Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380015178.01.T01 | XP_003600627.1 | 97.938 | 582 | 11 | 1 | 1 | 581 | 1 | 582 | 0 | 1186 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380015178.01.T01 | I3PB36 | 66.254 | 566 | 179 | 4 | 1 | 561 | 1 | 559 | 0 | 791 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380015178.01.T01 | G7J7Y4 | 97.938 | 582 | 11 | 1 | 1 | 581 | 1 | 582 | 0.0 | 1186 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180000292.01 | MsG0380015178.01 | 0.805174 | 1.516273e-49 | 7.967779e-47 |
MsG0180001371.01 | MsG0380015178.01 | 0.810213 | 1.289160e-50 | 7.724551e-48 |
MsG0180003730.01 | MsG0380015178.01 | 0.815437 | 9.248657e-52 | 6.376443e-49 |
MsG0180003906.01 | MsG0380015178.01 | 0.804325 | 2.280813e-49 | 1.172572e-46 |
MsG0180005039.01 | MsG0380015178.01 | 0.816835 | 4.506646e-52 | 3.228189e-49 |
MsG0280010611.01 | MsG0380015178.01 | 0.802927 | 4.447020e-49 | 2.205667e-46 |
MsG0380015178.01 | MsG0380017423.01 | 0.846508 | 2.078887e-59 | 3.586571e-56 |
MsG0380015178.01 | MsG0480020888.01 | 0.823568 | 1.291426e-53 | 1.116035e-50 |
MsG0380015178.01 | MsG0480023590.01 | 0.800748 | 1.246035e-48 | 5.847572e-46 |
MsG0380015178.01 | MsG0480023656.01 | 0.855149 | 7.658818e-62 | 1.751083e-58 |
MsG0380015178.01 | MsG0580025859.01 | 0.809766 | 1.609105e-50 | 9.530641e-48 |
MsG0380015178.01 | MsG0580027394.01 | 0.801477 | 8.838356e-49 | 4.225121e-46 |
MsG0380015178.01 | MsG0580027410.01 | 0.813837 | 2.091358e-51 | 1.380557e-48 |
MsG0380015178.01 | MsG0580029353.01 | 0.853570 | 2.190005e-61 | 4.752971e-58 |
MsG0380015178.01 | MsG0580029394.01 | 0.803094 | 4.108165e-49 | 2.046141e-46 |
MsG0380015178.01 | MsG0580029529.01 | 0.803739 | 3.019132e-49 | 1.528994e-46 |
MsG0380015178.01 | MsG0780038334.01 | 0.821865 | 3.216114e-53 | 2.648358e-50 |
MsG0380015178.01 | MsG0780038341.01 | 0.820326 | 7.277142e-53 | 5.739872e-50 |
MsG0380015178.01 | MsG0780039186.01 | 0.848335 | 6.542674e-60 | 1.196679e-56 |
MsG0380015178.01 | MsG0780040700.01 | 0.809771 | 1.604942e-50 | 9.507234e-48 |
MsG0380015178.01 | MsG0880042475.01 | 0.842342 | 2.742364e-58 | 4.145739e-55 |
MsG0380015178.01 | MsG0880043249.01 | 0.814668 | 1.370221e-51 | 9.251068e-49 |
MsG0380015178.01 | MsG0880046866.01 | 0.801349 | 9.388108e-49 | 4.473438e-46 |
MsG0380015178.01 | MsG0880047160.01 | 0.810030 | 1.411337e-50 | 8.417369e-48 |
MsG0380015178.01 | MsG0880047161.01 | 0.800400 | 1.467207e-48 | 6.825124e-46 |
MsG0280006587.01 | MsG0380015178.01 | 0.802070 | 6.678877e-49 | 3.241161e-46 |
MsG0280006989.01 | MsG0380015178.01 | 0.807439 | 5.050949e-50 | 2.813395e-47 |
MsG0280006991.01 | MsG0380015178.01 | 0.820222 | 7.689158e-53 | 6.047611e-50 |
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380015178.01.T01 | MTR_3g064420 | 97.938 | 582 | 11 | 1 | 1 | 581 | 1 | 582 | 0.0 | 1186 |
MsG0380015178.01.T01 | MTR_8g074040 | 50.450 | 555 | 259 | 4 | 1 | 553 | 43 | 583 | 0.0 | 599 |
MsG0380015178.01.T01 | MTR_5g076240 | 53.286 | 563 | 233 | 8 | 1 | 551 | 1 | 545 | 0.0 | 588 |
MsG0380015178.01.T01 | MTR_5g008800 | 50.271 | 553 | 261 | 3 | 1 | 553 | 1 | 539 | 0.0 | 588 |
MsG0380015178.01.T01 | MTR_4g121600 | 51.792 | 558 | 254 | 8 | 1 | 551 | 7 | 556 | 0.0 | 577 |
MsG0380015178.01.T01 | MTR_2g044180 | 51.075 | 558 | 258 | 7 | 1 | 551 | 7 | 556 | 0.0 | 572 |
MsG0380015178.01.T01 | MTR_5g076220 | 52.151 | 558 | 248 | 8 | 1 | 551 | 1 | 546 | 0.0 | 555 |
MsG0380015178.01.T01 | MTR_5g008820 | 47.473 | 554 | 269 | 5 | 1 | 551 | 1 | 535 | 0.0 | 550 |
MsG0380015178.01.T01 | MTR_5g076200 | 50.538 | 558 | 257 | 7 | 1 | 551 | 1 | 546 | 0.0 | 542 |
MsG0380015178.01.T01 | MTR_0161s0050 | 49.113 | 564 | 258 | 6 | 1 | 551 | 1 | 548 | 0.0 | 530 |
MsG0380015178.01.T01 | MTR_8g074040 | 51.148 | 479 | 218 | 4 | 77 | 553 | 1 | 465 | 0.0 | 525 |
MsG0380015178.01.T01 | MTR_8g074120 | 49.693 | 489 | 230 | 4 | 67 | 553 | 20 | 494 | 4.94e-177 | 511 |
MsG0380015178.01.T01 | MTR_2g044180 | 50.529 | 473 | 219 | 7 | 86 | 551 | 1 | 465 | 5.51e-164 | 476 |
MsG0380015178.01.T01 | MTR_5g023730 | 41.547 | 556 | 300 | 11 | 3 | 551 | 4 | 541 | 4.71e-141 | 420 |
MsG0380015178.01.T01 | MTR_0803s0020 | 31.099 | 537 | 335 | 10 | 14 | 546 | 235 | 740 | 1.25e-63 | 226 |
MsG0380015178.01.T01 | MTR_2g105570 | 29.020 | 541 | 335 | 16 | 25 | 549 | 37 | 544 | 2.82e-49 | 179 |
MsG0380015178.01.T01 | MTR_4g057730 | 26.460 | 548 | 360 | 12 | 14 | 552 | 27 | 540 | 1.48e-45 | 169 |
MsG0380015178.01.T01 | MTR_5g007640 | 28.205 | 546 | 342 | 15 | 18 | 549 | 73 | 582 | 1.27e-44 | 167 |
MsG0380015178.01.T01 | MTR_2g095510 | 27.978 | 554 | 341 | 16 | 14 | 552 | 27 | 537 | 2.04e-43 | 163 |
MsG0380015178.01.T01 | MTR_8g039720 | 26.226 | 530 | 331 | 13 | 37 | 546 | 62 | 551 | 2.05e-42 | 160 |
MsG0380015178.01.T01 | MTR_3g035130 | 28.442 | 552 | 339 | 14 | 15 | 554 | 5 | 512 | 2.06e-41 | 157 |
MsG0380015178.01.T01 | MTR_1g026310 | 26.577 | 523 | 336 | 12 | 37 | 546 | 65 | 552 | 2.47e-41 | 157 |
MsG0380015178.01.T01 | MTR_3g460770 | 26.486 | 555 | 333 | 17 | 19 | 549 | 33 | 536 | 2.63e-40 | 154 |
MsG0380015178.01.T01 | MTR_4g077900 | 27.237 | 514 | 313 | 13 | 52 | 547 | 1 | 471 | 7.03e-40 | 152 |
MsG0380015178.01.T01 | MTR_1g063110 | 26.825 | 548 | 351 | 16 | 14 | 546 | 28 | 540 | 3.39e-39 | 151 |
MsG0380015178.01.T01 | MTR_4g005750 | 28.312 | 551 | 334 | 17 | 25 | 556 | 36 | 544 | 4.36e-39 | 150 |
MsG0380015178.01.T01 | MTR_4g128337 | 26.354 | 554 | 341 | 16 | 18 | 549 | 35 | 543 | 9.52e-38 | 147 |
MsG0380015178.01.T01 | MTR_1569s0010 | 32.249 | 369 | 213 | 11 | 192 | 548 | 186 | 529 | 2.29e-37 | 145 |
MsG0380015178.01.T01 | MTR_5g027500 | 26.602 | 515 | 331 | 13 | 49 | 547 | 78 | 561 | 9.71e-37 | 144 |
MsG0380015178.01.T01 | MTR_1g063120 | 26.259 | 556 | 348 | 16 | 14 | 546 | 28 | 544 | 1.38e-36 | 144 |
MsG0380015178.01.T01 | MTR_5g027480 | 26.742 | 531 | 324 | 17 | 36 | 547 | 64 | 548 | 1.20e-34 | 138 |
MsG0380015178.01.T01 | MTR_1g090737 | 25.849 | 530 | 334 | 16 | 43 | 556 | 82 | 568 | 8.81e-34 | 135 |
MsG0380015178.01.T01 | MTR_4g057730 | 25.636 | 472 | 313 | 12 | 14 | 475 | 27 | 470 | 1.52e-33 | 134 |
MsG0380015178.01.T01 | MTR_3g035130 | 27.812 | 489 | 309 | 11 | 15 | 492 | 5 | 460 | 2.01e-32 | 130 |
MsG0380015178.01.T01 | MTR_3g088880 | 27.989 | 368 | 223 | 8 | 194 | 546 | 208 | 548 | 6.65e-32 | 130 |
MsG0380015178.01.T01 | MTR_3g088870 | 27.945 | 365 | 230 | 7 | 194 | 546 | 207 | 550 | 9.28e-32 | 130 |
MsG0380015178.01.T01 | MTR_1g073180 | 24.470 | 519 | 335 | 9 | 39 | 549 | 60 | 529 | 1.10e-31 | 129 |
MsG0380015178.01.T01 | MTR_2g030240 | 24.954 | 541 | 347 | 16 | 39 | 547 | 27 | 540 | 5.26e-31 | 127 |
MsG0380015178.01.T01 | MTR_4g011790 | 27.226 | 393 | 245 | 11 | 179 | 547 | 217 | 592 | 5.91e-30 | 125 |
MsG0380015178.01.T01 | MTR_4g011790 | 27.157 | 394 | 246 | 11 | 179 | 548 | 217 | 593 | 8.83e-30 | 124 |
MsG0380015178.01.T01 | MTR_1054s0020 | 26.022 | 538 | 336 | 18 | 27 | 551 | 281 | 769 | 1.01e-29 | 125 |
MsG0380015178.01.T01 | MTR_4g013210 | 27.551 | 392 | 228 | 14 | 189 | 547 | 71 | 439 | 1.06e-28 | 119 |
MsG0380015178.01.T01 | MTR_2g030240 | 27.273 | 396 | 255 | 13 | 180 | 550 | 62 | 449 | 1.59e-28 | 119 |
MsG0380015178.01.T01 | MTR_4g011790 | 26.185 | 401 | 248 | 10 | 179 | 547 | 217 | 601 | 3.92e-28 | 119 |
MsG0380015178.01.T01 | MTR_4g057730 | 24.615 | 455 | 305 | 12 | 14 | 458 | 27 | 453 | 3.71e-27 | 115 |
MsG0380015178.01.T01 | MTR_1g073180 | 23.770 | 488 | 315 | 9 | 39 | 518 | 82 | 520 | 5.61e-26 | 112 |
MsG0380015178.01.T01 | MTR_1586s0010 | 25.806 | 372 | 247 | 12 | 39 | 400 | 69 | 421 | 2.20e-25 | 109 |
MsG0380015178.01.T01 | MTR_2g095510 | 27.171 | 449 | 276 | 15 | 14 | 447 | 27 | 439 | 7.35e-25 | 108 |
MsG0380015178.01.T01 | MTR_4g013210 | 26.842 | 380 | 205 | 15 | 189 | 547 | 71 | 398 | 1.19e-24 | 107 |
MsG0380015178.01.T01 | MTR_4g013210 | 26.596 | 376 | 211 | 15 | 189 | 547 | 223 | 550 | 6.18e-24 | 106 |
MsG0380015178.01.T01 | MTR_4g013210 | 27.446 | 368 | 211 | 14 | 189 | 523 | 223 | 567 | 3.37e-22 | 100 |
MsG0380015178.01.T01 | MTR_7g084850 | 23.845 | 541 | 359 | 18 | 40 | 550 | 203 | 720 | 5.36e-20 | 94.7 |
MsG0380015178.01.T01 | MTR_1g086600 | 24.593 | 492 | 283 | 19 | 41 | 469 | 100 | 566 | 9.07e-20 | 94.0 |
MsG0380015178.01.T01 | MTR_8g099420 | 23.838 | 495 | 267 | 21 | 41 | 462 | 81 | 538 | 3.90e-17 | 85.5 |
MsG0380015178.01.T01 | MTR_1g026470 | 27.070 | 314 | 203 | 8 | 37 | 339 | 65 | 363 | 7.51e-17 | 83.6 |
MsG0380015178.01.T01 | MTR_1g026430 | 26.752 | 314 | 204 | 8 | 37 | 339 | 65 | 363 | 1.09e-16 | 82.8 |
MsG0380015178.01.T01 | MTR_3g087980 | 25.408 | 429 | 218 | 16 | 141 | 484 | 197 | 608 | 1.83e-15 | 80.1 |
MsG0380015178.01.T01 | MTR_7g109830 | 29.439 | 214 | 137 | 6 | 259 | 469 | 340 | 542 | 2.84e-13 | 73.2 |
MsG0380015178.01.T01 | MTR_5g009350 | 21.538 | 520 | 297 | 18 | 41 | 488 | 80 | 560 | 4.24e-13 | 72.4 |
MsG0380015178.01.T01 | MTR_5g009350 | 21.497 | 521 | 292 | 18 | 41 | 480 | 80 | 564 | 5.21e-13 | 72.4 |
MsG0380015178.01.T01 | MTR_5g009350 | 21.497 | 521 | 292 | 18 | 41 | 480 | 80 | 564 | 5.36e-13 | 72.4 |
MsG0380015178.01.T01 | MTR_5g009350 | 21.457 | 508 | 291 | 17 | 41 | 476 | 80 | 551 | 8.20e-13 | 71.6 |
MsG0380015178.01.T01 | MTR_1g034360 | 20.492 | 488 | 307 | 14 | 40 | 469 | 79 | 543 | 2.24e-12 | 70.5 |
MsG0380015178.01.T01 | MTR_1g030290 | 32.948 | 173 | 94 | 6 | 306 | 469 | 424 | 583 | 1.04e-11 | 68.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0380015178.01.T01 | AT1G65890 | 60.549 | 583 | 217 | 5 | 1 | 575 | 1 | 578 | 0.0 | 715 |
MsG0380015178.01.T01 | AT1G65880 | 61.754 | 570 | 201 | 5 | 1 | 560 | 1 | 563 | 0.0 | 715 |
MsG0380015178.01.T01 | AT1G66120 | 59.036 | 581 | 223 | 4 | 1 | 575 | 1 | 572 | 0.0 | 703 |
MsG0380015178.01.T01 | AT1G68270 | 53.509 | 570 | 217 | 7 | 1 | 560 | 1 | 532 | 0.0 | 584 |
MsG0380015178.01.T01 | AT1G20560 | 50.265 | 567 | 264 | 4 | 1 | 563 | 3 | 555 | 0.0 | 581 |
MsG0380015178.01.T01 | AT3G16910 | 52.330 | 558 | 252 | 8 | 1 | 551 | 9 | 559 | 0.0 | 566 |
MsG0380015178.01.T01 | AT5G16340 | 48.925 | 558 | 262 | 6 | 1 | 551 | 1 | 542 | 0.0 | 558 |
MsG0380015178.01.T01 | AT1G21530 | 50.364 | 550 | 258 | 7 | 9 | 553 | 9 | 548 | 0.0 | 555 |
MsG0380015178.01.T01 | AT2G17650 | 49.286 | 560 | 264 | 4 | 1 | 550 | 48 | 597 | 0.0 | 553 |
MsG0380015178.01.T01 | AT5G16370 | 48.387 | 558 | 265 | 5 | 1 | 551 | 1 | 542 | 0.0 | 553 |
MsG0380015178.01.T01 | AT1G21530 | 50.364 | 550 | 256 | 8 | 9 | 553 | 9 | 546 | 0.0 | 548 |
MsG0380015178.01.T01 | AT1G21540 | 49.458 | 554 | 258 | 8 | 9 | 553 | 9 | 549 | 0.0 | 540 |
MsG0380015178.01.T01 | AT1G75960 | 48.474 | 557 | 266 | 5 | 1 | 551 | 1 | 542 | 0.0 | 532 |
MsG0380015178.01.T01 | AT1G77240 | 46.964 | 560 | 274 | 8 | 1 | 553 | 1 | 544 | 0.0 | 528 |
MsG0380015178.01.T01 | AT1G20560 | 50.102 | 491 | 227 | 4 | 77 | 563 | 1 | 477 | 3.79e-172 | 497 |
MsG0380015178.01.T01 | AT1G76290 | 45.144 | 556 | 279 | 8 | 1 | 551 | 1 | 535 | 4.69e-155 | 456 |
MsG0380015178.01.T01 | AT3G21240 | 29.063 | 523 | 327 | 13 | 37 | 549 | 61 | 549 | 1.74e-49 | 180 |
MsG0380015178.01.T01 | AT4G05160 | 27.076 | 554 | 345 | 14 | 17 | 552 | 30 | 542 | 4.24e-45 | 168 |
MsG0380015178.01.T01 | AT1G20510 | 27.687 | 549 | 329 | 20 | 18 | 546 | 36 | 536 | 8.91e-45 | 167 |
MsG0380015178.01.T01 | AT1G51680 | 29.197 | 548 | 337 | 16 | 19 | 549 | 43 | 556 | 1.88e-44 | 166 |
MsG0380015178.01.T01 | AT1G20500 | 25.046 | 543 | 351 | 14 | 18 | 546 | 42 | 542 | 5.51e-43 | 162 |
MsG0380015178.01.T01 | AT1G20480 | 27.481 | 524 | 328 | 16 | 37 | 546 | 72 | 557 | 1.79e-42 | 161 |
MsG0380015178.01.T01 | AT4G19010 | 26.642 | 533 | 336 | 15 | 31 | 547 | 62 | 555 | 1.81e-42 | 161 |
MsG0380015178.01.T01 | AT3G21230 | 28.843 | 527 | 327 | 12 | 37 | 549 | 71 | 563 | 5.22e-42 | 159 |
MsG0380015178.01.T01 | AT1G65060 | 27.920 | 548 | 339 | 18 | 18 | 549 | 52 | 559 | 5.82e-41 | 156 |
MsG0380015178.01.T01 | AT5G63380 | 26.190 | 546 | 326 | 16 | 17 | 546 | 66 | 550 | 1.11e-40 | 155 |
MsG0380015178.01.T01 | AT3G48990 | 27.969 | 522 | 309 | 14 | 40 | 543 | 31 | 503 | 2.02e-38 | 148 |
MsG0380015178.01.T01 | AT5G38120 | 26.972 | 545 | 337 | 17 | 18 | 546 | 43 | 542 | 2.67e-38 | 149 |
MsG0380015178.01.T01 | AT1G51680 | 28.627 | 517 | 318 | 16 | 19 | 518 | 43 | 525 | 4.09e-38 | 148 |
MsG0380015178.01.T01 | AT3G21240 | 28.667 | 450 | 284 | 12 | 37 | 476 | 61 | 483 | 1.33e-37 | 145 |
MsG0380015178.01.T01 | AT3G21240 | 28.667 | 450 | 284 | 12 | 37 | 476 | 61 | 483 | 1.33e-37 | 145 |
MsG0380015178.01.T01 | AT1G20510 | 28.033 | 478 | 283 | 18 | 18 | 475 | 36 | 472 | 1.12e-36 | 143 |
MsG0380015178.01.T01 | AT5G38120 | 26.886 | 517 | 317 | 17 | 18 | 518 | 43 | 514 | 1.40e-33 | 134 |
MsG0380015178.01.T01 | AT1G30520 | 25.090 | 554 | 373 | 14 | 20 | 549 | 13 | 548 | 3.50e-33 | 134 |
MsG0380015178.01.T01 | AT1G30520 | 25.090 | 554 | 373 | 14 | 20 | 549 | 13 | 548 | 3.50e-33 | 134 |
MsG0380015178.01.T01 | AT1G51680 | 28.632 | 475 | 295 | 15 | 19 | 476 | 43 | 490 | 2.16e-32 | 130 |
MsG0380015178.01.T01 | AT1G62940 | 26.250 | 560 | 339 | 16 | 14 | 549 | 26 | 535 | 2.33e-32 | 131 |
MsG0380015178.01.T01 | AT3G21230 | 27.621 | 496 | 311 | 12 | 37 | 518 | 71 | 532 | 3.22e-32 | 131 |
MsG0380015178.01.T01 | AT1G20510 | 27.778 | 450 | 264 | 18 | 18 | 447 | 36 | 444 | 2.39e-30 | 124 |
MsG0380015178.01.T01 | AT5G38120 | 26.160 | 474 | 296 | 13 | 18 | 475 | 43 | 478 | 3.64e-29 | 121 |
MsG0380015178.01.T01 | AT5G38120 | 26.160 | 474 | 296 | 13 | 18 | 475 | 43 | 478 | 3.64e-29 | 121 |
MsG0380015178.01.T01 | AT3G21230 | 27.533 | 454 | 288 | 11 | 37 | 476 | 71 | 497 | 3.50e-27 | 115 |
MsG0380015178.01.T01 | AT1G65060 | 27.578 | 446 | 274 | 17 | 18 | 447 | 52 | 464 | 4.38e-27 | 115 |
MsG0380015178.01.T01 | AT3G16170 | 25.065 | 387 | 241 | 11 | 189 | 547 | 236 | 601 | 1.64e-24 | 108 |
MsG0380015178.01.T01 | AT1G20490 | 25.971 | 412 | 262 | 15 | 37 | 436 | 61 | 441 | 2.84e-23 | 103 |
MsG0380015178.01.T01 | AT1G20490 | 25.971 | 412 | 262 | 15 | 37 | 436 | 61 | 441 | 2.84e-23 | 103 |
MsG0380015178.01.T01 | AT1G30520 | 23.881 | 469 | 319 | 12 | 20 | 471 | 13 | 460 | 3.50e-21 | 97.4 |
MsG0380015178.01.T01 | AT1G30520 | 23.881 | 469 | 319 | 12 | 20 | 471 | 13 | 460 | 3.50e-21 | 97.4 |
MsG0380015178.01.T01 | AT1G64400 | 24.903 | 514 | 286 | 22 | 28 | 472 | 65 | 547 | 8.87e-21 | 97.1 |
MsG0380015178.01.T01 | AT4G23850 | 24.324 | 518 | 281 | 20 | 41 | 480 | 81 | 565 | 4.17e-19 | 91.7 |
MsG0380015178.01.T01 | AT5G36880 | 24.074 | 594 | 383 | 20 | 25 | 579 | 177 | 741 | 2.22e-18 | 89.7 |
MsG0380015178.01.T01 | AT5G36880 | 24.456 | 597 | 377 | 21 | 25 | 579 | 127 | 691 | 2.37e-18 | 89.4 |
MsG0380015178.01.T01 | AT5G36880 | 24.456 | 597 | 377 | 21 | 25 | 579 | 127 | 691 | 2.37e-18 | 89.4 |
MsG0380015178.01.T01 | AT5G36880 | 24.456 | 597 | 377 | 21 | 25 | 579 | 127 | 691 | 2.37e-18 | 89.4 |
MsG0380015178.01.T01 | AT5G36880 | 24.456 | 597 | 377 | 21 | 25 | 579 | 127 | 691 | 2.37e-18 | 89.4 |
MsG0380015178.01.T01 | AT4G14070 | 21.658 | 591 | 321 | 23 | 20 | 501 | 102 | 659 | 8.39e-13 | 72.0 |
MsG0380015178.01.T01 | AT4G11030 | 31.313 | 198 | 108 | 10 | 281 | 472 | 372 | 547 | 2.32e-12 | 70.5 |
MsG0380015178.01.T01 | AT1G77590 | 32.558 | 172 | 96 | 6 | 306 | 469 | 274 | 433 | 1.36e-11 | 67.8 |
MsG0380015178.01.T01 | AT1G77590 | 32.558 | 172 | 96 | 6 | 306 | 469 | 420 | 579 | 1.79e-11 | 67.4 |
MsG0380015178.01.T01 | AT2G04350 | 30.418 | 263 | 138 | 13 | 306 | 551 | 449 | 683 | 2.95e-11 | 67.0 |
MsG0380015178.01.T01 | AT2G04350 | 30.418 | 263 | 138 | 13 | 306 | 551 | 449 | 683 | 2.95e-11 | 67.0 |
Find 150 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAGAATTTACCACACTTTA+TGG | 0.126746 | 3:-66285849 | MsG0380015178.01.T01:CDS |
TCTAAAGATGTGATTATTTC+AGG | 0.185792 | 3:-66286067 | MsG0380015178.01.T01:CDS |
CAAGGACTTTCACCCCATTT+TGG | 0.195490 | 3:+66285956 | None:intergenic |
TGTCACATTATAGAGATTTA+TGG | 0.205886 | 3:+66286585 | None:intergenic |
TATACATAAAGATGGTTATT+TGG | 0.207931 | 3:-66286104 | MsG0380015178.01.T01:CDS |
ATTTCTTCAGGAAGGTAATT+TGG | 0.214710 | 3:+66286868 | None:intergenic |
ATCTTACCTGTTAAAGTCTT+TGG | 0.233560 | 3:+66285794 | None:intergenic |
TTATGATTGACTTGATTATT+AGG | 0.237452 | 3:+66285704 | None:intergenic |
GCTCTCATCAAGAAAGTTAA+AGG | 0.239728 | 3:+66287727 | None:intergenic |
AAGCGACGGCGAAAGCTTTC+GGG | 0.254708 | 3:-66286159 | MsG0380015178.01.T01:CDS |
AAATGACTCAAATTAAATTA+TGG | 0.260323 | 3:+66285400 | None:intergenic |
GTATAGTTTGCTCCACATTT+TGG | 0.280265 | 3:+66287760 | None:intergenic |
TTTAATGTAACACATGCTTA+TGG | 0.280910 | 3:-66286418 | MsG0380015178.01.T01:CDS |
GATTTACCAAAGACTTTAAC+AGG | 0.288395 | 3:-66285800 | MsG0380015178.01.T01:CDS |
TTGCAATGCCACATCCAAAA+TGG | 0.295462 | 3:-66285970 | MsG0380015178.01.T01:CDS |
AATAAAACAGGTATCAGTTT+TGG | 0.306205 | 3:-66287205 | MsG0380015178.01.T01:intron |
TGACTATAAACAACACCTTT+TGG | 0.314032 | 3:+66286790 | None:intergenic |
GAAAGTTAAAGGAGTGAGTA+TGG | 0.331539 | 3:+66287738 | None:intergenic |
CATTCATCTTGAATTTCTTC+AGG | 0.339619 | 3:+66286856 | None:intergenic |
GAAGCGACGGCGAAAGCTTT+CGG | 0.344503 | 3:-66286160 | MsG0380015178.01.T01:CDS |
TTTAATCCTTGGTTGGGAAA+TGG | 0.345052 | 3:-66286740 | MsG0380015178.01.T01:CDS |
TTCTTCCATGAGTAATCTTA+AGG | 0.361126 | 3:+66287011 | None:intergenic |
TCATAATAATGACCAGCTTA+TGG | 0.364109 | 3:-66285687 | MsG0380015178.01.T01:CDS |
GGTAATGTCCATAGATAAAC+TGG | 0.364652 | 3:+66286709 | None:intergenic |
GTTAGTTGTTTCCACTTAGT+AGG | 0.368641 | 3:-66285446 | MsG0380015178.01.T01:three_prime_UTR |
CGCATTGAGACGGTGGTTGA+TGG | 0.387285 | 3:+66287116 | None:intergenic |
TCATACATTGCTGGAATGTT+TGG | 0.387598 | 3:+66287180 | None:intergenic |
TAAAATAATATTGAAAATGA+TGG | 0.388005 | 3:+66286546 | None:intergenic |
AAGTGAAACGGGTTCCTTCA+TGG | 0.397922 | 3:+66287671 | None:intergenic |
TACCACAAAACACTTAGCTT+TGG | 0.397967 | 3:+66285751 | None:intergenic |
TGGTAAATTCTTCCTACAAT+AGG | 0.411253 | 3:+66285859 | None:intergenic |
TATGGACTAACTGAAGCAAC+AGG | 0.418017 | 3:-66286400 | MsG0380015178.01.T01:CDS |
GTAAGAGATGGGAAAACAAT+GGG | 0.423096 | 3:-66286235 | MsG0380015178.01.T01:CDS |
GATGTGTAATTCAATGTAAT+TGG | 0.423792 | 3:+66286829 | None:intergenic |
TTTGAGTTTAATCCTTGGTT+GGG | 0.424831 | 3:-66286746 | MsG0380015178.01.T01:CDS |
TTAATCCTTGGTTGGGAAAT+GGG | 0.425386 | 3:-66286739 | MsG0380015178.01.T01:CDS |
TTTGTGAGTGGCAGAAGAAA+TGG | 0.427336 | 3:-66286366 | MsG0380015178.01.T01:CDS |
TTACCTATGTTCCATTGTAA+TGG | 0.427373 | 3:-66286691 | MsG0380015178.01.T01:CDS |
GAGCTCGCCTAGCCGGATTC+CGG | 0.428306 | 3:+66286921 | None:intergenic |
TCTCCGGTGAATATACTAAC+TGG | 0.428686 | 3:-66286490 | MsG0380015178.01.T01:CDS |
CTTCATGGATGACTGAGGTT+CGG | 0.429624 | 3:+66287686 | None:intergenic |
AAATGCATCTCATACATTGC+TGG | 0.433221 | 3:+66287171 | None:intergenic |
GTTATTTGGAAATTAAAGAT+AGG | 0.433555 | 3:-66286090 | MsG0380015178.01.T01:CDS |
GACGGTGGTTGATGGTGTTT+AGG | 0.435440 | 3:+66287124 | None:intergenic |
TGCAATGCCACATCCAAAAT+GGG | 0.443909 | 3:-66285969 | MsG0380015178.01.T01:CDS |
GTAGTGAACCAGTTTATCTA+TGG | 0.450766 | 3:-66286717 | MsG0380015178.01.T01:CDS |
GGGGATGGTTGGTTTAGAAC+TGG | 0.460142 | 3:-66286139 | MsG0380015178.01.T01:CDS |
ACACTTTATGGTACCTAAGA+TGG | 0.462947 | 3:-66285837 | MsG0380015178.01.T01:CDS |
GAGATTATGTTGAAGGGAAG+TGG | 0.465461 | 3:-66286211 | MsG0380015178.01.T01:CDS |
AGTTTGTGACCAAGTGAAAC+GGG | 0.471117 | 3:+66287660 | None:intergenic |
CTGAAGAAATTCAAGATGAA+TGG | 0.471358 | 3:-66286855 | MsG0380015178.01.T01:CDS |
ATGGAGAGTGTGGTAAGAGA+TGG | 0.472523 | 3:-66286247 | MsG0380015178.01.T01:CDS |
GAAACAACTAACAAGAAAGT+TGG | 0.473458 | 3:+66285457 | None:intergenic |
TAAACACTCCCACCGGAATC+CGG | 0.473541 | 3:-66286933 | MsG0380015178.01.T01:CDS |
CTATGTTCCATTGTAATGGT+TGG | 0.477230 | 3:-66286687 | MsG0380015178.01.T01:CDS |
CTTTGAGTTTAATCCTTGGT+TGG | 0.482972 | 3:-66286747 | MsG0380015178.01.T01:CDS |
CGAAAGCTTTCGGGGATGGT+TGG | 0.487803 | 3:-66286150 | MsG0380015178.01.T01:CDS |
CGCCTCAGAGTGTCGAAGAA+TGG | 0.487931 | 3:+66287080 | None:intergenic |
AAGTTTGTGACCAAGTGAAA+CGG | 0.494196 | 3:+66287659 | None:intergenic |
ACGGCGAAAGCTTTCGGGGA+TGG | 0.495228 | 3:-66286154 | MsG0380015178.01.T01:CDS |
TTCACACTTCAACAATTTGA+GGG | 0.495504 | 3:-66285567 | MsG0380015178.01.T01:three_prime_UTR |
TGCCACTCACAAACAAGTGC+TGG | 0.499001 | 3:+66286376 | None:intergenic |
TGGTTTAGAACTGGTGATGT+TGG | 0.499794 | 3:-66286130 | MsG0380015178.01.T01:CDS |
ATGAGATAATTACCTATTGT+AGG | 0.504104 | 3:-66285871 | MsG0380015178.01.T01:CDS |
TGGAGAGTGTGGTAAGAGAT+GGG | 0.505965 | 3:-66286246 | MsG0380015178.01.T01:CDS |
ATTCGTATCAAAAGCAAAAG+AGG | 0.506420 | 3:-66287034 | MsG0380015178.01.T01:CDS |
AAGGGAAGTGGAATCATGAT+GGG | 0.506638 | 3:-66286199 | MsG0380015178.01.T01:CDS |
GTTCACACTTCAACAATTTG+AGG | 0.509906 | 3:-66285568 | MsG0380015178.01.T01:three_prime_UTR |
ACAGCAGCTTCTAAAACCTT+AGG | 0.514521 | 3:+66285995 | None:intergenic |
TGCAATATTGAGAGCACGGA+GGG | 0.514867 | 3:+66287609 | None:intergenic |
CATCTTGAATTTCTTCAGGA+AGG | 0.517226 | 3:+66286860 | None:intergenic |
AGGAAGCGAGGCGGCGACAC+CGG | 0.518047 | 3:+66287632 | None:intergenic |
AGAGGCCTTAAGATTACTCA+TGG | 0.518068 | 3:-66287016 | MsG0380015178.01.T01:CDS |
CGTATTCGAGCTCGCCTAGC+CGG | 0.519450 | 3:+66286914 | None:intergenic |
CTTGAGAAAATCGAGCCACT+TGG | 0.519790 | 3:-66286442 | MsG0380015178.01.T01:CDS |
ATGAAGGAACCCGTTTCACT+TGG | 0.520277 | 3:-66287669 | MsG0380015178.01.T01:CDS |
ATCTGCTTCAGCTTGTTATG+TGG | 0.520395 | 3:-66285517 | MsG0380015178.01.T01:three_prime_UTR |
AGTACTTTGAGTTTAATCCT+TGG | 0.521867 | 3:-66286751 | MsG0380015178.01.T01:CDS |
CTCGCCTAGCCGGATTCCGG+TGG | 0.524552 | 3:+66286924 | None:intergenic |
ATTACATTGAATTACACATC+AGG | 0.525480 | 3:-66286826 | MsG0380015178.01.T01:CDS |
CGAGCTCGAATACGAGCAAA+TGG | 0.527362 | 3:-66286905 | MsG0380015178.01.T01:CDS |
TGTTCTTTATAGTCATCCTA+AGG | 0.533616 | 3:-66286011 | MsG0380015178.01.T01:CDS |
CGATGCTTAAAGCGCGACAA+GGG | 0.533885 | 3:-66286318 | MsG0380015178.01.T01:CDS |
AACTGGTGGAGCACCACCCC+CGG | 0.535495 | 3:-66286473 | MsG0380015178.01.T01:CDS |
TGTGACACTAAGGAAGAATG+AGG | 0.538924 | 3:-66285927 | MsG0380015178.01.T01:CDS |
GAAGGGAAGTGGAATCATGA+TGG | 0.539328 | 3:-66286200 | MsG0380015178.01.T01:CDS |
AAAATAATATTGAAAATGAT+GGG | 0.545393 | 3:+66286547 | None:intergenic |
GTTGGTGTTATACATAAAGA+TGG | 0.545404 | 3:-66286112 | MsG0380015178.01.T01:CDS |
AAAGAGAGTCATAAAATCTC+CGG | 0.548039 | 3:-66286506 | MsG0380015178.01.T01:CDS |
GACGAGATAGAGCCATAAGC+TGG | 0.550059 | 3:+66285675 | None:intergenic |
TCGAAGAATGGTGGCTATGT+TGG | 0.554863 | 3:+66287092 | None:intergenic |
CAACCATTACAATGGAACAT+AGG | 0.559310 | 3:+66286688 | None:intergenic |
CACTACCCATTTCCCAACCA+AGG | 0.560736 | 3:+66286734 | None:intergenic |
CACGGAGGGAGGAAGCGAGG+CGG | 0.564152 | 3:+66287623 | None:intergenic |
GGTACAACTTCAGAACCAAA+AGG | 0.565976 | 3:-66286805 | MsG0380015178.01.T01:CDS |
TCTTTGCAATATTGAGAGCA+CGG | 0.566149 | 3:+66287605 | None:intergenic |
TACGAGCAAATGGTTCATCA+TGG | 0.574224 | 3:-66286895 | MsG0380015178.01.T01:CDS |
GTAATGGTTGGACATTCACT+TGG | 0.575202 | 3:-66286675 | MsG0380015178.01.T01:CDS |
CTTGGTCACAAACTTATGAC+CGG | 0.576665 | 3:-66287651 | MsG0380015178.01.T01:CDS |
CATCTATCACAATCACTAGT+GGG | 0.580127 | 3:+66286959 | None:intergenic |
GATGGTGTTTAGGACAGCAC+CGG | 0.583797 | 3:+66287134 | None:intergenic |
TAATGGTTGGACATTCACTT+GGG | 0.583819 | 3:-66286674 | MsG0380015178.01.T01:CDS |
GTAACTACAACTAATTCCAA+TGG | 0.584509 | 3:-66287791 | MsG0380015178.01.T01:exon |
TTTAGGACAGCACCGGCCAT+AGG | 0.587665 | 3:+66287141 | None:intergenic |
GAGCACGGAGGGAGGAAGCG+AGG | 0.588763 | 3:+66287620 | None:intergenic |
GTTGTAGTTACCTAAGTGAG+AGG | 0.592569 | 3:+66287803 | None:intergenic |
TCTTGAAACAATGGAGAGTG+TGG | 0.595422 | 3:-66286257 | MsG0380015178.01.T01:CDS |
GGCCAGCACTTGTTTGTGAG+TGG | 0.595693 | 3:-66286378 | MsG0380015178.01.T01:CDS |
GGTGTTGTTTATAGTCATAG+AGG | 0.595730 | 3:-66286784 | MsG0380015178.01.T01:CDS |
TCATCTATCACAATCACTAG+TGG | 0.596057 | 3:+66286958 | None:intergenic |
TGTGAAGAATCTTGAAACAA+TGG | 0.596126 | 3:-66286266 | MsG0380015178.01.T01:CDS |
AAATTATGGAAGATATAACT+AGG | 0.597180 | 3:+66285414 | None:intergenic |
ACTCCCACCGGAATCCGGCT+AGG | 0.597247 | 3:-66286928 | MsG0380015178.01.T01:CDS |
AGCGACGGCGAAAGCTTTCG+GGG | 0.597981 | 3:-66286158 | MsG0380015178.01.T01:CDS |
CGAACCTCAGTCATCCATGA+AGG | 0.598539 | 3:-66287685 | MsG0380015178.01.T01:CDS |
AAGAGATGGGAAAACAATGG+GGG | 0.600740 | 3:-66286233 | MsG0380015178.01.T01:CDS |
TTTCTCAAGTAGGGACGCCG+GGG | 0.601501 | 3:+66286456 | None:intergenic |
CTATGTTGGCCGCATTGAGA+CGG | 0.602111 | 3:+66287106 | None:intergenic |
GGACTGCTCAACCTACTAAG+TGG | 0.602551 | 3:+66285435 | None:intergenic |
TCGATGCTTAAAGCGCGACA+AGG | 0.604868 | 3:-66286319 | MsG0380015178.01.T01:CDS |
CCACCAGTTAGTATATTCAC+CGG | 0.607871 | 3:+66286487 | None:intergenic |
CTCAGAGTGTCGAAGAATGG+TGG | 0.608683 | 3:+66287083 | None:intergenic |
TTGTAGTTACCTAAGTGAGA+GGG | 0.608900 | 3:+66287804 | None:intergenic |
TGAATGTCCAACCATTACAA+TGG | 0.613092 | 3:+66286680 | None:intergenic |
GGTAAGAGATGGGAAAACAA+TGG | 0.619269 | 3:-66286236 | MsG0380015178.01.T01:CDS |
ACTTGGGGTGTAGCTGCAAG+AGG | 0.619778 | 3:-66286658 | MsG0380015178.01.T01:CDS |
TAAGAGATGGGAAAACAATG+GGG | 0.626561 | 3:-66286234 | MsG0380015178.01.T01:CDS |
GATGCTTAAAGCGCGACAAG+GGG | 0.626984 | 3:-66286317 | MsG0380015178.01.T01:CDS |
TCGCCTAGCCGGATTCCGGT+GGG | 0.628633 | 3:+66286925 | None:intergenic |
ATGGATAACCTACCAAAATG+TGG | 0.629287 | 3:-66287772 | MsG0380015178.01.T01:CDS |
AATATTGAGAGCACGGAGGG+AGG | 0.632194 | 3:+66287612 | None:intergenic |
GATGACATAAACACTCCCAC+CGG | 0.634917 | 3:-66286940 | MsG0380015178.01.T01:CDS |
CTTAGTGTCACAAAAGCACA+AGG | 0.636960 | 3:+66285938 | None:intergenic |
TTCTCAAGTAGGGACGCCGG+GGG | 0.637975 | 3:+66286457 | None:intergenic |
TGTTGGCCGCATTGAGACGG+TGG | 0.638475 | 3:+66287109 | None:intergenic |
CACCATTCTTCGACACTCTG+AGG | 0.640216 | 3:-66287082 | MsG0380015178.01.T01:CDS |
TGTGTTACATTAAAACCAAG+TGG | 0.640733 | 3:+66286427 | None:intergenic |
AATGGTTGGACATTCACTTG+GGG | 0.644019 | 3:-66286673 | MsG0380015178.01.T01:CDS |
CCGGTGAATATACTAACTGG+TGG | 0.647354 | 3:-66286487 | MsG0380015178.01.T01:CDS |
AAAGATGTGATTATTTCAGG+AGG | 0.649768 | 3:-66286064 | MsG0380015178.01.T01:CDS |
TGATTCTTGTTGTGTTACTG+AGG | 0.660637 | 3:-66285894 | MsG0380015178.01.T01:CDS |
ATCTTAGGTACCATAAAGTG+TGG | 0.661614 | 3:+66285839 | None:intergenic |
AGGGAAGTGGAATCATGATG+GGG | 0.670807 | 3:-66286198 | MsG0380015178.01.T01:CDS |
GACACTAAGGAAGAATGAGG+AGG | 0.677688 | 3:-66285924 | MsG0380015178.01.T01:CDS |
TGGGGTGTAGCTGCAAGAGG+AGG | 0.680125 | 3:-66286655 | MsG0380015178.01.T01:CDS |
GGTTCCTTCATGGATGACTG+AGG | 0.686748 | 3:+66287681 | None:intergenic |
GCAATGCCACATCCAAAATG+GGG | 0.688593 | 3:-66285968 | MsG0380015178.01.T01:CDS |
ATGGACTAACTGAAGCAACA+GGG | 0.714883 | 3:-66286399 | MsG0380015178.01.T01:CDS |
TTGCAATATTGAGAGCACGG+AGG | 0.733139 | 3:+66287608 | None:intergenic |
CATCAACCACCGTCTCAATG+CGG | 0.733801 | 3:-66287115 | MsG0380015178.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATAATATTGAAAATGAT+GGG | + | Chr3:66286670-66286689 | None:intergenic | 10.0% |
!! | TAAAATAATATTGAAAATGA+TGG | + | Chr3:66286671-66286690 | None:intergenic | 10.0% |
!!! | ATCATTTTCAATATTATTTT+AGG | - | Chr3:66286670-66286689 | MsG0380015178.01.T01:CDS | 10.0% |
!! | AAAAAGTTCTTTATATATTG+TGG | + | Chr3:66287732-66287751 | None:intergenic | 15.0% |
!! | AAATGACTCAAATTAAATTA+TGG | + | Chr3:66287817-66287836 | None:intergenic | 15.0% |
!! | TATTACAATATTTGATATTG+CGG | + | Chr3:66285896-66285915 | None:intergenic | 15.0% |
!! | AAATTATGGAAGATATAACT+AGG | + | Chr3:66287803-66287822 | None:intergenic | 20.0% |
!! | GCGATTTATAAAAACTAAAT+TGG | - | Chr3:66285977-66285996 | MsG0380015178.01.T01:CDS | 20.0% |
!! | GTTATTTGGAAATTAAAGAT+AGG | - | Chr3:66287124-66287143 | MsG0380015178.01.T01:CDS | 20.0% |
!! | TATACATAAAGATGGTTATT+TGG | - | Chr3:66287110-66287129 | MsG0380015178.01.T01:CDS | 20.0% |
!!! | TGGTTTTTGTTTAATAAAAC+AGG | - | Chr3:66285997-66286016 | MsG0380015178.01.T01:CDS | 20.0% |
!!! | TTATGATTGACTTGATTATT+AGG | + | Chr3:66287513-66287532 | None:intergenic | 20.0% |
! | ATGAGATAATTACCTATTGT+AGG | - | Chr3:66287343-66287362 | MsG0380015178.01.T01:intron | 25.0% |
! | ATTACATTGAATTACACATC+AGG | - | Chr3:66286388-66286407 | MsG0380015178.01.T01:CDS | 25.0% |
! | CAAAATGCAGTATCAAATAT+TGG | + | Chr3:66285872-66285891 | None:intergenic | 25.0% |
! | GATGTGTAATTCAATGTAAT+TGG | + | Chr3:66286388-66286407 | None:intergenic | 25.0% |
! | TCTAAAGATGTGATTATTTC+AGG | - | Chr3:66287147-66287166 | MsG0380015178.01.T01:CDS | 25.0% |
! | TGTCACATTATAGAGATTTA+TGG | + | Chr3:66286632-66286651 | None:intergenic | 25.0% |
! | TTTAATGTAACACATGCTTA+TGG | - | Chr3:66286796-66286815 | MsG0380015178.01.T01:CDS | 25.0% |
!! | AATAAAACAGGTATCAGTTT+TGG | - | Chr3:66286009-66286028 | MsG0380015178.01.T01:CDS | 25.0% |
!!! | TTTTAAAGATAAAGAAGCGA+CGG | - | Chr3:66287041-66287060 | MsG0380015178.01.T01:CDS | 25.0% |
AAAGAGAGTCATAAAATCTC+CGG | - | Chr3:66286708-66286727 | MsG0380015178.01.T01:CDS | 30.0% | |
AAAGATGTGATTATTTCAGG+AGG | - | Chr3:66287150-66287169 | MsG0380015178.01.T01:CDS | 30.0% | |
ATCTTACCTGTTAAAGTCTT+TGG | + | Chr3:66287423-66287442 | None:intergenic | 30.0% | |
ATTCGTATCAAAAGCAAAAG+AGG | - | Chr3:66286180-66286199 | MsG0380015178.01.T01:CDS | 30.0% | |
ATTTCTTCAGGAAGGTAATT+TGG | + | Chr3:66286349-66286368 | None:intergenic | 30.0% | |
CATTCATCTTGAATTTCTTC+AGG | + | Chr3:66286361-66286380 | None:intergenic | 30.0% | |
CTGAAGAAATTCAAGATGAA+TGG | - | Chr3:66286359-66286378 | MsG0380015178.01.T01:CDS | 30.0% | |
GAAACAACTAACAAGAAAGT+TGG | + | Chr3:66287760-66287779 | None:intergenic | 30.0% | |
GAAGAATTTACCACACTTTA+TGG | - | Chr3:66287365-66287384 | MsG0380015178.01.T01:intron | 30.0% | |
GATTTACCAAAGACTTTAAC+AGG | - | Chr3:66287414-66287433 | MsG0380015178.01.T01:intron | 30.0% | |
GTAACTACAACTAATTCCAA+TGG | - | Chr3:66285423-66285442 | MsG0380015178.01.T01:three_prime_UTR | 30.0% | |
TCATAATAATGACCAGCTTA+TGG | - | Chr3:66287527-66287546 | MsG0380015178.01.T01:intron | 30.0% | |
TCCATAAAAACAACCATCTT+AGG | + | Chr3:66287393-66287412 | None:intergenic | 30.0% | |
TGATATCATATCCTAGATTG+CGG | + | Chr3:66285834-66285853 | None:intergenic | 30.0% | |
TGGTAAATTCTTCCTACAAT+AGG | + | Chr3:66287358-66287377 | None:intergenic | 30.0% | |
TGTGAAGAATCTTGAAACAA+TGG | - | Chr3:66286948-66286967 | MsG0380015178.01.T01:CDS | 30.0% | |
TGTGTTACATTAAAACCAAG+TGG | + | Chr3:66286790-66286809 | None:intergenic | 30.0% | |
TGTTCTTTATAGTCATCCTA+AGG | - | Chr3:66287203-66287222 | MsG0380015178.01.T01:intron | 30.0% | |
TTACCTATGTTCCATTGTAA+TGG | - | Chr3:66286523-66286542 | MsG0380015178.01.T01:CDS | 30.0% | |
TTCACACTTCAACAATTTGA+GGG | - | Chr3:66287647-66287666 | MsG0380015178.01.T01:CDS | 30.0% | |
TTCTTCCATGAGTAATCTTA+AGG | + | Chr3:66286206-66286225 | None:intergenic | 30.0% | |
! | AGTACTTTGAGTTTAATCCT+TGG | - | Chr3:66286463-66286482 | MsG0380015178.01.T01:CDS | 30.0% |
! | TGACTATAAACAACACCTTT+TGG | + | Chr3:66286427-66286446 | None:intergenic | 30.0% |
! | TTTGAGTTTAATCCTTGGTT+GGG | - | Chr3:66286468-66286487 | MsG0380015178.01.T01:CDS | 30.0% |
!! | GTTGGTGTTATACATAAAGA+TGG | - | Chr3:66287102-66287121 | MsG0380015178.01.T01:CDS | 30.0% |
!!! | ACCTAAGATGGTTGTTTTTA+TGG | - | Chr3:66287389-66287408 | MsG0380015178.01.T01:intron | 30.0% |
!!! | TAAGATGGTTGTTTTTATGG+AGG | - | Chr3:66287392-66287411 | MsG0380015178.01.T01:intron | 30.0% |
AAATGCATCTCATACATTGC+TGG | + | Chr3:66286046-66286065 | None:intergenic | 35.0% | |
AAGTTTGTGACCAAGTGAAA+CGG | + | Chr3:66285558-66285577 | None:intergenic | 35.0% | |
ACACTTTATGGTACCTAAGA+TGG | - | Chr3:66287377-66287396 | MsG0380015178.01.T01:intron | 35.0% | |
ATCTTAGGTACCATAAAGTG+TGG | + | Chr3:66287378-66287397 | None:intergenic | 35.0% | |
ATGGATAACCTACCAAAATG+TGG | - | Chr3:66285442-66285461 | MsG0380015178.01.T01:three_prime_UTR | 35.0% | |
CAACCATTACAATGGAACAT+AGG | + | Chr3:66286529-66286548 | None:intergenic | 35.0% | |
CATCTATCACAATCACTAGT+GGG | + | Chr3:66286258-66286277 | None:intergenic | 35.0% | |
CATCTTGAATTTCTTCAGGA+AGG | + | Chr3:66286357-66286376 | None:intergenic | 35.0% | |
CTATGTTCCATTGTAATGGT+TGG | - | Chr3:66286527-66286546 | MsG0380015178.01.T01:CDS | 35.0% | |
GAAAGTTAAAGGAGTGAGTA+TGG | + | Chr3:66285479-66285498 | None:intergenic | 35.0% | |
GCTCTCATCAAGAAAGTTAA+AGG | + | Chr3:66285490-66285509 | None:intergenic | 35.0% | |
GGTAATGTCCATAGATAAAC+TGG | + | Chr3:66286508-66286527 | None:intergenic | 35.0% | |
GTAAGAGATGGGAAAACAAT+GGG | - | Chr3:66286979-66286998 | MsG0380015178.01.T01:CDS | 35.0% | |
GTAGTGAACCAGTTTATCTA+TGG | - | Chr3:66286497-66286516 | MsG0380015178.01.T01:CDS | 35.0% | |
GTTCACACTTCAACAATTTG+AGG | - | Chr3:66287646-66287665 | MsG0380015178.01.T01:CDS | 35.0% | |
TAAGAGATGGGAAAACAATG+GGG | - | Chr3:66286980-66286999 | MsG0380015178.01.T01:CDS | 35.0% | |
TAATGGTTGGACATTCACTT+GGG | - | Chr3:66286540-66286559 | MsG0380015178.01.T01:CDS | 35.0% | |
TACCACAAAACACTTAGCTT+TGG | + | Chr3:66287466-66287485 | None:intergenic | 35.0% | |
TCATACATTGCTGGAATGTT+TGG | + | Chr3:66286037-66286056 | None:intergenic | 35.0% | |
TCATCTATCACAATCACTAG+TGG | + | Chr3:66286259-66286278 | None:intergenic | 35.0% | |
TCTTTGCAATATTGAGAGCA+CGG | + | Chr3:66285612-66285631 | None:intergenic | 35.0% | |
TGAATGTCCAACCATTACAA+TGG | + | Chr3:66286537-66286556 | None:intergenic | 35.0% | |
TTAATCCTTGGTTGGGAAAT+GGG | - | Chr3:66286475-66286494 | MsG0380015178.01.T01:CDS | 35.0% | |
TTGTAGTTACCTAAGTGAGA+GGG | + | Chr3:66285413-66285432 | None:intergenic | 35.0% | |
TTTAATCCTTGGTTGGGAAA+TGG | - | Chr3:66286474-66286493 | MsG0380015178.01.T01:CDS | 35.0% | |
! | CTTTGAGTTTAATCCTTGGT+TGG | - | Chr3:66286467-66286486 | MsG0380015178.01.T01:CDS | 35.0% |
! | GTTAGTTGTTTCCACTTAGT+AGG | - | Chr3:66287768-66287787 | MsG0380015178.01.T01:CDS | 35.0% |
! | TGATTCTTGTTGTGTTACTG+AGG | - | Chr3:66287320-66287339 | MsG0380015178.01.T01:intron | 35.0% |
! | TTTATGACTCTCTTTTCGCT+TGG | + | Chr3:66286703-66286722 | None:intergenic | 35.0% |
!! | CATTTTGGTAGGTTATCCAT+TGG | + | Chr3:66285442-66285461 | None:intergenic | 35.0% |
!! | GGTGTTGTTTATAGTCATAG+AGG | - | Chr3:66286430-66286449 | MsG0380015178.01.T01:CDS | 35.0% |
!!! | CATTTTTTTCCCTCTCACTT+AGG | - | Chr3:66285401-66285420 | MsG0380015178.01.T01:three_prime_UTR | 35.0% |
!!! | GTATAGTTTGCTCCACATTT+TGG | + | Chr3:66285457-66285476 | None:intergenic | 35.0% |
AAGAGATGGGAAAACAATGG+GGG | - | Chr3:66286981-66287000 | MsG0380015178.01.T01:CDS | 40.0% | |
AAGGGAAGTGGAATCATGAT+GGG | - | Chr3:66287015-66287034 | MsG0380015178.01.T01:CDS | 40.0% | |
AATGGGGGAGATTATGTTGA+AGG | - | Chr3:66286996-66287015 | MsG0380015178.01.T01:CDS | 40.0% | |
AATGGTTGGACATTCACTTG+GGG | - | Chr3:66286541-66286560 | MsG0380015178.01.T01:CDS | 40.0% | |
AGAGGCCTTAAGATTACTCA+TGG | - | Chr3:66286198-66286217 | MsG0380015178.01.T01:CDS | 40.0% | |
AGTTTGTGACCAAGTGAAAC+GGG | + | Chr3:66285557-66285576 | None:intergenic | 40.0% | |
ATGGGGGAGATTATGTTGAA+GGG | - | Chr3:66286997-66287016 | MsG0380015178.01.T01:CDS | 40.0% | |
CCACCAGTTAGTATATTCAC+CGG | + | Chr3:66286730-66286749 | None:intergenic | 40.0% | |
CTTGGTCACAAACTTATGAC+CGG | - | Chr3:66285563-66285582 | MsG0380015178.01.T01:three_prime_UTR | 40.0% | |
GAGATTATGTTGAAGGGAAG+TGG | - | Chr3:66287003-66287022 | MsG0380015178.01.T01:CDS | 40.0% | |
GGTAAGAGATGGGAAAACAA+TGG | - | Chr3:66286978-66286997 | MsG0380015178.01.T01:CDS | 40.0% | |
GGTACAACTTCAGAACCAAA+AGG | - | Chr3:66286409-66286428 | MsG0380015178.01.T01:CDS | 40.0% | |
GTAATGGTTGGACATTCACT+TGG | - | Chr3:66286539-66286558 | MsG0380015178.01.T01:CDS | 40.0% | |
GTTGTAGTTACCTAAGTGAG+AGG | + | Chr3:66285414-66285433 | None:intergenic | 40.0% | |
TACGAGCAAATGGTTCATCA+TGG | - | Chr3:66286319-66286338 | MsG0380015178.01.T01:CDS | 40.0% | |
TCTCCGGTGAATATACTAAC+TGG | - | Chr3:66286724-66286743 | MsG0380015178.01.T01:CDS | 40.0% | |
TCTTGAAACAATGGAGAGTG+TGG | - | Chr3:66286957-66286976 | MsG0380015178.01.T01:CDS | 40.0% | |
TGCAATGCCACATCCAAAAT+GGG | - | Chr3:66287245-66287264 | MsG0380015178.01.T01:intron | 40.0% | |
TGTGACACTAAGGAAGAATG+AGG | - | Chr3:66287287-66287306 | MsG0380015178.01.T01:intron | 40.0% | |
TTGCAATGCCACATCCAAAA+TGG | - | Chr3:66287244-66287263 | MsG0380015178.01.T01:intron | 40.0% | |
TTTGTGAGTGGCAGAAGAAA+TGG | - | Chr3:66286848-66286867 | MsG0380015178.01.T01:CDS | 40.0% | |
! | AGCCAAAGCTAAGTGTTTTG+TGG | - | Chr3:66287461-66287480 | MsG0380015178.01.T01:intron | 40.0% |
! | ATGGACTAACTGAAGCAACA+GGG | - | Chr3:66286815-66286834 | MsG0380015178.01.T01:CDS | 40.0% |
! | CTTAGTGTCACAAAAGCACA+AGG | + | Chr3:66287279-66287298 | None:intergenic | 40.0% |
! | CTTGTGCTTTTGTGACACTA+AGG | - | Chr3:66287277-66287296 | MsG0380015178.01.T01:intron | 40.0% |
! | GATGCATTTTGCAGTACCTA+TGG | - | Chr3:66286057-66286076 | MsG0380015178.01.T01:CDS | 40.0% |
! | TATGGACTAACTGAAGCAAC+AGG | - | Chr3:66286814-66286833 | MsG0380015178.01.T01:CDS | 40.0% |
! | TGGCTCGATTTTCTCAAGTA+GGG | + | Chr3:66286770-66286789 | None:intergenic | 40.0% |
! | TGGTTTAGAACTGGTGATGT+TGG | - | Chr3:66287084-66287103 | MsG0380015178.01.T01:CDS | 40.0% |
!! | ACAGCAGCTTCTAAAACCTT+AGG | + | Chr3:66287222-66287241 | None:intergenic | 40.0% |
!! | AGTTTGCTCCACATTTTGGT+AGG | + | Chr3:66285453-66285472 | None:intergenic | 40.0% |
!! | ATCTGCTTCAGCTTGTTATG+TGG | - | Chr3:66287697-66287716 | MsG0380015178.01.T01:CDS | 40.0% |
!!! | AGCATCGATTGCTCTCTTTT+CGG | + | Chr3:66286883-66286902 | None:intergenic | 40.0% |
!!! | TAAGGTTTTAGAAGCTGCTG+TGG | - | Chr3:66287221-66287240 | MsG0380015178.01.T01:intron | 40.0% |
AGGGAAGTGGAATCATGATG+GGG | - | Chr3:66287016-66287035 | MsG0380015178.01.T01:CDS | 45.0% | |
ATGAAGGAACCCGTTTCACT+TGG | - | Chr3:66285545-66285564 | MsG0380015178.01.T01:three_prime_UTR | 45.0% | |
CCGGTGAATATACTAACTGG+TGG | - | Chr3:66286727-66286746 | MsG0380015178.01.T01:CDS | 45.0% | |
CTTCATGGATGACTGAGGTT+CGG | + | Chr3:66285531-66285550 | None:intergenic | 45.0% | |
CTTGAGAAAATCGAGCCACT+TGG | - | Chr3:66286772-66286791 | MsG0380015178.01.T01:CDS | 45.0% | |
GAAGGGAAGTGGAATCATGA+TGG | - | Chr3:66287014-66287033 | MsG0380015178.01.T01:CDS | 45.0% | |
GACACTAAGGAAGAATGAGG+AGG | - | Chr3:66287290-66287309 | MsG0380015178.01.T01:intron | 45.0% | |
GATGACATAAACACTCCCAC+CGG | - | Chr3:66286274-66286293 | MsG0380015178.01.T01:CDS | 45.0% | |
GCAATGCCACATCCAAAATG+GGG | - | Chr3:66287246-66287265 | MsG0380015178.01.T01:intron | 45.0% | |
TCGAAGAATGGTGGCTATGT+TGG | + | Chr3:66286125-66286144 | None:intergenic | 45.0% | |
! | AAGTGAAACGGGTTCCTTCA+TGG | + | Chr3:66285546-66285565 | None:intergenic | 45.0% |
! | ATGGAGAGTGTGGTAAGAGA+TGG | - | Chr3:66286967-66286986 | MsG0380015178.01.T01:CDS | 45.0% |
! | ATTTTCTCAAGTAGGGACGC+CGG | + | Chr3:66286763-66286782 | None:intergenic | 45.0% |
! | CAAGGACTTTCACCCCATTT+TGG | + | Chr3:66287261-66287280 | None:intergenic | 45.0% |
! | CATTTTGCAGTACCTATGGC+CGG | - | Chr3:66286061-66286080 | MsG0380015178.01.T01:CDS | 45.0% |
! | CTTTCACCCCATTTTGGATG+TGG | + | Chr3:66287255-66287274 | None:intergenic | 45.0% |
! | GTGGCTCGATTTTCTCAAGT+AGG | + | Chr3:66286771-66286790 | None:intergenic | 45.0% |
! | TGCAATATTGAGAGCACGGA+GGG | + | Chr3:66285608-66285627 | None:intergenic | 45.0% |
! | TGGAGAGTGTGGTAAGAGAT+GGG | - | Chr3:66286968-66286987 | MsG0380015178.01.T01:CDS | 45.0% |
! | TTGCAATATTGAGAGCACGG+AGG | + | Chr3:66285609-66285628 | None:intergenic | 45.0% |
CACCATTCTTCGACACTCTG+AGG | - | Chr3:66286132-66286151 | MsG0380015178.01.T01:CDS | 50.0% | |
CACTACCCATTTCCCAACCA+AGG | + | Chr3:66286483-66286502 | None:intergenic | 50.0% | |
CATCAACCACCGTCTCAATG+CGG | - | Chr3:66286099-66286118 | MsG0380015178.01.T01:CDS | 50.0% | |
CGAACCTCAGTCATCCATGA+AGG | - | Chr3:66285529-66285548 | MsG0380015178.01.T01:three_prime_UTR | 50.0% | |
CGAGCTCGAATACGAGCAAA+TGG | - | Chr3:66286309-66286328 | MsG0380015178.01.T01:CDS | 50.0% | |
CGATGCTTAAAGCGCGACAA+GGG | - | Chr3:66286896-66286915 | MsG0380015178.01.T01:CDS | 50.0% | |
CTATGTTGGCCGCATTGAGA+CGG | + | Chr3:66286111-66286130 | None:intergenic | 50.0% | |
GACGAGATAGAGCCATAAGC+TGG | + | Chr3:66287542-66287561 | None:intergenic | 50.0% | |
GATGCTTAAAGCGCGACAAG+GGG | - | Chr3:66286897-66286916 | MsG0380015178.01.T01:CDS | 50.0% | |
GGACTGCTCAACCTACTAAG+TGG | + | Chr3:66287782-66287801 | None:intergenic | 50.0% | |
GGTTCCTTCATGGATGACTG+AGG | + | Chr3:66285536-66285555 | None:intergenic | 50.0% | |
TAAACACTCCCACCGGAATC+CGG | - | Chr3:66286281-66286300 | MsG0380015178.01.T01:CDS | 50.0% | |
TAGATCAGCGACCGCAATCT+AGG | - | Chr3:66285820-66285839 | MsG0380015178.01.T01:CDS | 50.0% | |
TAGATTGCGGTCGCTGATCT+AGG | + | Chr3:66285821-66285840 | None:intergenic | 50.0% | |
TCGATGCTTAAAGCGCGACA+AGG | - | Chr3:66286895-66286914 | MsG0380015178.01.T01:CDS | 50.0% | |
TGCCACTCACAAACAAGTGC+TGG | + | Chr3:66286841-66286860 | None:intergenic | 50.0% | |
! | AATATTGAGAGCACGGAGGG+AGG | + | Chr3:66285605-66285624 | None:intergenic | 50.0% |
! | GATGGTGTTTAGGACAGCAC+CGG | + | Chr3:66286083-66286102 | None:intergenic | 50.0% |
! | TTTTCTCAAGTAGGGACGCC+GGG | + | Chr3:66286762-66286781 | None:intergenic | 50.0% |
!! | CTCAGAGTGTCGAAGAATGG+TGG | + | Chr3:66286134-66286153 | None:intergenic | 50.0% |
!! | GACGGTGGTTGATGGTGTTT+AGG | + | Chr3:66286093-66286112 | None:intergenic | 50.0% |
!! | GGGGATGGTTGGTTTAGAAC+TGG | - | Chr3:66287075-66287094 | MsG0380015178.01.T01:CDS | 50.0% |
AAGCGACGGCGAAAGCTTTC+GGG | - | Chr3:66287055-66287074 | MsG0380015178.01.T01:CDS | 55.0% | |
ACTTGGGGTGTAGCTGCAAG+AGG | - | Chr3:66286556-66286575 | MsG0380015178.01.T01:CDS | 55.0% | |
CGAAAGCTTTCGGGGATGGT+TGG | - | Chr3:66287064-66287083 | MsG0380015178.01.T01:CDS | 55.0% | |
CGCATTGAGACGGTGGTTGA+TGG | + | Chr3:66286101-66286120 | None:intergenic | 55.0% | |
GAAGCGACGGCGAAAGCTTT+CGG | - | Chr3:66287054-66287073 | MsG0380015178.01.T01:CDS | 55.0% | |
GGCCAGCACTTGTTTGTGAG+TGG | - | Chr3:66286836-66286855 | MsG0380015178.01.T01:CDS | 55.0% | |
TTTCTCAAGTAGGGACGCCG+GGG | + | Chr3:66286761-66286780 | None:intergenic | 55.0% | |
!! | CGCCTCAGAGTGTCGAAGAA+TGG | + | Chr3:66286137-66286156 | None:intergenic | 55.0% |
!! | TTTAGGACAGCACCGGCCAT+AGG | + | Chr3:66286076-66286095 | None:intergenic | 55.0% |
ACGGCGAAAGCTTTCGGGGA+TGG | - | Chr3:66287060-66287079 | MsG0380015178.01.T01:CDS | 60.0% | |
AGCGACGGCGAAAGCTTTCG+GGG | - | Chr3:66287056-66287075 | MsG0380015178.01.T01:CDS | 60.0% | |
CGTATTCGAGCTCGCCTAGC+CGG | + | Chr3:66286303-66286322 | None:intergenic | 60.0% | |
TGGGGTGTAGCTGCAAGAGG+AGG | - | Chr3:66286559-66286578 | MsG0380015178.01.T01:CDS | 60.0% | |
TGTTGGCCGCATTGAGACGG+TGG | + | Chr3:66286108-66286127 | None:intergenic | 60.0% | |
TTCTCAAGTAGGGACGCCGG+GGG | + | Chr3:66286760-66286779 | None:intergenic | 60.0% | |
ACTCCCACCGGAATCCGGCT+AGG | - | Chr3:66286286-66286305 | MsG0380015178.01.T01:CDS | 65.0% | |
GAGCTCGCCTAGCCGGATTC+CGG | + | Chr3:66286296-66286315 | None:intergenic | 65.0% | |
TCGCCTAGCCGGATTCCGGT+GGG | + | Chr3:66286292-66286311 | None:intergenic | 65.0% | |
! | AACTGGTGGAGCACCACCCC+CGG | - | Chr3:66286741-66286760 | MsG0380015178.01.T01:CDS | 65.0% |
AGGAAGCGAGGCGGCGACAC+CGG | + | Chr3:66285585-66285604 | None:intergenic | 70.0% | |
CACGGAGGGAGGAAGCGAGG+CGG | + | Chr3:66285594-66285613 | None:intergenic | 70.0% | |
CTCGCCTAGCCGGATTCCGG+TGG | + | Chr3:66286293-66286312 | None:intergenic | 70.0% | |
GAGCACGGAGGGAGGAAGCG+AGG | + | Chr3:66285597-66285616 | None:intergenic | 70.0% | |
TCAAGTAGGGACGCCGGGGG+TGG | + | Chr3:66286757-66286776 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr3 | gene | 66285385 | 66287851 | 66285385 | ID=MsG0380015178.01;Name=MsG0380015178.01 |
Chr3 | mRNA | 66285385 | 66287851 | 66285385 | ID=MsG0380015178.01.T01;Parent=MsG0380015178.01;Name=MsG0380015178.01.T01;_AED=0.13;_eAED=0.13;_QI=57|1|1|1|1|1|2|285|581 |
Chr3 | exon | 66285385 | 66287217 | 66285385 | ID=MsG0380015178.01.T01:exon:22962;Parent=MsG0380015178.01.T01 |
Chr3 | exon | 66287597 | 66287851 | 66287597 | ID=MsG0380015178.01.T01:exon:22961;Parent=MsG0380015178.01.T01 |
Chr3 | five_prime_UTR | 66287795 | 66287851 | 66287795 | ID=MsG0380015178.01.T01:five_prime_utr;Parent=MsG0380015178.01.T01 |
Chr3 | CDS | 66287597 | 66287794 | 66287597 | ID=MsG0380015178.01.T01:cds;Parent=MsG0380015178.01.T01 |
Chr3 | CDS | 66285670 | 66287217 | 66285670 | ID=MsG0380015178.01.T01:cds;Parent=MsG0380015178.01.T01 |
Chr3 | three_prime_UTR | 66285385 | 66285669 | 66285385 | ID=MsG0380015178.01.T01:three_prime_utr;Parent=MsG0380015178.01.T01 |
Gene Sequence |
Protein sequence |