AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028763.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028763.01.T01 MTR_5g076240 97.325 486 11 1 1 484 77 562 0.0 982
MsG0580028763.01.T01 MTR_5g076220 66.173 473 159 1 1 472 77 549 0.0 686
MsG0580028763.01.T01 MTR_5g076200 64.718 479 168 1 1 478 77 555 0.0 676
MsG0580028763.01.T01 MTR_0161s0050 64.842 475 164 2 1 472 77 551 0.0 650
MsG0580028763.01.T01 MTR_8g074040 50.209 478 224 6 1 474 1 468 7.83e-174 498
MsG0580028763.01.T01 MTR_3g064420 52.772 487 200 8 1 469 77 551 4.69e-173 499
MsG0580028763.01.T01 MTR_5g008800 52.292 480 213 7 1 476 77 544 3.11e-172 496
MsG0580028763.01.T01 MTR_8g074040 50.209 478 224 6 1 474 119 586 3.15e-172 498
MsG0580028763.01.T01 MTR_8g074120 50.628 478 222 7 1 474 30 497 1.19e-171 493
MsG0580028763.01.T01 MTR_5g008820 49.686 477 226 6 2 476 78 542 7.17e-165 477
MsG0580028763.01.T01 MTR_4g121600 48.041 485 237 7 1 475 83 562 1.22e-161 469
MsG0580028763.01.T01 MTR_2g044180 48.041 485 231 8 1 472 83 559 3.51e-159 463
MsG0580028763.01.T01 MTR_2g044180 47.390 479 231 8 10 475 1 471 6.27e-155 449
MsG0580028763.01.T01 MTR_5g023730 40.252 477 266 10 2 472 81 544 2.91e-115 350
MsG0580028763.01.T01 MTR_0803s0020 31.250 464 286 12 3 460 300 736 1.48e-51 188
MsG0580028763.01.T01 MTR_1569s0010 32.970 367 213 10 112 465 182 528 6.17e-44 162
MsG0580028763.01.T01 MTR_4g077900 33.058 363 210 12 118 465 127 471 3.06e-43 159
MsG0580028763.01.T01 MTR_2g105570 32.425 367 221 11 112 465 190 542 4.75e-43 160
MsG0580028763.01.T01 MTR_5g027480 32.345 371 220 13 110 466 196 549 3.57e-40 152
MsG0580028763.01.T01 MTR_5g027500 30.939 362 219 13 118 465 217 561 1.90e-39 150
MsG0580028763.01.T01 MTR_4g128337 32.718 379 211 15 105 466 187 538 5.18e-36 140
MsG0580028763.01.T01 MTR_2g095510 28.362 409 241 12 76 461 149 528 6.11e-36 140
MsG0580028763.01.T01 MTR_3g035130 30.831 373 225 16 108 470 160 509 1.07e-34 136
MsG0580028763.01.T01 MTR_4g005750 29.676 401 254 12 79 465 149 535 5.87e-34 134
MsG0580028763.01.T01 MTR_3g460770 30.400 375 227 13 107 466 180 535 3.07e-33 132
MsG0580028763.01.T01 MTR_1g026310 27.296 392 249 10 93 468 185 556 9.89e-33 131
MsG0580028763.01.T01 MTR_1g090737 28.141 398 248 11 80 461 180 555 1.11e-32 131
MsG0580028763.01.T01 MTR_3g088880 28.723 376 240 10 108 472 198 556 1.31e-32 130
MsG0580028763.01.T01 MTR_3g088870 29.396 381 234 12 108 472 197 558 3.32e-32 129
MsG0580028763.01.T01 MTR_8g039720 28.954 373 224 11 112 468 208 555 5.97e-32 129
MsG0580028763.01.T01 MTR_5g007640 29.600 375 231 14 107 466 221 577 3.22e-31 127
MsG0580028763.01.T01 MTR_2g030240 28.460 383 249 9 108 466 66 447 4.47e-31 125
MsG0580028763.01.T01 MTR_1g063110 27.390 387 255 10 88 461 164 537 9.67e-31 125
MsG0580028763.01.T01 MTR_2g030240 28.460 383 249 9 108 466 160 541 9.70e-31 125
MsG0580028763.01.T01 MTR_1g063120 26.398 447 276 13 59 471 124 551 2.62e-30 124
MsG0580028763.01.T01 MTR_4g057730 27.989 368 226 11 110 461 187 531 5.23e-30 123
MsG0580028763.01.T01 MTR_1g073180 27.568 370 237 10 109 467 181 530 3.04e-28 118
MsG0580028763.01.T01 MTR_4g011790 28.040 403 242 15 97 467 208 594 2.06e-27 115
MsG0580028763.01.T01 MTR_4g011790 28.000 400 240 15 97 464 208 591 1.38e-26 113
MsG0580028763.01.T01 MTR_4g013210 26.327 452 277 15 54 467 8 441 1.80e-26 112
MsG0580028763.01.T01 MTR_4g011790 27.295 414 240 15 97 467 208 603 7.87e-26 111
MsG0580028763.01.T01 MTR_3g035130 29.206 315 200 11 108 413 160 460 5.58e-25 107
MsG0580028763.01.T01 MTR_1586s0010 26.829 328 212 9 5 321 111 421 2.13e-24 105
MsG0580028763.01.T01 MTR_2g095510 27.859 341 193 12 58 368 122 439 5.16e-24 104
MsG0580028763.01.T01 MTR_1054s0020 24.672 458 286 16 27 471 360 771 1.93e-23 104
MsG0580028763.01.T01 MTR_7g084850 27.937 383 238 13 110 468 352 720 5.77e-23 102
MsG0580028763.01.T01 MTR_4g057730 28.053 303 183 9 110 396 187 470 1.14e-22 100
MsG0580028763.01.T01 MTR_1g073180 25.714 350 230 9 109 448 203 532 1.87e-22 100
MsG0580028763.01.T01 MTR_4g013210 25.576 434 262 15 54 467 8 400 5.24e-22 98.2
MsG0580028763.01.T01 MTR_4g013210 25.747 435 260 17 54 467 160 552 1.47e-21 98.2
MsG0580028763.01.T01 MTR_4g013210 25.822 426 260 15 54 441 160 567 4.66e-19 90.5
MsG0580028763.01.T01 MTR_4g057730 27.636 275 164 9 110 368 187 442 1.72e-17 85.1
MsG0580028763.01.T01 MTR_1g034360 23.316 386 214 13 71 391 176 544 1.21e-13 73.9
MsG0580028763.01.T01 MTR_3g087980 49.398 83 36 3 315 391 500 582 2.65e-13 72.8
MsG0580028763.01.T01 MTR_1g030290 35.429 175 88 9 228 391 424 584 1.03e-12 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028763.01.T01 AT5G16370 66.597 476 153 4 1 475 78 548 0.0 673
MsG0580028763.01.T01 AT5G16340 66.456 474 151 5 1 472 78 545 0.0 666
MsG0580028763.01.T01 AT1G75960 63.214 473 166 5 1 471 78 544 0.0 628
MsG0580028763.01.T01 AT1G21540 61.945 473 175 4 1 471 80 549 0.0 619
MsG0580028763.01.T01 AT1G21530 61.895 475 171 7 1 471 80 548 0.0 611
MsG0580028763.01.T01 AT1G21530 61.895 475 169 8 1 471 80 546 0.0 604
MsG0580028763.01.T01 AT1G77240 61.814 474 170 6 1 471 79 544 0.0 602
MsG0580028763.01.T01 AT1G20560 49.897 485 231 6 1 481 1 477 3.91e-169 485
MsG0580028763.01.T01 AT1G20560 49.897 485 231 6 1 481 79 555 2.71e-168 486
MsG0580028763.01.T01 AT3G16910 50.308 487 226 7 1 476 85 566 7.07e-168 486
MsG0580028763.01.T01 AT2G17650 51.446 484 221 7 1 474 124 603 5.34e-163 474
MsG0580028763.01.T01 AT1G65890 49.174 484 228 5 1 471 77 555 1.42e-158 462
MsG0580028763.01.T01 AT1G66120 49.585 482 222 8 1 471 77 548 7.52e-157 457
MsG0580028763.01.T01 AT1G65880 48.255 487 229 7 1 471 77 556 8.24e-155 452
MsG0580028763.01.T01 AT1G76290 42.678 478 252 8 1 472 77 538 3.47e-125 375
MsG0580028763.01.T01 AT1G68270 42.946 482 231 8 1 471 77 525 2.48e-122 368
MsG0580028763.01.T01 AT3G21240 30.928 388 241 12 91 465 174 547 1.29e-40 154
MsG0580028763.01.T01 AT3G21230 30.831 373 223 11 109 465 208 561 1.04e-37 145
MsG0580028763.01.T01 AT1G20500 28.176 433 266 14 55 468 140 546 2.37e-36 141
MsG0580028763.01.T01 AT1G20510 29.301 372 227 11 112 468 190 540 2.51e-35 138
MsG0580028763.01.T01 AT4G19010 29.206 428 250 16 73 467 150 557 1.22e-34 137
MsG0580028763.01.T01 AT3G48990 29.919 371 227 13 108 466 159 508 8.41e-34 134
MsG0580028763.01.T01 AT5G63380 29.380 371 237 9 109 470 202 556 3.48e-32 129
MsG0580028763.01.T01 AT1G65060 31.148 366 226 11 112 465 206 557 3.98e-32 129
MsG0580028763.01.T01 AT4G05160 29.592 392 234 13 88 461 166 533 5.92e-32 129
MsG0580028763.01.T01 AT3G21230 29.942 344 206 11 109 436 208 532 2.34e-31 127
MsG0580028763.01.T01 AT1G51680 30.270 370 230 11 109 465 200 554 6.71e-31 126
MsG0580028763.01.T01 AT5G38120 29.333 375 222 14 112 467 200 550 1.58e-30 125
MsG0580028763.01.T01 AT1G20480 27.540 374 226 10 112 467 214 560 1.81e-30 125
MsG0580028763.01.T01 AT3G21240 30.000 320 201 10 91 397 174 483 6.92e-30 122
MsG0580028763.01.T01 AT3G21240 30.000 320 201 10 91 397 174 483 6.92e-30 122
MsG0580028763.01.T01 AT1G30520 26.667 390 236 10 112 466 173 547 9.79e-29 119
MsG0580028763.01.T01 AT1G30520 26.667 390 236 10 112 466 173 547 9.79e-29 119
MsG0580028763.01.T01 AT1G62940 30.280 393 239 15 90 465 159 533 5.60e-28 117
MsG0580028763.01.T01 AT1G51680 31.098 328 202 10 109 422 200 517 2.44e-26 112
MsG0580028763.01.T01 AT1G20510 28.333 300 183 10 112 396 190 472 1.79e-25 109
MsG0580028763.01.T01 AT3G21230 29.836 305 183 10 109 397 208 497 2.20e-25 109
MsG0580028763.01.T01 AT5G38120 28.614 339 204 13 112 436 200 514 1.04e-24 107
MsG0580028763.01.T01 AT3G16170 27.249 389 228 16 112 466 235 602 6.36e-24 105
MsG0580028763.01.T01 AT5G36880 26.179 424 261 13 84 468 255 665 1.13e-21 99.0
MsG0580028763.01.T01 AT5G36880 26.179 424 261 13 84 468 255 665 1.13e-21 99.0
MsG0580028763.01.T01 AT5G36880 26.179 424 261 13 84 468 255 665 1.13e-21 99.0
MsG0580028763.01.T01 AT5G36880 26.179 424 261 13 84 468 255 665 1.13e-21 99.0
MsG0580028763.01.T01 AT5G36880 26.179 424 261 13 84 468 305 715 1.30e-21 99.0
MsG0580028763.01.T01 AT1G51680 30.233 301 188 9 109 397 200 490 2.35e-21 97.4
MsG0580028763.01.T01 AT5G38120 29.097 299 178 11 112 396 200 478 4.17e-21 96.3
MsG0580028763.01.T01 AT5G38120 29.097 299 178 11 112 396 200 478 4.17e-21 96.3
MsG0580028763.01.T01 AT1G20510 26.962 293 177 10 112 383 190 466 1.10e-19 92.0
MsG0580028763.01.T01 AT1G30520 25.170 294 180 7 112 380 173 451 1.24e-15 79.7
MsG0580028763.01.T01 AT1G30520 25.170 294 180 7 112 380 173 451 1.24e-15 79.7
MsG0580028763.01.T01 AT1G77590 45.263 95 44 4 315 403 352 444 3.33e-12 68.9
MsG0580028763.01.T01 AT1G77590 45.263 95 44 4 315 403 498 590 3.90e-12 69.3
MsG0580028763.01.T01 AT2G04350 32.927 164 93 6 228 384 449 602 6.04e-11 65.5
MsG0580028763.01.T01 AT2G04350 32.927 164 93 6 228 384 449 602 6.04e-11 65.5

Find 130 sgRNAs with CRISPR-Local

Find 165 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATAAACCCAGTCAAAATT+TGG 0.177147 5:+85977333 None:intergenic
TTTGGTCTTTGATGAGAATA+AGG 0.251554 5:+85977439 None:intergenic
CATAGATAAATCGGTTGTTT+TGG 0.282266 5:+85977183 None:intergenic
TGGCGAGGGAGGATGAGTTT+TGG 0.295270 5:-85976444 MsG0580028763.01.T01:CDS
ATTGGGTCCCACTCTGAGTT+TGG 0.312073 5:+85977312 None:intergenic
CTCCACCGTACTGAAGCTTT+AGG 0.313320 5:-85976913 MsG0580028763.01.T01:CDS
AGAGGTGGTTGTGTTATGTT+AGG 0.319020 5:-85976673 MsG0580028763.01.T01:CDS
GAAGAATTTGCCGCATTATA+TGG 0.322752 5:-85976332 MsG0580028763.01.T01:CDS
TTTCGTATGTTTCAAATGTT+TGG 0.332759 5:+85977421 None:intergenic
GTGCTCCAGCTGTTAAAATA+TGG 0.337925 5:+85976953 None:intergenic
CAAAACAACCGATTTATCTA+TGG 0.342133 5:-85977182 MsG0580028763.01.T01:CDS
TTCAACTTACGAAGATCTAA+TGG 0.345402 5:-85977367 MsG0580028763.01.T01:CDS
ATGTTGTTTCGAAGGAAATA+AGG 0.346423 5:+85977470 None:intergenic
TCCACCGTACTGAAGCTTTA+GGG 0.348758 5:-85976912 MsG0580028763.01.T01:CDS
GATGTCTACGAAAACGAGTT+TGG 0.355936 5:+85977524 None:intergenic
GTTGTACATGGAAGAAGAAA+TGG 0.371428 5:-85976837 MsG0580028763.01.T01:CDS
GGTGAATGAGGCGGCGGTGG+TGG 0.380803 5:-85976464 MsG0580028763.01.T01:CDS
TCAAAAGATGTTATTATTAG+TGG 0.384798 5:-85976541 MsG0580028763.01.T01:CDS
GAAGAAATGGAATTTGTTAC+CGG 0.393279 5:-85976824 MsG0580028763.01.T01:CDS
TGGGAATGAACTACACCTTT+TGG 0.397385 5:+85977255 None:intergenic
TACGAAGATCTAATGGCTTC+CGG 0.397456 5:-85977360 MsG0580028763.01.T01:CDS
TGGAGAACCGCCGCAGGCGG+CGG 0.418559 5:+85976931 None:intergenic
ATGTTACTCAACTACACTTC+CGG 0.423263 5:-85977291 MsG0580028763.01.T01:CDS
GGCGCGTGTTGATGTTGTTA+AGG 0.430348 5:+85977589 None:intergenic
TGAGGCGGCGGTGGTGGCGA+GGG 0.436643 5:-85976458 MsG0580028763.01.T01:CDS
TTACAGTGAGTCATGGTTAC+GGG 0.438402 5:-85976888 MsG0580028763.01.T01:CDS
GGCGGTGAATGAGGCGGCGG+TGG 0.443675 5:-85976467 MsG0580028763.01.T01:CDS
TGGAGCACCGCCGCCTGCGG+CGG 0.446124 5:-85976938 MsG0580028763.01.T01:CDS
AAGAGATATTTGAGTACTGT+AGG 0.450823 5:-85976354 MsG0580028763.01.T01:CDS
GGTAGCGTCCATAGATAAAT+CGG 0.454879 5:+85977174 None:intergenic
TGAAAGAAGGGTTGAAGGAA+AGG 0.463316 5:-85976393 MsG0580028763.01.T01:CDS
AGCTGGAGCACCGCCGCCTG+CGG 0.470098 5:-85976941 MsG0580028763.01.T01:CDS
GATTGGTGGTTTGTTGTACA+TGG 0.470182 5:-85976849 MsG0580028763.01.T01:CDS
ATGAGGCGGCGGTGGTGGCG+AGG 0.474049 5:-85976459 MsG0580028763.01.T01:CDS
TACCTATGTTCCATGCTAAC+GGG 0.476941 5:-85977155 MsG0580028763.01.T01:CDS
GACACACATGTGCGGTGCTC+CGG 0.478003 5:-85977031 MsG0580028763.01.T01:CDS
GAGTTTGAAAGAAGGGTTGA+AGG 0.486977 5:-85976398 MsG0580028763.01.T01:CDS
GAGCTTCCAAAGACTTCTAC+CGG 0.490664 5:-85976283 MsG0580028763.01.T01:CDS
TCAAATATCTCTTTCTCCGT+TGG 0.493592 5:+85976364 None:intergenic
CGGCAAGGAGTGAGAACCCT+AGG 0.499171 5:-85976775 MsG0580028763.01.T01:CDS
AACCTTGCTCTCTCCGTCGC+CGG 0.501709 5:+85976805 None:intergenic
GGAACAACGTCGTCACCAAA+AGG 0.503990 5:-85977270 MsG0580028763.01.T01:CDS
GGTATTTAGAGATTAAAGAT+AGG 0.504970 5:-85976564 MsG0580028763.01.T01:CDS
CTACCTATGTTCCATGCTAA+CGG 0.506459 5:-85977156 MsG0580028763.01.T01:CDS
TTTACAGTGAGTCATGGTTA+CGG 0.507417 5:-85976889 MsG0580028763.01.T01:CDS
GTTTGGATTCGCAGTGGAGG+AGG 0.508080 5:+85977541 None:intergenic
TTAAGGATAGCGCCGGTGAA+GGG 0.521208 5:+85977606 None:intergenic
CACTTCGCCGTCCCCTTCAC+CGG 0.522016 5:-85977618 MsG0580028763.01.T01:CDS
GAGTAGTGTGGAGGTTGAGT+CGG 0.523111 5:-85976506 MsG0580028763.01.T01:CDS
GAAGTGTAGTTGAGTAACAT+TGG 0.523302 5:+85977294 None:intergenic
CATCAACCTTTGTCATCCCT+AGG 0.524830 5:+85976758 None:intergenic
AGAGGTTTATGTTGTTTCGA+AGG 0.524910 5:+85977462 None:intergenic
GCTAACGGAGACAGGTGGAT+TGG 0.526534 5:-85976866 MsG0580028763.01.T01:CDS
GTTAAGGATAGCGCCGGTGA+AGG 0.526761 5:+85977605 None:intergenic
CCAGTCAAAATTTGGATCAC+CGG 0.529442 5:+85977341 None:intergenic
GTGACTGGATGCTTCCTAAG+TGG 0.529827 5:+85976214 None:intergenic
CTAACGGGTGGAGCTTCCCG+TGG 0.532728 5:-85977140 MsG0580028763.01.T01:CDS
GGTGAAGTTGTTATGAGAGG+TGG 0.535576 5:-85976688 MsG0580028763.01.T01:CDS
ATGGAATTTGTTACCGGCGA+CGG 0.536018 5:-85976818 MsG0580028763.01.T01:CDS
AAGTGTAGTTGAGTAACATT+GGG 0.537573 5:+85977295 None:intergenic
CCGTTGATTCATTAATCGAA+TGG 0.538211 5:-85977212 MsG0580028763.01.T01:CDS
TAACGGGTGGAGCTTCCCGT+GGG 0.539163 5:-85977139 MsG0580028763.01.T01:CDS
GGCGGCGGTGGTGGCGAGGG+AGG 0.539718 5:-85976455 MsG0580028763.01.T01:CDS
TGGACATCCGGCGGTGAATG+AGG 0.540160 5:-85976476 MsG0580028763.01.T01:CDS
GAAAGAAGGGTTGAAGGAAA+GGG 0.546935 5:-85976392 MsG0580028763.01.T01:CDS
GGTTACGGGCTAACGGAGAC+AGG 0.552343 5:-85976874 MsG0580028763.01.T01:CDS
GGAAGCTCCACCCGTTAGCA+TGG 0.553881 5:+85977145 None:intergenic
AACGGAGACAGGTGGATTGG+TGG 0.554790 5:-85976863 MsG0580028763.01.T01:CDS
TCCGGCGGTGAATGAGGCGG+CGG 0.555212 5:-85976470 MsG0580028763.01.T01:CDS
GTAGGTGTAATGCATGAAGA+TGG 0.563846 5:-85976586 MsG0580028763.01.T01:CDS
GAGGTGGTTGTGTTATGTTA+GGG 0.565042 5:-85976672 MsG0580028763.01.T01:CDS
GATGACAAAGGTTGATGTAG+TGG 0.565684 5:-85976752 MsG0580028763.01.T01:CDS
GGATTCGCAGTGGAGGAGGA+TGG 0.567405 5:+85977545 None:intergenic
AAAGATGTTATTATTAGTGG+TGG 0.569732 5:-85976538 MsG0580028763.01.T01:CDS
ATCAACCTTTGTCATCCCTA+GGG 0.569958 5:+85976759 None:intergenic
CGAGTTTGGATTCGCAGTGG+AGG 0.571371 5:+85977538 None:intergenic
TTAGGGTTTACAGTGAGTCA+TGG 0.572267 5:-85976895 MsG0580028763.01.T01:CDS
AAACGAGATGGAGTAACGCT+TGG 0.572828 5:-85976709 MsG0580028763.01.T01:CDS
ACACATGTGCGGTGCTCCGG+TGG 0.575801 5:-85977028 MsG0580028763.01.T01:CDS
GGCGAAGTGGAGTTCATACA+TGG 0.576977 5:+85977632 None:intergenic
GAGTCATGGTTACGGGCTAA+CGG 0.578018 5:-85976881 MsG0580028763.01.T01:CDS
TACCGGCGACGGAGAGAGCA+AGG 0.581383 5:-85976807 MsG0580028763.01.T01:CDS
ACGGGTGGAGCTTCCCGTGG+GGG 0.582132 5:-85977137 MsG0580028763.01.T01:CDS
GGTGAGAGTGTAAAACGAGA+TGG 0.588528 5:-85976721 MsG0580028763.01.T01:CDS
CTAAGGACATGGGACCACTT+AGG 0.591204 5:-85976228 MsG0580028763.01.T01:CDS
TGGTGAGAATTTGAGTAGTG+TGG 0.591809 5:-85976518 MsG0580028763.01.T01:CDS
AGGATAAAGCTTGAAGAACA+AGG 0.592881 5:+85977490 None:intergenic
GATAGCGCCGGTGAAGGGGA+CGG 0.593787 5:+85977611 None:intergenic
GTTAACATATTAAGAACCAC+CGG 0.594824 5:+85977012 None:intergenic
CGGTGGAGAACCGCCGCAGG+CGG 0.595171 5:+85976928 None:intergenic
TAGGTGTAATGCATGAAGAT+GGG 0.598284 5:-85976585 MsG0580028763.01.T01:CDS
GTACGGTGGAGAACCGCCGC+AGG 0.600346 5:+85976925 None:intergenic
AGAGAGCAAGGTTGAAGTCA+CGG 0.602793 5:-85976795 MsG0580028763.01.T01:CDS
TGGAGATGATACGCGCGTCA+AGG 0.606851 5:+85977568 None:intergenic
TAAGGATAGCGCCGGTGAAG+GGG 0.606863 5:+85977607 None:intergenic
ATGACAAAGGTTGATGTAGT+GGG 0.607697 5:-85976751 MsG0580028763.01.T01:CDS
CCATTCGATTAATGAATCAA+CGG 0.609075 5:+85977212 None:intergenic
AACGGGTGGAGCTTCCCGTG+GGG 0.610896 5:-85977138 MsG0580028763.01.T01:CDS
CGGTGAAGGGGACGGCGAAG+TGG 0.613496 5:+85977619 None:intergenic
GGTTTATCCAAACTCAGAGT+GGG 0.624443 5:-85977319 MsG0580028763.01.T01:CDS
TTCGCAGTGGAGGAGGATGG+TGG 0.625201 5:+85977548 None:intergenic
ACCGCCGCCTCATTCACCGC+CGG 0.626771 5:+85976469 None:intergenic
GATGTTGTTAAGGATAGCGC+CGG 0.631854 5:+85977599 None:intergenic
CACCCGTTAGCATGGAACAT+AGG 0.633645 5:+85977153 None:intergenic
CTATGTTCCATGCTAACGGG+TGG 0.634027 5:-85977152 MsG0580028763.01.T01:CDS
GTAAGTTGAAATGAAATCAA+CGG 0.634142 5:+85977380 None:intergenic
GGGTATTTGAAAGATAGTGA+AGG 0.636873 5:-85976652 MsG0580028763.01.T01:CDS
GCAAGGTTGAAGTCACGGCA+AGG 0.639269 5:-85976790 MsG0580028763.01.T01:CDS
CGGTTATGATGAAAGTTCCA+CGG 0.640554 5:+85977232 None:intergenic
TATGATGAAAGTTCCACGGT+GGG 0.641675 5:+85977236 None:intergenic
TTCAAACTCACAAAAGCACA+CGG 0.644342 5:+85976412 None:intergenic
ACATCCGGCGGTGAATGAGG+CGG 0.646521 5:-85976473 MsG0580028763.01.T01:CDS
ACCCTAAAGCTTCAGTACGG+TGG 0.647704 5:+85976911 None:intergenic
AGCTTCCAAAGACTTCTACC+GGG 0.648071 5:-85976282 MsG0580028763.01.T01:CDS
AAACGAGTTTGGATTCGCAG+TGG 0.650226 5:+85977535 None:intergenic
TAAACCCTAAAGCTTCAGTA+CGG 0.654658 5:+85976908 None:intergenic
CTTGGTGAAGTTGTTATGAG+AGG 0.659010 5:-85976691 MsG0580028763.01.T01:CDS
GGGTTTATCCAAACTCAGAG+TGG 0.661044 5:-85977320 MsG0580028763.01.T01:CDS
GGCAAGGAGTGAGAACCCTA+GGG 0.664706 5:-85976774 MsG0580028763.01.T01:CDS
GAAGGAAAGGGATATACCAA+CGG 0.665980 5:-85976380 MsG0580028763.01.T01:CDS
TTGAAGAACAAGGTCACGTG+CGG 0.669921 5:+85977500 None:intergenic
TACGGGCTAACGGAGACAGG+TGG 0.672763 5:-85976871 MsG0580028763.01.T01:CDS
TGAGAATTTGAGTAGTGTGG+AGG 0.682689 5:-85976515 MsG0580028763.01.T01:CDS
CATCACGTGACACACATGTG+CGG 0.688035 5:-85977039 MsG0580028763.01.T01:CDS
TCTTTGATGAGAATAAGGAG+AGG 0.708659 5:+85977444 None:intergenic
GAGAACCCTAGGGATGACAA+AGG 0.708804 5:-85976764 MsG0580028763.01.T01:CDS
GGTGTAGTTCATTCCCACCG+TGG 0.733199 5:-85977249 MsG0580028763.01.T01:CDS
AGTTGAAATGAAATCAACGG+CGG 0.744682 5:+85977383 None:intergenic
GTTGATGTAGTGGGTCCCAG+TGG 0.749534 5:-85976742 MsG0580028763.01.T01:CDS
TTATGATGAAAGTTCCACGG+TGG 0.773430 5:+85977235 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCAAAAGATGTTATTATTAG+TGG - Chr5:85977287-85977306 MsG0580028763.01.T01:CDS 20.0%
!!! AACAAAGAATTGTTTTAAGA+AGG - Chr5:85977199-85977218 MsG0580028763.01.T01:CDS 20.0%
!!! ACAAAGAATTGTTTTAAGAA+GGG - Chr5:85977200-85977219 MsG0580028763.01.T01:CDS 20.0%
! AAAGATGTTATTATTAGTGG+TGG - Chr5:85977290-85977309 MsG0580028763.01.T01:CDS 25.0%
! GGTATTTAGAGATTAAAGAT+AGG - Chr5:85977264-85977283 MsG0580028763.01.T01:CDS 25.0%
! TGTACTTAGAAAAATTGCTA+AGG - Chr5:85977583-85977602 MsG0580028763.01.T01:CDS 25.0%
! TTTCGTATGTTTCAAATGTT+TGG + Chr5:85976410-85976429 None:intergenic 25.0%
!! GTAAGTTGAAATGAAATCAA+CGG + Chr5:85976451-85976470 None:intergenic 25.0%
AAGTGTAGTTGAGTAACATT+GGG + Chr5:85976536-85976555 None:intergenic 30.0%
AGAAAAATTGCTAAGGACAT+GGG - Chr5:85977590-85977609 MsG0580028763.01.T01:CDS 30.0%
CCATTCGATTAATGAATCAA+CGG + Chr5:85976619-85976638 None:intergenic 30.0%
GCATTATATGGTTCCAAAAA+CGG - Chr5:85977508-85977527 MsG0580028763.01.T01:CDS 30.0%
GTTAACATATTAAGAACCAC+CGG + Chr5:85976819-85976838 None:intergenic 30.0%
TAGAAAAATTGCTAAGGACA+TGG - Chr5:85977589-85977608 MsG0580028763.01.T01:CDS 30.0%
TTCAACTTACGAAGATCTAA+TGG - Chr5:85976461-85976480 MsG0580028763.01.T01:CDS 30.0%
! AAGAGATATTTGAGTACTGT+AGG - Chr5:85977474-85977493 MsG0580028763.01.T01:CDS 30.0%
! CAAAACAACCGATTTATCTA+TGG - Chr5:85976646-85976665 MsG0580028763.01.T01:CDS 30.0%
! CATAGATAAATCGGTTGTTT+TGG + Chr5:85976648-85976667 None:intergenic 30.0%
! CTTTTGTGAGTTTGAAAGAA+GGG - Chr5:85977423-85977442 MsG0580028763.01.T01:CDS 30.0%
! TACAAACTTCTGAATTTTCC+CGG + Chr5:85977567-85977586 None:intergenic 30.0%
! TTTGGTCTTTGATGAGAATA+AGG + Chr5:85976392-85976411 None:intergenic 30.0%
! TTTTGCAACGGTTTATTATC+AGG + Chr5:85976849-85976868 None:intergenic 30.0%
!! ATGTTGTTTCGAAGGAAATA+AGG + Chr5:85976361-85976380 None:intergenic 30.0%
!! GAAGAAATGGAATTTGTTAC+CGG - Chr5:85977004-85977023 MsG0580028763.01.T01:CDS 30.0%
!!! AGAATTGTTTTAAGAAGGGT+TGG - Chr5:85977204-85977223 MsG0580028763.01.T01:CDS 30.0%
!!! ATATGGACAGTTTTTTGCAA+CGG + Chr5:85976861-85976880 None:intergenic 30.0%
!!! GTTTTTGGAACCATATAATG+CGG + Chr5:85977509-85977528 None:intergenic 30.0%
AGGATAAAGCTTGAAGAACA+AGG + Chr5:85976341-85976360 None:intergenic 35.0%
AGTTGAAATGAAATCAACGG+CGG + Chr5:85976448-85976467 None:intergenic 35.0%
ATGTTACTCAACTACACTTC+CGG - Chr5:85976537-85976556 MsG0580028763.01.T01:CDS 35.0%
GAAGAATTTGCCGCATTATA+TGG - Chr5:85977496-85977515 MsG0580028763.01.T01:CDS 35.0%
GAAGTGTAGTTGAGTAACAT+TGG + Chr5:85976537-85976556 None:intergenic 35.0%
GGATAAACCCAGTCAAAATT+TGG + Chr5:85976498-85976517 None:intergenic 35.0%
GGGTATTTGAAAGATAGTGA+AGG - Chr5:85977176-85977195 MsG0580028763.01.T01:CDS 35.0%
GTTGTACATGGAAGAAGAAA+TGG - Chr5:85976991-85977010 MsG0580028763.01.T01:CDS 35.0%
TAAACCCTAAAGCTTCAGTA+CGG + Chr5:85976923-85976942 None:intergenic 35.0%
TAGGTGTAATGCATGAAGAT+GGG - Chr5:85977243-85977262 MsG0580028763.01.T01:CDS 35.0%
TCAAATATCTCTTTCTCCGT+TGG + Chr5:85977467-85977486 None:intergenic 35.0%
TCTTTGATGAGAATAAGGAG+AGG + Chr5:85976387-85976406 None:intergenic 35.0%
TTATATGGTTCCAAAAACGG+TGG - Chr5:85977511-85977530 MsG0580028763.01.T01:CDS 35.0%
TTTACAGTGAGTCATGGTTA+CGG - Chr5:85976939-85976958 MsG0580028763.01.T01:CDS 35.0%
! GCTTTTGTGAGTTTGAAAGA+AGG - Chr5:85977422-85977441 MsG0580028763.01.T01:CDS 35.0%
! TCTTTAAACACCACCGTTTT+TGG + Chr5:85977524-85977543 None:intergenic 35.0%
! TTCAAACTCACAAAAGCACA+CGG + Chr5:85977419-85977438 None:intergenic 35.0%
!! AGAGGTTTATGTTGTTTCGA+AGG + Chr5:85976369-85976388 None:intergenic 35.0%
!! ATGACAAAGGTTGATGTAGT+GGG - Chr5:85977077-85977096 MsG0580028763.01.T01:CDS 35.0%
!! CCGTTGATTCATTAATCGAA+TGG - Chr5:85976616-85976635 MsG0580028763.01.T01:CDS 35.0%
!!! ACTGTCCATATTTTAACAGC+TGG - Chr5:85976870-85976889 MsG0580028763.01.T01:CDS 35.0%
AGAGGTGGTTGTGTTATGTT+AGG - Chr5:85977155-85977174 MsG0580028763.01.T01:CDS 40.0%
ATCAACCTTTGTCATCCCTA+GGG + Chr5:85977072-85977091 None:intergenic 40.0%
CCAGTCAAAATTTGGATCAC+CGG + Chr5:85976490-85976509 None:intergenic 40.0%
CGGTTATGATGAAAGTTCCA+CGG + Chr5:85976599-85976618 None:intergenic 40.0%
CTACCTATGTTCCATGCTAA+CGG - Chr5:85976672-85976691 MsG0580028763.01.T01:CDS 40.0%
CTTGGTGAAGTTGTTATGAG+AGG - Chr5:85977137-85977156 MsG0580028763.01.T01:CDS 40.0%
GAAAGAAGGGTTGAAGGAAA+GGG - Chr5:85977436-85977455 MsG0580028763.01.T01:CDS 40.0%
GAAGGAAAGGGATATACCAA+CGG - Chr5:85977448-85977467 MsG0580028763.01.T01:CDS 40.0%
GAGGTGGTTGTGTTATGTTA+GGG - Chr5:85977156-85977175 MsG0580028763.01.T01:CDS 40.0%
GAGTTTGAAAGAAGGGTTGA+AGG - Chr5:85977430-85977449 MsG0580028763.01.T01:CDS 40.0%
GATGTCTACGAAAACGAGTT+TGG + Chr5:85976307-85976326 None:intergenic 40.0%
GGTAGCGTCCATAGATAAAT+CGG + Chr5:85976657-85976676 None:intergenic 40.0%
GGTTTATCCAAACTCAGAGT+GGG - Chr5:85976509-85976528 MsG0580028763.01.T01:CDS 40.0%
GTAGGTGTAATGCATGAAGA+TGG - Chr5:85977242-85977261 MsG0580028763.01.T01:CDS 40.0%
GTGCTCCAGCTGTTAAAATA+TGG + Chr5:85976878-85976897 None:intergenic 40.0%
TACCTATGTTCCATGCTAAC+GGG - Chr5:85976673-85976692 MsG0580028763.01.T01:CDS 40.0%
TACGAAGATCTAATGGCTTC+CGG - Chr5:85976468-85976487 MsG0580028763.01.T01:CDS 40.0%
TATGATGAAAGTTCCACGGT+GGG + Chr5:85976595-85976614 None:intergenic 40.0%
TGAAAGAAGGGTTGAAGGAA+AGG - Chr5:85977435-85977454 MsG0580028763.01.T01:CDS 40.0%
TGAGAATTTGAGTAGTGTGG+AGG - Chr5:85977313-85977332 MsG0580028763.01.T01:CDS 40.0%
TGGTGAGAATTTGAGTAGTG+TGG - Chr5:85977310-85977329 MsG0580028763.01.T01:CDS 40.0%
TTACAGTGAGTCATGGTTAC+GGG - Chr5:85976940-85976959 MsG0580028763.01.T01:CDS 40.0%
TTAGGGTTTACAGTGAGTCA+TGG - Chr5:85976933-85976952 MsG0580028763.01.T01:CDS 40.0%
TTATGATGAAAGTTCCACGG+TGG + Chr5:85976596-85976615 None:intergenic 40.0%
! ATTTTCCCGGTAGAAGTCTT+TGG + Chr5:85977554-85977573 None:intergenic 40.0%
! CACATACGACTTTTTGTGAC+TGG + Chr5:85977632-85977651 None:intergenic 40.0%
! TGGGAATGAACTACACCTTT+TGG + Chr5:85976576-85976595 None:intergenic 40.0%
!! GATGACAAAGGTTGATGTAG+TGG - Chr5:85977076-85977095 MsG0580028763.01.T01:CDS 40.0%
!! GATTGGTGGTTTGTTGTACA+TGG - Chr5:85976979-85976998 MsG0580028763.01.T01:CDS 40.0%
!! TGGTTTTACACTGGTGATGT+AGG - Chr5:85977224-85977243 MsG0580028763.01.T01:CDS 40.0%
!!! AAGAAGGGTTGGTTTTACAC+TGG - Chr5:85977215-85977234 MsG0580028763.01.T01:CDS 40.0%
!!! CGGTGATCCAAATTTTGACT+GGG - Chr5:85976488-85976507 MsG0580028763.01.T01:CDS 40.0%
AAACGAGATGGAGTAACGCT+TGG - Chr5:85977119-85977138 MsG0580028763.01.T01:CDS 45.0%
AAACGAGTTTGGATTCGCAG+TGG + Chr5:85976296-85976315 None:intergenic 45.0%
AGAGAGCAAGGTTGAAGTCA+CGG - Chr5:85977033-85977052 MsG0580028763.01.T01:CDS 45.0%
AGCTTCCAAAGACTTCTACC+GGG - Chr5:85977546-85977565 MsG0580028763.01.T01:CDS 45.0%
CATCAACCTTTGTCATCCCT+AGG + Chr5:85977073-85977092 None:intergenic 45.0%
GAGCTTCCAAAGACTTCTAC+CGG - Chr5:85977545-85977564 MsG0580028763.01.T01:CDS 45.0%
GATGTTGTTAAGGATAGCGC+CGG + Chr5:85976232-85976251 None:intergenic 45.0%
GGGTTTATCCAAACTCAGAG+TGG - Chr5:85976508-85976527 MsG0580028763.01.T01:CDS 45.0%
GGTGAAGTTGTTATGAGAGG+TGG - Chr5:85977140-85977159 MsG0580028763.01.T01:CDS 45.0%
TCCACCGTACTGAAGCTTTA+GGG - Chr5:85976916-85976935 MsG0580028763.01.T01:CDS 45.0%
TTGAAGAACAAGGTCACGTG+CGG + Chr5:85976331-85976350 None:intergenic 45.0%
! CGTTTTACACTCTCACCACT+GGG + Chr5:85977104-85977123 None:intergenic 45.0%
! GGTGAGAGTGTAAAACGAGA+TGG - Chr5:85977107-85977126 MsG0580028763.01.T01:CDS 45.0%
! TCGTTTTACACTCTCACCAC+TGG + Chr5:85977105-85977124 None:intergenic 45.0%
!! ATGGAATTTGTTACCGGCGA+CGG - Chr5:85977010-85977029 MsG0580028763.01.T01:CDS 45.0%
!! CCGGTGATCCAAATTTTGAC+TGG - Chr5:85976487-85976506 MsG0580028763.01.T01:CDS 45.0%
!! GAGGTTGAGTCGGTTTTGTA+TGG - Chr5:85977332-85977351 MsG0580028763.01.T01:CDS 45.0%
!! GTCGGTTTTGTATGGACATC+CGG - Chr5:85977340-85977359 MsG0580028763.01.T01:CDS 45.0%
!!! TTTTGGTGACGACGTTGTTC+CGG + Chr5:85976559-85976578 None:intergenic 45.0%
ACCCTAAAGCTTCAGTACGG+TGG + Chr5:85976920-85976939 None:intergenic 50.0%
ATTGGGTCCCACTCTGAGTT+TGG + Chr5:85976519-85976538 None:intergenic 50.0%
CACCCGTTAGCATGGAACAT+AGG + Chr5:85976678-85976697 None:intergenic 50.0%
CATCACGTGACACACATGTG+CGG - Chr5:85976789-85976808 MsG0580028763.01.T01:CDS 50.0%
CTAAGGACATGGGACCACTT+AGG - Chr5:85977600-85977619 MsG0580028763.01.T01:CDS 50.0%
CTATGTTCCATGCTAACGGG+TGG - Chr5:85976676-85976695 MsG0580028763.01.T01:CDS 50.0%
CTCCACCGTACTGAAGCTTT+AGG - Chr5:85976915-85976934 MsG0580028763.01.T01:CDS 50.0%
GAGAACCCTAGGGATGACAA+AGG - Chr5:85977064-85977083 MsG0580028763.01.T01:CDS 50.0%
GAGTAGTGTGGAGGTTGAGT+CGG - Chr5:85977322-85977341 MsG0580028763.01.T01:CDS 50.0%
GGAACAACGTCGTCACCAAA+AGG - Chr5:85976558-85976577 MsG0580028763.01.T01:CDS 50.0%
GTGACTGGATGCTTCCTAAG+TGG + Chr5:85977617-85977636 None:intergenic 50.0%
! GAGTCATGGTTACGGGCTAA+CGG - Chr5:85976947-85976966 MsG0580028763.01.T01:CDS 50.0%
! GGCGCGTGTTGATGTTGTTA+AGG + Chr5:85976242-85976261 None:intergenic 50.0%
!! GGTTTTGTATGGACATCCGG+CGG - Chr5:85977343-85977362 MsG0580028763.01.T01:CDS 50.0%
!! TTAAGGATAGCGCCGGTGAA+GGG + Chr5:85976225-85976244 None:intergenic 50.0%
CGAGTTTGGATTCGCAGTGG+AGG + Chr5:85976293-85976312 None:intergenic 55.0%
GCAAGGTTGAAGTCACGGCA+AGG - Chr5:85977038-85977057 MsG0580028763.01.T01:CDS 55.0%
GCTAACGGAGACAGGTGGAT+TGG - Chr5:85976962-85976981 MsG0580028763.01.T01:CDS 55.0%
GGCAAGGAGTGAGAACCCTA+GGG - Chr5:85977054-85977073 MsG0580028763.01.T01:CDS 55.0%
GGTGTAGTTCATTCCCACCG+TGG - Chr5:85976579-85976598 MsG0580028763.01.T01:CDS 55.0%
GTTTGGATTCGCAGTGGAGG+AGG + Chr5:85976290-85976309 None:intergenic 55.0%
TGGAGATGATACGCGCGTCA+AGG + Chr5:85976263-85976282 None:intergenic 55.0%
! GCGAGGGAGGATGAGTTTTG+GGG - Chr5:85977386-85977405 MsG0580028763.01.T01:CDS 55.0%
! GGCGAGGGAGGATGAGTTTT+GGG - Chr5:85977385-85977404 MsG0580028763.01.T01:CDS 55.0%
! TGGCGAGGGAGGATGAGTTT+TGG - Chr5:85977384-85977403 MsG0580028763.01.T01:CDS 55.0%
!! AACGGAGACAGGTGGATTGG+TGG - Chr5:85976965-85976984 MsG0580028763.01.T01:CDS 55.0%
!! CGAGGGAGGATGAGTTTTGG+GGG - Chr5:85977387-85977406 MsG0580028763.01.T01:CDS 55.0%
!! GTTAAGGATAGCGCCGGTGA+AGG + Chr5:85976226-85976245 None:intergenic 55.0%
!! GTTGATGTAGTGGGTCCCAG+TGG - Chr5:85977086-85977105 MsG0580028763.01.T01:CDS 55.0%
!! TAAGGATAGCGCCGGTGAAG+GGG + Chr5:85976224-85976243 None:intergenic 55.0%
!!! GAGGGAGGATGAGTTTTGGG+GGG - Chr5:85977388-85977407 MsG0580028763.01.T01:CDS 55.0%
AACCTTGCTCTCTCCGTCGC+CGG + Chr5:85977026-85977045 None:intergenic 60.0%
ACATCCGGCGGTGAATGAGG+CGG - Chr5:85977355-85977374 MsG0580028763.01.T01:CDS 60.0%
CAACAGCTGCAATCCCCCAC+GGG + Chr5:85976707-85976726 None:intergenic 60.0%
CCAACAGCTGCAATCCCCCA+CGG + Chr5:85976708-85976727 None:intergenic 60.0%
CGGCAAGGAGTGAGAACCCT+AGG - Chr5:85977053-85977072 MsG0580028763.01.T01:CDS 60.0%
GACACACATGTGCGGTGCTC+CGG - Chr5:85976797-85976816 MsG0580028763.01.T01:CDS 60.0%
GGAAGCTCCACCCGTTAGCA+TGG + Chr5:85976686-85976705 None:intergenic 60.0%
GGATTCGCAGTGGAGGAGGA+TGG + Chr5:85976286-85976305 None:intergenic 60.0%
TGGACATCCGGCGGTGAATG+AGG - Chr5:85977352-85977371 MsG0580028763.01.T01:CDS 60.0%
TGGGGGATTGCAGCTGTTGG+TGG - Chr5:85976708-85976727 MsG0580028763.01.T01:CDS 60.0%
TTCGCAGTGGAGGAGGATGG+TGG + Chr5:85976283-85976302 None:intergenic 60.0%
! GGTTACGGGCTAACGGAGAC+AGG - Chr5:85976954-85976973 MsG0580028763.01.T01:CDS 60.0%
! TAACGGGTGGAGCTTCCCGT+GGG - Chr5:85976689-85976708 MsG0580028763.01.T01:CDS 60.0%
! TACGGGCTAACGGAGACAGG+TGG - Chr5:85976957-85976976 MsG0580028763.01.T01:CDS 60.0%
AACGGGTGGAGCTTCCCGTG+GGG - Chr5:85976690-85976709 MsG0580028763.01.T01:CDS 65.0%
ACACATGTGCGGTGCTCCGG+TGG - Chr5:85976800-85976819 MsG0580028763.01.T01:CDS 65.0%
CACTTCGCCGTCCCCTTCAC+CGG - Chr5:85976210-85976229 MsG0580028763.01.T01:CDS 65.0%
CCGTGGGGGATTGCAGCTGT+TGG - Chr5:85976705-85976724 MsG0580028763.01.T01:CDS 65.0%
TACCGGCGACGGAGAGAGCA+AGG - Chr5:85977021-85977040 MsG0580028763.01.T01:CDS 65.0%
! CTAACGGGTGGAGCTTCCCG+TGG - Chr5:85976688-85976707 MsG0580028763.01.T01:CDS 65.0%
!! GATAGCGCCGGTGAAGGGGA+CGG + Chr5:85976220-85976239 None:intergenic 65.0%
ACCGCCGCCTCATTCACCGC+CGG + Chr5:85977362-85977381 None:intergenic 70.0%
ACGGGTGGAGCTTCCCGTGG+GGG - Chr5:85976691-85976710 MsG0580028763.01.T01:CDS 70.0%
CGGTGAAGGGGACGGCGAAG+TGG + Chr5:85976212-85976231 None:intergenic 70.0%
GGTGAATGAGGCGGCGGTGG+TGG - Chr5:85977364-85977383 MsG0580028763.01.T01:CDS 70.0%
GTACGGTGGAGAACCGCCGC+AGG + Chr5:85976906-85976925 None:intergenic 70.0%
TCCGGCGGTGAATGAGGCGG+CGG - Chr5:85977358-85977377 MsG0580028763.01.T01:CDS 70.0%
CGGTGGAGAACCGCCGCAGG+CGG + Chr5:85976903-85976922 None:intergenic 75.0%
GGCGGTGAATGAGGCGGCGG+TGG - Chr5:85977361-85977380 MsG0580028763.01.T01:CDS 75.0%
TGGAGAACCGCCGCAGGCGG+CGG + Chr5:85976900-85976919 None:intergenic 75.0%
! ATGAGGCGGCGGTGGTGGCG+AGG - Chr5:85977369-85977388 MsG0580028763.01.T01:CDS 75.0%
! TGAGGCGGCGGTGGTGGCGA+GGG - Chr5:85977370-85977389 MsG0580028763.01.T01:CDS 75.0%
!! AGCTGGAGCACCGCCGCCTG+CGG - Chr5:85976887-85976906 MsG0580028763.01.T01:CDS 75.0%
!!! TGGAGCACCGCCGCCTGCGG+CGG - Chr5:85976890-85976909 MsG0580028763.01.T01:CDS 80.0%
!! GGCGGCGGTGGTGGCGAGGG+AGG - Chr5:85977373-85977392 MsG0580028763.01.T01:CDS 85.0%
Chromosome Type Strat End Strand Name
Chr5 gene 85976198 85977652 85976198 ID=MsG0580028763.01;Name=MsG0580028763.01
Chr5 mRNA 85976198 85977652 85976198 ID=MsG0580028763.01.T01;Parent=MsG0580028763.01;Name=MsG0580028763.01.T01;_AED=0.24;_eAED=0.24;_QI=0|-1|0|1|-1|1|1|0|484
Chr5 exon 85976198 85977652 85976198 ID=MsG0580028763.01.T01:exon:21627;Parent=MsG0580028763.01.T01
Chr5 CDS 85976198 85977652 85976198 ID=MsG0580028763.01.T01:cds;Parent=MsG0580028763.01.T01
Gene Sequence

>MsG0580028763.01.T01

ATGTATGAACTCCACTTCGCCGTCCCCTTCACCGGCGCTATCCTTAACAACATCAACACGCGCCTTGACGCGCGTATCATCTCCACCATCCTCCTCCACTGCGAATCCAAACTCGTTTTCGTAGACATCGCCGCACGTGACCTTGTTCTTCAAGCTTTATCCTTATTTCCTTCGAAACAACATAAACCTCTCCTTATTCTCATCAAAGACCAAACATTTGAAACATACGAAAATGTTTCTTCATCTTCCGCCGTTGATTTCATTTCAACTTACGAAGATCTAATGGCTTCCGGTGATCCAAATTTTGACTGGGTTTATCCAAACTCAGAGTGGGACCCAATGTTACTCAACTACACTTCCGGAACAACGTCGTCACCAAAAGGTGTAGTTCATTCCCACCGTGGAACTTTCATCATAACCGTTGATTCATTAATCGAATGGACTGTTCCAAAACAACCGATTTATCTATGGACGCTACCTATGTTCCATGCTAACGGGTGGAGCTTCCCGTGGGGGATTGCAGCTGTTGGTGGAACAAACATCTGTGTAAGAAAATTCGACGCTGAAATCGTTTTTTCTCTCATCAGAAAACATCACGTGACACACATGTGCGGTGCTCCGGTGGTTCTTAATATGTTAACTAACTCACCTGATAATAAACCGTTGCAAAAAACTGTCCATATTTTAACAGCTGGAGCACCGCCGCCTGCGGCGGTTCTCCACCGTACTGAAGCTTTAGGGTTTACAGTGAGTCATGGTTACGGGCTAACGGAGACAGGTGGATTGGTGGTTTGTTGTACATGGAAGAAGAAATGGAATTTGTTACCGGCGACGGAGAGAGCAAGGTTGAAGTCACGGCAAGGAGTGAGAACCCTAGGGATGACAAAGGTTGATGTAGTGGGTCCCAGTGGTGAGAGTGTAAAACGAGATGGAGTAACGCTTGGTGAAGTTGTTATGAGAGGTGGTTGTGTTATGTTAGGGTATTTGAAAGATAGTGAAGGAACAAAGAATTGTTTTAAGAAGGGTTGGTTTTACACTGGTGATGTAGGTGTAATGCATGAAGATGGGTATTTAGAGATTAAAGATAGGTCAAAAGATGTTATTATTAGTGGTGGTGAGAATTTGAGTAGTGTGGAGGTTGAGTCGGTTTTGTATGGACATCCGGCGGTGAATGAGGCGGCGGTGGTGGCGAGGGAGGATGAGTTTTGGGGGGAGACACCGTGTGCTTTTGTGAGTTTGAAAGAAGGGTTGAAGGAAAGGGATATACCAACGGAGAAAGAGATATTTGAGTACTGTAGGAAGAATTTGCCGCATTATATGGTTCCAAAAACGGTGGTGTTTAAAGATGAGCTTCCAAAGACTTCTACCGGGAAAATTCAGAAGTTTGTACTTAGAAAAATTGCTAAGGACATGGGACCACTTAGGAAGCATCCAGTCACAAAAAGTCGTATGTGA
Protein sequence

>MsG0580028763.01.T01

MYELHFAVPFTGAILNNINTRLDARIISTILLHCESKLVFVDIAARDLVLQALSLFPSKQHKPLLILIKDQTFETYENVSSSSAVDFISTYEDLMASGDPNFDWVYPNSEWDPMLLNYTSGTTSSPKGVVHSHRGTFIITVDSLIEWTVPKQPIYLWTLPMFHANGWSFPWGIAAVGGTNICVRKFDAEIVFSLIRKHHVTHMCGAPVVLNMLTNSPDNKPLQKTVHILTAGAPPPAAVLHRTEALGFTVSHGYGLTETGGLVVCCTWKKKWNLLPATERARLKSRQGVRTLGMTKVDVVGPSGESVKRDGVTLGEVVMRGGCVMLGYLKDSEGTKNCFKKGWFYTGDVGVMHEDGYLEIKDRSKDVIISGGENLSSVEVESVLYGHPAVNEAAVVAREDEFWGETPCAFVSLKEGLKERDIPTEKEIFEYCRKNLPHYMVPKTVVFKDELPKTSTGKIQKFVLRKIAKDMGPLRKHPVTKSRM*