergenic
CATATCTCCCCGAGCTGTCT+AGG 0.463547 2:+77505286 None:intergenic
TAGACAGCTCGGGGAGATAT+GGG 0.463949 2:-77505284 MsG0280010948.01.T01:CDS
ATTCGGCATACTGGCTCAGC+TGG 0.466035 2:-77505370 MsG0280010948.01.T01:CDS
AGTTTAGGGTTACGAGATTG+TGG 0.469668 2:-77507002 MsG0280010948.01.T01:CDS
GCTCGGGGAGATATGGGTGC+GGG 0.475710 2:-77505278 MsG0280010948.01.T01:CDS
CACTCCCTCCTAGACAGCTC+GGG 0.476869 2:-77505294 MsG0280010948.01.T01:CDS
TCGTGTGGTGAAGAAAACTA+TGG 0.479974 2:-77503043 MsG0280010948.01.T01:three_prime_UTR
GCAACGGCGAGGAAGAAAAC+GGG 0.492038 2:+77507552 None:intergenic
TTCCTCGCCGTTGCTTCCAT+CGG 0.494451 2:-77507543 MsG0280010948.01.T01:CDS
TTTGCTTACACCGGTGGTAC+CGG 0.494963 2:+77507242 None:intergenic
TTGTATTCCTCCGGTACCAC+CGG 0.499052 2:-77507252 MsG0280010948.01.T01:CDS
TTGTTTCTGTGGAGAATACA+AGG 0.499242 2:-77505399 MsG0280010948.01.T01:CDS
GTTGCACCAGCAGAACTTGA+AGG 0.500327 2:-77503858 MsG0280010948.01.T01:CDS
TTCGAATCGTTTGTGAAACT+CGG 0.502542 2:-77507333 MsG0280010948.01.T01:CDS
AGAAGACCTTCAAGTTCTGC+TGG 0.504296 2:+77503852 None:intergenic
GACTTGTGGGATTGTTTCTG+TGG 0.504633 2:-77505410 MsG0280010948.01.T01:CDS
ACTTGATCAGTTCTTTGATA+CGG 0.510699 2:+77504224 None:intergenic
AGATTTCCTGATGCCGAAGC+AGG 0.514618 2:-77503691 MsG0280010948.01.T01:CDS
ACTTCGACGGTGGTGTATTG+TGG 0.515982 2:+77507498 None:intergenic
TTCATCTATAGTCAATCTTG+TGG 0.516407 2:+77504312 None:intergenic
GTTCGCACAACATAGGCAAC+CGG 0.516709 2:+77503661 None:intergenic
AGCAACGGCGAGGAAGAAAA+CGG 0.517114 2:+77507551 None:intergenic
CTCAGCTGGAATGCTTGTTG+CGG 0.519184 2:-77505356 MsG0280010948.01.T01:CDS
AGTGAGCGAGTTTAATCGTA+AGG 0.520878 2:+77507643 None:intergenic
GGTGGAAGCGACGGCGCCGA+TGG 0.522303 2:+77507527 None:intergenic
TTCGCTAGAGCAAGTACAAT+CGG 0.523983 2:+77506970 None:intergenic
TGGAATGCTTGTTGCGGGTG+TGG 0.534418 2:-77505350 MsG0280010948.01.T01:CDS
CCACTCCCTCCTAGACAGCT+CGG 0.534919 2:-77505295 MsG0280010948.01.T01:CDS
TTCTGTGGAGAATACAAGGA+TGG 0.535427 2:-77505395 MsG0280010948.01.T01:CDS
CCGAGCTGTCTAGGAGGGAG+TGG 0.540030 2:+77505295 None:intergenic
CCAATGCAGAGATCAGGTTA+CGG 0.544528 2:-77507831 MsG0280010948.01.T01:CDS
AGATCAGGTTACGGTTCAGA+TGG 0.546623 2:-77507822 MsG0280010948.01.T01:CDS
CACTCCTTTGCTTACACCGG+TGG 0.547251 2:+77507236 None:intergenic
CGGGGTCCTAATATGATGCC+AGG 0.552464 2:-77505259 MsG0280010948.01.T01:intron
AAGTTTCTCCAGCGTCGCGC+CGG 0.555656 2:+77507371 None:intergenic
CCGTAACCTGATCTCTGCAT+TGG 0.555666 2:+77507831 None:intergenic
TTTAAAATTTGATCTTGTCG+TGG 0.555793 2:-77503015 MsG0280010948.01.T01:three_prime_UTR
TCCTGATGCCGAAGCAGGTG+AGG 0.558255 2:-77503686 MsG0280010948.01.T01:CDS
GACGGCGCCGATGGAAGCAA+CGG 0.565202 2:+77507536 None:intergenic
GCGGCGTTGTTGTATTCCTC+CGG 0.565347 2:-77507261 MsG0280010948.01.T01:CDS
AGCTCGGGGAGATATGGGTG+CGG 0.566110 2:-77505279 MsG0280010948.01.T01:CDS
AAGAAGCGACTTTGTTGAAG+AGG 0.566235 2:+77507733 None:intergenic
ATTGGGTGTTCGCACAACAT+AGG 0.567712 2:+77503654 None:intergenic
TCTGTGGAGAATACAAGGAT+GGG 0.570060 2:-77505394 MsG0280010948.01.T01:CDS
ATAGTCAATCTTGTGGCCTG+TGG 0.570442 2:+77504319 None:intergenic
CTGTGGAGAATACAAGGATG+GGG 0.571234 2:-77505393 MsG0280010948.01.T01:CDS
TCCATTAACTCTTTCCCAAG+AGG 0.573288 2:+77506886 None:intergenic
TTTCTCCAGCGTCGCGCCGG+AGG 0.573475 2:+77507374 None:intergenic
ATGCGATTGTTTCGTTGAAG+CGG 0.575507 2:-77507059 MsG0280010948.01.T01:CDS
TGACGTGAAACAAACTGATA+CGG 0.575717 2:-77507283 MsG0280010948.01.T01:CDS
GAAGCGGTTTGAGTTTGAAG+TGG 0.579767 2:-77507043 MsG0280010948.01.T01:CDS
GTTTCATGTGTTTGGACTAG+CGG 0.581147 2:-77507112 MsG0280010948.01.T01:CDS
TGGATTGACGGTGGAAGCGA+CGG 0.581236 2:+77507518 None:intergenic
AATCACTCCTTTGCTTACAC+CGG 0.589417 2:+77507233 None:intergenic
ATCTCCCCGAGCTGTCTAGG+AGG 0.595576 2:+77505289 None:intergenic
AGGTTATTACAACAATCCAC+AGG 0.599443 2:-77504335 MsG0280010948.01.T01:CDS
TTGTTTAGAAACTTCGACGG+TGG 0.600690 2:+77507488 None:intergenic
TTCAGCTGCAATGATTTCGA+TGG 0.603348 2:-77507187 MsG0280010948.01.T01:CDS
CGCCGATGGAAGCAACGGCG+AGG 0.605721 2:+77507541 None:intergenic
CTCGGGGAGATATGGGTGCG+GGG 0.613042 2:-77505277 MsG0280010948.01.T01:CDS
AGCTTGTTTAGAAACTTCGA+CGG 0.615609 2:+77507485 None:intergenic
ACCTGAGAAACGACAGCACG+AGG 0.616410 2:+77506844 None:intergenic
CGTATTCGCAGCTTCAGAGA+GGG 0.620317 2:-77507083 MsG0280010948.01.T01:CDS
GTGAGCGAGTTTAATCGTAA+GGG 0.621727 2:+77507644 None:intergenic
TCTCCCCGAGCTGTCTAGGA+GGG 0.622596 2:+77505290 None:intergenic
ACTCCCTCCTAGACAGCTCG+GGG 0.623209 2:-77505293 MsG0280010948.01.T01:CDS
GGTACCACCGGTGTAAGCAA+AGG 0.628661 2:-77507240 MsG0280010948.01.T01:CDS
GCTTACACCGGTGGTACCGG+AGG 0.631930 2:+77507245 None:intergenic
AGTCCAAACACATGAAACAT+TGG 0.635655 2:+77507117 None:intergenic
GGTGGTGTATTGTGGATTGA+CGG 0.637291 2:+77507506 None:intergenic
AAAGATAACTATTAGGAGCG+AGG 0.642494 2:+77507577 None:intergenic
CGTGAAACAAACTGATACGG+CGG 0.646125 2:-77507280 MsG0280010948.01.T01:CDS
TTTCTCCCATAATTCAGCGA+CGG 0.647871 2:+77507434 None:intergenic
CAACGGCGAGGAAGAAAACG+GGG 0.660073 2:+77507553 None:intergenic
TATGGTATGACTGAGACTTG+TGG 0.660358 2:-77505424 MsG0280010948.01.T01:CDS
ACCCAATAGCTCACTAACTG+AGG 0.660623 2:-77503638 MsG0280010948.01.T01:CDS
CAGAAGTTTGGACCACTGTG+TGG 0.673421 2:-77503118 MsG0280010948.01.T01:three_prime_UTR
ACGTATTCGCAGCTTCAGAG+AGG 0.698182 2:-77507084 MsG0280010948.01.T01:CDS
AGAATCAGCATCTATAAGAG+CGG 0.699033 2:+77507698 None:intergenic
GGAAGCCCAAATTGTCAGTG+TGG 0.706017 2:-77505329 MsG0280010948.01.T01:CDS
GGTGTATTGTGGATTGACGG+TGG 0.708296 2:+77507509 None:intergenic
TCGATGGATGATGAATTGAA+CGG 0.716846 2:-77507171 MsG0280010948.01.T01:CDS
GCTAGAGCAAGTACAATCGG+TGG 0.722339 2:+77506973 None:intergenic
AAATTTGAATGACACTCGTG+TGG 0.749428 2:-77503058 MsG0280010948.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAATTAAAGTTGTAT+TGG - Chr2:77504889-77504908 MsG0280010948.01.T01:intron 10.0%
!! AAATAGAATGAAATAATCAT+TGG - Chr2:77504763-77504782 MsG0280010948.01.T01:intron 15.0%
!!! AATTTTAAATTTTACCTAAC+TGG + Chr2:77507361-77507380 None:intergenic 15.0%
!!! AGTTAGGTAAAATTTAAAAT+TGG - Chr2:77507360-77507379 MsG0280010948.01.T01:CDS 15.0%
!!! ATTTTAAATTTTACCTAACT+GGG + Chr2:77507360-77507379 None:intergenic 15.0%
!! AAAAAAATATTGTGTGTCTT+TGG - Chr2:77505306-77505325 MsG0280010948.01.T01:CDS 20.0%
!! ACTATATATGAAGTAAAGAA+AGG + Chr2:77506439-77506458 None:intergenic 20.0%
!! ACTTTAAACTGTTTATAGTA+TGG - Chr2:77506405-77506424 MsG0280010948.01.T01:intron 20.0%
!! ATATTCCATTCCAATATTAT+AGG + Chr2:77504690-77504709 None:intergenic 20.0%
!! ATCACAGAACTTATTAAAAT+GGG + Chr2:77507687-77507706 None:intergenic 20.0%
!! TAAAATGGAACGATAATTTA+GGG + Chr2:77507085-77507104 None:intergenic 20.0%
!! TAAACTCATATGACAAAAAA+AGG + Chr2:77504408-77504427 None:intergenic 20.0%
!! TATAATAAAAAGCAGAAGTT+TGG - Chr2:77507733-77507752 MsG0280010948.01.T01:CDS 20.0%
!! TATCACAGAACTTATTAAAA+TGG + Chr2:77507688-77507707 None:intergenic 20.0%
!! TGTTAAAAAAACTTATGACA+TGG + Chr2:77505043-77505062 None:intergenic 20.0%
!!! AAACAGTTTTCCTATAATAT+TGG - Chr2:77504677-77504696 MsG0280010948.01.T01:intron 20.0%
!!! ACTATAAACAGTTTAAAGTA+TGG + Chr2:77506404-77506423 None:intergenic 20.0%
!!! AGAAATGTTAAGAGTTTTAT+TGG - Chr2:77505894-77505913 MsG0280010948.01.T01:intron 20.0%
!!! AGAGAAATATTTGGATTTTT+CGG + Chr2:77503101-77503120 None:intergenic 20.0%
!!! AGTCAATTTGTTTGAAATTA+AGG + Chr2:77504469-77504488 None:intergenic 20.0%
!!! CTATAAACAGTTTAAAGTAT+GGG + Chr2:77506403-77506422 None:intergenic 20.0%
!!! CTTTTTTGAAAATCACTTTT+TGG + Chr2:77503005-77503024 None:intergenic 20.0%
!!! GTCAATTTGTTTGAAATTAA+GGG + Chr2:77504468-77504487 None:intergenic 20.0%
!!! GTCTTTTTCTTATAAAGTAA+GGG + Chr2:77504811-77504830 None:intergenic 20.0%
!!! TAGTTTTTGTGTCTAAATTT+CGG - Chr2:77504069-77504088 MsG0280010948.01.T01:intron 20.0%
!!! TATTTCTAATCACAGTTTAA+GGG - Chr2:77507649-77507668 MsG0280010948.01.T01:CDS 20.0%
!!! TGTCTTTTTCTTATAAAGTA+AGG + Chr2:77504812-77504831 None:intergenic 20.0%
! AAAATGGAACGATAATTTAG+GGG + Chr2:77507084-77507103 None:intergenic 25.0%
! AAAGAACTGATCAAGTATAA+AGG - Chr2:77506646-77506665 MsG0280010948.01.T01:intron 25.0%
! AAGAACTGATCAAGTATAAA+GGG - Chr2:77506647-77506666 MsG0280010948.01.T01:intron 25.0%
! AGATTGACTATAGATGAAAA+AGG - Chr2:77506556-77506575 MsG0280010948.01.T01:intron 25.0%
! AGTATATTAATAAGCTATCC+TGG - Chr2:77504982-77505001 MsG0280010948.01.T01:intron 25.0%
! ATGACAAAAAAAGGCTTATT+TGG + Chr2:77504399-77504418 None:intergenic 25.0%
! GATTGACTATAGATGAAAAA+GGG - Chr2:77506557-77506576 MsG0280010948.01.T01:intron 25.0%
! GCTCACTCTTTAATTAAAAT+CGG - Chr2:77503236-77503255 MsG0280010948.01.T01:exon 25.0%
! GGATTAATGTTAAGCTAAAA+AGG + Chr2:77507405-77507424 None:intergenic 25.0%
! GTAAAATGGAACGATAATTT+AGG + Chr2:77507086-77507105 None:intergenic 25.0%
! TAAGCTATAAACTGAAAATC+TGG - Chr2:77504428-77504447 MsG0280010948.01.T01:intron 25.0%
! TGTAATTGCTTATGAATAAG+TGG - Chr2:77504540-77504559 MsG0280010948.01.T01:intron 25.0%
! TTAACATTTCTGTCAAAAGA+GGG + Chr2:77505885-77505904 None:intergenic 25.0%
! TTATGTTTGTATTTGTTTGC+AGG - Chr2:77507497-77507516 MsG0280010948.01.T01:CDS 25.0%
! TTCATCTATCATCATTGAAA+TGG + Chr2:77506695-77506714 None:intergenic 25.0%
! TTTCTGTTTGAAGAAGATAA+AGG - Chr2:77506300-77506319 MsG0280010948.01.T01:intron 25.0%
!! ACTGGAATAATATTTTACTC+TGG - Chr2:77505743-77505762 MsG0280010948.01.T01:intron 25.0%
!! AGATGTGTGATCTTATATTT+TGG + Chr2:77507625-77507644 None:intergenic 25.0%
!! AGCTTATAGCTAATTTTTAC+TGG + Chr2:77504358-77504377 None:intergenic 25.0%
!! GAACTAATACGTAATTTTTC+AGG - Chr2:77506508-77506527 MsG0280010948.01.T01:intron 25.0%
!! GTTTTCCTATAATATTGGAA+TGG - Chr2:77504682-77504701 MsG0280010948.01.T01:intron 25.0%
!! TAATTGAACTTGTAGTGTTT+TGG - Chr2:77504185-77504204 MsG0280010948.01.T01:intron 25.0%
!! TTTAAAATTTGATCTTGTCG+TGG - Chr2:77507848-77507867 MsG0280010948.01.T01:exon 25.0%
!! TTTGAAATTAAGGGATTGTT+TGG + Chr2:77504459-77504478 None:intergenic 25.0%
!!! ATTACTTGTTTGACTTGTTT+TGG - Chr2:77505836-77505855 MsG0280010948.01.T01:intron 25.0%
!!! CTATTTCTAATCACAGTTTA+AGG - Chr2:77507648-77507667 MsG0280010948.01.T01:CDS 25.0%
!!! GACAAGATCAAATTTTAAAG+TGG + Chr2:77507847-77507866 None:intergenic 25.0%
!!! TATTAAAATGGGCTTTTTAG+TGG + Chr2:77507676-77507695 None:intergenic 25.0%
!!! TATTTTGTTTATAACCCTTG+TGG - Chr2:77506897-77506916 MsG0280010948.01.T01:CDS 25.0%
!!! TGAGATATTTTGATTATGAC+AGG - Chr2:77505361-77505380 MsG0280010948.01.T01:CDS 25.0%
!!! TTACTTGTTTGACTTGTTTT+GGG - Chr2:77505837-77505856 MsG0280010948.01.T01:intron 25.0%
!!! TTGGTTTTGAGTTTTGTTTT+TGG + Chr2:77502986-77503005 None:intergenic 25.0%
!!! TTTTTTCAAGTAAGATGACA+AGG - Chr2:77504268-77504287 MsG0280010948.01.T01:CDS 25.0%
AAATTGACTAAAGTCGTGTT+TGG - Chr2:77504480-77504499 MsG0280010948.01.T01:intron 30.0%
AAATTGTGTGAGAGAAAAGT+TGG - Chr2:77504850-77504869 MsG0280010948.01.T01:intron 30.0%
ACGCAAATTGTAAATCGTAT+AGG - Chr2:77507710-77507729 MsG0280010948.01.T01:CDS 30.0%
ACTAAGCTAAAAACAGCTTA+TGG - Chr2:77505017-77505036 MsG0280010948.01.T01:intron 30.0%
ACTTGATCAGTTCTTTGATA+CGG + Chr2:77506642-77506661 None:intergenic 30.0%
ATTGCTTATGAATAAGTGGA+AGG - Chr2:77504544-77504563 MsG0280010948.01.T01:intron 30.0%
CAGGTTTAATGTGATATTCT+GGG - Chr2:77506768-77506787 MsG0280010948.01.T01:intron 30.0%
CATTGCATGATTTAAGAGAA+TGG + Chr2:77504045-77504064 None:intergenic 30.0%
CTACATCAGTGATACTATTT+GGG + Chr2:77505072-77505091 None:intergenic 30.0%
CTAGGGAATTCAATTATCAT+TGG + Chr2:77505704-77505723 None:intergenic 30.0%
CTTAACATTTCTGTCAAAAG+AGG + Chr2:77505886-77505905 None:intergenic 30.0%
GAAAACGATTGAGAAGTTTA+GGG - Chr2:77503847-77503866 MsG0280010948.01.T01:CDS 30.0%
GAAATTTCCTCCATATGAAT+AGG - Chr2:77505653-77505672 MsG0280010948.01.T01:intron 30.0%
GAATCAGCTATGAACAAAAT+CGG + Chr2:77505779-77505798 None:intergenic 30.0%
GAGATTTCTTATGTGATGTA+TGG - Chr2:77506348-77506367 MsG0280010948.01.T01:intron 30.0%
GGAAATTGCTTATGAATAAG+TGG - Chr2:77504561-77504580 MsG0280010948.01.T01:intron 30.0%
TACAATTTGAGAAGCTCAAT+TGG - Chr2:77505130-77505149 MsG0280010948.01.T01:intron 30.0%
TCAGGTTTAATGTGATATTC+TGG - Chr2:77506767-77506786 MsG0280010948.01.T01:intron 30.0%
TCTACATCAGTGATACTATT+TGG + Chr2:77505073-77505092 None:intergenic 30.0%
TGAAAACGATTGAGAAGTTT+AGG - Chr2:77503846-77503865 MsG0280010948.01.T01:CDS 30.0%
TGAACAATCTCATGATTTAG+TGG - Chr2:77507875-77507894 MsG0280010948.01.T01:five_prime_UTR 30.0%
TGTCTAAATTTCGGTGATTA+AGG - Chr2:77504078-77504097 MsG0280010948.01.T01:intron 30.0%
TGTGTGACAAGAGAAATATT+TGG + Chr2:77503110-77503129 None:intergenic 30.0%
TTCATCAAGTATAACCACAA+GGG + Chr2:77506914-77506933 None:intergenic 30.0%
TTCATCTATAGTCAATCTTG+TGG + Chr2:77506554-77506573 None:intergenic 30.0%
! AACTGTTTGACTTCTTTATC+TGG + Chr2:77504665-77504684 None:intergenic 30.0%
! CTACTTATCCATGATTTTTG+TGG - Chr2:77505407-77505426 MsG0280010948.01.T01:CDS 30.0%
! GTTTGTTTCACGTCAATTTT+TGG + Chr2:77503575-77503594 None:intergenic 30.0%
!! AGTTTGAAGTATATTGGTTC+TGG - Chr2:77503947-77503966 MsG0280010948.01.T01:intron 30.0%
!! ATATTGTGTGTCTTTGGTTT+TGG - Chr2:77505312-77505331 MsG0280010948.01.T01:CDS 30.0%
!! CACGTCAATTTTTGGAAATT+CGG + Chr2:77503567-77503586 None:intergenic 30.0%
!! CTTTCGAGTTTGAAGTATAT+TGG - Chr2:77503941-77503960 MsG0280010948.01.T01:intron 30.0%
!! GATAAAGGCTTTGTTATTAC+CGG - Chr2:77506315-77506334 MsG0280010948.01.T01:intron 30.0%
!! GTCATTGATTCATATTCTGT+AGG - Chr2:77506461-77506480 MsG0280010948.01.T01:intron 30.0%
!! TCACACTTTTTACATTCAGA+AGG + Chr2:77506036-77506055 None:intergenic 30.0%
!! TGGATTTTTCGGTAAGATAA+GGG + Chr2:77503090-77503109 None:intergenic 30.0%
!! TGTTTCAAGCATTGGTAAAA+TGG + Chr2:77507100-77507119 None:intergenic 30.0%
!! TTGGATTTTTCGGTAAGATA+AGG + Chr2:77503091-77503110 None:intergenic 30.0%
!!! AGATCTTGGATATTTTGATG+AGG - Chr2:77506594-77506613 MsG0280010948.01.T01:intron 30.0%
!!! ATAGGAAGTGGTTTGTTTTT+TGG - Chr2:77505671-77505690 MsG0280010948.01.T01:intron 30.0%
!!! ATTTTTCCTGATGCTGTTTT+TGG + Chr2:77507570-77507589 None:intergenic 30.0%
AAAAACATGGAATGGAAGCA+AGG + Chr2:77506012-77506031 None:intergenic 35.0%
AAAGATAACTATTAGGAGCG+AGG + Chr2:77503289-77503308 None:intergenic 35.0%
AAATTTGAATGACACTCGTG+TGG - Chr2:77507805-77507824 MsG0280010948.01.T01:CDS 35.0%
ACAACAGCATCAAGTATTTC+AGG + Chr2:77507047-77507066 None:intergenic 35.0%
ACATTCAGAAGGCAAAAACA+TGG + Chr2:77506025-77506044 None:intergenic 35.0%
ACCTTTCAAAAAACTGCGAA+GGG - Chr2:77507524-77507543 MsG0280010948.01.T01:CDS 35.0%
ACGGGGTAAAGATAACTATT+AGG + Chr2:77503296-77503315 None:intergenic 35.0%
AGAATCAGCATCTATAAGAG+CGG + Chr2:77503168-77503187 None:intergenic 35.0%
AGGTTATTACAACAATCCAC+AGG - Chr2:77506528-77506547 MsG0280010948.01.T01:intron 35.0%
AGTAGGTCAGATGAGATAAT+TGG + Chr2:77507451-77507470 None:intergenic 35.0%
AGTCCAAACACATGAAACAT+TGG + Chr2:77503749-77503768 None:intergenic 35.0%
ATGTATCCACACTGACAATT+TGG + Chr2:77505543-77505562 None:intergenic 35.0%
CAAACCACTTCCTATTCATA+TGG + Chr2:77505666-77505685 None:intergenic 35.0%
CACTATCATAATGTCATGAG+AGG + Chr2:77507309-77507328 None:intergenic 35.0%
CAGTACAGTGATGAAGAAAA+TGG + Chr2:77506979-77506998 None:intergenic 35.0%
CCAAAAGTTTATTGCTGATC+AGG - Chr2:77507255-77507274 MsG0280010948.01.T01:CDS 35.0%
CTAAATTAGCCCACCTAAAT+TGG + Chr2:77505275-77505294 None:intergenic 35.0%
CTACCAATGTTTCATGTGTT+TGG - Chr2:77503743-77503762 MsG0280010948.01.T01:intron 35.0%
CTTAGTTTCATAAACTCTCC+AGG + Chr2:77505003-77505022 None:intergenic 35.0%
CTTCATCAAGTATAACCACA+AGG + Chr2:77506915-77506934 None:intergenic 35.0%
GAAAAAATGCAGAGACAAGT+AGG + Chr2:77507468-77507487 None:intergenic 35.0%
GACTATAGATGAAAAAGGGT+GGG - Chr2:77506561-77506580 MsG0280010948.01.T01:intron 35.0%
GATAATTTAGGGGAGACTTA+CGG + Chr2:77507074-77507093 None:intergenic 35.0%
TAACATCTATGCACATCAGA+AGG + Chr2:77506083-77506102 None:intergenic 35.0%
TAAGATAAGGGAAGGTCTTA+AGG + Chr2:77503078-77503097 None:intergenic 35.0%
TCAAATCAGCAAATCCAAAC+AGG - Chr2:77505098-77505117 MsG0280010948.01.T01:intron 35.0%
TCGATGGATGATGAATTGAA+CGG - Chr2:77503692-77503711 MsG0280010948.01.T01:CDS 35.0%
TCTTCAAACAGAAACTTCAG+TGG + Chr2:77506294-77506313 None:intergenic 35.0%
TGACGTGAAACAAACTGATA+CGG - Chr2:77503580-77503599 MsG0280010948.01.T01:intron 35.0%
TGACTATAGATGAAAAAGGG+TGG - Chr2:77506560-77506579 MsG0280010948.01.T01:intron 35.0%
TGGCATTTGAATTACATACC+TGG + Chr2:77506675-77506694 None:intergenic 35.0%
TGTATCCACACTGACAATTT+GGG + Chr2:77505542-77505561 None:intergenic 35.0%
TTCGAATCGTTTGTGAAACT+CGG - Chr2:77503530-77503549 MsG0280010948.01.T01:intron 35.0%
TTGCTGATCAGGTAAGATAA+TGG - Chr2:77507266-77507285 MsG0280010948.01.T01:CDS 35.0%
TTGTAAGAACATAGCCTGTT+TGG + Chr2:77505115-77505134 None:intergenic 35.0%
! AGAGCATTTAAGCTCTGTTT+AGG - Chr2:77506165-77506184 MsG0280010948.01.T01:intron 35.0%
! AGCTTGTTTAGAAACTTCGA+CGG + Chr2:77503381-77503400 None:intergenic 35.0%
! ATAGCTGATTCAGCTTAACT+TGG - Chr2:77505788-77505807 MsG0280010948.01.T01:intron 35.0%
! ATCGCATGTTTTCGGTAATT+GGG - Chr2:77507121-77507140 MsG0280010948.01.T01:CDS 35.0%
! CCATGATTTTTGTGGTTTCA+GGG - Chr2:77505415-77505434 MsG0280010948.01.T01:CDS 35.0%
! CCTGATCAGCAATAAACTTT+TGG + Chr2:77507258-77507277 None:intergenic 35.0%
! TCCATGATTTTTGTGGTTTC+AGG - Chr2:77505414-77505433 MsG0280010948.01.T01:CDS 35.0%
! TGAAACACATCGCATGTTTT+CGG - Chr2:77507113-77507132 MsG0280010948.01.T01:CDS 35.0%
! TTTCTTTTGAACACCGCATA+CGG - Chr2:77506214-77506233 MsG0280010948.01.T01:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - Chr2:77504919-77504938 MsG0280010948.01.T01:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + Chr2:77504938-77504919 None:intergenic 35.0%
!! AATGTGATATTCTGGGATTG+AGG - Chr2:77506775-77506794 MsG0280010948.01.T01:intron 35.0%
!! ACAGAGATTTTCTAGTGCTT+TGG + Chr2:77502953-77502972 None:intergenic 35.0%
!! GGTAAGATAATGGACAAACT+TGG - Chr2:77507276-77507295 MsG0280010948.01.T01:CDS 35.0%
!! TTCAAAATGAGTGTCGCTTT+AGG - Chr2:77504721-77504740 MsG0280010948.01.T01:intron 35.0%
!! TTGTTTCTGTGGAGAATACA+AGG - Chr2:77505464-77505483 MsG0280010948.01.T01:intron 35.0%
!! TTTTTCGGTAAGATAAGGGA+AGG + Chr2:77503086-77503105 None:intergenic 35.0%
!!! AAGGGATTTTAATTGAGCGA+AGG + Chr2:77503204-77503223 None:intergenic 35.0%
!!! CTATAAGAGCGGTTTTGTTT+GGG + Chr2:77503157-77503176 None:intergenic 35.0%
!!! CTTGGATATTTTGATGAGGA+TGG - Chr2:77506598-77506617 MsG0280010948.01.T01:intron 35.0%
!!! TATAAGAGCGGTTTTGTTTG+GGG + Chr2:77503156-77503175 None:intergenic 35.0%
!!! TCTATAAGAGCGGTTTTGTT+TGG + Chr2:77503158-77503177 None:intergenic 35.0%
AAAGTTGGAGAGGGTAAAGT+TGG - Chr2:77504865-77504884 MsG0280010948.01.T01:intron 40.0%
AAGAAGCGACTTTGTTGAAG+AGG + Chr2:77503133-77503152 None:intergenic 40.0%
AATCACTCCTTTGCTTACAC+CGG + Chr2:77503633-77503652 None:intergenic 40.0%
ACCACTTCCTATTCATATGG+AGG + Chr2:77505663-77505682 None:intergenic 40.0%
ACTGTTCCAAAAACAGCATC+AGG - Chr2:77507561-77507580 MsG0280010948.01.T01:CDS 40.0%
AGAATACAAGGATGGGGATT+CGG - Chr2:77505476-77505495 MsG0280010948.01.T01:intron 40.0%
AGTGAGCGAGTTTAATCGTA+AGG + Chr2:77503223-77503242 None:intergenic 40.0%
AGTGTACCTGGCATCATATT+AGG + Chr2:77505613-77505632 None:intergenic 40.0%
ATATCTGCTGAATCCGTATG+CGG + Chr2:77506230-77506249 None:intergenic 40.0%
ATGCGATGTGTTTCAAGCAT+TGG + Chr2:77507108-77507127 None:intergenic 40.0%
ATGCGATTGTTTCGTTGAAG+CGG - Chr2:77503804-77503823 MsG0280010948.01.T01:intron 40.0%
ATGGTATGACTGAGACTTGT+GGG - Chr2:77505440-77505459 MsG0280010948.01.T01:intron 40.0%
ATGTTCAACCTGTCTAGTCT+AGG + Chr2:77505722-77505741 None:intergenic 40.0%
ATTTCAACTGAATCGCTGTC+AGG - Chr2:77506749-77506768 MsG0280010948.01.T01:intron 40.0%
CACCTTTCAAAAAACTGCGA+AGG - Chr2:77507523-77507542 MsG0280010948.01.T01:CDS 40.0%
CAGAAGGCAAAAACATGGAA+TGG + Chr2:77506020-77506039 None:intergenic 40.0%
CAGCTGAAGCAATGAAATTC+TGG + Chr2:77503664-77503683 None:intergenic 40.0%
CCCTGAAACCACAAAAATCA+TGG + Chr2:77505418-77505437 None:intergenic 40.0%
CTATGCACATCAGGAAGAAA+AGG + Chr2:77505968-77505987 None:intergenic 40.0%
CTTCATCACTGTACTGTCTT+AGG - Chr2:77506983-77507002 MsG0280010948.01.T01:CDS 40.0%
GACAGCGATTCAGTTGAAAT+TGG + Chr2:77506749-77506768 None:intergenic 40.0%
GATCAAGTATAAAGGGTTCC+AGG - Chr2:77506654-77506673 MsG0280010948.01.T01:intron 40.0%
GTGAGCGAGTTTAATCGTAA+GGG + Chr2:77503222-77503241 None:intergenic 40.0%
TATGGTATGACTGAGACTTG+TGG - Chr2:77505439-77505458 MsG0280010948.01.T01:intron 40.0%
TCCATTAACTCTTTCCCAAG+AGG + Chr2:77503980-77503999 None:intergenic 40.0%
TCCTCAGTTAGTGAGCTATT+GGG + Chr2:77507229-77507248 None:intergenic 40.0%
TCCTCCATATGAATAGGAAG+TGG - Chr2:77505659-77505678 MsG0280010948.01.T01:intron 40.0%
TCCTCTTGGGAAAGAGTTAA+TGG - Chr2:77503976-77503995 MsG0280010948.01.T01:intron 40.0%
TCGTGTGGTGAAGAAAACTA+TGG - Chr2:77507820-77507839 MsG0280010948.01.T01:CDS 40.0%
TCTGTGGAGAATACAAGGAT+GGG - Chr2:77505469-77505488 MsG0280010948.01.T01:intron 40.0%
TGAAAAAGGGTGGGTACATA+CGG - Chr2:77506570-77506589 MsG0280010948.01.T01:intron 40.0%
TGCTCTAGCGAAACATGATT+TGG - Chr2:77503904-77503923 MsG0280010948.01.T01:intron 40.0%
TGGAGAAACTTCTGAACGTT+TGG - Chr2:77503504-77503523 MsG0280010948.01.T01:intron 40.0%
TGTATGGAAATGCATCCCAA+TGG - Chr2:77506364-77506383 MsG0280010948.01.T01:intron 40.0%
TGTGAGAGAAAAGTTGGAGA+GGG - Chr2:77504856-77504875 MsG0280010948.01.T01:intron 40.0%
TGTTCAACCTGTCTAGTCTA+GGG + Chr2:77505721-77505740 None:intergenic 40.0%
TTCAGCTGCAATGATTTCGA+TGG - Chr2:77503676-77503695 MsG0280010948.01.T01:CDS 40.0%
TTCCTCAGTTAGTGAGCTAT+TGG + Chr2:77507230-77507249 None:intergenic 40.0%
TTCGCTAGAGCAAGTACAAT+CGG + Chr2:77503896-77503915 None:intergenic 40.0%
TTCTGTGGAGAATACAAGGA+TGG - Chr2:77505468-77505487 MsG0280010948.01.T01:intron 40.0%
TTGAATTCCCTAGACTAGAC+AGG - Chr2:77505711-77505730 MsG0280010948.01.T01:intron 40.0%
TTGTGTGTCTTAACCCACTT+GGG - Chr2:77505175-77505194 MsG0280010948.01.T01:intron 40.0%
TTGTTTAGAAACTTCGACGG+TGG + Chr2:77503378-77503397 None:intergenic 40.0%
TTTCTCCCATAATTCAGCGA+CGG + Chr2:77503432-77503451 None:intergenic 40.0%
TTTGTGTGTCTTAACCCACT+TGG - Chr2:77505174-77505193 MsG0280010948.01.T01:intron 40.0%
! AGTTTAGGGTTACGAGATTG+TGG - Chr2:77503861-77503880 MsG0280010948.01.T01:CDS 40.0%
! CATCGCATGTTTTCGGTAAT+TGG - Chr2:77507120-77507139 MsG0280010948.01.T01:CDS 40.0%
! CTAGACAGGTTGAACATAAC+TGG - Chr2:77505725-77505744 MsG0280010948.01.T01:intron 40.0%
! GTTTCATGTGTTTGGACTAG+CGG - Chr2:77503751-77503770 MsG0280010948.01.T01:intron 40.0%
! TTTTTGTGGTTTCAGGGCTA+TGG - Chr2:77505421-77505440 MsG0280010948.01.T01:CDS 40.0%
!! AGTTGTTTTGTTCCACACAG+TGG + Chr2:77507760-77507779 None:intergenic 40.0%
!! TTCTAGTGCTTTGGTGATGA+TGG + Chr2:77502944-77502963 None:intergenic 40.0%
!!! ACCCTTCGCAGTTTTTTGAA+AGG + Chr2:77507528-77507547 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - Chr2:77504959-77504978 MsG0280010948.01.T01:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + Chr2:77504978-77504959 None:intergenic 40.0%
ACCATGCATCTATGCACATC+AGG + Chr2:77505977-77505996 None:intergenic 45.0%
ACCCAATAGCTCACTAACTG+AGG - Chr2:77507225-77507244 MsG0280010948.01.T01:CDS 45.0%
AGAAATCTCCTTCCAGTCAC+CGG + Chr2:77506337-77506356 None:intergenic 45.0%
AGATCAGGTTACGGTTCAGA+TGG - Chr2:77503041-77503060 MsG0280010948.01.T01:three_prime_UTR 45.0%
AGCAGTGGAAACATGCAAAC+AGG + Chr2:77507426-77507445 None:intergenic 45.0%
AGGAATTGAGAAAAACGGCG+GGG + Chr2:77503472-77503491 None:intergenic 45.0%
ATAGTCAATCTTGTGGCCTG+TGG + Chr2:77506547-77506566 None:intergenic 45.0%
ATCGCAAGACAAACCCAGTT+AGG - Chr2:77507344-77507363 MsG0280010948.01.T01:CDS 45.0%
ATGAGATAATTGGCCAGCAG+TGG + Chr2:77507441-77507460 None:intergenic 45.0%
ATGCTACATTGCAGTGTACC+TGG + Chr2:77505625-77505644 None:intergenic 45.0%
ATTGGGTGTTCGCACAACAT+AGG + Chr2:77507212-77507231 None:intergenic 45.0%
CATCACCGTCGCTGAATTAT+GGG - Chr2:77503424-77503443 MsG0280010948.01.T01:intron 45.0%
CCAATGCAGAGATCAGGTTA+CGG - Chr2:77503032-77503051 MsG0280010948.01.T01:three_prime_UTR 45.0%
CGTGAAACAAACTGATACGG+CGG - Chr2:77503583-77503602 MsG0280010948.01.T01:intron 45.0%
CTGTGGAGAATACAAGGATG+GGG - Chr2:77505470-77505489 MsG0280010948.01.T01:intron 45.0%
GAAAAAGGGTGGGTACATAC+GGG - Chr2:77506571-77506590 MsG0280010948.01.T01:intron 45.0%
GAGCAGCATACACATTATGC+TGG + Chr2:77506865-77506884 None:intergenic 45.0%
GAGGAATTGAGAAAAACGGC+GGG + Chr2:77503473-77503492 None:intergenic 45.0%
GCCGGAGGAATTGAGAAAAA+CGG + Chr2:77503477-77503496 None:intergenic 45.0%
GGAAACACCACAAAGCCATT+GGG + Chr2:77506382-77506401 None:intergenic 45.0%
GGAGGAATTGAGAAAAACGG+CGG + Chr2:77503474-77503493 None:intergenic 45.0%
GTGTGAGAGAAAAGTTGGAG+AGG - Chr2:77504855-77504874 MsG0280010948.01.T01:intron 45.0%
TCATCACCGTCGCTGAATTA+TGG - Chr2:77503423-77503442 MsG0280010948.01.T01:intron 45.0%
TCCTGATGTGCATAGATGCA+TGG - Chr2:77505973-77505992 MsG0280010948.01.T01:intron 45.0%
TGTTATTACCGGTGACTGGA+AGG - Chr2:77506326-77506345 MsG0280010948.01.T01:intron 45.0%
TGTTTGCATGTTTCCACTGC+TGG - Chr2:77507425-77507444 MsG0280010948.01.T01:CDS 45.0%
TTCGGTGATTAAGGCTCTGT+TGG - Chr2:77504087-77504106 MsG0280010948.01.T01:intron 45.0%
! AATGCATCCCAATGGCTTTG+TGG - Chr2:77506372-77506391 MsG0280010948.01.T01:intron 45.0%
! AGAAGACCTTCAAGTTCTGC+TGG + Chr2:77507014-77507033 None:intergenic 45.0%
! GAAGCGGTTTGAGTTTGAAG+TGG - Chr2:77503820-77503839 MsG0280010948.01.T01:CDS 45.0%
! GCTTTTCCAATGCAGAGATC+AGG - Chr2:77503026-77503045 MsG0280010948.01.T01:three_prime_UTR 45.0%
! GGTGGTGTATTGTGGATTGA+CGG + Chr2:77503360-77503379 None:intergenic 45.0%
!! ATGAGTGTCGCTTTAGGCTT+TGG - Chr2:77504727-77504746 MsG0280010948.01.T01:intron 45.0%
!! GAAGAGAACGACGTCGTTTT+TGG + Chr2:77503267-77503286 None:intergenic 45.0%
!! GACTTGTGGGATTGTTTCTG+TGG - Chr2:77505453-77505472 MsG0280010948.01.T01:intron 45.0%
!! GCTTTGTTATTACCGGTGAC+TGG - Chr2:77506322-77506341 MsG0280010948.01.T01:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - Chr2:77504958-77504977 MsG0280010948.01.T01:intron 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + Chr2:77504977-77504958 None:intergenic 45.0%
!!! GCCGTTTTTCTCAATTCCTC+CGG - Chr2:77503473-77503492 MsG0280010948.01.T01:intron 45.0%
ACGTATTCGCAGCTTCAGAG+AGG - Chr2:77503779-77503798 MsG0280010948.01.T01:intron 50.0%
ACTTCGACGGTGGTGTATTG+TGG + Chr2:77503368-77503387 None:intergenic 50.0%
AGAGTCGAACCTGAGACCTT+GGG + Chr2:77505244-77505263 None:intergenic 50.0%
AGATTTCCTGATGCCGAAGC+AGG - Chr2:77507172-77507191 MsG0280010948.01.T01:CDS 50.0%
AGCAACGGCGAGGAAGAAAA+CGG + Chr2:77503315-77503334 None:intergenic 50.0%
CAGAAGTTTGGACCACTGTG+TGG - Chr2:77507745-77507764 MsG0280010948.01.T01:CDS 50.0%
CCGTAACCTGATCTCTGCAT+TGG + Chr2:77503035-77503054 None:intergenic 50.0%
CGTATTCGCAGCTTCAGAGA+GGG - Chr2:77503780-77503799 MsG0280010948.01.T01:intron 50.0%
GCTAGAGCAAGTACAATCGG+TGG + Chr2:77503893-77503912 None:intergenic 50.0%
GGAAGCCCAAATTGTCAGTG+TGG - Chr2:77505534-77505553 MsG0280010948.01.T01:intron 50.0%
GGGAAACACCACAAAGCCAT+TGG + Chr2:77506383-77506402 None:intergenic 50.0%
GTGTCTTAACCCACTTGGGT+TGG - Chr2:77505179-77505198 MsG0280010948.01.T01:intron 50.0%
GTTCGCACAACATAGGCAAC+CGG + Chr2:77507205-77507224 None:intergenic 50.0%
GTTGCACCAGCAGAACTTGA+AGG - Chr2:77507005-77507024 MsG0280010948.01.T01:CDS 50.0%
TAGACAGCTCGGGGAGATAT+GGG - Chr2:77505579-77505598 MsG0280010948.01.T01:intron 50.0%
TAGCCCACCTAAATTGGCAC+CGG + Chr2:77505269-77505288 None:intergenic 50.0%
TGGGTACATACGGGAGATCT+TGG - Chr2:77506580-77506599 MsG0280010948.01.T01:intron 50.0%
TTGTATTCCTCCGGTACCAC+CGG - Chr2:77503611-77503630 MsG0280010948.01.T01:CDS 50.0%
TTTGCTTACACCGGTGGTAC+CGG + Chr2:77503624-77503643 None:intergenic 50.0%
! CTCAGCTGGAATGCTTGTTG+CGG - Chr2:77505507-77505526 MsG0280010948.01.T01:intron 50.0%
! GGTGTATTGTGGATTGACGG+TGG + Chr2:77503357-77503376 None:intergenic 50.0%
! TCAGCTGGAATGCTTGTTGC+GGG - Chr2:77505508-77505527 MsG0280010948.01.T01:intron 50.0%
!! CTCAAGTAGTTTGCTCGTGC+TGG - Chr2:77506126-77506145 MsG0280010948.01.T01:intron 50.0%
!! GCGACGGTGATGATGAGTTT+TGG + Chr2:77503416-77503435 None:intergenic 50.0%
AACCGGAACCTCACCTGCTT+CGG + Chr2:77507188-77507207 None:intergenic 55.0%
ACCTGAGAAACGACAGCACG+AGG + Chr2:77504022-77504041 None:intergenic 55.0%
AGCCCACCTAAATTGGCACC+GGG + Chr2:77505268-77505287 None:intergenic 55.0%
AGGATGGGGATTCGGCATAC+TGG - Chr2:77505484-77505503 MsG0280010948.01.T01:intron 55.0%
AGGTCCCAAGCCAATACCAC+CGG + Chr2:77505206-77505225 None:intergenic 55.0%
CAACGGCGAGGAAGAAAACG+GGG + Chr2:77503313-77503332 None:intergenic 55.0%
CACTCCTTTGCTTACACCGG+TGG + Chr2:77503630-77503649 None:intergenic 55.0%
CATATCTCCCCGAGCTGTCT+AGG + Chr2:77505580-77505599 None:intergenic 55.0%
CGGGGTCCTAATATGATGCC+AGG - Chr2:77505604-77505623 MsG0280010948.01.T01:intron 55.0%
CTAGACAGCTCGGGGAGATA+TGG - Chr2:77505578-77505597 MsG0280010948.01.T01:intron 55.0%
GAAAAACGGCGGGGAGTTTG+AGG + Chr2:77503463-77503482 None:intergenic 55.0%
GAGAGTCGAACCTGAGACCT+TGG + Chr2:77505245-77505264 None:intergenic 55.0%
GAGTCGAACCTGAGACCTTG+GGG + Chr2:77505243-77505262 None:intergenic 55.0%
GCAACGGCGAGGAAGAAAAC+GGG + Chr2:77503314-77503333 None:intergenic 55.0%
GCGGCGTTGTTGTATTCCTC+CGG - Chr2:77503602-77503621 MsG0280010948.01.T01:intron 55.0%
GGTACCACCGGTGTAAGCAA+AGG - Chr2:77503623-77503642 MsG0280010948.01.T01:CDS 55.0%
TGGATTGACGGTGGAAGCGA+CGG + Chr2:77503348-77503367 None:intergenic 55.0%
TTCCTCGCCGTTGCTTCCAT+CGG - Chr2:77503320-77503339 MsG0280010948.01.T01:CDS 55.0%
! ACTCTCCCCGGTGCCAATTT+AGG - Chr2:77505259-77505278 MsG0280010948.01.T01:intron 55.0%
! TCCCCGGTGCCAATTTAGGT+GGG - Chr2:77505263-77505282 MsG0280010948.01.T01:CDS 55.0%
! TCCTCGTGCTGTCGTTTCTC+AGG - Chr2:77504018-77504037 MsG0280010948.01.T01:intron 55.0%
! TGCTCGTGCTGGTATAGAGC+TGG - Chr2:77506137-77506156 MsG0280010948.01.T01:intron 55.0%
! TGGAATGCTTGTTGCGGGTG+TGG - Chr2:77505513-77505532 MsG0280010948.01.T01:intron 55.0%
!! ATTCGGCATACTGGCTCAGC+TGG - Chr2:77505493-77505512 MsG0280010948.01.T01:intron 55.0%
!! GCAAGCAAGCTAGCTTGCTG+AGG - Chr2:77504137-77504156 MsG0280010948.01.T01:intron 55.0%
!! GTGGTATTGGCTTGGGACCT+GGG - Chr2:77505206-77505225 MsG0280010948.01.T01:intron 55.0%
!! GTTCTGGTGCTGCTCCTCTT+GGG - Chr2:77503963-77503982 MsG0280010948.01.T01:intron 55.0%
!! TTAACCCACTTGGGTTGGCC+CGG - Chr2:77505184-77505203 MsG0280010948.01.T01:intron 55.0%
AAGTTTCTCCAGCGTCGCGC+CGG + Chr2:77503495-77503514 None:intergenic 60.0%
ACCTCACCTGCTTCGGCATC+AGG + Chr2:77507181-77507200 None:intergenic 60.0%
ACTCCCTCCTAGACAGCTCG+GGG - Chr2:77505570-77505589 MsG0280010948.01.T01:intron 60.0%
AGCTCGGGGAGATATGGGTG+CGG - Chr2:77505584-77505603 MsG0280010948.01.T01:intron 60.0%
ATCTCCCCGAGCTGTCTAGG+AGG + Chr2:77505577-77505596 None:intergenic 60.0%
CACTCCCTCCTAGACAGCTC+GGG - Chr2:77505569-77505588 MsG0280010948.01.T01:intron 60.0%
CCACTCCCTCCTAGACAGCT+CGG - Chr2:77505568-77505587 MsG0280010948.01.T01:intron 60.0%
GCCCACCTAAATTGGCACCG+GGG + Chr2:77505267-77505286 None:intergenic 60.0%
GGTCCCAAGCCAATACCACC+GGG + Chr2:77505205-77505224 None:intergenic 60.0%
GTCTCAGGTTCGACTCTCCC+CGG - Chr2:77505247-77505266 MsG0280010948.01.T01:intron 60.0%
TCCTGATGCCGAAGCAGGTG+AGG - Chr2:77507177-77507196 MsG0280010948.01.T01:CDS 60.0%
TCGAACCTGAGACCTTGGGG+AGG + Chr2:77505240-77505259 None:intergenic 60.0%
TCTCCCCGAGCTGTCTAGGA+GGG + Chr2:77505576-77505595 None:intergenic 60.0%
TGCCGAAGCAGGTGAGGTTC+CGG - Chr2:77507183-77507202 MsG0280010948.01.T01:CDS 60.0%
! CTCCCCGGTGCCAATTTAGG+TGG - Chr2:77505262-77505281 MsG0280010948.01.T01:CDS 60.0%
!! GGTGGTATTGGCTTGGGACC+TGG - Chr2:77505205-77505224 MsG0280010948.01.T01:intron 60.0%
!! GGTTCTGGTGCTGCTCCTCT+TGG - Chr2:77503962-77503981 MsG0280010948.01.T01:intron 60.0%
!! TGGCCCGGTGGTATTGGCTT+GGG - Chr2:77505199-77505218 MsG0280010948.01.T01:intron 60.0%
!! TTGGCCCGGTGGTATTGGCT+TGG - Chr2:77505198-77505217 MsG0280010948.01.T01:intron 60.0%
!! TTGGGTTGGCCCGGTGGTAT+TGG - Chr2:77505193-77505212 MsG0280010948.01.T01:intron 60.0%
ACCACCGGGCCAACCCAAGT+GGG + Chr2:77505191-77505210 None:intergenic 65.0%
CCGAGCTGTCTAGGAGGGAG+TGG + Chr2:77505571-77505590 None:intergenic 65.0%
CTCGGGGAGATATGGGTGCG+GGG - Chr2:77505586-77505605 MsG0280010948.01.T01:intron 65.0%
GCTCGGGGAGATATGGGTGC+GGG - Chr2:77505585-77505604 MsG0280010948.01.T01:intron 65.0%
GTGCTCCTCCCCAAGGTCTC+AGG - Chr2:77505232-77505251 MsG0280010948.01.T01:intron 65.0%
TACCACCGGGCCAACCCAAG+TGG + Chr2:77505192-77505211 None:intergenic 65.0%
! GCTTACACCGGTGGTACCGG+AGG + Chr2:77503621-77503640 None:intergenic 65.0%
! TGGGAGTGTGCTCCTCCCCA+AGG - Chr2:77505225-77505244 MsG0280010948.01.T01:intron 65.0%
! TTGGGGAGGAGCACACTCCC+AGG + Chr2:77505226-77505245 None:intergenic 65.0%
!! GACGGCGCCGATGGAAGCAA+CGG + Chr2:77503330-77503349 None:intergenic 65.0%
CAATTCCTCCGGCGCGACGC+TGG - Chr2:77503484-77503503 MsG0280010948.01.T01:intron 70.0%
CGCCGATGGAAGCAACGGCG+AGG + Chr2:77503325-77503344 None:intergenic 70.0%
TTTCTCCAGCGTCGCGCCGG+AGG + Chr2:77503492-77503511 None:intergenic 70.0%
!! ACCCACTTGGGTTGGCCCGG+TGG - Chr2:77505187-77505206 MsG0280010948.01.T01:intron 70.0%
! GGTGGAAGCGACGGCGCCGA+TGG + Chr2:77503339-77503358 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr2 gene 77502940 77507945 77502940 ID=MsG0280010948.01;Name=MsG0280010948.01
Chr2 mRNA 77502940 77507945 77502940 ID=MsG0280010948.01.T01;Parent=MsG0280010948.01;Name=MsG0280010948.01.T01;_AED=0.30;_eAED=0.30;_QI=95|1|1|1|1|1|6|313|541
Chr2 exon 77502940 77503366 77502940 ID=MsG0280010948.01.T01:exon:11437;Parent=MsG0280010948.01.T01
Chr2 exon 77503609 77503711 77503609 ID=MsG0280010948.01.T01:exon:11436;Parent=MsG0280010948.01.T01
Chr2 exon 77503813 77503880 77503813 ID=MsG0280010948.01.T01:exon:11435;Parent=MsG0280010948.01.T01
Chr2 exon 77504210 77504355 77504210 ID=MsG0280010948.01.T01:exon:11434;Parent=MsG0280010948.01.T01
Chr2 exon 77505260 77505449 77505260 ID=MsG0280010948.01.T01:exon:11433;Parent=MsG0280010948.01.T01
Chr2 exon 77506846 77507945 77506846 ID=MsG0280010948.01.T01:exon:11432;Parent=MsG0280010948.01.T01
Chr2 five_prime_UTR 77507851 77507945 77507851 ID=MsG0280010948.01.T01:five_prime_utr;Parent=MsG0280010948.01.T01
Chr2 CDS 77506846 77507850 77506846 ID=MsG0280010948.01.T01:cds;Parent=MsG0280010948.01.T01
Chr2 CDS 77505260 77505449 77505260 ID=MsG0280010948.01.T01:cds;Parent=MsG0280010948.01.T01
Chr2 CDS 77504210 77504355 77504210 ID=MsG0280010948.01.T01:cds;Parent=MsG0280010948.01.T01
Chr2 CDS 77503813 77503880 77503813 ID=MsG0280010948.01.T01:cds;Parent=MsG0280010948.01.T01
Chr2 CDS 77503609 77503711 77503609 ID=MsG0280010948.01.T01:cds;Parent=MsG0280010948.01.T01
Chr2 CDS 77503253 77503366 77503253 ID=MsG0280010948.01.T01:cds;Parent=MsG0280010948.01.T01
Chr2 three_prime_UTR 77502940 77503252 77502940 ID=MsG0280010948.01.T01:three_prime_utr;Parent=MsG0280010948.01.T01
Gene Sequence

>MsG0280010948.01.T01

ATGCAGAGATCAGGTTACGGTTCAGATGGAATATACAGATCCTTAAGACCTTCCCTTATCTTACCGAAAAATCCAAATATTTCTCTTGTCACACACCTCTTCAACAAAGTCGCTTCTTCCCCAAACAAAACCGCTCTTATAGATGCTGATTCTTCTCAAACACTTACCTTCGCTCAATTAAAATCCCTTACGATTAAACTCGCTCACTCTTTAATTAAAATCGGTTTAACCAAAAACGACGTCGTTCTCTTCCTCGCTCCTAATAGTTATCTTTACCCCGTTTTCTTCCTCGCCGTTGCTTCCATCGGCGCCGTCGCTTCCACCGTCAATCCACAATACACCACCGTCGAAGTTTCTAAACAAGCTAAAGATTCAAATCCAAAACTCATCATCACCGTCGCTGAATTATGGGAGAAAGTAAATCACCTCAAACTCCCCGCCGTTTTTCTCAATTCCTCCGGCGCGACGCTGGAGAAACTTCTGAACGTTTGGAGTTTCGAATCGTTTGTGAAACTCGGCGATTCAGAAACCGAATTTCCAAAAATTGACGTGAAACAAACTGATACGGCGGCGTTGTTGTATTCCTCCGGTACCACCGGTGTAAGCAAAGGAGTGATTCTAACTCACCAGAATTTCATTGCTTCAGCTGCAATGATTTCGATGGATGATGAATTGAACGGTGAAATCAACGATGTGTATCTCGTTGTTCTACCAATGTTTCATGTGTTTGGACTAGCGGTGATAACGTATTCGCAGCTTCAGAGAGGGAATGCGATTGTTTCGTTGAAGCGGTTTGAGTTTGAAGTGGTTTTGAAAACGATTGAGAAGTTTAGGGTTACGAGATTGTGGATAGTGCCACCGATTGTACTTGCTCTAGCGAAACATGATTTGGTTGATAAGTATGATCTTTCGAGTTTGAAGTATATTGGTTCTGGTGCTGCTCCTCTTGGGAAAGAGTTAATGGAAGAGTGTGCTAAGCGTTTTCCTCGTGCTGTCGTTTCTCAGGGCTATGGTATGACTGAGACTTGTGGGATTGTTTCTGTGGAGAATACAAGGATGGGGATTCGGCATACTGGCTCAGCTGGAATGCTTGTTGCGGGTGTGGAAGCCCAAATTGTCAGTGTGGATACATTGAAGCCACTCCCTCCTAGACAGCTCGGGGAGATATGGGTGCGGGGTCCTAATATGATGCCAGGTTATTACAACAATCCACAGGCCACAAGATTGACTATAGATGAAAAAGGGTGGGTACATACGGGAGATCTTGGATATTTTGATGAGGATGGAAATCTTTTTGTCGTTGACCGTATCAAAGAACTGATCAAGTATAAAGGGTTCCAGGTTGCACCAGCAGAACTTGAAGGTCTTCTTGTTTCTCATCCTGAAATACTTGATGCTGTTGTCATTCCATTTCCTGATGCCGAAGCAGGTGAGGTTCCGGTTGCCTATGTTGTGCGAACACCCAATAGCTCACTAACTGAGGAAGATATCCAAAAGTTTATTGCTGATCAGGTAGCACCTTTCAAAAAACTGCGAAGGGTGACATTTATCAACACTGTTCCAAAAACAGCATCAGGAAAAATTCTGAGAAGAGAGCTTATTGACAAAGCACGATCCAAAATATAA
Protein sequence

>MsG0280010948.01.T01

MQRSGYGSDGIYRSLRPSLILPKNPNISLVTHLFNKVASSPNKTALIDADSSQTLTFAQLKSLTIKLAHSLIKIGLTKNDVVLFLAPNSYLYPVFFLAVASIGAVASTVNPQYTTVEVSKQAKDSNPKLIITVAELWEKVNHLKLPAVFLNSSGATLEKLLNVWSFESFVKLGDSETEFPKIDVKQTDTAALLYSSGTTGVSKGVILTHQNFIASAAMISMDDELNGEINDVYLVVLPMFHVFGLAVITYSQLQRGNAIVSLKRFEFEVVLKTIEKFRVTRLWIVPPIVLALAKHDLVDKYDLSSLKYIGSGAAPLGKELMEECAKRFPRAVVSQGYGMTETCGIVSVENTRMGIRHTGSAGMLVAGVEAQIVSVDTLKPLPPRQLGEIWVRGPNMMPGYYNNPQATRLTIDEKGWVHTGDLGYFDEDGNLFVVDRIKELIKYKGFQVAPAELEGLLVSHPEILDAVVIPFPDAEAGEVPVAYVVRTPNSSLTEEDIQKFIADQVAPFKKLRRVTFINTVPKTASGKILRRELIDKARSKI*