AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028670.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028670.01.T01 MTR_5g076240 97.342 489 9 2 1 488 77 562 0.0 983
MsG0580028670.01.T01 MTR_5g076220 65.546 476 160 2 1 475 77 549 0.0 681
MsG0580028670.01.T01 MTR_5g076200 64.644 478 165 2 1 477 77 551 0.0 672
MsG0580028670.01.T01 MTR_0161s0050 64.509 479 162 3 1 475 77 551 0.0 646
MsG0580028670.01.T01 MTR_8g074040 50.620 484 216 7 1 477 1 468 1.71e-174 499
MsG0580028670.01.T01 MTR_8g074040 50.620 484 216 7 1 477 119 586 1.28e-172 499
MsG0580028670.01.T01 MTR_3g064420 51.959 485 210 6 1 472 77 551 1.97e-171 495
MsG0580028670.01.T01 MTR_5g008800 51.967 483 213 7 1 479 77 544 2.58e-171 494
MsG0580028670.01.T01 MTR_8g074120 50.000 484 219 8 1 477 30 497 6.58e-170 489
MsG0580028670.01.T01 MTR_5g008820 49.583 480 225 6 2 479 78 542 3.88e-164 475
MsG0580028670.01.T01 MTR_4g121600 47.737 486 240 6 1 478 83 562 2.19e-162 471
MsG0580028670.01.T01 MTR_2g044180 47.531 486 235 7 1 475 83 559 9.24e-159 462
MsG0580028670.01.T01 MTR_2g044180 47.170 477 232 7 10 475 1 468 3.61e-154 447
MsG0580028670.01.T01 MTR_5g023730 40.000 480 266 10 2 475 81 544 1.14e-114 349
MsG0580028670.01.T01 MTR_0803s0020 30.832 493 296 14 3 480 300 762 8.59e-52 189
MsG0580028670.01.T01 MTR_1569s0010 32.970 367 213 10 115 468 182 528 2.14e-44 164
MsG0580028670.01.T01 MTR_4g077900 33.058 363 210 12 121 468 127 471 1.95e-43 160
MsG0580028670.01.T01 MTR_2g105570 32.425 367 221 11 115 468 190 542 2.04e-43 161
MsG0580028670.01.T01 MTR_5g027480 32.283 381 223 13 106 468 185 548 7.95e-41 154
MsG0580028670.01.T01 MTR_5g027500 30.623 369 211 12 121 468 217 561 2.63e-39 150
MsG0580028670.01.T01 MTR_4g128337 32.982 379 210 15 108 469 187 538 1.26e-36 142
MsG0580028670.01.T01 MTR_2g095510 28.642 405 245 12 79 464 149 528 3.52e-36 141
MsG0580028670.01.T01 MTR_3g035130 30.831 373 225 16 111 473 160 509 9.37e-35 136
MsG0580028670.01.T01 MTR_4g005750 29.676 401 254 12 82 468 149 535 6.60e-34 134
MsG0580028670.01.T01 MTR_3g460770 29.902 408 248 15 97 487 165 551 6.64e-34 134
MsG0580028670.01.T01 MTR_1g090737 28.141 398 248 11 83 464 180 555 5.28e-33 132
MsG0580028670.01.T01 MTR_1g026310 27.569 399 239 11 96 471 185 556 1.01e-32 131
MsG0580028670.01.T01 MTR_3g088880 28.723 376 240 10 111 475 198 556 1.34e-32 131
MsG0580028670.01.T01 MTR_3g088870 29.134 381 235 12 111 475 197 558 2.10e-32 130
MsG0580028670.01.T01 MTR_2g030240 26.562 448 290 12 59 469 2 447 9.85e-32 127
MsG0580028670.01.T01 MTR_2g030240 26.562 448 290 12 59 469 96 541 1.60e-31 127
MsG0580028670.01.T01 MTR_5g007640 29.600 375 231 14 110 469 221 577 1.84e-31 128
MsG0580028670.01.T01 MTR_1g063120 27.378 431 261 11 71 488 160 551 1.97e-31 127
MsG0580028670.01.T01 MTR_8g039720 28.686 373 225 11 115 471 208 555 2.24e-31 127
MsG0580028670.01.T01 MTR_4g057730 27.989 368 226 11 113 464 187 531 2.53e-30 124
MsG0580028670.01.T01 MTR_1g063110 27.132 387 256 10 91 464 164 537 4.29e-30 123
MsG0580028670.01.T01 MTR_1g073180 27.568 370 237 10 112 470 181 530 1.85e-28 119
MsG0580028670.01.T01 MTR_4g011790 28.148 405 239 17 100 470 208 594 5.48e-27 114
MsG0580028670.01.T01 MTR_4g013210 28.535 396 231 14 109 470 64 441 2.35e-26 111
MsG0580028670.01.T01 MTR_4g011790 28.109 402 237 17 100 467 208 591 3.09e-26 112
MsG0580028670.01.T01 MTR_1586s0010 26.524 328 216 7 5 324 111 421 1.20e-25 109
MsG0580028670.01.T01 MTR_4g011790 27.404 416 237 17 100 470 208 603 1.69e-25 110
MsG0580028670.01.T01 MTR_3g035130 29.206 315 200 11 111 416 160 460 6.06e-25 107
MsG0580028670.01.T01 MTR_2g095510 28.710 310 185 10 79 371 149 439 4.15e-24 105
MsG0580028670.01.T01 MTR_7g084850 27.937 383 238 13 113 471 352 720 2.82e-23 103
MsG0580028670.01.T01 MTR_4g057730 28.053 303 183 9 113 399 187 470 6.64e-23 101
MsG0580028670.01.T01 MTR_1054s0020 23.974 463 286 16 27 474 360 771 9.27e-23 102
MsG0580028670.01.T01 MTR_1g073180 25.714 350 230 9 112 451 203 532 1.21e-22 101
MsG0580028670.01.T01 MTR_4g013210 27.778 378 216 14 109 470 64 400 6.32e-22 98.2
MsG0580028670.01.T01 MTR_4g013210 27.968 379 214 16 109 470 216 552 1.58e-21 98.2
MsG0580028670.01.T01 MTR_4g013210 28.108 370 214 14 109 444 216 567 3.76e-19 90.9
MsG0580028670.01.T01 MTR_4g057730 27.636 275 164 9 113 371 187 442 1.02e-17 85.9
MsG0580028670.01.T01 MTR_7g109830 25.995 427 242 16 27 398 140 547 1.68e-14 76.6
MsG0580028670.01.T01 MTR_3g087980 49.398 83 36 3 318 394 500 582 2.15e-13 73.2
MsG0580028670.01.T01 MTR_1g030290 35.429 175 88 9 231 394 424 584 1.36e-12 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028670.01.T01 AT5G16370 66.180 479 153 4 1 478 78 548 0.0 673
MsG0580028670.01.T01 AT5G16340 66.176 476 152 5 1 475 78 545 0.0 665
MsG0580028670.01.T01 AT1G75960 63.025 476 165 5 1 474 78 544 0.0 626
MsG0580028670.01.T01 AT1G21540 61.134 476 177 4 1 474 80 549 0.0 615
MsG0580028670.01.T01 AT1G21530 61.088 478 173 7 1 474 80 548 0.0 607
MsG0580028670.01.T01 AT1G77240 61.555 476 171 5 1 474 79 544 0.0 605
MsG0580028670.01.T01 AT1G21530 61.088 478 171 8 1 474 80 546 0.0 602
MsG0580028670.01.T01 AT3G16910 50.000 488 229 7 1 479 85 566 2.01e-167 484
MsG0580028670.01.T01 AT1G20560 49.689 483 228 6 1 479 1 472 3.46e-167 481
MsG0580028670.01.T01 AT1G20560 49.689 483 228 6 1 479 79 550 1.97e-166 481
MsG0580028670.01.T01 AT2G17650 50.413 484 229 5 1 477 124 603 9.62e-163 474
MsG0580028670.01.T01 AT1G65890 48.911 505 227 10 1 488 77 567 4.91e-158 461
MsG0580028670.01.T01 AT1G66120 48.776 490 231 6 1 481 77 555 1.35e-157 459
MsG0580028670.01.T01 AT1G65880 47.755 490 230 6 1 474 77 556 1.87e-156 457
MsG0580028670.01.T01 AT1G76290 42.213 488 257 8 1 482 77 545 4.33e-126 378
MsG0580028670.01.T01 AT1G68270 42.474 485 232 9 1 474 77 525 5.84e-121 365
MsG0580028670.01.T01 AT3G21240 30.670 388 242 12 94 468 174 547 1.86e-40 153
MsG0580028670.01.T01 AT3G21230 30.831 373 223 11 112 468 208 561 4.25e-38 147
MsG0580028670.01.T01 AT1G20500 27.842 431 273 13 55 471 140 546 7.03e-37 143
MsG0580028670.01.T01 AT1G20510 28.974 390 240 12 98 471 172 540 1.07e-35 139
MsG0580028670.01.T01 AT4G19010 29.759 373 225 13 115 470 205 557 1.90e-34 136
MsG0580028670.01.T01 AT3G48990 29.919 371 227 13 111 469 159 508 6.22e-34 134
MsG0580028670.01.T01 AT5G63380 29.380 371 237 9 112 473 202 556 2.03e-32 130
MsG0580028670.01.T01 AT4G05160 28.506 435 258 15 59 464 123 533 3.66e-32 129
MsG0580028670.01.T01 AT1G65060 30.685 365 229 10 115 468 206 557 4.54e-32 129
MsG0580028670.01.T01 AT3G21230 29.942 344 206 11 112 439 208 532 1.01e-31 128
MsG0580028670.01.T01 AT1G51680 30.270 370 230 11 112 468 200 554 5.17e-31 126
MsG0580028670.01.T01 AT5G38120 29.231 390 230 15 100 470 188 550 8.67e-31 125
MsG0580028670.01.T01 AT1G20480 28.649 370 227 11 115 470 214 560 1.87e-30 125
MsG0580028670.01.T01 AT3G21240 29.688 320 202 10 94 400 174 483 1.21e-29 122
MsG0580028670.01.T01 AT3G21240 29.688 320 202 10 94 400 174 483 1.21e-29 122
MsG0580028670.01.T01 AT1G30520 26.667 390 236 10 115 469 173 547 3.63e-29 121
MsG0580028670.01.T01 AT1G30520 26.667 390 236 10 115 469 173 547 3.63e-29 121
MsG0580028670.01.T01 AT1G62940 30.102 392 239 15 94 468 160 533 2.72e-27 115
MsG0580028670.01.T01 AT1G51680 31.098 328 202 10 112 425 200 517 1.10e-26 113
MsG0580028670.01.T01 AT3G21230 29.836 305 183 10 112 400 208 497 6.68e-26 110
MsG0580028670.01.T01 AT1G20510 27.987 318 196 11 98 399 172 472 1.02e-25 110
MsG0580028670.01.T01 AT5G38120 28.531 354 212 14 100 439 188 514 6.00e-25 108
MsG0580028670.01.T01 AT3G16170 27.249 389 228 16 115 469 235 602 3.46e-24 106
MsG0580028670.01.T01 AT5G36880 26.179 424 261 13 87 471 255 665 4.01e-22 100
MsG0580028670.01.T01 AT5G36880 26.179 424 261 13 87 471 255 665 4.01e-22 100
MsG0580028670.01.T01 AT5G36880 26.179 424 261 13 87 471 255 665 4.01e-22 100
MsG0580028670.01.T01 AT5G36880 26.179 424 261 13 87 471 255 665 4.01e-22 100
MsG0580028670.01.T01 AT5G36880 26.179 424 261 13 87 471 305 715 5.65e-22 100
MsG0580028670.01.T01 AT1G51680 30.233 301 188 9 112 400 200 490 8.70e-22 98.6
MsG0580028670.01.T01 AT5G38120 28.981 314 186 12 100 399 188 478 1.92e-21 97.4
MsG0580028670.01.T01 AT5G38120 28.981 314 186 12 100 399 188 478 1.92e-21 97.4
MsG0580028670.01.T01 AT1G20510 26.688 311 190 11 98 386 172 466 4.96e-20 93.2
MsG0580028670.01.T01 AT1G30520 25.170 294 180 7 115 383 173 451 6.58e-16 80.5
MsG0580028670.01.T01 AT1G30520 25.170 294 180 7 115 383 173 451 6.58e-16 80.5
MsG0580028670.01.T01 AT1G77590 45.263 95 44 4 318 406 352 444 3.31e-12 69.3
MsG0580028670.01.T01 AT1G77590 45.263 95 44 4 318 406 498 590 3.77e-12 69.3
MsG0580028670.01.T01 AT2G04350 32.927 164 93 6 231 387 449 602 8.41e-11 65.1
MsG0580028670.01.T01 AT2G04350 32.927 164 93 6 231 387 449 602 8.41e-11 65.1

Find 127 sgRNAs with CRISPR-Local

Find 163 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGATAAACCCAGTTAAAATT+TGG 0.167962 5:+84569333 None:intergenic
TGGCAAGGGAGGATGAGTTT+TGG 0.268166 5:-84568444 MsG0580028670.01.T01:CDS
TTTGGTCATTGATGAGAATA+AGG 0.280571 5:+84569448 None:intergenic
CATAGATAAATAGGTTGTTT+TGG 0.298319 5:+84569183 None:intergenic
ATTGGGTCCCACTCTGAGTT+TGG 0.312073 5:+84569312 None:intergenic
GATATCTACGAAAACGAGTT+TGG 0.316504 5:+84569533 None:intergenic
GTGCTCCAGCGGTTAAAATA+TGG 0.320906 5:+84568953 None:intergenic
TCCACCGGACAGAAGCTTTA+GGG 0.321988 5:-84568912 MsG0580028670.01.T01:CDS
GAAGAATTTGCCGCATTATA+TGG 0.322752 5:-84568332 MsG0580028670.01.T01:CDS
CAAAACAACCTATTTATCTA+TGG 0.333896 5:-84569182 MsG0580028670.01.T01:CDS
GGTAGCGTCCATAGATAAAT+AGG 0.336419 5:+84569174 None:intergenic
TTCAACTTACGAAGATCTAA+TGG 0.345402 5:-84569367 MsG0580028670.01.T01:CDS
CTCCACCGGACAGAAGCTTT+AGG 0.361731 5:-84568913 MsG0580028670.01.T01:CDS
TTTCGTGTGTTTCAAATGTT+TGG 0.371383 5:+84569430 None:intergenic
GTTGTACATGGAAGAAGAAA+TGG 0.371428 5:-84568837 MsG0580028670.01.T01:CDS
GGTGAATGAGGCGGCGGTGG+TGG 0.380803 5:-84568464 MsG0580028670.01.T01:CDS
GAAGAAATGGAATTTGTTAC+CGG 0.393279 5:-84568824 MsG0580028670.01.T01:CDS
TACGAAGATCTAATGGCTTC+CGG 0.397456 5:-84569360 MsG0580028670.01.T01:CDS
AGAGGTGGTTGTGTCATGTT+AGG 0.398002 5:-84568673 MsG0580028670.01.T01:CDS
TGAGAATGAACTACACCTTT+TGG 0.414758 5:+84569255 None:intergenic
ATGTTACTCAACTACACTTC+CGG 0.423263 5:-84569291 MsG0580028670.01.T01:CDS
TGAGGCGGCGGTGGTGGCAA+GGG 0.439213 5:-84568458 MsG0580028670.01.T01:CDS
TGGAGGACCGCCGCAGGCGG+TGG 0.442952 5:+84568931 None:intergenic
GGCGGTGAATGAGGCGGCGG+TGG 0.443675 5:-84568467 MsG0580028670.01.T01:CDS
AAGAGATATTTGAGTACTGT+AGG 0.450823 5:-84568354 MsG0580028670.01.T01:CDS
CGGTGAAGGGGACGGCGAAA+TGG 0.461199 5:+84569628 None:intergenic
TGAAAGAAGGGTTGAAGGAA+AGG 0.463316 5:-84568393 MsG0580028670.01.T01:CDS
TCAAAAGATGTGATTATTAG+TGG 0.463586 5:-84568541 MsG0580028670.01.T01:CDS
ATGAGGCGGCGGTGGTGGCA+AGG 0.465014 5:-84568459 MsG0580028670.01.T01:CDS
TTTACAGTGAGTCATGGTTA+TGG 0.466198 5:-84568889 MsG0580028670.01.T01:CDS
CATTTCGCCGTCCCCTTCAC+CGG 0.466714 5:-84569627 MsG0580028670.01.T01:CDS
GACACACATGTGTGGTGCTC+CGG 0.467260 5:-84569031 MsG0580028670.01.T01:CDS
GATTGGTGGTTTGTTGTACA+TGG 0.470182 5:-84568849 MsG0580028670.01.T01:CDS
TACCTATGTTCCATGCTAAC+GGG 0.476941 5:-84569155 MsG0580028670.01.T01:CDS
CCGTTGATTCTTTAATCGAA+TGG 0.479034 5:-84569212 MsG0580028670.01.T01:CDS
GAGTTTGAAAGAAGGGTTGA+AGG 0.486977 5:-84568398 MsG0580028670.01.T01:CDS
GAGCTTCCAAAGACTTCTAC+CGG 0.490664 5:-84568283 MsG0580028670.01.T01:CDS
GTCCGGTGGAGGACCGCCGC+AGG 0.491037 5:+84568925 None:intergenic
CGCCTGCGGCGGTCCTCCAC+CGG 0.491571 5:-84568927 MsG0580028670.01.T01:CDS
TCAAATATCTCTTTCTCCGT+TGG 0.493592 5:+84568364 None:intergenic
CCAGTTAAAATTTGGATCAC+CGG 0.496945 5:+84569341 None:intergenic
CGGCAAGGAGTGAGAACCCT+AGG 0.499171 5:-84568775 MsG0580028670.01.T01:CDS
GGAACAACGTCGTCACCAAA+AGG 0.503990 5:-84569270 MsG0580028670.01.T01:CDS
CGCTGGAGCACCACCGCCTG+CGG 0.504287 5:-84568941 MsG0580028670.01.T01:CDS
GGTATTTAGAGATTAAAGAT+AGG 0.504970 5:-84568564 MsG0580028670.01.T01:CDS
CTACCTATGTTCCATGCTAA+CGG 0.506459 5:-84569156 MsG0580028670.01.T01:CDS
GTTTGGATTCGCAGTGGAGG+AGG 0.508080 5:+84569550 None:intergenic
GGTTATGGTCTAACGGAGAC+AGG 0.521411 5:-84568874 MsG0580028670.01.T01:CDS
GAGTAGTGTGGAGGTTGAGT+CGG 0.523111 5:-84568506 MsG0580028670.01.T01:CDS
GAAGTGTAGTTGAGTAACAT+TGG 0.523302 5:+84569294 None:intergenic
CATCAACCTTTGTCATCCCT+AGG 0.524830 5:+84568758 None:intergenic
AACCTTGCTCTCTCTGTCGC+CGG 0.525556 5:+84568805 None:intergenic
GGCGGCGGTGGTGGCAAGGG+AGG 0.530904 5:-84568455 MsG0580028670.01.T01:CDS
CTAACGGGTGGAGCTTCCCG+TGG 0.532728 5:-84569140 MsG0580028670.01.T01:CDS
TTGAGGATAGCGCCGGTGAA+GGG 0.533502 5:+84569615 None:intergenic
GGTGAAGTTGTTATGAGAGG+TGG 0.535576 5:-84568688 MsG0580028670.01.T01:CDS
CGCAGGCGGTGGTGCTCCAG+CGG 0.536221 5:+84568942 None:intergenic
AAGTGTAGTTGAGTAACATT+GGG 0.537573 5:+84569295 None:intergenic
AAACGAGATGGAGCAACGCT+TGG 0.538085 5:-84568709 MsG0580028670.01.T01:CDS
AACGGAGACAGGTGGATTGG+TGG 0.538928 5:-84568863 MsG0580028670.01.T01:CDS
TAACGGGTGGAGCTTCCCGT+GGG 0.539163 5:-84569139 MsG0580028670.01.T01:CDS
TGGACATCCGGCGGTGAATG+AGG 0.540160 5:-84568476 MsG0580028670.01.T01:CDS
GAAAGAAGGGTTGAAGGAAA+GGG 0.546935 5:-84568392 MsG0580028670.01.T01:CDS
TTCGCAGTGGAGGAGGATGT+TGG 0.547397 5:+84569557 None:intergenic
TGGAGCACCACCGCCTGCGG+CGG 0.553610 5:-84568938 MsG0580028670.01.T01:CDS
GGAAGCTCCACCCGTTAGCA+TGG 0.553881 5:+84569145 None:intergenic
TCCGGCGGTGAATGAGGCGG+CGG 0.555212 5:-84568470 MsG0580028670.01.T01:CDS
TCTAACGGAGACAGGTGGAT+TGG 0.555877 5:-84568866 MsG0580028670.01.T01:CDS
GTTGAGGATAGCGCCGGTGA+AGG 0.556327 5:+84569614 None:intergenic
CTAAAGCTTCTGTCCGGTGG+AGG 0.563322 5:+84568914 None:intergenic
AGAGAGCAAGGTTGAAGTCA+CGG 0.563709 5:-84568795 MsG0580028670.01.T01:CDS
GTAGGTGTAATGCATGAAGA+TGG 0.563846 5:-84568586 MsG0580028670.01.T01:CDS
GGCGAAATGGAGTTCATACA+TGG 0.565088 5:+84569641 None:intergenic
ACCCTAAAGCTTCTGTCCGG+TGG 0.565348 5:+84568911 None:intergenic
GATGACAAAGGTTGATGTAG+TGG 0.565684 5:-84568752 MsG0580028670.01.T01:CDS
ATCAACCTTTGTCATCCCTA+GGG 0.569958 5:+84568759 None:intergenic
CGAGTTTGGATTCGCAGTGG+AGG 0.571371 5:+84569547 None:intergenic
TTAGGGTTTACAGTGAGTCA+TGG 0.572267 5:-84568895 MsG0580028670.01.T01:CDS
CGGTGGAGGACCGCCGCAGG+CGG 0.578407 5:+84568928 None:intergenic
TAAACCCTAAAGCTTCTGTC+CGG 0.581049 5:+84568908 None:intergenic
ACGGGTGGAGCTTCCCGTGG+GGG 0.582132 5:-84569137 MsG0580028670.01.T01:CDS
ACTACTGCATCCTTCCTAAG+TGG 0.587459 5:+84568214 None:intergenic
GTTAACATGTTAAGAACCAC+CGG 0.587696 5:+84569012 None:intergenic
GAGGTGGTTGTGTCATGTTA+GGG 0.590854 5:-84568672 MsG0580028670.01.T01:CDS
CTAAGGATATGGGACCACTT+AGG 0.590978 5:-84568228 MsG0580028670.01.T01:CDS
TGGTGAGAATTTGAGTAGTG+TGG 0.591809 5:-84568518 MsG0580028670.01.T01:CDS
AGGATAAAGCTTGAAGAACA+AGG 0.592881 5:+84569499 None:intergenic
GGATATGGGACCACTTAGGA+AGG 0.592975 5:-84568224 MsG0580028670.01.T01:CDS
TGAGGATAGCGCCGGTGAAG+GGG 0.593670 5:+84569616 None:intergenic
GATAGCGCCGGTGAAGGGGA+CGG 0.593787 5:+84569620 None:intergenic
GAGTCATGGTTATGGTCTAA+CGG 0.595593 5:-84568881 MsG0580028670.01.T01:CDS
TAGGTGTAATGCATGAAGAT+GGG 0.598284 5:-84568585 MsG0580028670.01.T01:CDS
GGTGAAAGTGTAAAACGAGA+TGG 0.601159 5:-84568721 MsG0580028670.01.T01:CDS
GGCGCGTGTTGATGTTGTTG+AGG 0.607094 5:+84569598 None:intergenic
ATGACAAAGGTTGATGTAGT+GGG 0.607697 5:-84568751 MsG0580028670.01.T01:CDS
TACCGGCGACAGAGAGAGCA+AGG 0.608548 5:-84568807 MsG0580028670.01.T01:CDS
AACGGGTGGAGCTTCCCGTG+GGG 0.610896 5:-84569138 MsG0580028670.01.T01:CDS
GTAAGTTGAAATAAAATCAA+CGG 0.612045 5:+84569380 None:intergenic
TGGAGATGATACGCGCGTCA+AGG 0.612771 5:+84569577 None:intergenic
CCATTCGATTAAAGAATCAA+CGG 0.623822 5:+84569212 None:intergenic
GGTTTATCCAAACTCAGAGT+GGG 0.624443 5:-84569319 MsG0580028670.01.T01:CDS
ACCGCCGCCTCATTCACCGC+CGG 0.626771 5:+84568469 None:intergenic
CACCCGTTAGCATGGAACAT+AGG 0.633645 5:+84569153 None:intergenic
CTATGTTCCATGCTAACGGG+TGG 0.634027 5:-84569152 MsG0580028670.01.T01:CDS
GGGTATTTGAAAGATAGTGA+AGG 0.636873 5:-84568652 MsG0580028670.01.T01:CDS
GCAAGGTTGAAGTCACGGCA+AGG 0.639269 5:-84568790 MsG0580028670.01.T01:CDS
CGGTTATGATGAAAGTTCCA+CGG 0.640554 5:+84569232 None:intergenic
TTCAAACTCACAAAAGCACA+CGG 0.644342 5:+84568412 None:intergenic
ACACATGTGTGGTGCTCCGG+TGG 0.644428 5:-84569028 MsG0580028670.01.T01:CDS
GATGTTGTTGAGGATAGCGC+CGG 0.645734 5:+84569608 None:intergenic
ACATCCGGCGGTGAATGAGG+CGG 0.646521 5:-84568473 MsG0580028670.01.T01:CDS
AGCTTCCAAAGACTTCTACC+GGG 0.648071 5:-84568282 MsG0580028670.01.T01:CDS
AAACGAGTTTGGATTCGCAG+TGG 0.650226 5:+84569544 None:intergenic
CTTGGTGAAGTTGTTATGAG+AGG 0.659010 5:-84568691 MsG0580028670.01.T01:CDS
GGGTTTATCCAAACTCAGAG+TGG 0.661044 5:-84569320 MsG0580028670.01.T01:CDS
GGCAAGGAGTGAGAACCCTA+GGG 0.664706 5:-84568774 MsG0580028670.01.T01:CDS
GAAGGAAAGGGATATACCAA+CGG 0.665980 5:-84568380 MsG0580028670.01.T01:CDS
AAAGATGTGATTATTAGTGG+TGG 0.667039 5:-84568538 MsG0580028670.01.T01:CDS
TTGAAGAACAAGGTCACGTG+CGG 0.669921 5:+84569509 None:intergenic
AGTTGAAATAAAATCAACGG+TGG 0.674593 5:+84569383 None:intergenic
TATGGTCTAACGGAGACAGG+TGG 0.679930 5:-84568871 MsG0580028670.01.T01:CDS
TGAGAATTTGAGTAGTGTGG+AGG 0.682689 5:-84568515 MsG0580028670.01.T01:CDS
TCATTGATGAGAATAAGGAG+AGG 0.705333 5:+84569453 None:intergenic
GAGAACCCTAGGGATGACAA+AGG 0.708804 5:-84568764 MsG0580028670.01.T01:CDS
CATCACGTGACACACATGTG+TGG 0.722078 5:-84569039 MsG0580028670.01.T01:CDS
GTTGATGTAGTGGGTCCCAG+TGG 0.749534 5:-84568742 MsG0580028670.01.T01:CDS
GGTGTAGTTCATTCTCACCG+TGG 0.756588 5:-84569249 MsG0580028670.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AACAAAGAATTGTTTTAAGA+AGG - Chr5:84569205-84569224 MsG0580028670.01.T01:CDS 20.0%
!!! ACAAAGAATTGTTTTAAGAA+GGG - Chr5:84569206-84569225 MsG0580028670.01.T01:CDS 20.0%
!!! GTAAGTTGAAATAAAATCAA+CGG + Chr5:84568457-84568476 None:intergenic 20.0%
! AGAAAAATTGCTAAGGATAT+GGG - Chr5:84569596-84569615 MsG0580028670.01.T01:CDS 25.0%
! CAAAACAACCTATTTATCTA+TGG - Chr5:84568652-84568671 MsG0580028670.01.T01:CDS 25.0%
! GGTATTTAGAGATTAAAGAT+AGG - Chr5:84569270-84569289 MsG0580028670.01.T01:CDS 25.0%
! TAGAAAAATTGCTAAGGATA+TGG - Chr5:84569595-84569614 MsG0580028670.01.T01:CDS 25.0%
! TCAAAAGATGTGATTATTAG+TGG - Chr5:84569293-84569312 MsG0580028670.01.T01:CDS 25.0%
! TGTACTTAGAAAAATTGCTA+AGG - Chr5:84569589-84569608 MsG0580028670.01.T01:CDS 25.0%
!! CATAGATAAATAGGTTGTTT+TGG + Chr5:84568654-84568673 None:intergenic 25.0%
!!! ATGTTGTTTTGAAGGAAATA+AGG + Chr5:84568358-84568377 None:intergenic 25.0%
AAAGATGTGATTATTAGTGG+TGG - Chr5:84569296-84569315 MsG0580028670.01.T01:CDS 30.0%
AAGTGTAGTTGAGTAACATT+GGG + Chr5:84568542-84568561 None:intergenic 30.0%
AGTTGAAATAAAATCAACGG+TGG + Chr5:84568454-84568473 None:intergenic 30.0%
CCATTCGATTAAAGAATCAA+CGG + Chr5:84568625-84568644 None:intergenic 30.0%
GCATTATATGGTTCCAAAAA+CGG - Chr5:84569514-84569533 MsG0580028670.01.T01:CDS 30.0%
GGATAAACCCAGTTAAAATT+TGG + Chr5:84568504-84568523 None:intergenic 30.0%
TTCAACTTACGAAGATCTAA+TGG - Chr5:84568467-84568486 MsG0580028670.01.T01:CDS 30.0%
TTTCGTGTGTTTCAAATGTT+TGG + Chr5:84568407-84568426 None:intergenic 30.0%
TTTGGTCATTGATGAGAATA+AGG + Chr5:84568389-84568408 None:intergenic 30.0%
! AAGAGATATTTGAGTACTGT+AGG - Chr5:84569480-84569499 MsG0580028670.01.T01:CDS 30.0%
! CTTTTGTGAGTTTGAAAGAA+GGG - Chr5:84569429-84569448 MsG0580028670.01.T01:CDS 30.0%
! TACAAACTTCTGAATTTTCC+CGG + Chr5:84569573-84569592 None:intergenic 30.0%
! TTTTGCAACGGTTTATTATC+AGG + Chr5:84568855-84568874 None:intergenic 30.0%
!! GAAGAAATGGAATTTGTTAC+CGG - Chr5:84569010-84569029 MsG0580028670.01.T01:CDS 30.0%
!!! AGAATTGTTTTAAGAAGGGT+TGG - Chr5:84569210-84569229 MsG0580028670.01.T01:CDS 30.0%
!!! AGAGGTTTATGTTGTTTTGA+AGG + Chr5:84568366-84568385 None:intergenic 30.0%
!!! ATATGGACAGTTTTTTGCAA+CGG + Chr5:84568867-84568886 None:intergenic 30.0%
!!! GTTTTTGGAACCATATAATG+CGG + Chr5:84569515-84569534 None:intergenic 30.0%
AGGATAAAGCTTGAAGAACA+AGG + Chr5:84568338-84568357 None:intergenic 35.0%
ATGTTACTCAACTACACTTC+CGG - Chr5:84568543-84568562 MsG0580028670.01.T01:CDS 35.0%
CCAGTTAAAATTTGGATCAC+CGG + Chr5:84568496-84568515 None:intergenic 35.0%
GAAGAATTTGCCGCATTATA+TGG - Chr5:84569502-84569521 MsG0580028670.01.T01:CDS 35.0%
GAAGTGTAGTTGAGTAACAT+TGG + Chr5:84568543-84568562 None:intergenic 35.0%
GATATCTACGAAAACGAGTT+TGG + Chr5:84568304-84568323 None:intergenic 35.0%
GGGTATTTGAAAGATAGTGA+AGG - Chr5:84569182-84569201 MsG0580028670.01.T01:CDS 35.0%
GTTAACATGTTAAGAACCAC+CGG + Chr5:84568825-84568844 None:intergenic 35.0%
GTTGTACATGGAAGAAGAAA+TGG - Chr5:84568997-84569016 MsG0580028670.01.T01:CDS 35.0%
TAGGTGTAATGCATGAAGAT+GGG - Chr5:84569249-84569268 MsG0580028670.01.T01:CDS 35.0%
TCAAATATCTCTTTCTCCGT+TGG + Chr5:84569473-84569492 None:intergenic 35.0%
TCATTGATGAGAATAAGGAG+AGG + Chr5:84568384-84568403 None:intergenic 35.0%
TTATATGGTTCCAAAAACGG+TGG - Chr5:84569517-84569536 MsG0580028670.01.T01:CDS 35.0%
TTTACAGTGAGTCATGGTTA+TGG - Chr5:84568945-84568964 MsG0580028670.01.T01:CDS 35.0%
! GCTTTTGTGAGTTTGAAAGA+AGG - Chr5:84569428-84569447 MsG0580028670.01.T01:CDS 35.0%
! TCTTTAAACACCACCGTTTT+TGG + Chr5:84569530-84569549 None:intergenic 35.0%
! TGAGAATGAACTACACCTTT+TGG + Chr5:84568582-84568601 None:intergenic 35.0%
! TTCAAACTCACAAAAGCACA+CGG + Chr5:84569425-84569444 None:intergenic 35.0%
!! ATGACAAAGGTTGATGTAGT+GGG - Chr5:84569083-84569102 MsG0580028670.01.T01:CDS 35.0%
!! CCGTTGATTCTTTAATCGAA+TGG - Chr5:84568622-84568641 MsG0580028670.01.T01:CDS 35.0%
!!! CGGTGATCCAAATTTTAACT+GGG - Chr5:84568494-84568513 MsG0580028670.01.T01:CDS 35.0%
ATCAACCTTTGTCATCCCTA+GGG + Chr5:84569078-84569097 None:intergenic 40.0%
CGGTTATGATGAAAGTTCCA+CGG + Chr5:84568605-84568624 None:intergenic 40.0%
CTACCTATGTTCCATGCTAA+CGG - Chr5:84568678-84568697 MsG0580028670.01.T01:CDS 40.0%
CTTGGTGAAGTTGTTATGAG+AGG - Chr5:84569143-84569162 MsG0580028670.01.T01:CDS 40.0%
GAAAGAAGGGTTGAAGGAAA+GGG - Chr5:84569442-84569461 MsG0580028670.01.T01:CDS 40.0%
GAAGGAAAGGGATATACCAA+CGG - Chr5:84569454-84569473 MsG0580028670.01.T01:CDS 40.0%
GAGTCATGGTTATGGTCTAA+CGG - Chr5:84568953-84568972 MsG0580028670.01.T01:CDS 40.0%
GAGTTTGAAAGAAGGGTTGA+AGG - Chr5:84569436-84569455 MsG0580028670.01.T01:CDS 40.0%
GGTAGCGTCCATAGATAAAT+AGG + Chr5:84568663-84568682 None:intergenic 40.0%
GGTTTATCCAAACTCAGAGT+GGG - Chr5:84568515-84568534 MsG0580028670.01.T01:CDS 40.0%
GTAGGTGTAATGCATGAAGA+TGG - Chr5:84569248-84569267 MsG0580028670.01.T01:CDS 40.0%
TAAACCCTAAAGCTTCTGTC+CGG + Chr5:84568929-84568948 None:intergenic 40.0%
TACCTATGTTCCATGCTAAC+GGG - Chr5:84568679-84568698 MsG0580028670.01.T01:CDS 40.0%
TACGAAGATCTAATGGCTTC+CGG - Chr5:84568474-84568493 MsG0580028670.01.T01:CDS 40.0%
TGAAAGAAGGGTTGAAGGAA+AGG - Chr5:84569441-84569460 MsG0580028670.01.T01:CDS 40.0%
TGAGAATTTGAGTAGTGTGG+AGG - Chr5:84569319-84569338 MsG0580028670.01.T01:CDS 40.0%
TGGTGAGAATTTGAGTAGTG+TGG - Chr5:84569316-84569335 MsG0580028670.01.T01:CDS 40.0%
TTAGGGTTTACAGTGAGTCA+TGG - Chr5:84568939-84568958 MsG0580028670.01.T01:CDS 40.0%
! ATTTTCCCGGTAGAAGTCTT+TGG + Chr5:84569560-84569579 None:intergenic 40.0%
! CGTTTTACACTTTCACCACT+GGG + Chr5:84569110-84569129 None:intergenic 40.0%
! GGTGAAAGTGTAAAACGAGA+TGG - Chr5:84569113-84569132 MsG0580028670.01.T01:CDS 40.0%
! TCGTTTTACACTTTCACCAC+TGG + Chr5:84569111-84569130 None:intergenic 40.0%
!! CCGGTGATCCAAATTTTAAC+TGG - Chr5:84568493-84568512 MsG0580028670.01.T01:CDS 40.0%
!! GATGACAAAGGTTGATGTAG+TGG - Chr5:84569082-84569101 MsG0580028670.01.T01:CDS 40.0%
!! GATTGGTGGTTTGTTGTACA+TGG - Chr5:84568985-84569004 MsG0580028670.01.T01:CDS 40.0%
!! TGGTTTTACACTGGTGATGT+AGG - Chr5:84569230-84569249 MsG0580028670.01.T01:CDS 40.0%
!!! AAGAAGGGTTGGTTTTACAC+TGG - Chr5:84569221-84569240 MsG0580028670.01.T01:CDS 40.0%
!!! ACTGTCCATATTTTAACCGC+TGG - Chr5:84568876-84568895 MsG0580028670.01.T01:CDS 40.0%
AAACGAGTTTGGATTCGCAG+TGG + Chr5:84568293-84568312 None:intergenic 45.0%
ACTACTGCATCCTTCCTAAG+TGG + Chr5:84569623-84569642 None:intergenic 45.0%
AGAGAGCAAGGTTGAAGTCA+CGG - Chr5:84569039-84569058 MsG0580028670.01.T01:CDS 45.0%
AGAGGTGGTTGTGTCATGTT+AGG - Chr5:84569161-84569180 MsG0580028670.01.T01:CDS 45.0%
AGCTTCCAAAGACTTCTACC+GGG - Chr5:84569552-84569571 MsG0580028670.01.T01:CDS 45.0%
CATCAACCTTTGTCATCCCT+AGG + Chr5:84569079-84569098 None:intergenic 45.0%
CTAAGGATATGGGACCACTT+AGG - Chr5:84569606-84569625 MsG0580028670.01.T01:CDS 45.0%
GAGCTTCCAAAGACTTCTAC+CGG - Chr5:84569551-84569570 MsG0580028670.01.T01:CDS 45.0%
GAGGTGGTTGTGTCATGTTA+GGG - Chr5:84569162-84569181 MsG0580028670.01.T01:CDS 45.0%
GGGTTTATCCAAACTCAGAG+TGG - Chr5:84568514-84568533 MsG0580028670.01.T01:CDS 45.0%
GGTGAAGTTGTTATGAGAGG+TGG - Chr5:84569146-84569165 MsG0580028670.01.T01:CDS 45.0%
GTGCTCCAGCGGTTAAAATA+TGG + Chr5:84568884-84568903 None:intergenic 45.0%
TTGAAGAACAAGGTCACGTG+CGG + Chr5:84568328-84568347 None:intergenic 45.0%
!! GAGGTTGAGTCGGTTTTGTA+TGG - Chr5:84569338-84569357 MsG0580028670.01.T01:CDS 45.0%
!! GTCGGTTTTGTATGGACATC+CGG - Chr5:84569346-84569365 MsG0580028670.01.T01:CDS 45.0%
!!! TTTTGGTGACGACGTTGTTC+CGG + Chr5:84568565-84568584 None:intergenic 45.0%
AAACGAGATGGAGCAACGCT+TGG - Chr5:84569125-84569144 MsG0580028670.01.T01:CDS 50.0%
ATTGGGTCCCACTCTGAGTT+TGG + Chr5:84568525-84568544 None:intergenic 50.0%
CACCCGTTAGCATGGAACAT+AGG + Chr5:84568684-84568703 None:intergenic 50.0%
CATCACGTGACACACATGTG+TGG - Chr5:84568795-84568814 MsG0580028670.01.T01:CDS 50.0%
CTATGTTCCATGCTAACGGG+TGG - Chr5:84568682-84568701 MsG0580028670.01.T01:CDS 50.0%
GAGAACCCTAGGGATGACAA+AGG - Chr5:84569070-84569089 MsG0580028670.01.T01:CDS 50.0%
GAGTAGTGTGGAGGTTGAGT+CGG - Chr5:84569328-84569347 MsG0580028670.01.T01:CDS 50.0%
GATGTTGTTGAGGATAGCGC+CGG + Chr5:84568229-84568248 None:intergenic 50.0%
GGAACAACGTCGTCACCAAA+AGG - Chr5:84568564-84568583 MsG0580028670.01.T01:CDS 50.0%
GGATATGGGACCACTTAGGA+AGG - Chr5:84569610-84569629 MsG0580028670.01.T01:CDS 50.0%
GGTGTAGTTCATTCTCACCG+TGG - Chr5:84568585-84568604 MsG0580028670.01.T01:CDS 50.0%
GGTTATGGTCTAACGGAGAC+AGG - Chr5:84568960-84568979 MsG0580028670.01.T01:CDS 50.0%
TATGGTCTAACGGAGACAGG+TGG - Chr5:84568963-84568982 MsG0580028670.01.T01:CDS 50.0%
TCCACCGGACAGAAGCTTTA+GGG - Chr5:84568922-84568941 MsG0580028670.01.T01:CDS 50.0%
TCTAACGGAGACAGGTGGAT+TGG - Chr5:84568968-84568987 MsG0580028670.01.T01:CDS 50.0%
! GCAAGGGAGGATGAGTTTTG+GGG - Chr5:84569392-84569411 MsG0580028670.01.T01:CDS 50.0%
! GGCAAGGGAGGATGAGTTTT+GGG - Chr5:84569391-84569410 MsG0580028670.01.T01:CDS 50.0%
! TGGCAAGGGAGGATGAGTTT+TGG - Chr5:84569390-84569409 MsG0580028670.01.T01:CDS 50.0%
!! CAAGGGAGGATGAGTTTTGG+GGG - Chr5:84569393-84569412 MsG0580028670.01.T01:CDS 50.0%
!! GGTTTTGTATGGACATCCGG+CGG - Chr5:84569349-84569368 MsG0580028670.01.T01:CDS 50.0%
!!! AAGGGAGGATGAGTTTTGGG+GGG - Chr5:84569394-84569413 MsG0580028670.01.T01:CDS 50.0%
AACCTTGCTCTCTCTGTCGC+CGG + Chr5:84569032-84569051 None:intergenic 55.0%
ACCCTAAAGCTTCTGTCCGG+TGG + Chr5:84568926-84568945 None:intergenic 55.0%
CGAGTTTGGATTCGCAGTGG+AGG + Chr5:84568290-84568309 None:intergenic 55.0%
CTAAAGCTTCTGTCCGGTGG+AGG + Chr5:84568923-84568942 None:intergenic 55.0%
CTCCACCGGACAGAAGCTTT+AGG - Chr5:84568921-84568940 MsG0580028670.01.T01:CDS 55.0%
GACACACATGTGTGGTGCTC+CGG - Chr5:84568803-84568822 MsG0580028670.01.T01:CDS 55.0%
GCAAGGTTGAAGTCACGGCA+AGG - Chr5:84569044-84569063 MsG0580028670.01.T01:CDS 55.0%
GGCAAGGAGTGAGAACCCTA+GGG - Chr5:84569060-84569079 MsG0580028670.01.T01:CDS 55.0%
GTTTGGATTCGCAGTGGAGG+AGG + Chr5:84568287-84568306 None:intergenic 55.0%
TGGAGATGATACGCGCGTCA+AGG + Chr5:84568260-84568279 None:intergenic 55.0%
TTCGCAGTGGAGGAGGATGT+TGG + Chr5:84568280-84568299 None:intergenic 55.0%
! GGCGCGTGTTGATGTTGTTG+AGG + Chr5:84568239-84568258 None:intergenic 55.0%
!! AACGGAGACAGGTGGATTGG+TGG - Chr5:84568971-84568990 MsG0580028670.01.T01:CDS 55.0%
!! GTTGATGTAGTGGGTCCCAG+TGG - Chr5:84569092-84569111 MsG0580028670.01.T01:CDS 55.0%
!! TTGAGGATAGCGCCGGTGAA+GGG + Chr5:84568222-84568241 None:intergenic 55.0%
ACACATGTGTGGTGCTCCGG+TGG - Chr5:84568806-84568825 MsG0580028670.01.T01:CDS 60.0%
ACATCCGGCGGTGAATGAGG+CGG - Chr5:84569361-84569380 MsG0580028670.01.T01:CDS 60.0%
CAACAGCTGCAATCCCCCAC+GGG + Chr5:84568713-84568732 None:intergenic 60.0%
CATTTCGCCGTCCCCTTCAC+CGG - Chr5:84568207-84568226 MsG0580028670.01.T01:CDS 60.0%
CCAACAGCTGCAATCCCCCA+CGG + Chr5:84568714-84568733 None:intergenic 60.0%
CGGCAAGGAGTGAGAACCCT+AGG - Chr5:84569059-84569078 MsG0580028670.01.T01:CDS 60.0%
GGAAGCTCCACCCGTTAGCA+TGG + Chr5:84568692-84568711 None:intergenic 60.0%
TACCGGCGACAGAGAGAGCA+AGG - Chr5:84569027-84569046 MsG0580028670.01.T01:CDS 60.0%
TGGACATCCGGCGGTGAATG+AGG - Chr5:84569358-84569377 MsG0580028670.01.T01:CDS 60.0%
TGGGGGATTGCAGCTGTTGG+TGG - Chr5:84568714-84568733 MsG0580028670.01.T01:CDS 60.0%
! TAACGGGTGGAGCTTCCCGT+GGG - Chr5:84568695-84568714 MsG0580028670.01.T01:CDS 60.0%
!! GTTGAGGATAGCGCCGGTGA+AGG + Chr5:84568223-84568242 None:intergenic 60.0%
!! TGAGGATAGCGCCGGTGAAG+GGG + Chr5:84568221-84568240 None:intergenic 60.0%
AACGGGTGGAGCTTCCCGTG+GGG - Chr5:84568696-84568715 MsG0580028670.01.T01:CDS 65.0%
CCGTGGGGGATTGCAGCTGT+TGG - Chr5:84568711-84568730 MsG0580028670.01.T01:CDS 65.0%
CGGTGAAGGGGACGGCGAAA+TGG + Chr5:84568209-84568228 None:intergenic 65.0%
! CTAACGGGTGGAGCTTCCCG+TGG - Chr5:84568694-84568713 MsG0580028670.01.T01:CDS 65.0%
!! GATAGCGCCGGTGAAGGGGA+CGG + Chr5:84568217-84568236 None:intergenic 65.0%
ACCGCCGCCTCATTCACCGC+CGG + Chr5:84569368-84569387 None:intergenic 70.0%
ACGGGTGGAGCTTCCCGTGG+GGG - Chr5:84568697-84568716 MsG0580028670.01.T01:CDS 70.0%
GGTGAATGAGGCGGCGGTGG+TGG - Chr5:84569370-84569389 MsG0580028670.01.T01:CDS 70.0%
TCCGGCGGTGAATGAGGCGG+CGG - Chr5:84569364-84569383 MsG0580028670.01.T01:CDS 70.0%
! ATGAGGCGGCGGTGGTGGCA+AGG - Chr5:84569375-84569394 MsG0580028670.01.T01:CDS 70.0%
! TGAGGCGGCGGTGGTGGCAA+GGG - Chr5:84569376-84569395 MsG0580028670.01.T01:CDS 70.0%
CGCAGGCGGTGGTGCTCCAG+CGG + Chr5:84568895-84568914 None:intergenic 75.0%
GGCGGTGAATGAGGCGGCGG+TGG - Chr5:84569367-84569386 MsG0580028670.01.T01:CDS 75.0%
! CGCTGGAGCACCACCGCCTG+CGG - Chr5:84568893-84568912 MsG0580028670.01.T01:CDS 75.0%
! TGGAGCACCACCGCCTGCGG+CGG - Chr5:84568896-84568915 MsG0580028670.01.T01:CDS 75.0%
! CGCCTGCGGCGGTCCTCCAC+CGG - Chr5:84568907-84568926 MsG0580028670.01.T01:CDS 80.0%
! CGGTGGAGGACCGCCGCAGG+CGG + Chr5:84568909-84568928 None:intergenic 80.0%
! GTCCGGTGGAGGACCGCCGC+AGG + Chr5:84568912-84568931 None:intergenic 80.0%
! TGGAGGACCGCCGCAGGCGG+TGG + Chr5:84568906-84568925 None:intergenic 80.0%
!! GGCGGCGGTGGTGGCAAGGG+AGG - Chr5:84569379-84569398 MsG0580028670.01.T01:CDS 80.0%
Chromosome Type Strat End Strand Name
Chr5 gene 84568195 84569661 84568195 ID=MsG0580028670.01;Name=MsG0580028670.01
Chr5 mRNA 84568195 84569661 84568195 ID=MsG0580028670.01.T01;Parent=MsG0580028670.01;Name=MsG0580028670.01.T01;_AED=0.24;_eAED=0.24;_QI=0|-1|0|1|-1|1|1|0|488
Chr5 exon 84568195 84569661 84568195 ID=MsG0580028670.01.T01:exon:5183;Parent=MsG0580028670.01.T01
Chr5 CDS 84568195 84569661 84568195 ID=MsG0580028670.01.T01:cds;Parent=MsG0580028670.01.T01
Gene Sequence

>MsG0580028670.01.T01

ATGTATGAACTCCATTTCGCCGTCCCCTTCACCGGCGCTATCCTCAACAACATCAACACGCGCCTTGACGCGCGTATCATCTCCAACATCCTCCTCCACTGCGAATCCAAACTCGTTTTCGTAGATATCGCCGCACGTGACCTTGTTCTTCAAGCTTTATCCTTATTTCCTTCAAAACAACATAAACCTCTCCTTATTCTCATCAATGACCAAACATTTGAAACACACGAAACATACGAAAATGTTTCTTCATCTTCCACCGTTGATTTTATTTCAACTTACGAAGATCTAATGGCTTCCGGTGATCCAAATTTTAACTGGGTTTATCCAAACTCAGAGTGGGACCCAATGTTACTCAACTACACTTCCGGAACAACGTCGTCACCAAAAGGTGTAGTTCATTCTCACCGTGGAACTTTCATCATAACCGTTGATTCTTTAATCGAATGGACAGTTCCAAAACAACCTATTTATCTATGGACGCTACCTATGTTCCATGCTAACGGGTGGAGCTTCCCGTGGGGGATTGCAGCTGTTGGTGGAACAAACATCTGCGTAAGAAAATTCGACGCTGAAATTGTTTTTTCTCTCATCAGAAAACATCACGTGACACACATGTGTGGTGCTCCGGTGGTTCTTAACATGTTAACTAACTCACCTGATAATAAACCGTTGCAAAAAACTGTCCATATTTTAACCGCTGGAGCACCACCGCCTGCGGCGGTCCTCCACCGGACAGAAGCTTTAGGGTTTACAGTGAGTCATGGTTATGGTCTAACGGAGACAGGTGGATTGGTGGTTTGTTGTACATGGAAGAAGAAATGGAATTTGTTACCGGCGACAGAGAGAGCAAGGTTGAAGTCACGGCAAGGAGTGAGAACCCTAGGGATGACAAAGGTTGATGTAGTGGGTCCCAGTGGTGAAAGTGTAAAACGAGATGGAGCAACGCTTGGTGAAGTTGTTATGAGAGGTGGTTGTGTCATGTTAGGGTATTTGAAAGATAGTGAAGGAACAAAGAATTGTTTTAAGAAGGGTTGGTTTTACACTGGTGATGTAGGTGTAATGCATGAAGATGGGTATTTAGAGATTAAAGATAGGTCAAAAGATGTGATTATTAGTGGTGGTGAGAATTTGAGTAGTGTGGAGGTTGAGTCGGTTTTGTATGGACATCCGGCGGTGAATGAGGCGGCGGTGGTGGCAAGGGAGGATGAGTTTTGGGGGGAGACACCGTGTGCTTTTGTGAGTTTGAAAGAAGGGTTGAAGGAAAGGGATATACCAACGGAGAAAGAGATATTTGAGTACTGTAGGAAGAATTTGCCGCATTATATGGTTCCAAAAACGGTGGTGTTTAAAGATGAGCTTCCAAAGACTTCTACCGGGAAAATTCAGAAGTTTGTACTTAGAAAAATTGCTAAGGATATGGGACCACTTAGGAAGGATGCAGTAGTCACAAAAAGTCGTATGTGA
Protein sequence

>MsG0580028670.01.T01

MYELHFAVPFTGAILNNINTRLDARIISNILLHCESKLVFVDIAARDLVLQALSLFPSKQHKPLLILINDQTFETHETYENVSSSSTVDFISTYEDLMASGDPNFNWVYPNSEWDPMLLNYTSGTTSSPKGVVHSHRGTFIITVDSLIEWTVPKQPIYLWTLPMFHANGWSFPWGIAAVGGTNICVRKFDAEIVFSLIRKHHVTHMCGAPVVLNMLTNSPDNKPLQKTVHILTAGAPPPAAVLHRTEALGFTVSHGYGLTETGGLVVCCTWKKKWNLLPATERARLKSRQGVRTLGMTKVDVVGPSGESVKRDGATLGEVVMRGGCVMLGYLKDSEGTKNCFKKGWFYTGDVGVMHEDGYLEIKDRSKDVIISGGENLSSVEVESVLYGHPAVNEAAVVAREDEFWGETPCAFVSLKEGLKERDIPTEKEIFEYCRKNLPHYMVPKTVVFKDELPKTSTGKIQKFVLRKIAKDMGPLRKDAVVTKSRM*