AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380012368.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012368.01.T01 MTR_3g023150 77.607 326 48 6 1 309 212 529 2.20e-169 481
MsG0380012368.01.T01 MTR_7g090740 57.911 316 105 8 1 297 201 507 4.41e-115 342
MsG0380012368.01.T01 MTR_7g090740 61.735 196 53 5 1 182 201 388 7.33e-74 232
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380012368.01.T01 AT3G08550 61.830 317 86 9 1 299 225 524 2.56e-113 338
MsG0380012368.01.T01 AT3G57200 61.728 243 73 4 63 299 279 507 1.15e-93 287
MsG0380012368.01.T01 AT2G41451 56.175 251 85 6 1 234 192 434 8.85e-87 267
MsG0380012368.01.T01 AT3G57200 74.522 157 37 1 63 216 279 435 2.28e-77 243
MsG0380012368.01.T01 AT3G61030 76.562 64 15 0 110 173 293 356 4.75e-29 116
MsG0380012368.01.T01 AT3G60950 76.562 64 15 0 110 173 300 363 1.17e-28 116

Find 145 sgRNAs with CRISPR-Local

Find 467 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAAATCAAGTTTCCAATTA+TGG 0.186339 3:-15546924 None:intergenic
TGCAGTTGCTTGAGATTCTT+TGG 0.192455 3:-15553501 None:intergenic
CATAATTGGAAACTTGATTT+TGG 0.198179 3:+15546925 MsG0380012368.01.T01:five_prime_UTR
CCAAACTATTTCCTGACTTA+TGG 0.199339 3:+15551922 MsG0380012368.01.T01:CDS
AGACCTTTGGATTTAAAGTA+TGG 0.246925 3:-15551002 None:intergenic
GGAGGAGGAGGTGGTGGAGG+TGG 0.248488 3:-15546668 None:intergenic
GGTTGATGGAATGTGTAAAT+TGG 0.253048 3:-15546590 None:intergenic
GGTGAAGGAGGAGGAGGTGG+TGG 0.276637 3:-15546674 None:intergenic
GAATGAGTAGTATGAGTAAT+AGG 0.283066 3:-15546850 None:intergenic
AGAAGTTAAATCTGAGAATT+TGG 0.284393 3:-15552155 None:intergenic
AGCAACTGCAAGGAAGGTTT+TGG 0.300587 3:+15553514 MsG0380012368.01.T01:CDS
CTCCCGAACAATTTGTCCTT+TGG 0.303389 3:-15551070 None:intergenic
AGTTTCCAATTATGGTAATA+AGG 0.304088 3:-15546916 None:intergenic
TGGGTTGACGGAGAGGGGTG+TGG 0.311114 3:-15546648 None:intergenic
GAAGGAGGAGGAGGTGGTGG+AGG 0.314765 3:-15546671 None:intergenic
GAGGGGTGTGGAGGTGGTTG+TGG 0.319444 3:-15546636 None:intergenic
TCCAAGACCTTTGATACTTC+AGG 0.320025 3:-15548499 None:intergenic
ATTGGCATGGTGGTGGTTGA+TGG 0.321529 3:-15546604 None:intergenic
ATCTTCTGTATTTCAAGAAT+TGG 0.324680 3:+15553544 MsG0380012368.01.T01:CDS
TGGTTGTGGTGGTTGGTGAT+TGG 0.326553 3:-15546622 None:intergenic
AGTGAGGAGGAGGAGGATCT+TGG 0.335209 3:-15546698 None:intergenic
TTGTAAAGCATCCCTCAATA+TGG 0.342764 3:+15549548 MsG0380012368.01.T01:exon
TTGGTTGCATCAGCCGTATT+TGG 0.345096 3:+15549473 MsG0380012368.01.T01:intron
GCTATAGTAGCGAGGGAGAC+AGG 0.350210 3:-15546727 None:intergenic
CCATAAGTCAGGAAATAGTT+TGG 0.350514 3:-15551922 None:intergenic
GTGGAGGTGGTTGTGGTGGT+TGG 0.352596 3:-15546629 None:intergenic
GTTCTTCCAACCTTTCTAGA+TGG 0.361668 3:-15553479 None:intergenic
GGTTTCAAGCAGTAGACCTT+TGG 0.376783 3:-15551015 None:intergenic
AGGTGGTGGAGGTGGGTTGA+CGG 0.380436 3:-15546660 None:intergenic
ATACAAAGTTTGAGGGAATC+TGG 0.380986 3:+15553350 MsG0380012368.01.T01:CDS
CAGGGAGGAGAGTGAGGAGG+AGG 0.383225 3:-15546708 None:intergenic
GGAGGTGGGTTGACGGAGAG+GGG 0.383930 3:-15546653 None:intergenic
TTATGCCAGTGAAATCAAAT+TGG 0.387674 3:+15552102 MsG0380012368.01.T01:intron
GTGGAGGTGGGTTGACGGAG+AGG 0.388125 3:-15546655 None:intergenic
CAAGATCACCTTCGGCCTAA+TGG 0.388699 3:+15551970 MsG0380012368.01.T01:CDS
GACGGAGAGGGGTGTGGAGG+TGG 0.390186 3:-15546642 None:intergenic
GTTGGTGATTGGCATGGTGG+TGG 0.392077 3:-15546611 None:intergenic
GTTGATGGAATGTGTAAATT+GGG 0.406797 3:-15546589 None:intergenic
GGAGGTGAAGGAGGAGGAGG+TGG 0.409235 3:-15546677 None:intergenic
TCACCAAAGGACAAATTGTT+CGG 0.409293 3:+15551067 MsG0380012368.01.T01:CDS
TATGGAGATGGCTATTGTTA+TGG 0.420092 3:+15549566 MsG0380012368.01.T01:exon
TCCTGAAGTATCAAAGGTCT+TGG 0.422959 3:+15548498 MsG0380012368.01.T01:five_prime_UTR
CACCAAAGGACAAATTGTTC+GGG 0.424672 3:+15551068 MsG0380012368.01.T01:CDS
GAGGATCTTGGAGGTGAAGG+AGG 0.428081 3:-15546686 None:intergenic
GAGGAGGAGGTGGTGGAGGT+GGG 0.430393 3:-15546667 None:intergenic
ATGCCAAAGTATGTATCCTT+TGG 0.431181 3:-15551874 None:intergenic
GTTGACGGAGAGGGGTGTGG+AGG 0.433734 3:-15546645 None:intergenic
GAGGAGGATCTTGGAGGTGA+AGG 0.434104 3:-15546689 None:intergenic
TACTGCTTGAAACCAGTGAT+TGG 0.437122 3:+15551024 MsG0380012368.01.T01:CDS
TGCCATCTGTGTGCACCATT+AGG 0.440371 3:-15551985 None:intergenic
GGAGGAGAGTGAGGAGGAGG+AGG 0.440947 3:-15546705 None:intergenic
CTATAGCTTTCATCCTTCAA+TGG 0.443049 3:+15546743 MsG0380012368.01.T01:five_prime_UTR
GCTATTTAACTAGGGAGTAA+AGG 0.448035 3:+15548779 MsG0380012368.01.T01:intron
TGGAGGTGGGTTGACGGAGA+GGG 0.449916 3:-15546654 None:intergenic
CTTGGAGGTGAAGGAGGAGG+AGG 0.450565 3:-15546680 None:intergenic
GTGGTGGTTGGTGATTGGCA+TGG 0.451745 3:-15546617 None:intergenic
GGGAGCCATGAGGGGACAAA+AGG 0.453749 3:-15546792 None:intergenic
CTCCCACAATTTCCCTGGCA+TGG 0.455769 3:+15546810 MsG0380012368.01.T01:five_prime_UTR
CTTCCAAAGGATACATACTT+TGG 0.456860 3:+15551871 MsG0380012368.01.T01:CDS
GGGTGTGGAGGTGGTTGTGG+TGG 0.457231 3:-15546633 None:intergenic
GATCTTGGAGGTGAAGGAGG+AGG 0.463458 3:-15546683 None:intergenic
GTGGTTGGTGATTGGCATGG+TGG 0.470538 3:-15546614 None:intergenic
GGACAAAAGGGTCGCTGGAT+CGG 0.476286 3:-15546779 None:intergenic
TTCTTCCAACCTTTCTAGAT+GGG 0.480125 3:-15553478 None:intergenic
GCCATGTCTCATTCCAAATA+CGG 0.480672 3:-15549486 None:intergenic
AGGTCATAATACAAAGTTTG+AGG 0.481090 3:+15553342 MsG0380012368.01.T01:intron
CATGGCTCCCACAATTTCCC+TGG 0.482015 3:+15546805 MsG0380012368.01.T01:five_prime_UTR
GAGGAGGAGGAGGATCTTGG+AGG 0.485415 3:-15546695 None:intergenic
GGTCATAATACAAAGTTTGA+GGG 0.489149 3:+15553343 MsG0380012368.01.T01:intron
TCTTCTGATTGTCTTAACCT+TGG 0.489575 3:+15546871 MsG0380012368.01.T01:five_prime_UTR
AATCCATGCCAGGGAAATTG+TGG 0.489629 3:-15546813 None:intergenic
CAATAGCCATCTCCATATTG+AGG 0.490567 3:-15549560 None:intergenic
GGCTTGAGCAGATTCTTCCC+TGG 0.492916 3:+15548410 MsG0380012368.01.T01:five_prime_UTR
CACGGGTACAAGATCACCTT+CGG 0.495599 3:+15551962 MsG0380012368.01.T01:CDS
TTATGGTAATAAGGAAAAGA+TGG 0.496629 3:-15546907 None:intergenic
AGAGGAGAAGAATCCATGCC+AGG 0.500007 3:-15546823 None:intergenic
TGATACCACCACGCCATTGA+AGG 0.500955 3:-15546756 None:intergenic
TGTACCGCCGCAATCTCCAC+CGG 0.502564 3:+15553568 MsG0380012368.01.T01:CDS
TCTCTCCCATCTAGAAAGGT+TGG 0.506483 3:+15553473 MsG0380012368.01.T01:CDS
TGACAGATCAAAAGAGAAAG+AGG 0.506887 3:-15551812 None:intergenic
GTATGAGTAATAGGTGAAAG+AGG 0.507269 3:-15546841 None:intergenic
GACTTTATGATAAAACATCC+AGG 0.507326 3:-15548428 None:intergenic
ACTGCTTGAAACCAGTGATT+GGG 0.512523 3:+15551025 MsG0380012368.01.T01:CDS
GGCCTAATGGTGCACACAGA+TGG 0.514465 3:+15551983 MsG0380012368.01.T01:CDS
AGACAGGGAGGAGAGTGAGG+AGG 0.522681 3:-15546711 None:intergenic
ATCTCAAGCAACTGCAAGGA+AGG 0.523877 3:+15553508 MsG0380012368.01.T01:CDS
GGAAATTGTGGGAGCCATGA+GGG 0.524279 3:-15546801 None:intergenic
CTATAGTAGCGAGGGAGACA+GGG 0.524295 3:-15546726 None:intergenic
GGGAGACAGGGAGGAGAGTG+AGG 0.526540 3:-15546714 None:intergenic
TCTATCTCTCCCATCTAGAA+AGG 0.528498 3:+15553469 MsG0380012368.01.T01:CDS
TGAGGGGACAAAAGGGTCGC+TGG 0.531479 3:-15546784 None:intergenic
TATTTCCTGACTTATGGAAA+CGG 0.534087 3:+15551928 MsG0380012368.01.T01:CDS
AATAGCCATCTCCATATTGA+GGG 0.540705 3:-15549559 None:intergenic
TATATATAGAACAACACAGC+TGG 0.542270 3:+15548803 MsG0380012368.01.T01:five_prime_UTR
ATCCACTTGAGCCCAATCAC+TGG 0.547543 3:-15551036 None:intergenic
GTATAATGAGCATGTTGTGT+GGG 0.550390 3:+15552947 MsG0380012368.01.T01:CDS
TGCTACTCCTGAAGTATCAA+AGG 0.550887 3:+15548492 MsG0380012368.01.T01:five_prime_UTR
TGGTGACTCACTTACTCCAA+AGG 0.551192 3:+15546945 MsG0380012368.01.T01:five_prime_UTR
AACCAGTGATTGGGCTCAAG+TGG 0.554761 3:+15551034 MsG0380012368.01.T01:CDS
AGGTGAAGATTAAACTGTTG+AGG 0.559338 3:+15552979 MsG0380012368.01.T01:CDS
AAGATTAAACTGTTGAGGAA+AGG 0.559419 3:+15552984 MsG0380012368.01.T01:CDS
ATCCATGCCAGGGAAATTGT+GGG 0.559696 3:-15546812 None:intergenic
GATGAAAGCTATAGTAGCGA+GGG 0.562692 3:-15546734 None:intergenic
GGAGCCATGAGGGGACAAAA+GGG 0.563089 3:-15546791 None:intergenic
CAGTGAAATCAAATTGGAAG+AGG 0.567599 3:+15552108 MsG0380012368.01.T01:intron
TGTTAAAAGATGCTTCATGT+TGG 0.568812 3:+15552216 MsG0380012368.01.T01:CDS
AGTCCATACTTTAAATCCAA+AGG 0.569874 3:+15550999 MsG0380012368.01.T01:CDS
TTAAAGTATGGACTATGCAC+AGG 0.570034 3:-15550990 None:intergenic
TGTTGTGTGGGGTGATAAAG+AGG 0.573372 3:+15552959 MsG0380012368.01.T01:CDS
GAGGAGAAGAATCCATGCCA+GGG 0.574501 3:-15546822 None:intergenic
GTCACAAGTAGTACATCCGC+AGG 0.576975 3:+15548388 MsG0380012368.01.T01:five_prime_UTR
AGATGGCTATTGTTATGGCA+AGG 0.579026 3:+15549571 MsG0380012368.01.T01:CDS
GCTTTCATCCTTCAATGGCG+TGG 0.589303 3:+15546748 MsG0380012368.01.T01:five_prime_UTR
AGCATCCCTCAATATGGAGA+TGG 0.589547 3:+15549554 MsG0380012368.01.T01:exon
GAAACGGAAAATCAGTTGCA+CGG 0.590916 3:+15551944 MsG0380012368.01.T01:CDS
ACTTCTAGACGTGATCGTTG+TGG 0.592046 3:+15552172 MsG0380012368.01.T01:CDS
GACAGATCAAAAGAGAAAGA+GGG 0.592652 3:-15551811 None:intergenic
GAAATTGTGGGAGCCATGAG+GGG 0.593463 3:-15546800 None:intergenic
GTACCGCCGCAATCTCCACC+GGG 0.594342 3:+15553569 MsG0380012368.01.T01:CDS
GGGAAATTGTGGGAGCCATG+AGG 0.599085 3:-15546802 None:intergenic
AAACGGAAAATCAGTTGCAC+GGG 0.602924 3:+15551945 MsG0380012368.01.T01:CDS
GATGGCTATTGTTATGGCAA+GGG 0.603982 3:+15549572 MsG0380012368.01.T01:CDS
AAGAATCTCAAGCAACTGCA+AGG 0.610567 3:+15553504 MsG0380012368.01.T01:CDS
TGGAAGAACAACAAGCTAAG+AGG 0.617904 3:+15548823 MsG0380012368.01.T01:five_prime_UTR
GTCAGTGTCATTGTCATGTG+TGG 0.622125 3:-15552528 None:intergenic
TTCATCCTTCAATGGCGTGG+TGG 0.623517 3:+15546751 MsG0380012368.01.T01:five_prime_UTR
ACTACTCCCGGTGGAGATTG+CGG 0.623597 3:-15553575 None:intergenic
GGATGAAAGCTATAGTAGCG+AGG 0.632882 3:-15546735 None:intergenic
TGTGTGCACCATTAGGCCGA+AGG 0.634277 3:-15551978 None:intergenic
GACTCGCATATACACTCCCA+TGG 0.640295 3:+15553013 MsG0380012368.01.T01:CDS
TGGATAATGAGCTTCACCAA+AGG 0.643007 3:+15551054 MsG0380012368.01.T01:CDS
GGTATAATGAGCATGTTGTG+TGG 0.645998 3:+15552946 MsG0380012368.01.T01:intron
GCCGTATTTGGAATGAGACA+TGG 0.646826 3:+15549485 MsG0380012368.01.T01:intron
TATTTGGAATGAGACATGGC+TGG 0.651580 3:+15549489 MsG0380012368.01.T01:five_prime_UTR
TAGTAGCGAGGGAGACAGGG+AGG 0.653685 3:-15546723 None:intergenic
ATGTACAAAGATTCTGTGCG+CGG 0.654406 3:+15551895 MsG0380012368.01.T01:CDS
GAATTATGATCATCTTCCAA+AGG 0.659643 3:+15551858 MsG0380012368.01.T01:CDS
ACTTTATGATAAAACATCCA+GGG 0.660075 3:-15548427 None:intergenic
TGACACTGACACGTAGACAC+CGG 0.665146 3:+15552541 MsG0380012368.01.T01:CDS
CTGATCATGAATGTGAAACG+AGG 0.672052 3:-15553610 None:intergenic
ATGGAGTAGAAGAACGACCA+AGG 0.674136 3:-15546888 None:intergenic
AAGAATCTGCTCAAGCCCTG+CGG 0.700662 3:-15548404 None:intergenic
TCACAAGTAGTACATCCGCA+GGG 0.702932 3:+15548389 MsG0380012368.01.T01:five_prime_UTR
TATAATGAGCATGTTGTGTG+GGG 0.716008 3:+15552948 MsG0380012368.01.T01:CDS
ACTCCCGGTGGAGATTGCGG+CGG 0.770451 3:-15553572 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTAGAATAATATCATTA+GGG - Chr3:15548752-15548771 None:intergenic 10.0%
!! TAAAAAAAAAAAAACTGTAA+TGG + Chr3:15551677-15551696 MsG0380012368.01.T01:intron 10.0%
!!! AGACTTTTTTTTTTTTTTTT+TGG - Chr3:15551203-15551222 None:intergenic 10.0%
!!! ATAAAATTTTCTATAAAGTT+AGG - Chr3:15547782-15547801 None:intergenic 10.0%
!!! TAATAAAACACATTTTTTTT+AGG + Chr3:15553823-15553842 MsG0380012368.01.T01:three_prime_UTR 10.0%
!!! TGTATTATTATTTTACTATA+AGG + Chr3:15552350-15552369 MsG0380012368.01.T01:intron 10.0%
!!! TTATTACTAGTAAATTATTT+TGG + Chr3:15547845-15547864 MsG0380012368.01.T01:intron 10.0%
!!! TTTTTATCTTTAATTTGATT+TGG + Chr3:15550178-15550197 MsG0380012368.01.T01:intron 10.0%
!! AAATGTAAATGAATGAAAAT+AGG - Chr3:15551591-15551610 None:intergenic 15.0%
!! ATAAGTAATATATGTAGAAA+TGG - Chr3:15553280-15553299 None:intergenic 15.0%
!! ATTATATTTAGTATATGAGA+TGG + Chr3:15547219-15547238 MsG0380012368.01.T01:intron 15.0%
!! CAAATTAGAATAATATCATT+AGG - Chr3:15548753-15548772 None:intergenic 15.0%
!! CTAATGATATTATTCTAATT+TGG + Chr3:15548751-15548770 MsG0380012368.01.T01:intron 15.0%
!! TTAAAATTTAATTGTGTTAG+TGG + Chr3:15547191-15547210 MsG0380012368.01.T01:intron 15.0%
!! TTATATTTAGTATATGAGAT+GGG + Chr3:15547220-15547239 MsG0380012368.01.T01:intron 15.0%
!! TTTAACGAAAAATTCATTAA+AGG - Chr3:15550204-15550223 None:intergenic 15.0%
!!! AAAGTTGAATTTTTAGATTA+AGG + Chr3:15550959-15550978 MsG0380012368.01.T01:intron 15.0%
!!! ATTATAGGGATTTTAATTTT+GGG + Chr3:15547526-15547545 MsG0380012368.01.T01:intron 15.0%
!!! ATTATTTTACTATAAGGTTT+AGG + Chr3:15552356-15552375 MsG0380012368.01.T01:intron 15.0%
!!! ATTTTTGCTTATAATTAAGT+CGG + Chr3:15550645-15550664 MsG0380012368.01.T01:intron 15.0%
!!! GGAAAAGAAATAAAATTTTA+TGG - Chr3:15549314-15549333 None:intergenic 15.0%
!!! TTTGAATTATTTTGAATTGT+GGG + Chr3:15546987-15547006 MsG0380012368.01.T01:intron 15.0%
!! AATTGCAAAATCAATTCAAA+AGG - Chr3:15548884-15548903 None:intergenic 20.0%
!! ACTTTCTTTAATCAAAAGAA+TGG - Chr3:15550944-15550963 None:intergenic 20.0%
!! ATATAAGATTTAGTACTAGA+TGG + Chr3:15547800-15547819 MsG0380012368.01.T01:intron 20.0%
!! ATCAATGCTTAATCAAAATA+AGG + Chr3:15549162-15549181 MsG0380012368.01.T01:intron 20.0%
!! ATTAATATTATCATCACACT+TGG - Chr3:15550158-15550177 None:intergenic 20.0%
!! ATTAATGTAATCACATTTGT+TGG + Chr3:15552585-15552604 MsG0380012368.01.T01:intron 20.0%
!! ATTCAAATGAAAAACTGAAT+TGG - Chr3:15552300-15552319 None:intergenic 20.0%
!! CTTTCTTTAATCAAAAGAAT+GGG - Chr3:15550943-15550962 None:intergenic 20.0%
!! GATGAGATTCAATAATAAAA+TGG - Chr3:15548862-15548881 None:intergenic 20.0%
!! GTTATACTTATTATATGACA+TGG + Chr3:15549342-15549361 MsG0380012368.01.T01:intron 20.0%
!! TATAAGATTTAGTACTAGAT+GGG + Chr3:15547801-15547820 MsG0380012368.01.T01:intron 20.0%
!! TTAAAGCATAAGTTTATTGA+CGG + Chr3:15550219-15550238 MsG0380012368.01.T01:intron 20.0%
!! TTAAGTCTCTAATATCTATA+TGG + Chr3:15550247-15550266 MsG0380012368.01.T01:intron 20.0%
!! TTTCTTTAATCAAAAGAATG+GGG - Chr3:15550942-15550961 None:intergenic 20.0%
!!! AAAAAAAACTGTAATGGAAT+TGG + Chr3:15551683-15551702 MsG0380012368.01.T01:intron 20.0%
!!! ACATTTTTTTTAGGCATAAA+AGG + Chr3:15553832-15553851 MsG0380012368.01.T01:three_prime_UTR 20.0%
!!! ATGTTTTATCATAAAGTCAT+TGG + Chr3:15548433-15548452 MsG0380012368.01.T01:five_prime_UTR 20.0%
!!! ATTAAGCATTGATAGTAATA+AGG - Chr3:15549155-15549174 None:intergenic 20.0%
!!! ATTGATGATGTATTATACTT+TGG - Chr3:15552027-15552046 None:intergenic 20.0%
!!! ATTGTAACTTTTAAGCAAAA+GGG + Chr3:15547038-15547057 MsG0380012368.01.T01:intron 20.0%
!!! CATTATAGGGATTTTAATTT+TGG + Chr3:15547525-15547544 MsG0380012368.01.T01:intron 20.0%
!!! CTTCTGTTTTAAATTATTAC+CGG - Chr3:15552563-15552582 None:intergenic 20.0%
!!! CTTTGAATTATTTTGAATTG+TGG + Chr3:15546986-15547005 MsG0380012368.01.T01:intron 20.0%
!!! TTGAATTATTTTGAATTGTG+GGG + Chr3:15546988-15547007 MsG0380012368.01.T01:intron 20.0%
!!! TTGATGATGTATTATACTTT+GGG - Chr3:15552026-15552045 None:intergenic 20.0%
!!! TTGATTTTGCAATTTTCAAT+TGG + Chr3:15548890-15548909 MsG0380012368.01.T01:intron 20.0%
! AAAAAAAGTCTACTACTTGA+TGG + Chr3:15551212-15551231 MsG0380012368.01.T01:intron 25.0%
! AAAAAAGTCTACTACTTGAT+GGG + Chr3:15551213-15551232 MsG0380012368.01.T01:intron 25.0%
! AAACAATCAAAGTATAAGAG+TGG - Chr3:15551502-15551521 None:intergenic 25.0%
! AACATGAAGTAAAAAAGAAC+TGG + Chr3:15550059-15550078 MsG0380012368.01.T01:intron 25.0%
! AAGATTATATCAATAGGTGT+AGG - Chr3:15551280-15551299 None:intergenic 25.0%
! AAGCATGTCTAAATTCAAAT+TGG - Chr3:15548938-15548957 None:intergenic 25.0%
! AAGTAGACTTTATCAATTTC+AGG + Chr3:15552773-15552792 MsG0380012368.01.T01:intron 25.0%
! AATAACTTATCACTTACCAT+GGG - Chr3:15553032-15553051 None:intergenic 25.0%
! ACAAAAAGTTCATAATTGCA+TGG - Chr3:15549532-15549551 None:intergenic 25.0%
! ACACCTATTGATATAATCTT+TGG + Chr3:15551280-15551299 MsG0380012368.01.T01:intron 25.0%
! ACTTTATGATAAAACATCCA+GGG - Chr3:15548430-15548449 None:intergenic 25.0%
! AGAAGTTAAATCTGAGAATT+TGG - Chr3:15552158-15552177 None:intergenic 25.0%
! AGCATGTCTAAATTCAAATT+GGG - Chr3:15548937-15548956 None:intergenic 25.0%
! AGTTTCCAATTATGGTAATA+AGG - Chr3:15546919-15546938 None:intergenic 25.0%
! ATAATGGTAAGAAATTGAAG+AGG - Chr3:15552882-15552901 None:intergenic 25.0%
! ATACTGATCATATAAGTTGT+TGG + Chr3:15549454-15549473 MsG0380012368.01.T01:intron 25.0%
! ATCCCAAAGATTATATCAAT+AGG - Chr3:15551286-15551305 None:intergenic 25.0%
! ATCTACAAAAAAATGAAACG+CGG - Chr3:15548283-15548302 None:intergenic 25.0%
! ATCTTCTGTATTTCAAGAAT+TGG + Chr3:15553544-15553563 MsG0380012368.01.T01:CDS 25.0%
! ATGGTAAGTGATAAGTTATT+AGG + Chr3:15553032-15553051 MsG0380012368.01.T01:intron 25.0%
! ATTGTAACTTTGATCAAAAG+AGG + Chr3:15547496-15547515 MsG0380012368.01.T01:intron 25.0%
! CAAAATCAAGTTTCCAATTA+TGG - Chr3:15546927-15546946 None:intergenic 25.0%
! CACCTATTGATATAATCTTT+GGG + Chr3:15551281-15551300 MsG0380012368.01.T01:intron 25.0%
! CAGGAAGATTAATAACATAA+TGG - Chr3:15552898-15552917 None:intergenic 25.0%
! GCTAAAAAAAAACAAACCTT+TGG - Chr3:15546964-15546983 None:intergenic 25.0%
! GTTAAGTGCAATTAATTTCT+TGG - Chr3:15550598-15550617 None:intergenic 25.0%
! GTTCTATTCATCTTAGTATT+AGG + Chr3:15548685-15548704 MsG0380012368.01.T01:intron 25.0%
! TAATAACTTATCACTTACCA+TGG - Chr3:15553033-15553052 None:intergenic 25.0%
! TAATAAGTATAACACTGACA+AGG - Chr3:15549335-15549354 None:intergenic 25.0%
! TAGTATATGAGGATAATGAA+GGG + Chr3:15547660-15547679 MsG0380012368.01.T01:intron 25.0%
! TCTGGATAACTTATTCATAA+AGG - Chr3:15550904-15550923 None:intergenic 25.0%
! TGCTTTACGGTAAATAAAAT+TGG - Chr3:15550708-15550727 None:intergenic 25.0%
! TGGTAAGTGATAAGTTATTA+GGG + Chr3:15553033-15553052 MsG0380012368.01.T01:intron 25.0%
! TGGTATATCTGTTATAACAT+TGG - Chr3:15550808-15550827 None:intergenic 25.0%
! TTAGTATATGAGGATAATGA+AGG + Chr3:15547659-15547678 MsG0380012368.01.T01:intron 25.0%
! TTATGGTAATAAGGAAAAGA+TGG - Chr3:15546910-15546929 None:intergenic 25.0%
! TTGAATTGCATATCAGAAAA+CGG + Chr3:15552314-15552333 MsG0380012368.01.T01:intron 25.0%
! TTTAGTTGAAAACGAGTTTA+AGG + Chr3:15548598-15548617 MsG0380012368.01.T01:intron 25.0%
!! ATAAATGATGATGCATTACT+AGG + Chr3:15550529-15550548 MsG0380012368.01.T01:intron 25.0%
!! CATAATTGGAAACTTGATTT+TGG + Chr3:15546925-15546944 MsG0380012368.01.T01:five_prime_UTR 25.0%
!! CTAAATTGTGTTATTAGTAC+TGG + Chr3:15548102-15548121 MsG0380012368.01.T01:intron 25.0%
!! CTTATTTGTGTATTGTGTTT+TGG + Chr3:15551719-15551738 MsG0380012368.01.T01:intron 25.0%
!! CTTTTAACATCTTCTTTTGT+AGG - Chr3:15552205-15552224 None:intergenic 25.0%
!! CTTTTCCTTATTACCATAAT+TGG + Chr3:15546911-15546930 MsG0380012368.01.T01:five_prime_UTR 25.0%
!! GATTGTAACTTTTAAGCAAA+AGG + Chr3:15547037-15547056 MsG0380012368.01.T01:intron 25.0%
!! TGATGATGTATTATACTTTG+GGG - Chr3:15552025-15552044 None:intergenic 25.0%
!! TGGTTTATGCTATTTAACTA+GGG + Chr3:15548771-15548790 MsG0380012368.01.T01:intron 25.0%
!! TGGTTTTCATTTATAAGTCA+TGG + Chr3:15549863-15549882 MsG0380012368.01.T01:intron 25.0%
!! TTATTGTTTTCTGCGTAATT+TGG + Chr3:15549639-15549658 MsG0380012368.01.T01:intron 25.0%
!! TTGGTTTATGCTATTTAACT+AGG + Chr3:15548770-15548789 MsG0380012368.01.T01:intron 25.0%
!! TTTGTGTTTTGTATCATTCT+GGG + Chr3:15547091-15547110 MsG0380012368.01.T01:intron 25.0%
!! TTTGTTTAAGATTTAGTCCT+GGG + Chr3:15548056-15548075 MsG0380012368.01.T01:intron 25.0%
!! TTTTCTTTTCTTTTCTCCTA+TGG - Chr3:15549021-15549040 None:intergenic 25.0%
!! TTTTGTGTTTTGTATCATTC+TGG + Chr3:15547090-15547109 MsG0380012368.01.T01:intron 25.0%
!!! AACAAACTTTTTTCTCTTTG+TGG + Chr3:15548459-15548478 MsG0380012368.01.T01:five_prime_UTR 25.0%
!!! AACTTTTCTTTAGAAAGTGA+TGG - Chr3:15553404-15553423 None:intergenic 25.0%
!!! ACTTTTCTTTAGAAAGTGAT+GGG - Chr3:15553403-15553422 None:intergenic 25.0%
!!! ATTTATGTTTTGATACGTTG+AGG + Chr3:15548635-15548654 MsG0380012368.01.T01:intron 25.0%
!!! TTGTTCGTTTTAAGGTATTT+TGG + Chr3:15547713-15547732 MsG0380012368.01.T01:intron 25.0%
!!! TTTTGTTGAAGATTGTTTCT+AGG + Chr3:15548205-15548224 MsG0380012368.01.T01:intron 25.0%
!!! TTTTGTTTAAGATTTAGTCC+TGG + Chr3:15548055-15548074 MsG0380012368.01.T01:intron 25.0%
AAAATAGAGAAAGGATAGCT+TGG - Chr3:15552462-15552481 None:intergenic 30.0%
AAATTCAAATTGGGAAACTC+TGG - Chr3:15548928-15548947 None:intergenic 30.0%
AAGATTAAACTGTTGAGGAA+AGG + Chr3:15552984-15553003 MsG0380012368.01.T01:CDS 30.0%
AAGCAAATATCACATGTTTC+AGG - Chr3:15552917-15552936 None:intergenic 30.0%
AAGTTGTGACTTCTACTTAA+TGG - Chr3:15549230-15549249 None:intergenic 30.0%
AATAAAAGAAGACAGATGCA+AGG + Chr3:15550496-15550515 MsG0380012368.01.T01:intron 30.0%
AGAAGAAGAAGAAGAAGAAA+AGG - Chr3:15553647-15553666 None:intergenic 30.0%
AGAAGAAGAAGAATGAATCA+TGG - Chr3:15546509-15546528 None:intergenic 30.0%
AGGTCATAATACAAAGTTTG+AGG + Chr3:15553342-15553361 MsG0380012368.01.T01:intron 30.0%
AGTCCATACTTTAAATCCAA+AGG + Chr3:15550999-15551018 MsG0380012368.01.T01:CDS 30.0%
AGTTTACAAATTAGCGACTT+TGG - Chr3:15553075-15553094 None:intergenic 30.0%
ATACCTACTCTCACTTATTA+AGG - Chr3:15550627-15550646 None:intergenic 30.0%
ATCAAGCATTATCCATTAAG+TGG - Chr3:15547464-15547483 None:intergenic 30.0%
GAATGAGTAGTATGAGTAAT+AGG - Chr3:15546853-15546872 None:intergenic 30.0%
GAATTATGATCATCTTCCAA+AGG + Chr3:15551858-15551877 MsG0380012368.01.T01:CDS 30.0%
GACTTTATGATAAAACATCC+AGG - Chr3:15548431-15548450 None:intergenic 30.0%
GATAACACTGTTAGTAAACA+TGG + Chr3:15548992-15549011 MsG0380012368.01.T01:intron 30.0%
GATCTGTAGATTATGTAGTA+AGG + Chr3:15547271-15547290 MsG0380012368.01.T01:intron 30.0%
GATTGTTTACCAGAATGAAA+GGG + Chr3:15551514-15551533 MsG0380012368.01.T01:intron 30.0%
GGAAGAGATCATAAATGAAT+AGG - Chr3:15552861-15552880 None:intergenic 30.0%
GGTCATAATACAAAGTTTGA+GGG + Chr3:15553343-15553362 MsG0380012368.01.T01:intron 30.0%
TAAGTAGAAGTCACAACTTA+AGG + Chr3:15549231-15549250 MsG0380012368.01.T01:intron 30.0%
TACAGATGAATTAATACACC+CGG + Chr3:15549730-15549749 MsG0380012368.01.T01:intron 30.0%
TAGAAAACTAACTGCTAACT+AGG + Chr3:15549126-15549145 MsG0380012368.01.T01:intron 30.0%
TAGAATTAGTTACAGAAGTG+AGG - Chr3:15549918-15549937 None:intergenic 30.0%
TAGACATGCTTTCATGATAA+TGG + Chr3:15548947-15548966 MsG0380012368.01.T01:intron 30.0%
TAGAGTAGTCAAATTACTAG+AGG + Chr3:15547314-15547333 MsG0380012368.01.T01:intron 30.0%
TATATATAGAACAACACAGC+TGG + Chr3:15548803-15548822 MsG0380012368.01.T01:five_prime_UTR 30.0%
TATCAAAGAACCATTTAGTG+AGG + Chr3:15549980-15549999 MsG0380012368.01.T01:intron 30.0%
TATTACTGCTCATAATGGTA+TGG + Chr3:15553135-15553154 MsG0380012368.01.T01:intron 30.0%
TATTTCCTGACTTATGGAAA+CGG + Chr3:15551928-15551947 MsG0380012368.01.T01:CDS 30.0%
TCAAGCATTATCCATTAAGT+GGG - Chr3:15547463-15547482 None:intergenic 30.0%
TCATTTATAAGTCATGGAAC+TGG + Chr3:15549869-15549888 MsG0380012368.01.T01:intron 30.0%
TCTACAAAAAAATGAAACGC+GGG - Chr3:15548282-15548301 None:intergenic 30.0%
TCTTCTTCTTCTTCTTTCAT+AGG + Chr3:15553652-15553671 MsG0380012368.01.T01:three_prime_UTR 30.0%
TGATTGTTTACCAGAATGAA+AGG + Chr3:15551513-15551532 MsG0380012368.01.T01:intron 30.0%
TGTCTAAATAAGTGTTTCGT+AGG - Chr3:15552508-15552527 None:intergenic 30.0%
TGTTAAAAGATGCTTCATGT+TGG + Chr3:15552216-15552235 MsG0380012368.01.T01:CDS 30.0%
TTATGCCAGTGAAATCAAAT+TGG + Chr3:15552102-15552121 MsG0380012368.01.T01:intron 30.0%
TTGCTTATAATTAAGTCGGA+TGG + Chr3:15550649-15550668 MsG0380012368.01.T01:intron 30.0%
TTGTATGACTTTGTAAGCAT+TGG + Chr3:15551361-15551380 MsG0380012368.01.T01:intron 30.0%
TTTACTAACAGTGTTATCGT+GGG - Chr3:15548990-15549009 None:intergenic 30.0%
TTTAGATTTATCACGCAAAC+TGG + Chr3:15550317-15550336 MsG0380012368.01.T01:intron 30.0%
! AAAACCTAATGCTCTTTTCA+TGG - Chr3:15551343-15551362 None:intergenic 30.0%
! AGACCTTTGGATTTAAAGTA+TGG - Chr3:15551005-15551024 None:intergenic 30.0%
! AGAGTAGTGTTGTTAAATAG+AGG + Chr3:15553225-15553244 MsG0380012368.01.T01:intron 30.0%
! AGCATTGTAGTTTTTGTAAG+GGG - Chr3:15549263-15549282 None:intergenic 30.0%
! CTATCAGTCTTTCTTTTTCT+AGG + Chr3:15549935-15549954 MsG0380012368.01.T01:intron 30.0%
! GGTATATGATAGAGCATTAT+GGG + Chr3:15547407-15547426 MsG0380012368.01.T01:intron 30.0%
! GTTGATGGAATGTGTAAATT+GGG - Chr3:15546592-15546611 None:intergenic 30.0%
! GTTTTCTATATGTAGGATGT+AGG - Chr3:15549114-15549133 None:intergenic 30.0%
! TAACTTTTAAGCAAAAGGGT+TGG + Chr3:15547042-15547061 MsG0380012368.01.T01:intron 30.0%
! TATCAATGGTCTTTGTTTCT+TGG + Chr3:15551411-15551430 MsG0380012368.01.T01:intron 30.0%
! TGATATTTGCTTCTTGTTGT+AGG + Chr3:15552925-15552944 MsG0380012368.01.T01:intron 30.0%
! TGGTATATGATAGAGCATTA+TGG + Chr3:15547406-15547425 MsG0380012368.01.T01:intron 30.0%
! TTACTATTTTCTACTACTCC+CGG - Chr3:15553590-15553609 None:intergenic 30.0%
! TTAGTATATGAGATGGGTTT+AGG + Chr3:15547226-15547245 MsG0380012368.01.T01:intron 30.0%
! TTGTTGCTGATTAGTATATG+AGG + Chr3:15547649-15547668 MsG0380012368.01.T01:intron 30.0%
! TTTTATGATCTGTGTGAACT+TGG + Chr3:15547114-15547133 MsG0380012368.01.T01:intron 30.0%
! TTTTGTTAGTGAGGTTTATG+AGG + Chr3:15547926-15547945 MsG0380012368.01.T01:intron 30.0%
!! ACGTGATCTGTGTTTTTAAA+TGG + Chr3:15547611-15547630 MsG0380012368.01.T01:intron 30.0%
!! CGTGATCTGTGTTTTTAAAT+GGG + Chr3:15547612-15547631 MsG0380012368.01.T01:intron 30.0%
!! CTTTTCTTTAGAAAGTGATG+GGG - Chr3:15553402-15553421 None:intergenic 30.0%
!! GAGCATTGTAGTTTTTGTAA+GGG - Chr3:15549264-15549283 None:intergenic 30.0%
!! GGTTGATATTTTGTCTTTGT+TGG - Chr3:15549209-15549228 None:intergenic 30.0%
!! GGTTTAAGCTATTTTATGCA+CGG + Chr3:15548246-15548265 MsG0380012368.01.T01:intron 30.0%
!! GTCAATTTTAATAGTTCTGC+TGG + Chr3:15547143-15547162 MsG0380012368.01.T01:intron 30.0%
!! TGAGCATTGTAGTTTTTGTA+AGG - Chr3:15549265-15549284 None:intergenic 30.0%
!!! AAACTTTTTTCTCTTTGTGG+AGG + Chr3:15548462-15548481 MsG0380012368.01.T01:five_prime_UTR 30.0%
!!! AACTTTTTTCTCTTTGTGGA+GGG + Chr3:15548463-15548482 MsG0380012368.01.T01:five_prime_UTR 30.0%
!!! AGGAGTTTTTTAGTGTTCTT+AGG + Chr3:15548225-15548244 MsG0380012368.01.T01:intron 30.0%
!!! GCAGTTAGTTTTCTATATGT+AGG - Chr3:15549121-15549140 None:intergenic 30.0%
!!! TATTGTGTTTTGGCTGAATT+GGG + Chr3:15551729-15551748 MsG0380012368.01.T01:intron 30.0%
AAAAAATGAAACGCGGGAAA+CGG - Chr3:15548276-15548295 None:intergenic 35.0%
AAAAGAGGTGGCTTCATTAT+AGG + Chr3:15547511-15547530 MsG0380012368.01.T01:intron 35.0%
AAAGAGGTGGCTTCATTATA+GGG + Chr3:15547512-15547531 MsG0380012368.01.T01:intron 35.0%
AAAGGATAGCTTGGTATATG+AGG - Chr3:15552453-15552472 None:intergenic 35.0%
AACACATCAAACACAGATCA+TGG - Chr3:15548160-15548179 None:intergenic 35.0%
AACTATCCCAAAAACTTCAG+CGG - Chr3:15550859-15550878 None:intergenic 35.0%
AATAGCCATCTCCATATTGA+GGG - Chr3:15549562-15549581 None:intergenic 35.0%
AATCCAACTCGTAGAAACTA+AGG - Chr3:15549430-15549449 None:intergenic 35.0%
ACAAAAGTTGTCCTTACGTT+CGG + Chr3:15549086-15549105 MsG0380012368.01.T01:intron 35.0%
ACAAATACTCCATGTCATGT+AGG + Chr3:15550564-15550583 MsG0380012368.01.T01:intron 35.0%
ACTGAAGAAGAATGTTGAAG+TGG + Chr3:15552819-15552838 MsG0380012368.01.T01:intron 35.0%
AGAACTAGAGATTAATGTGC+TGG + Chr3:15547374-15547393 MsG0380012368.01.T01:intron 35.0%
AGAAGAAGAAGAAGAAAAGG+TGG - Chr3:15553644-15553663 None:intergenic 35.0%
AGGTGAAGATTAAACTGTTG+AGG + Chr3:15552979-15552998 MsG0380012368.01.T01:CDS 35.0%
AGTCAAAACCGATGTTATGA+TGG + Chr3:15551467-15551486 MsG0380012368.01.T01:intron 35.0%
ATACAAAGTTTGAGGGAATC+TGG + Chr3:15553350-15553369 MsG0380012368.01.T01:CDS 35.0%
ATAGTGCCCAATCAAATCAA+AGG - Chr3:15551653-15551672 None:intergenic 35.0%
ATCACAACATCTCACTTTCA+TGG - Chr3:15550372-15550391 None:intergenic 35.0%
ATCACACTTGGTAGAAGAAA+AGG - Chr3:15550146-15550165 None:intergenic 35.0%
ATCATTAGGGAAGAGAAACA+AGG - Chr3:15548739-15548758 None:intergenic 35.0%
ATGAAAGTGAGATGTTGTGA+TGG + Chr3:15550371-15550390 MsG0380012368.01.T01:intron 35.0%
ATGAATGCCTAGAATCGAAA+AGG - Chr3:15552734-15552753 None:intergenic 35.0%
ATGACCATATCAACATTTCC+TGG - Chr3:15549799-15549818 None:intergenic 35.0%
ATGCCAAAGTATGTATCCTT+TGG - Chr3:15551877-15551896 None:intergenic 35.0%
ATGTGATCTGCGTTTATGAA+TGG + Chr3:15547889-15547908 MsG0380012368.01.T01:intron 35.0%
ATGTTGTAACATCAGGATTC+TGG + Chr3:15549683-15549702 MsG0380012368.01.T01:intron 35.0%
ATTCATAAACGCAGATCACA+TGG - Chr3:15547890-15547909 None:intergenic 35.0%
ATTCCTTAGTTTCTACGAGT+TGG + Chr3:15549424-15549443 MsG0380012368.01.T01:intron 35.0%
ATTCTGCATGTTGTAACATC+AGG + Chr3:15549676-15549695 MsG0380012368.01.T01:intron 35.0%
ATTTACCGTAAAGCAAGTAC+TGG + Chr3:15550713-15550732 MsG0380012368.01.T01:intron 35.0%
CAAATCCAGTACTTGCTTTA+CGG - Chr3:15550721-15550740 None:intergenic 35.0%
CAAGATATTAACACCCTTCA+TGG + Chr3:15553164-15553183 MsG0380012368.01.T01:intron 35.0%
CAAGCATTATCCATTAAGTG+GGG - Chr3:15547462-15547481 None:intergenic 35.0%
CAGTGAAATCAAATTGGAAG+AGG + Chr3:15552108-15552127 MsG0380012368.01.T01:intron 35.0%
CATACATTTATCCTGAAGAC+AGG - Chr3:15549385-15549404 None:intergenic 35.0%
CCAAACTATTTCCTGACTTA+TGG + Chr3:15551922-15551941 MsG0380012368.01.T01:CDS 35.0%
CCATAAGTCAGGAAATAGTT+TGG - Chr3:15551925-15551944 None:intergenic 35.0%
CTACTCTCACTTATTAAGGA+AGG - Chr3:15550623-15550642 None:intergenic 35.0%
CTATAGCTTTCATCCTTCAA+TGG + Chr3:15546743-15546762 MsG0380012368.01.T01:five_prime_UTR 35.0%
CTCTCTATTACTGCTCATAA+TGG + Chr3:15553130-15553149 MsG0380012368.01.T01:intron 35.0%
CTGAAGTTTCAGTGTTACAT+AGG + Chr3:15552642-15552661 MsG0380012368.01.T01:intron 35.0%
CTGCTCATCAAGAAGAAATA+TGG - Chr3:15548362-15548381 None:intergenic 35.0%
CTTCCAAAGGATACATACTT+TGG + Chr3:15551871-15551890 MsG0380012368.01.T01:CDS 35.0%
CTTCCTTAATAAGTGAGAGT+AGG + Chr3:15550621-15550640 MsG0380012368.01.T01:intron 35.0%
GAAAAACTGAATTGGAGAGA+AGG - Chr3:15552292-15552311 None:intergenic 35.0%
GACAGATCAAAAGAGAAAGA+GGG - Chr3:15551814-15551833 None:intergenic 35.0%
GCTATTTAACTAGGGAGTAA+AGG + Chr3:15548779-15548798 MsG0380012368.01.T01:intron 35.0%
GTAACTTTGATCAAAAGAGG+TGG + Chr3:15547499-15547518 MsG0380012368.01.T01:intron 35.0%
GTATAATGAGCATGTTGTGT+GGG + Chr3:15552947-15552966 MsG0380012368.01.T01:CDS 35.0%
GTATGAGTAATAGGTGAAAG+AGG - Chr3:15546844-15546863 None:intergenic 35.0%
GTTTACTAACAGTGTTATCG+TGG - Chr3:15548991-15549010 None:intergenic 35.0%
TAATCCAGAAATCAGTCATG+AGG - Chr3:15551145-15551164 None:intergenic 35.0%
TAATGTGCTGGATGGAAATA+TGG + Chr3:15547386-15547405 MsG0380012368.01.T01:intron 35.0%
TATAATGAGCATGTTGTGTG+GGG + Chr3:15552948-15552967 MsG0380012368.01.T01:CDS 35.0%
TATGGAGATGGCTATTGTTA+TGG + Chr3:15549566-15549585 MsG0380012368.01.T01:exon 35.0%
TCAAGACTTACCTCACTAAA+TGG - Chr3:15549993-15550012 None:intergenic 35.0%
TCACACCAGAAAATAGAGAA+AGG - Chr3:15552471-15552490 None:intergenic 35.0%
TCACCAAAGGACAAATTGTT+CGG + Chr3:15551067-15551086 MsG0380012368.01.T01:CDS 35.0%
TCTTCTGATTGTCTTAACCT+TGG + Chr3:15546871-15546890 MsG0380012368.01.T01:five_prime_UTR 35.0%
TGACAGATCAAAAGAGAAAG+AGG - Chr3:15551815-15551834 None:intergenic 35.0%
TGCAGATTCTACACATAGTT+AGG - Chr3:15549826-15549845 None:intergenic 35.0%
TGCTAGGATGAGTATATCAA+TGG + Chr3:15551397-15551416 MsG0380012368.01.T01:intron 35.0%
TGTGATCTGCGTTTATGAAT+GGG + Chr3:15547890-15547909 MsG0380012368.01.T01:intron 35.0%
TGTTCCAGGAAATGTTGATA+TGG + Chr3:15549792-15549811 MsG0380012368.01.T01:intron 35.0%
TTAGTAAACATGGCATCCAT+AGG + Chr3:15549002-15549021 MsG0380012368.01.T01:intron 35.0%
TTCTCGATGAATTTGTGTTC+AGG + Chr3:15553322-15553341 MsG0380012368.01.T01:intron 35.0%
TTCTTCCAACCTTTCTAGAT+GGG - Chr3:15553481-15553500 None:intergenic 35.0%
TTTAGTCAATGTTCCTAGTG+TGG + Chr3:15547575-15547594 MsG0380012368.01.T01:intron 35.0%
! AAGTAGACCTTTTCGATTCT+AGG + Chr3:15552724-15552743 MsG0380012368.01.T01:intron 35.0%
! AGTCAAATTACTAGAGGCAT+AGG + Chr3:15547320-15547339 MsG0380012368.01.T01:intron 35.0%
! ATTTTCCGTTTCCATAAGTC+AGG - Chr3:15551936-15551955 None:intergenic 35.0%
! CTCTTCCAATTTGATTTCAC+TGG - Chr3:15552110-15552129 None:intergenic 35.0%
! GACAACTTTTACTCCATGAA+GGG - Chr3:15553180-15553199 None:intergenic 35.0%
! GCTATCCTTTCTCTATTTTC+TGG + Chr3:15552463-15552482 MsG0380012368.01.T01:intron 35.0%
! TTAAAGTATGGACTATGCAC+AGG - Chr3:15550993-15551012 None:intergenic 35.0%
! TTGTAAAGCATCCCTCAATA+TGG + Chr3:15549548-15549567 MsG0380012368.01.T01:exon 35.0%
! TTTAGCTTACTTAGCTGAGT+AGG + Chr3:15550433-15550452 MsG0380012368.01.T01:intron 35.0%
!! CAAAAGGGTTGGCTTTATAA+TGG + Chr3:15547053-15547072 MsG0380012368.01.T01:intron 35.0%
!! GGTTGATGGAATGTGTAAAT+TGG - Chr3:15546593-15546612 None:intergenic 35.0%
!! TAAAGCAAGTACTGGATTTG+TGG + Chr3:15550721-15550740 MsG0380012368.01.T01:intron 35.0%
!! TATCAAGTGTCTGTCACTTT+CGG + Chr3:15548323-15548342 MsG0380012368.01.T01:intron 35.0%
!! TATGACTTTGTAAGCATTGG+CGG + Chr3:15551364-15551383 MsG0380012368.01.T01:intron 35.0%
!! TTGGCTAGTTCTGATATTTG+AGG + Chr3:15547864-15547883 MsG0380012368.01.T01:intron 35.0%
!! TTGTGCTGTTGTTCGTTTTA+AGG + Chr3:15547705-15547724 MsG0380012368.01.T01:intron 35.0%
!!! AAAACTTTTTTCTGCCCCTT+TGG + Chr3:15551622-15551641 MsG0380012368.01.T01:intron 35.0%
!!! ACGTAGAAGTTTTGTTAGTG+AGG + Chr3:15547917-15547936 MsG0380012368.01.T01:intron 35.0%
!!! ACTTTTTTCTCTTTGTGGAG+GGG + Chr3:15548464-15548483 MsG0380012368.01.T01:five_prime_UTR 35.0%
!!! GTATTGTGTTTTGGCTGAAT+TGG + Chr3:15551728-15551747 MsG0380012368.01.T01:intron 35.0%
AAACGGAAAATCAGTTGCAC+GGG + Chr3:15551945-15551964 MsG0380012368.01.T01:CDS 40.0%
AAATCAAAGGACGAGCCAAA+GGG - Chr3:15551640-15551659 None:intergenic 40.0%
AAGAATCTCAAGCAACTGCA+AGG + Chr3:15553504-15553523 MsG0380012368.01.T01:CDS 40.0%
ACAGACGAGAAGGGTTATTA+TGG - Chr3:15550828-15550847 None:intergenic 40.0%
ACTGCTTGAAACCAGTGATT+GGG + Chr3:15551025-15551044 MsG0380012368.01.T01:CDS 40.0%
AGATGGCTATTGTTATGGCA+AGG + Chr3:15549571-15549590 MsG0380012368.01.T01:CDS 40.0%
ATGTACAAAGATTCTGTGCG+CGG + Chr3:15551895-15551914 MsG0380012368.01.T01:CDS 40.0%
CAATAGCCATCTCCATATTG+AGG - Chr3:15549563-15549582 None:intergenic 40.0%
CAATCTAGTCCCTTTCATTC+TGG - Chr3:15551526-15551545 None:intergenic 40.0%
CACCAAAGGACAAATTGTTC+GGG + Chr3:15551068-15551087 MsG0380012368.01.T01:CDS 40.0%
CATTATCCATTAAGTGGGGT+CGG - Chr3:15547458-15547477 None:intergenic 40.0%
CTACAATGCTCAACACCATA+AGG + Chr3:15549273-15549292 MsG0380012368.01.T01:intron 40.0%
CTAGAGATTAATGTGCTGGA+TGG + Chr3:15547378-15547397 MsG0380012368.01.T01:intron 40.0%
CTATTGTTATGGCAAGGGTA+TGG + Chr3:15549577-15549596 MsG0380012368.01.T01:intron 40.0%
CTCTCACTTATTAAGGAAGG+TGG - Chr3:15550620-15550639 None:intergenic 40.0%
CTGAGTTTGTGTCTACTTAC+AGG - Chr3:15548532-15548551 None:intergenic 40.0%
CTGATCATGAATGTGAAACG+AGG - Chr3:15553613-15553632 None:intergenic 40.0%
GAAACGGAAAATCAGTTGCA+CGG + Chr3:15551944-15551963 MsG0380012368.01.T01:CDS 40.0%
GATGAAAGCTATAGTAGCGA+GGG - Chr3:15546737-15546756 None:intergenic 40.0%
GATGGCAAGCATTTCTTGTT+GGG + Chr3:15550389-15550408 MsG0380012368.01.T01:intron 40.0%
GATGGCTATTGTTATGGCAA+GGG + Chr3:15549572-15549591 MsG0380012368.01.T01:CDS 40.0%
GATTAACGATACACCACACT+AGG - Chr3:15547591-15547610 None:intergenic 40.0%
GCAAATTCTTCGCAATTGCA+TGG + Chr3:15549843-15549862 MsG0380012368.01.T01:intron 40.0%
GCCATGTCTCATTCCAAATA+CGG - Chr3:15549489-15549508 None:intergenic 40.0%
GGCATTCATCATTGCTTCAA+CGG + Chr3:15552794-15552813 MsG0380012368.01.T01:intron 40.0%
GGGCAAAAAGAATCAAACTC+TGG - Chr3:15550922-15550941 None:intergenic 40.0%
GGTATAATGAGCATGTTGTG+TGG + Chr3:15552946-15552965 MsG0380012368.01.T01:intron 40.0%
GTAACATCAGGATTCTGGTA+TGG + Chr3:15549688-15549707 MsG0380012368.01.T01:intron 40.0%
GTATTAGAGCCTACATGACA+TGG - Chr3:15550576-15550595 None:intergenic 40.0%
GTGATCTGCGTTTATGAATG+GGG + Chr3:15547891-15547910 MsG0380012368.01.T01:intron 40.0%
GTTACAGCGCTATAACATAG+TGG + Chr3:15553247-15553266 MsG0380012368.01.T01:intron 40.0%
GTTCTTCCAACCTTTCTAGA+TGG - Chr3:15553482-15553501 None:intergenic 40.0%
TACTGCTTGAAACCAGTGAT+TGG + Chr3:15551024-15551043 MsG0380012368.01.T01:CDS 40.0%
TCAAAGTATAAGAGTGGCCA+AGG - Chr3:15551496-15551515 None:intergenic 40.0%
TCATGGAACTGGAAGAGAAA+TGG + Chr3:15549880-15549899 MsG0380012368.01.T01:intron 40.0%
TCCAAGACCTTTGATACTTC+AGG - Chr3:15548502-15548521 None:intergenic 40.0%
TCTATCTCTCCCATCTAGAA+AGG + Chr3:15553469-15553488 MsG0380012368.01.T01:CDS 40.0%
TGATGGCAAGCATTTCTTGT+TGG + Chr3:15550388-15550407 MsG0380012368.01.T01:intron 40.0%
TGCAATACTTGCGTGATGTT+GGG + Chr3:15552425-15552444 MsG0380012368.01.T01:intron 40.0%
TGCAGTTGCTTGAGATTCTT+TGG - Chr3:15553504-15553523 None:intergenic 40.0%
TGGAAGAACAACAAGCTAAG+AGG + Chr3:15548823-15548842 MsG0380012368.01.T01:five_prime_UTR 40.0%
TGGATAATGAGCTTCACCAA+AGG + Chr3:15551054-15551073 MsG0380012368.01.T01:CDS 40.0%
! ACCTAACCGCTGAAGTTTTT+GGG + Chr3:15550850-15550869 MsG0380012368.01.T01:intron 40.0%
! ACTCTAACAAGTTGAGTCGT+TGG - Chr3:15553210-15553229 None:intergenic 40.0%
! CAAGGTGTCCATCATAACAT+CGG - Chr3:15551478-15551497 None:intergenic 40.0%
! CAATGAGCATAGTAGCCTTA+TGG - Chr3:15549291-15549310 None:intergenic 40.0%
! CTCTAACAAGTTGAGTCGTT+GGG - Chr3:15553209-15553228 None:intergenic 40.0%
! CTCTTTTCATGGCACACAAT+TGG - Chr3:15551332-15551351 None:intergenic 40.0%
! CTCTTTTGATCTGTCAAAGC+AGG + Chr3:15551819-15551838 MsG0380012368.01.T01:CDS 40.0%
! CTTACCTCATGACTGATTTC+TGG + Chr3:15551138-15551157 MsG0380012368.01.T01:intron 40.0%
! GAATTGGGAGGATTTTTCTG+TGG + Chr3:15551744-15551763 MsG0380012368.01.T01:intron 40.0%
! GACTGATTTCTGGATTACCA+GGG + Chr3:15551148-15551167 MsG0380012368.01.T01:intron 40.0%
! GGACAACTTTTACTCCATGA+AGG - Chr3:15553181-15553200 None:intergenic 40.0%
! GTATATGAGATGGGTTTAGG+TGG + Chr3:15547229-15547248 MsG0380012368.01.T01:intron 40.0%
! TATTTGGAATGAGACATGGC+TGG + Chr3:15549489-15549508 MsG0380012368.01.T01:five_prime_UTR 40.0%
! TCCTGAAGTATCAAAGGTCT+TGG + Chr3:15548498-15548517 MsG0380012368.01.T01:five_prime_UTR 40.0%
! TGACTGATTTCTGGATTACC+AGG + Chr3:15551147-15551166 MsG0380012368.01.T01:intron 40.0%
! TGCTACTCCTGAAGTATCAA+AGG + Chr3:15548492-15548511 MsG0380012368.01.T01:five_prime_UTR 40.0%
! TGGCGGGTATTTAATATGCT+AGG + Chr3:15551381-15551400 MsG0380012368.01.T01:intron 40.0%
! TTGATGATCTGTGATGAGCT+TGG + Chr3:15547550-15547569 MsG0380012368.01.T01:intron 40.0%
!! ATGACTTTGTAAGCATTGGC+GGG + Chr3:15551365-15551384 MsG0380012368.01.T01:intron 40.0%
!! GCTCGTCCTTTGATTTGATT+GGG + Chr3:15551644-15551663 MsG0380012368.01.T01:intron 40.0%
!! GGTTAACCCACTGATTTCAA+GGG - Chr3:15551182-15551201 None:intergenic 40.0%
!! GTTAACCCACTGATTTCAAG+GGG - Chr3:15551181-15551200 None:intergenic 40.0%
!! TGGTTAACCCACTGATTTCA+AGG - Chr3:15551183-15551202 None:intergenic 40.0%
!! TGTGCCATGAAAAGAGCATT+AGG + Chr3:15551336-15551355 MsG0380012368.01.T01:intron 40.0%
AAGTTGAGTCGTTGGGAGTT+GGG - Chr3:15553202-15553221 None:intergenic 45.0%
AATCAAAGGACGAGCCAAAG+GGG - Chr3:15551639-15551658 None:intergenic 45.0%
AATCCATGCCAGGGAAATTG+TGG - Chr3:15546816-15546835 None:intergenic 45.0%
ACTCTTCCCCTTGAAATCAG+TGG + Chr3:15551172-15551191 MsG0380012368.01.T01:intron 45.0%
ACTTCTAGACGTGATCGTTG+TGG + Chr3:15552172-15552191 MsG0380012368.01.T01:CDS 45.0%
AGCATCCCTCAATATGGAGA+TGG + Chr3:15549554-15549573 MsG0380012368.01.T01:exon 45.0%
AGTAAGGAGAGTAGACCAGA+TGG + Chr3:15547287-15547306 MsG0380012368.01.T01:intron 45.0%
ATCAGGATTCTGGTATGGAC+TGG + Chr3:15549693-15549712 MsG0380012368.01.T01:intron 45.0%
ATCCATGCCAGGGAAATTGT+GGG - Chr3:15546815-15546834 None:intergenic 45.0%
ATCTCAAGCAACTGCAAGGA+AGG + Chr3:15553508-15553527 MsG0380012368.01.T01:CDS 45.0%
ATGGAGTAGAAGAACGACCA+AGG - Chr3:15546891-15546910 None:intergenic 45.0%
CAAATCAAAGGACGAGCCAA+AGG - Chr3:15551641-15551660 None:intergenic 45.0%
CAGTTGCTTCTTGATGTTCC+AGG + Chr3:15549778-15549797 MsG0380012368.01.T01:intron 45.0%
CTCCCGAACAATTTGTCCTT+TGG - Chr3:15551073-15551092 None:intergenic 45.0%
CTCTTCCCCTTGAAATCAGT+GGG + Chr3:15551173-15551192 MsG0380012368.01.T01:intron 45.0%
GACACAAACTCAGCATGCAT+TGG + Chr3:15548539-15548558 MsG0380012368.01.T01:intron 45.0%
GAGGCTAGCACAACATTACT+TGG + Chr3:15550782-15550801 MsG0380012368.01.T01:intron 45.0%
GATGAATTAATACACCCGGC+TGG + Chr3:15549734-15549753 MsG0380012368.01.T01:intron 45.0%
GGATGAAAGCTATAGTAGCG+AGG - Chr3:15546738-15546757 None:intergenic 45.0%
GGTTTCAAGCAGTAGACCTT+TGG - Chr3:15551018-15551037 None:intergenic 45.0%
GTGCAATACTTGCGTGATGT+TGG + Chr3:15552424-15552443 MsG0380012368.01.T01:intron 45.0%
GTTAGGTGAACAGACGAGAA+GGG - Chr3:15550837-15550856 None:intergenic 45.0%
TCACAAGTAGTACATCCGCA+GGG + Chr3:15548389-15548408 MsG0380012368.01.T01:five_prime_UTR 45.0%
TCCCAAAAACTTCAGCGGTT+AGG - Chr3:15550854-15550873 None:intergenic 45.0%
TCTCTCCCATCTAGAAAGGT+TGG + Chr3:15553473-15553492 MsG0380012368.01.T01:CDS 45.0%
TCTTGCATTCTCCTGTCTTC+AGG + Chr3:15549371-15549390 MsG0380012368.01.T01:intron 45.0%
TGACTACTCTACTCACCATC+TGG - Chr3:15547305-15547324 None:intergenic 45.0%
TGGTGACTCACTTACTCCAA+AGG + Chr3:15546945-15546964 MsG0380012368.01.T01:five_prime_UTR 45.0%
TGTTGTGTGGGGTGATAAAG+AGG + Chr3:15552959-15552978 MsG0380012368.01.T01:CDS 45.0%
TTGGTTGCATCAGCCGTATT+TGG + Chr3:15549473-15549492 MsG0380012368.01.T01:intron 45.0%
! AGCAACTGCAAGGAAGGTTT+TGG + Chr3:15553514-15553533 MsG0380012368.01.T01:CDS 45.0%
! CACCTAACCGCTGAAGTTTT+TGG + Chr3:15550849-15550868 MsG0380012368.01.T01:intron 45.0%
! CTATTTTCTACTACTCCCGG+TGG - Chr3:15553587-15553606 None:intergenic 45.0%
! GCCGTATTTGGAATGAGACA+TGG + Chr3:15549485-15549504 MsG0380012368.01.T01:intron 45.0%
! GGAGGATTTTTCTGTGGTTC+TGG + Chr3:15551750-15551769 MsG0380012368.01.T01:intron 45.0%
! GTCAGTGTCATTGTCATGTG+TGG - Chr3:15552531-15552550 None:intergenic 45.0%
! TAATGTTGTGCTAGCCTCCA+AGG - Chr3:15550780-15550799 None:intergenic 45.0%
! TTTTCTCTTTGTGGAGGGGA+AGG + Chr3:15548468-15548487 MsG0380012368.01.T01:five_prime_UTR 45.0%
!! CGATGTTATGATGGACACCT+TGG + Chr3:15551476-15551495 MsG0380012368.01.T01:intron 45.0%
!! GGCTCGTCCTTTGATTTGAT+TGG + Chr3:15551643-15551662 MsG0380012368.01.T01:intron 45.0%
!!! TGTGTTTTGGCTGAATTGGG+AGG + Chr3:15551732-15551751 MsG0380012368.01.T01:intron 45.0%
AACCAGTGATTGGGCTCAAG+TGG + Chr3:15551034-15551053 MsG0380012368.01.T01:CDS 50.0%
AAGAATCTGCTCAAGCCCTG+CGG - Chr3:15548407-15548426 None:intergenic 50.0%
AAGATTTAGTCCTGGGCTCC+TGG + Chr3:15548063-15548082 MsG0380012368.01.T01:intron 50.0%
AGAGGAGAAGAATCCATGCC+AGG - Chr3:15546826-15546845 None:intergenic 50.0%
AGCACATGGCAACGAAAACG+TGG + Chr3:15550746-15550765 MsG0380012368.01.T01:intron 50.0%
AGTCAAAGCTCAACTCAGCC+AGG - Chr3:15548084-15548103 None:intergenic 50.0%
AGTCAAGAATTGCTCCACCC+AGG - Chr3:15551110-15551129 None:intergenic 50.0%
ATCACGCAAACTGGTGCATC+AGG + Chr3:15550326-15550345 MsG0380012368.01.T01:intron 50.0%
ATCCACTTGAGCCCAATCAC+TGG - Chr3:15551039-15551058 None:intergenic 50.0%
ATGTAGCCGACCCCACTTAA+TGG + Chr3:15547449-15547468 MsG0380012368.01.T01:intron 50.0%
ATTAAGTGGGGTCGGCTACA+TGG - Chr3:15547450-15547469 None:intergenic 50.0%
CAAGATCACCTTCGGCCTAA+TGG + Chr3:15551970-15551989 MsG0380012368.01.T01:CDS 50.0%
CACGGGTACAAGATCACCTT+CGG + Chr3:15551962-15551981 MsG0380012368.01.T01:CDS 50.0%
CTATAGTAGCGAGGGAGACA+GGG - Chr3:15546729-15546748 None:intergenic 50.0%
CTGGATTTGTGGTCAGCACA+TGG + Chr3:15550732-15550751 MsG0380012368.01.T01:intron 50.0%
GAAATTGTGGGAGCCATGAG+GGG - Chr3:15546803-15546822 None:intergenic 50.0%
GACTCGCATATACACTCCCA+TGG + Chr3:15553013-15553032 MsG0380012368.01.T01:CDS 50.0%
GAGAACCGAGTTCGATTCCT+GGG + Chr3:15551090-15551109 MsG0380012368.01.T01:intron 50.0%
GAGGAGAAGAATCCATGCCA+GGG - Chr3:15546825-15546844 None:intergenic 50.0%
GCTTTCATCCTTCAATGGCG+TGG + Chr3:15546748-15546767 MsG0380012368.01.T01:five_prime_UTR 50.0%
GGAAATTGTGGGAGCCATGA+GGG - Chr3:15546804-15546823 None:intergenic 50.0%
GGGTGGAGCAATTCTTGACT+AGG + Chr3:15551110-15551129 MsG0380012368.01.T01:intron 50.0%
GGTTAGGTGAACAGACGAGA+AGG - Chr3:15550838-15550857 None:intergenic 50.0%
GTCACAAGTAGTACATCCGC+AGG + Chr3:15548388-15548407 MsG0380012368.01.T01:five_prime_UTR 50.0%
TGACACTGACACGTAGACAC+CGG + Chr3:15552541-15552560 MsG0380012368.01.T01:CDS 50.0%
TGATACCACCACGCCATTGA+AGG - Chr3:15546759-15546778 None:intergenic 50.0%
TGCCATCTGTGTGCACCATT+AGG - Chr3:15551988-15552007 None:intergenic 50.0%
TTCATCCTTCAATGGCGTGG+TGG + Chr3:15546751-15546770 MsG0380012368.01.T01:five_prime_UTR 50.0%
! CAAGTTGAGTCGTTGGGAGT+TGG - Chr3:15553203-15553222 None:intergenic 50.0%
! GGTGCTCGGAGTACTCTTTA+AGG + Chr3:15549755-15549774 MsG0380012368.01.T01:intron 50.0%
!! ATTGGCATGGTGGTGGTTGA+TGG - Chr3:15546607-15546626 None:intergenic 50.0%
!! GGATGTAGGTACCGAACGTA+AGG - Chr3:15549100-15549119 None:intergenic 50.0%
!! TGGTTGTGGTGGTTGGTGAT+TGG - Chr3:15546625-15546644 None:intergenic 50.0%
AACCGAGTTCGATTCCTGGG+TGG + Chr3:15551093-15551112 MsG0380012368.01.T01:intron 55.0%
ACTACTCCCGGTGGAGATTG+CGG - Chr3:15553578-15553597 None:intergenic 55.0%
AGTGAGGAGGAGGAGGATCT+TGG - Chr3:15546701-15546720 None:intergenic 55.0%
CATGGCTCCCACAATTTCCC+TGG + Chr3:15546805-15546824 MsG0380012368.01.T01:five_prime_UTR 55.0%
CTCCACCCAGGAATCGAACT+CGG - Chr3:15551098-15551117 None:intergenic 55.0%
CTCCCACAATTTCCCTGGCA+TGG + Chr3:15546810-15546829 MsG0380012368.01.T01:five_prime_UTR 55.0%
GAGGAGGATCTTGGAGGTGA+AGG - Chr3:15546692-15546711 None:intergenic 55.0%
GAGGATCTTGGAGGTGAAGG+AGG - Chr3:15546689-15546708 None:intergenic 55.0%
GATCTTGGAGGTGAAGGAGG+AGG - Chr3:15546686-15546705 None:intergenic 55.0%
GCTATAGTAGCGAGGGAGAC+AGG - Chr3:15546730-15546749 None:intergenic 55.0%
GGACAAAAGGGTCGCTGGAT+CGG - Chr3:15546782-15546801 None:intergenic 55.0%
GGAGAACCGAGTTCGATTCC+TGG + Chr3:15551089-15551108 MsG0380012368.01.T01:intron 55.0%
GGAGCCATGAGGGGACAAAA+GGG - Chr3:15546794-15546813 None:intergenic 55.0%
GGCCTAATGGTGCACACAGA+TGG + Chr3:15551983-15552002 MsG0380012368.01.T01:CDS 55.0%
GGCTTGAGCAGATTCTTCCC+TGG + Chr3:15548410-15548429 MsG0380012368.01.T01:five_prime_UTR 55.0%
GGGAAATTGTGGGAGCCATG+AGG - Chr3:15546805-15546824 None:intergenic 55.0%
TAATACACCCGGCTGGTGCT+CGG + Chr3:15549741-15549760 MsG0380012368.01.T01:intron 55.0%
TGGCAACGAAAACGTGGCGT+TGG + Chr3:15550752-15550771 MsG0380012368.01.T01:intron 55.0%
TGTGTGCACCATTAGGCCGA+AGG - Chr3:15551981-15552000 None:intergenic 55.0%
! AAAACGTGGCGTTGGAGCCT+TGG + Chr3:15550760-15550779 MsG0380012368.01.T01:intron 55.0%
! GGTGTCGTGACACGTGTCAT+AGG + Chr3:15552606-15552625 MsG0380012368.01.T01:intron 55.0%
!! GTGGTGGTTGGTGATTGGCA+TGG - Chr3:15546620-15546639 None:intergenic 55.0%
!! GTGGTTGGTGATTGGCATGG+TGG - Chr3:15546617-15546636 None:intergenic 55.0%
!! GTTGGTGATTGGCATGGTGG+TGG - Chr3:15546614-15546633 None:intergenic 55.0%
!! TTTCAAGGGGAAGAGTGCCC+TGG - Chr3:15551168-15551187 None:intergenic 55.0%
AGACAGGGAGGAGAGTGAGG+AGG - Chr3:15546714-15546733 None:intergenic 60.0%
CTTGGAGGTGAAGGAGGAGG+AGG - Chr3:15546683-15546702 None:intergenic 60.0%
GAGGAGGAGGAGGATCTTGG+AGG - Chr3:15546698-15546717 None:intergenic 60.0%
GGGAGCCATGAGGGGACAAA+AGG - Chr3:15546795-15546814 None:intergenic 60.0%
GTGGAGGTGGTTGTGGTGGT+TGG - Chr3:15546632-15546651 None:intergenic 60.0%
TAGTAGCGAGGGAGACAGGG+AGG - Chr3:15546726-15546745 None:intergenic 60.0%
TGAGGGGACAAAAGGGTCGC+TGG - Chr3:15546787-15546806 None:intergenic 60.0%
TGTACCGCCGCAATCTCCAC+CGG + Chr3:15553568-15553587 MsG0380012368.01.T01:CDS 60.0%
! AGAGTACTCCGAGCACCAGC+CGG - Chr3:15549752-15549771 None:intergenic 60.0%
! GCGACCCTTTTGTCCCCTCA+TGG + Chr3:15546787-15546806 MsG0380012368.01.T01:five_prime_UTR 60.0%
!! AGGTGGTGGAGGTGGGTTGA+CGG - Chr3:15546663-15546682 None:intergenic 60.0%
!! TGGAGGTGGGTTGACGGAGA+GGG - Chr3:15546657-15546676 None:intergenic 60.0%
ACTCCCGGTGGAGATTGCGG+CGG - Chr3:15553575-15553594 None:intergenic 65.0%
CAGGGAGGAGAGTGAGGAGG+AGG - Chr3:15546711-15546730 None:intergenic 65.0%
CTCAACTCAGCCAGGAGCCC+AGG - Chr3:15548076-15548095 None:intergenic 65.0%
GAGTACTCCGAGCACCAGCC+GGG - Chr3:15549751-15549770 None:intergenic 65.0%
GGAGGAGAGTGAGGAGGAGG+AGG - Chr3:15546708-15546727 None:intergenic 65.0%
GGAGGTGAAGGAGGAGGAGG+TGG - Chr3:15546680-15546699 None:intergenic 65.0%
GGGAGACAGGGAGGAGAGTG+AGG - Chr3:15546717-15546736 None:intergenic 65.0%
GGGTGTGGAGGTGGTTGTGG+TGG - Chr3:15546636-15546655 None:intergenic 65.0%
GGTGAAGGAGGAGGAGGTGG+TGG - Chr3:15546677-15546696 None:intergenic 65.0%
GTACCGCCGCAATCTCCACC+GGG + Chr3:15553569-15553588 MsG0380012368.01.T01:CDS 65.0%
! ACGTGGCGTTGGAGCCTTGG+AGG + Chr3:15550763-15550782 MsG0380012368.01.T01:intron 65.0%
! GAAGGAGGAGGAGGTGGTGG+AGG - Chr3:15546674-15546693 None:intergenic 65.0%
! GAGGGGTGTGGAGGTGGTTG+TGG - Chr3:15546639-15546658 None:intergenic 65.0%
! GTTGACGGAGAGGGGTGTGG+AGG - Chr3:15546648-15546667 None:intergenic 65.0%
! TGGGTTGACGGAGAGGGGTG+TGG - Chr3:15546651-15546670 None:intergenic 65.0%
!! GAGGAGGAGGTGGTGGAGGT+GGG - Chr3:15546670-15546689 None:intergenic 65.0%
!! GGAGGTGGGTTGACGGAGAG+GGG - Chr3:15546656-15546675 None:intergenic 65.0%
!! GTGGAGGTGGGTTGACGGAG+AGG - Chr3:15546658-15546677 None:intergenic 65.0%
! GACGGAGAGGGGTGTGGAGG+TGG - Chr3:15546645-15546664 None:intergenic 70.0%
!! GGAGGAGGAGGTGGTGGAGG+TGG - Chr3:15546671-15546690 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 15546462 15553867 15546462 ID=MsG0380012368.01;Name=MsG0380012368.01
Chr3 mRNA 15546462 15553867 15546462 ID=MsG0380012368.01.T01;Parent=MsG0380012368.01;Name=MsG0380012368.01.T01;_AED=0.37;_eAED=0.43;_QI=753|0.6|0.72|1|0.6|0.54|11|239|309
Chr3 exon 15546462 15546499 15546462 ID=MsG0380012368.01.T01:exon:825;Parent=MsG0380012368.01.T01
Chr3 exon 15546536 15546966 15546536 ID=MsG0380012368.01.T01:exon:826;Parent=MsG0380012368.01.T01
Chr3 exon 15548382 15548531 15548382 ID=MsG0380012368.01.T01:exon:827;Parent=MsG0380012368.01.T01
Chr3 exon 15548792 15548844 15548792 ID=MsG0380012368.01.T01:exon:828;Parent=MsG0380012368.01.T01
Chr3 exon 15549486 15549593 15549486 ID=MsG0380012368.01.T01:exon:829;Parent=MsG0380012368.01.T01
Chr3 exon 15550975 15551098 15550975 ID=MsG0380012368.01.T01:exon:830;Parent=MsG0380012368.01.T01
Chr3 exon 15551803 15552028 15551803 ID=MsG0380012368.01.T01:exon:831;Parent=MsG0380012368.01.T01
Chr3 exon 15552111 15552252 15552111 ID=MsG0380012368.01.T01:exon:832;Parent=MsG0380012368.01.T01
Chr3 exon 15552525 15552562 15552525 ID=MsG0380012368.01.T01:exon:833;Parent=MsG0380012368.01.T01
Chr3 exon 15552947 15553034 15552947 ID=MsG0380012368.01.T01:exon:834;Parent=MsG0380012368.01.T01
Chr3 exon 15553344 15553867 15553344 ID=MsG0380012368.01.T01:exon:835;Parent=MsG0380012368.01.T01
Chr3 five_prime_UTR 15546462 15546499 15546462 ID=MsG0380012368.01.T01:five_prime_utr;Parent=MsG0380012368.01.T01
Chr3 five_prime_UTR 15546536 15546966 15546536 ID=MsG0380012368.01.T01:five_prime_utr;Parent=MsG0380012368.01.T01
Chr3 five_prime_UTR 15548382 15548531 15548382 ID=MsG0380012368.01.T01:five_prime_utr;Parent=MsG0380012368.01.T01
Chr3 five_prime_UTR 15548792 15548844 15548792 ID=MsG0380012368.01.T01:five_prime_utr;Parent=MsG0380012368.01.T01
Chr3 five_prime_UTR 15549486 15549566 15549486 ID=MsG0380012368.01.T01:five_prime_utr;Parent=MsG0380012368.01.T01
Chr3 CDS 15549567 15549593 15549567 ID=MsG0380012368.01.T01:cds;Parent=MsG0380012368.01.T01
Chr3 CDS 15550975 15551098 15550975 ID=MsG0380012368.01.T01:cds;Parent=MsG0380012368.01.T01
Chr3 CDS 15551803 15552028 15551803 ID=MsG0380012368.01.T01:cds;Parent=MsG0380012368.01.T01
Chr3 CDS 15552111 15552252 15552111 ID=MsG0380012368.01.T01:cds;Parent=MsG0380012368.01.T01
Chr3 CDS 15552525 15552562 15552525 ID=MsG0380012368.01.T01:cds;Parent=MsG0380012368.01.T01
Chr3 CDS 15552947 15553034 15552947 ID=MsG0380012368.01.T01:cds;Parent=MsG0380012368.01.T01
Chr3 CDS 15553344 15553628 15553344 ID=MsG0380012368.01.T01:cds;Parent=MsG0380012368.01.T01
Chr3 three_prime_UTR 15553629 15553867 15553629 ID=MsG0380012368.01.T01:three_prime_utr;Parent=MsG0380012368.01.T01
Gene Sequence

>MsG0380012368.01.T01

ATGGAGATGGCTATTGTTATGGCAAGGATTAAGGCTGCTGAGCCTGTGCATAGTCCATACTTTAAATCCAAAGGTCTACTGCTTGAAACCAGTGATTGGGCTCAAGTGGATAATGAGCTTCACCAAAGGACAAATTGTTCGGGAGAACCGATTCTAGATCCCTCTTTCTCTTTTGATCTGTCAAAGCAGGTGACGATGTTCAAGAAGAATTATGATCATCTTCCAAAGGATACATACTTTGGCATGTACAAAGATTCTGTGCGCGGCAATCCAAACTATTTCCTGACTTATGGAAACGGAAAATCAGTTGCACGGGTACAAGATCACCTTCGGCCTAATGGTGCACACAGATGGCATAATTATATGAAAACCCCAAATGAAATCAAATTGGAAGAGGCTGCTGTTTTACATTACACGTACGCCAAATTCTCAGATTTAACTTCTAGACGTGATCGTTGTGGTTGCAAACCTACAAAAGAAGATGTTAAAAGATGCTTCATGTTGGAATTTGACAGATCTACACCACACATGACAATGACACTGACACGTAGACACCGGTATAATGAGCATGTTGTGTGGGGTGATAAAGAGGTGAAGATTAAACTGTTGAGGAAAGGAATATTGACTCGCATATACACTCCCATGGTCATAATACAAAGTTTGAGGGAATCTGGAGTATTCAGTTCTGTCATTGCATCAGCCCCATCACTTTCTAAAGAAAAGTTTTTGCATTCAATTGACAGTAGCAATTCAACAAGAGCTGTTGCATCTCTATCTCTCCCATCTAGAAAGGTTGGAAGAACCAAAGAATCTCAAGCAACTGCAAGGAAGGTTTTGGATCTTGAATCTTCTGTATTTCAAGAATTGGCTGTACCGCCGCAATCTCCACCGGGAGTAGTAGAAAATAGTAACCTCGTTTCACATTCATGA
Protein sequence

>MsG0380012368.01.T01

MEMAIVMARIKAAEPVHSPYFKSKGLLLETSDWAQVDNELHQRTNCSGEPILDPSFSFDLSKQVTMFKKNYDHLPKDTYFGMYKDSVRGNPNYFLTYGNGKSVARVQDHLRPNGAHRWHNYMKTPNEIKLEEAAVLHYTYAKFSDLTSRRDRCGCKPTKEDVKRCFMLEFDRSTPHMTMTLTRRHRYNEHVVWGDKEVKIKLLRKGILTRIYTPMVIIQSLRESGVFSSVIASAPSLSKEKFLHSIDSSNSTRAVASLSLPSRKVGRTKESQATARKVLDLESSVFQELAVPPQSPPGVVENSNLVSHS*