Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015357.01.T01 | XP_013460715.1 | 95.255 | 274 | 13 | 0 | 3 | 276 | 2 | 275 | 0 | 540 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015357.01.T01 | Q9LHT0 | 65.251 | 259 | 90 | 0 | 16 | 274 | 5 | 263 | 4.41E-130 | 372 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015357.01.T01 | A0A072UY64 | 95.255 | 274 | 13 | 0 | 3 | 276 | 2 | 275 | 0.0 | 540 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0380012818.01 | MsG0380015357.01 | 0.803150 | 4.000013e-49 | 1.995267e-46 |
| MsG0380015357.01 | MsG0680035905.01 | 0.833546 | 5.011518e-56 | 5.790274e-53 |
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015357.01.T01 | MTR_3g068155 | 95.255 | 274 | 13 | 0 | 3 | 276 | 2 | 275 | 0.0 | 540 |
| MsG0380015357.01.T01 | MTR_3g068175 | 79.044 | 272 | 57 | 0 | 5 | 276 | 2 | 273 | 2.13e-158 | 441 |
| MsG0380015357.01.T01 | MTR_3g068175 | 77.899 | 276 | 57 | 1 | 5 | 276 | 2 | 277 | 3.60e-156 | 436 |
| MsG0380015357.01.T01 | MTR_3g068085 | 76.265 | 257 | 61 | 0 | 20 | 276 | 15 | 271 | 1.83e-149 | 419 |
| MsG0380015357.01.T01 | MTR_3g068070 | 75.000 | 260 | 65 | 0 | 10 | 269 | 5 | 264 | 2.16e-147 | 414 |
| MsG0380015357.01.T01 | MTR_3g068065 | 72.656 | 256 | 70 | 0 | 20 | 275 | 17 | 272 | 7.38e-141 | 397 |
| MsG0380015357.01.T01 | MTR_4g064883 | 64.981 | 257 | 90 | 0 | 16 | 272 | 10 | 266 | 3.30e-129 | 367 |
| MsG0380015357.01.T01 | MTR_4g064887 | 61.776 | 259 | 99 | 0 | 8 | 266 | 3 | 261 | 1.32e-120 | 346 |
| MsG0380015357.01.T01 | MTR_7g063320 | 57.414 | 263 | 108 | 1 | 8 | 266 | 3 | 265 | 2.88e-108 | 314 |
| MsG0380015357.01.T01 | MTR_7g063390 | 58.462 | 260 | 104 | 1 | 11 | 266 | 7 | 266 | 1.49e-105 | 307 |
| MsG0380015357.01.T01 | MTR_7g063330 | 56.489 | 262 | 111 | 1 | 7 | 265 | 2 | 263 | 2.57e-105 | 307 |
| MsG0380015357.01.T01 | MTR_7g063270 | 57.364 | 258 | 107 | 1 | 11 | 265 | 7 | 264 | 5.30e-105 | 306 |
| MsG0380015357.01.T01 | MTR_7g063360 | 56.538 | 260 | 109 | 1 | 11 | 266 | 7 | 266 | 4.29e-102 | 299 |
| MsG0380015357.01.T01 | MTR_7g063260 | 55.985 | 259 | 110 | 1 | 11 | 265 | 7 | 265 | 2.09e-101 | 297 |
| MsG0380015357.01.T01 | MTR_4g064883 | 66.162 | 198 | 67 | 0 | 16 | 213 | 10 | 207 | 1.09e-96 | 283 |
| MsG0380015357.01.T01 | MTR_4g064887 | 60.396 | 202 | 80 | 0 | 8 | 209 | 3 | 204 | 3.97e-89 | 264 |
| MsG0380015357.01.T01 | MTR_7g063270 | 48.837 | 258 | 80 | 4 | 11 | 265 | 7 | 215 | 1.65e-78 | 237 |
| MsG0380015357.01.T01 | MTR_4g132850 | 33.197 | 244 | 158 | 4 | 22 | 264 | 9 | 248 | 8.68e-32 | 118 |
| MsG0380015357.01.T01 | MTR_3g085740 | 32.922 | 243 | 158 | 4 | 26 | 266 | 81 | 320 | 7.15e-31 | 117 |
| MsG0380015357.01.T01 | MTR_7g071680 | 32.117 | 274 | 150 | 7 | 20 | 265 | 29 | 294 | 3.14e-26 | 104 |
| MsG0380015357.01.T01 | MTR_7g094510 | 30.435 | 253 | 162 | 7 | 20 | 263 | 6 | 253 | 1.05e-25 | 102 |
| MsG0380015357.01.T01 | MTR_7g094520 | 31.154 | 260 | 161 | 8 | 16 | 264 | 7 | 259 | 1.91e-25 | 101 |
| MsG0380015357.01.T01 | MTR_1196s0010 | 31.818 | 242 | 154 | 5 | 25 | 263 | 279 | 512 | 4.15e-25 | 104 |
| MsG0380015357.01.T01 | MTR_4g052350 | 31.600 | 250 | 164 | 6 | 20 | 266 | 14 | 259 | 2.06e-24 | 99.4 |
| MsG0380015357.01.T01 | MTR_4g058840 | 28.571 | 259 | 174 | 7 | 20 | 269 | 11 | 267 | 4.67e-23 | 95.9 |
| MsG0380015357.01.T01 | MTR_4g058820 | 28.571 | 259 | 174 | 7 | 20 | 269 | 11 | 267 | 4.67e-23 | 95.9 |
| MsG0380015357.01.T01 | MTR_4g058810 | 27.692 | 260 | 177 | 7 | 19 | 269 | 10 | 267 | 8.12e-23 | 95.1 |
| MsG0380015357.01.T01 | MTR_4g052320 | 29.600 | 250 | 170 | 5 | 20 | 266 | 8 | 254 | 1.41e-22 | 94.4 |
| MsG0380015357.01.T01 | MTR_4g052300 | 29.644 | 253 | 165 | 7 | 20 | 266 | 8 | 253 | 1.32e-21 | 91.7 |
| MsG0380015357.01.T01 | MTR_7g107670 | 29.104 | 268 | 172 | 8 | 11 | 267 | 26 | 286 | 2.00e-21 | 91.7 |
| MsG0380015357.01.T01 | MTR_4g052340 | 28.897 | 263 | 165 | 8 | 20 | 268 | 14 | 268 | 2.11e-21 | 91.3 |
| MsG0380015357.01.T01 | MTR_8g442750 | 30.000 | 260 | 159 | 8 | 20 | 264 | 14 | 265 | 1.41e-20 | 89.4 |
| MsG0380015357.01.T01 | MTR_4g078630 | 29.344 | 259 | 164 | 8 | 20 | 265 | 19 | 271 | 2.95e-20 | 88.2 |
| MsG0380015357.01.T01 | MTR_7g083870 | 31.047 | 277 | 165 | 9 | 7 | 265 | 19 | 287 | 4.02e-20 | 88.2 |
| MsG0380015357.01.T01 | MTR_5g098650 | 80.392 | 51 | 10 | 0 | 226 | 276 | 124 | 174 | 6.85e-20 | 84.7 |
| MsG0380015357.01.T01 | MTR_3g020670 | 30.882 | 272 | 171 | 10 | 6 | 265 | 4 | 270 | 2.98e-18 | 82.8 |
| MsG0380015357.01.T01 | MTR_4g131740 | 28.906 | 256 | 170 | 6 | 20 | 266 | 40 | 292 | 6.78e-18 | 82.0 |
| MsG0380015357.01.T01 | MTR_1g068955 | 29.070 | 258 | 158 | 9 | 20 | 262 | 14 | 261 | 3.23e-17 | 79.7 |
| MsG0380015357.01.T01 | MTR_6g023990 | 28.352 | 261 | 175 | 8 | 12 | 264 | 6 | 262 | 9.13e-17 | 78.2 |
| MsG0380015357.01.T01 | MTR_1g082760 | 26.357 | 258 | 177 | 7 | 20 | 268 | 40 | 293 | 5.05e-16 | 76.6 |
| MsG0380015357.01.T01 | MTR_1g051165 | 26.437 | 261 | 180 | 7 | 20 | 268 | 14 | 274 | 5.36e-16 | 76.6 |
| MsG0380015357.01.T01 | MTR_7g110130 | 28.295 | 258 | 174 | 8 | 17 | 267 | 3 | 256 | 5.63e-16 | 76.3 |
| MsG0380015357.01.T01 | MTR_6g023590 | 28.854 | 253 | 168 | 8 | 20 | 264 | 13 | 261 | 8.95e-16 | 75.5 |
| MsG0380015357.01.T01 | MTR_7g105460 | 28.159 | 277 | 175 | 11 | 11 | 275 | 4 | 268 | 1.56e-15 | 75.1 |
| MsG0380015357.01.T01 | MTR_3g068075 | 52.239 | 67 | 31 | 1 | 128 | 193 | 1 | 67 | 2.22e-15 | 70.1 |
| MsG0380015357.01.T01 | MTR_4g058830 | 29.936 | 157 | 106 | 3 | 117 | 269 | 57 | 213 | 3.14e-15 | 73.2 |
| MsG0380015357.01.T01 | MTR_1579s0020 | 37.500 | 88 | 54 | 1 | 186 | 273 | 1 | 87 | 3.21e-15 | 69.7 |
| MsG0380015357.01.T01 | MTR_2g090165 | 28.794 | 257 | 173 | 9 | 17 | 267 | 3 | 255 | 8.84e-15 | 72.8 |
| MsG0380015357.01.T01 | MTR_7g105580 | 26.210 | 248 | 159 | 6 | 20 | 263 | 8 | 235 | 9.40e-15 | 72.4 |
| MsG0380015357.01.T01 | MTR_6g023950 | 29.845 | 258 | 159 | 8 | 20 | 264 | 13 | 261 | 1.35e-14 | 72.4 |
| MsG0380015357.01.T01 | MTR_7g105590 | 29.016 | 193 | 128 | 6 | 15 | 204 | 5 | 191 | 3.07e-14 | 70.1 |
| MsG0380015357.01.T01 | MTR_6g023600 | 29.249 | 253 | 167 | 8 | 20 | 264 | 13 | 261 | 1.61e-13 | 69.3 |
| MsG0380015357.01.T01 | MTR_8g089575 | 29.439 | 214 | 140 | 6 | 22 | 228 | 47 | 256 | 3.30e-13 | 68.9 |
| MsG0380015357.01.T01 | MTR_7g110160 | 29.020 | 255 | 155 | 9 | 17 | 266 | 3 | 236 | 1.04e-12 | 66.6 |
| MsG0380015357.01.T01 | MTR_8g044240 | 25.000 | 232 | 150 | 6 | 20 | 238 | 69 | 289 | 7.52e-11 | 62.0 |
| MsG0380015357.01.T01 | MTR_7g105570 | 24.771 | 218 | 148 | 7 | 67 | 275 | 15 | 225 | 9.75e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015357.01.T01 | AT5G06060 | 65.251 | 259 | 90 | 0 | 16 | 274 | 5 | 263 | 4.50e-131 | 372 |
| MsG0380015357.01.T01 | AT2G29260 | 62.109 | 256 | 97 | 0 | 16 | 271 | 64 | 319 | 1.29e-119 | 345 |
| MsG0380015357.01.T01 | AT2G29290 | 62.791 | 258 | 94 | 1 | 16 | 271 | 3 | 260 | 1.43e-119 | 343 |
| MsG0380015357.01.T01 | AT1G07440 | 60.853 | 258 | 98 | 2 | 16 | 271 | 8 | 264 | 6.46e-117 | 336 |
| MsG0380015357.01.T01 | AT2G29150 | 60.606 | 264 | 101 | 2 | 10 | 271 | 6 | 268 | 2.41e-116 | 335 |
| MsG0380015357.01.T01 | AT1G07450 | 61.811 | 254 | 96 | 1 | 16 | 269 | 4 | 256 | 6.15e-116 | 333 |
| MsG0380015357.01.T01 | AT2G29360 | 60.385 | 260 | 103 | 0 | 10 | 269 | 6 | 265 | 2.85e-114 | 330 |
| MsG0380015357.01.T01 | AT2G29350 | 61.660 | 253 | 96 | 1 | 17 | 269 | 12 | 263 | 1.09e-112 | 326 |
| MsG0380015357.01.T01 | AT2G29370 | 58.846 | 260 | 107 | 0 | 10 | 269 | 6 | 265 | 6.95e-111 | 321 |
| MsG0380015357.01.T01 | AT2G29340 | 56.923 | 260 | 110 | 1 | 16 | 273 | 3 | 262 | 2.62e-110 | 319 |
| MsG0380015357.01.T01 | AT2G29340 | 57.364 | 258 | 108 | 1 | 16 | 271 | 3 | 260 | 1.31e-109 | 319 |
| MsG0380015357.01.T01 | AT2G29300 | 58.301 | 259 | 105 | 2 | 16 | 271 | 3 | 261 | 9.14e-109 | 315 |
| MsG0380015357.01.T01 | AT2G29330 | 58.527 | 258 | 105 | 1 | 16 | 271 | 3 | 260 | 3.53e-108 | 314 |
| MsG0380015357.01.T01 | AT2G29320 | 58.366 | 257 | 104 | 2 | 18 | 271 | 11 | 267 | 5.25e-107 | 311 |
| MsG0380015357.01.T01 | AT2G29310 | 57.364 | 258 | 108 | 1 | 16 | 271 | 3 | 260 | 5.26e-107 | 311 |
| MsG0380015357.01.T01 | AT2G30670 | 59.055 | 254 | 104 | 0 | 16 | 269 | 3 | 256 | 1.22e-106 | 310 |
| MsG0380015357.01.T01 | AT2G29290 | 61.345 | 238 | 90 | 1 | 36 | 271 | 6 | 243 | 2.95e-106 | 308 |
| MsG0380015357.01.T01 | AT2G29300 | 57.708 | 253 | 106 | 1 | 16 | 267 | 3 | 255 | 8.48e-105 | 306 |
| MsG0380015357.01.T01 | AT2G29350 | 60.889 | 225 | 87 | 1 | 45 | 269 | 2 | 225 | 2.76e-97 | 285 |
| MsG0380015357.01.T01 | AT2G29320 | 56.904 | 239 | 100 | 2 | 36 | 271 | 11 | 249 | 6.48e-96 | 283 |
| MsG0380015357.01.T01 | AT2G29310 | 55.882 | 238 | 103 | 1 | 36 | 271 | 21 | 258 | 5.91e-94 | 278 |
| MsG0380015357.01.T01 | AT2G29350 | 63.731 | 193 | 70 | 0 | 17 | 209 | 12 | 204 | 3.54e-88 | 262 |
| MsG0380015357.01.T01 | AT2G29340 | 56.701 | 194 | 84 | 0 | 16 | 209 | 3 | 196 | 1.18e-80 | 242 |
| MsG0380015357.01.T01 | AT2G29340 | 56.701 | 194 | 84 | 0 | 16 | 209 | 3 | 196 | 1.18e-80 | 242 |
| MsG0380015357.01.T01 | AT2G29310 | 58.247 | 194 | 81 | 0 | 16 | 209 | 3 | 196 | 1.37e-79 | 239 |
| MsG0380015357.01.T01 | AT2G29320 | 58.115 | 191 | 79 | 1 | 18 | 207 | 11 | 201 | 1.09e-77 | 234 |
| MsG0380015357.01.T01 | AT1G07440 | 60.494 | 162 | 64 | 0 | 16 | 177 | 8 | 169 | 1.00e-70 | 216 |
| MsG0380015357.01.T01 | AT2G29310 | 56.322 | 174 | 76 | 0 | 36 | 209 | 21 | 194 | 2.02e-66 | 206 |
| MsG0380015357.01.T01 | AT2G29170 | 64.444 | 90 | 32 | 0 | 17 | 106 | 13 | 102 | 1.11e-38 | 131 |
| MsG0380015357.01.T01 | AT5G18210 | 33.721 | 258 | 154 | 8 | 19 | 264 | 7 | 259 | 2.20e-30 | 115 |
| MsG0380015357.01.T01 | AT3G03980 | 32.841 | 271 | 161 | 8 | 9 | 263 | 3 | 268 | 2.29e-30 | 115 |
| MsG0380015357.01.T01 | AT4G05530 | 31.707 | 246 | 163 | 4 | 20 | 264 | 9 | 250 | 8.70e-30 | 113 |
| MsG0380015357.01.T01 | AT4G13180 | 32.331 | 266 | 166 | 7 | 10 | 266 | 3 | 263 | 1.07e-28 | 110 |
| MsG0380015357.01.T01 | AT1G24360 | 29.851 | 268 | 177 | 5 | 4 | 266 | 58 | 319 | 8.80e-28 | 109 |
| MsG0380015357.01.T01 | AT5G18210 | 33.750 | 240 | 142 | 8 | 19 | 246 | 7 | 241 | 5.44e-26 | 103 |
| MsG0380015357.01.T01 | AT1G63380 | 29.730 | 259 | 170 | 8 | 20 | 268 | 19 | 275 | 4.65e-24 | 98.6 |
| MsG0380015357.01.T01 | AT1G63380 | 29.730 | 259 | 170 | 8 | 20 | 268 | 17 | 273 | 4.83e-24 | 98.6 |
| MsG0380015357.01.T01 | AT1G63380 | 29.730 | 259 | 170 | 8 | 20 | 268 | 15 | 271 | 6.28e-24 | 98.2 |
| MsG0380015357.01.T01 | AT1G63380 | 29.730 | 259 | 170 | 8 | 20 | 268 | 22 | 278 | 7.55e-24 | 98.2 |
| MsG0380015357.01.T01 | AT3G04000 | 30.686 | 277 | 170 | 9 | 1 | 263 | 1 | 269 | 4.90e-23 | 95.5 |
| MsG0380015357.01.T01 | AT1G62610 | 27.519 | 258 | 177 | 7 | 20 | 268 | 13 | 269 | 9.73e-23 | 95.1 |
| MsG0380015357.01.T01 | AT1G62610 | 27.519 | 258 | 177 | 7 | 20 | 268 | 14 | 270 | 9.90e-23 | 95.1 |
| MsG0380015357.01.T01 | AT1G62610 | 27.519 | 258 | 177 | 7 | 20 | 268 | 19 | 275 | 1.05e-22 | 95.1 |
| MsG0380015357.01.T01 | AT1G62610 | 27.519 | 258 | 177 | 7 | 20 | 268 | 15 | 271 | 1.06e-22 | 94.7 |
| MsG0380015357.01.T01 | AT3G55310 | 28.405 | 257 | 175 | 6 | 20 | 268 | 17 | 272 | 8.14e-22 | 92.4 |
| MsG0380015357.01.T01 | AT1G54870 | 30.859 | 256 | 164 | 7 | 20 | 266 | 84 | 335 | 8.33e-22 | 93.6 |
| MsG0380015357.01.T01 | AT1G54870 | 30.859 | 256 | 164 | 7 | 20 | 266 | 82 | 333 | 8.46e-22 | 93.6 |
| MsG0380015357.01.T01 | AT3G51680 | 28.947 | 266 | 167 | 7 | 20 | 265 | 32 | 295 | 8.55e-22 | 92.8 |
| MsG0380015357.01.T01 | AT3G55290 | 27.626 | 257 | 177 | 6 | 20 | 268 | 17 | 272 | 1.31e-21 | 92.0 |
| MsG0380015357.01.T01 | AT3G55290 | 27.626 | 257 | 177 | 6 | 20 | 268 | 18 | 273 | 1.56e-21 | 91.7 |
| MsG0380015357.01.T01 | AT3G46170 | 27.626 | 257 | 177 | 6 | 20 | 268 | 26 | 281 | 6.09e-21 | 90.5 |
| MsG0380015357.01.T01 | AT3G05260 | 29.020 | 255 | 169 | 6 | 20 | 266 | 37 | 287 | 1.73e-20 | 89.0 |
| MsG0380015357.01.T01 | AT3G12800 | 26.482 | 253 | 174 | 6 | 22 | 264 | 12 | 262 | 1.88e-19 | 86.3 |
| MsG0380015357.01.T01 | AT3G26760 | 27.203 | 261 | 173 | 6 | 20 | 267 | 36 | 292 | 3.77e-19 | 85.5 |
| MsG0380015357.01.T01 | AT2G17845 | 26.616 | 263 | 177 | 7 | 20 | 269 | 47 | 306 | 3.81e-19 | 85.9 |
| MsG0380015357.01.T01 | AT1G52340 | 30.916 | 262 | 161 | 9 | 20 | 265 | 18 | 275 | 1.02e-17 | 81.3 |
| MsG0380015357.01.T01 | AT3G26770 | 28.077 | 260 | 170 | 6 | 20 | 267 | 41 | 295 | 7.36e-16 | 76.6 |
| MsG0380015357.01.T01 | AT4G03140 | 25.391 | 256 | 177 | 7 | 20 | 265 | 78 | 329 | 8.38e-16 | 76.6 |
| MsG0380015357.01.T01 | AT2G47130 | 26.984 | 252 | 175 | 7 | 20 | 266 | 6 | 253 | 1.43e-15 | 75.1 |
| MsG0380015357.01.T01 | AT3G42960 | 27.586 | 261 | 157 | 8 | 25 | 265 | 13 | 261 | 4.77e-14 | 70.9 |
| MsG0380015357.01.T01 | AT3G06060 | 27.317 | 205 | 140 | 3 | 25 | 225 | 42 | 241 | 1.02e-13 | 70.5 |
| MsG0380015357.01.T01 | AT3G06060 | 27.317 | 205 | 140 | 3 | 25 | 225 | 59 | 258 | 1.14e-13 | 70.5 |
| MsG0380015357.01.T01 | AT5G04900 | 28.780 | 205 | 136 | 7 | 3 | 201 | 61 | 261 | 3.46e-13 | 69.3 |
| MsG0380015357.01.T01 | AT3G47350 | 28.505 | 214 | 142 | 6 | 19 | 227 | 43 | 250 | 4.55e-13 | 68.6 |
| MsG0380015357.01.T01 | AT3G47350 | 28.505 | 214 | 142 | 6 | 19 | 227 | 43 | 250 | 4.80e-13 | 68.6 |
| MsG0380015357.01.T01 | AT5G19200 | 26.961 | 204 | 140 | 4 | 26 | 225 | 41 | 239 | 5.51e-12 | 65.5 |
| MsG0380015357.01.T01 | AT1G24470 | 27.228 | 202 | 136 | 6 | 16 | 210 | 46 | 243 | 1.86e-11 | 63.9 |
| MsG0380015357.01.T01 | AT1G49670 | 29.612 | 206 | 128 | 8 | 22 | 213 | 6 | 208 | 2.24e-11 | 64.3 |
| MsG0380015357.01.T01 | AT1G49670 | 29.612 | 206 | 128 | 8 | 22 | 213 | 6 | 208 | 2.68e-11 | 64.3 |
| MsG0380015357.01.T01 | AT5G10050 | 30.055 | 183 | 121 | 4 | 26 | 207 | 11 | 187 | 4.68e-11 | 62.4 |
| MsG0380015357.01.T01 | AT3G03330 | 25.628 | 199 | 139 | 4 | 11 | 202 | 32 | 228 | 6.07e-11 | 62.4 |
Find 68 sgRNAs with CRISPR-Local
Find 143 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCGGTGGCACTCGTGGAAT+CGG | 0.347184 | 3:+68968074 | MsG0380015357.01.T01:CDS |
| TGGAAGCCACTTGTTGAATA+AGG | 0.356666 | 3:-68968580 | None:intergenic |
| TACCCTCTTCTAAAAGAATC+TGG | 0.360756 | 3:+68969500 | MsG0380015357.01.T01:CDS |
| ATGTTCTACAAGTGGGGTTC+TGG | 0.364231 | 3:-68969789 | None:intergenic |
| AGAGAGTGAATAATACAAAA+TGG | 0.374675 | 3:+68967974 | MsG0380015357.01.T01:exon |
| CTTATGCCCACTTGAAATAC+TGG | 0.379196 | 3:+68970513 | MsG0380015357.01.T01:three_prime_UTR |
| ACCCGAAGAGGTCTCCTCTT+TGG | 0.381912 | 3:+68970363 | MsG0380015357.01.T01:CDS |
| GTGTTCATTTCATCTGTTGC+AGG | 0.395569 | 3:+68969536 | MsG0380015357.01.T01:CDS |
| GGACAAGTTATTTGTGTTGA+TGG | 0.402356 | 3:+68970424 | MsG0380015357.01.T01:CDS |
| ATCTCATGTAATTCTCATGC+TGG | 0.418009 | 3:-68970473 | None:intergenic |
| TAAAGGTCTAAATATATGTT+TGG | 0.427889 | 3:+68970614 | MsG0380015357.01.T01:three_prime_UTR |
| GTTGCAGGTGTGGTTAGCTT+AGG | 0.435339 | 3:+68969551 | MsG0380015357.01.T01:CDS |
| CACCAAAGAGGAGACCTCTT+CGG | 0.436189 | 3:-68970365 | None:intergenic |
| TCAATAAGTGCTTACAAGAA+TGG | 0.438266 | 3:+68968492 | MsG0380015357.01.T01:CDS |
| CAAGTGGCTTCCACTTTCAA+TGG | 0.445054 | 3:+68968590 | MsG0380015357.01.T01:CDS |
| GGTTCGGCAATGCGCTTAAG+AGG | 0.448812 | 3:-68970343 | None:intergenic |
| TGAATAAGGCTCTCTCTTTG+TGG | 0.452558 | 3:-68968566 | None:intergenic |
| AGAGGAGACCTCTTCGGGTT+CGG | 0.459507 | 3:-68970359 | None:intergenic |
| GTGAATGATCTAGTTGCATT+TGG | 0.466081 | 3:+68968431 | MsG0380015357.01.T01:CDS |
| GGAATGACAGCTCTTGTAAC+CGG | 0.471184 | 3:+68968056 | MsG0380015357.01.T01:CDS |
| TGCAACTAGATCATTCACTA+TGG | 0.473158 | 3:-68968426 | None:intergenic |
| ACCAAAGAGGAGACCTCTTC+GGG | 0.477426 | 3:-68970364 | None:intergenic |
| GGTATGCAAGTTGGCACAGA+TGG | 0.489580 | 3:-68969481 | None:intergenic |
| TCAGCAGTGTACTCAATGGT+TGG | 0.489827 | 3:-68969416 | None:intergenic |
| GTTGTCTATTGCCCATTCAC+AGG | 0.493489 | 3:-68969735 | None:intergenic |
| CTACTGTACACACTTGTTCA+AGG | 0.495979 | 3:+68968456 | MsG0380015357.01.T01:CDS |
| AATGGGCAATAGACAACATA+AGG | 0.496335 | 3:+68969741 | MsG0380015357.01.T01:CDS |
| GGTGTGGTTAGCTTAGGTAC+TGG | 0.499150 | 3:+68969557 | MsG0380015357.01.T01:CDS |
| TTCTTCAGCAGTGTACTCAA+TGG | 0.499815 | 3:-68969420 | None:intergenic |
| GACAAGTTATTTGTGTTGAT+GGG | 0.502183 | 3:+68970425 | MsG0380015357.01.T01:CDS |
| CCGGTGGCACTCGTGGAATC+GGG | 0.504977 | 3:+68968075 | MsG0380015357.01.T01:CDS |
| GTTGAGCTTGCCATTGAAAG+TGG | 0.515168 | 3:-68968600 | None:intergenic |
| CATTTCATCTGTTGCAGGTG+TGG | 0.515366 | 3:+68969541 | MsG0380015357.01.T01:CDS |
| CTTCTAAAAGAATCTGGAAA+GGG | 0.516926 | 3:+68969506 | MsG0380015357.01.T01:CDS |
| CTTGTAACCGGTGGCACTCG+TGG | 0.521899 | 3:+68968068 | MsG0380015357.01.T01:CDS |
| CCCGATTCCACGAGTGCCAC+CGG | 0.529955 | 3:-68968075 | None:intergenic |
| ATTTCAAAATCAAAAGCTTG+TGG | 0.536031 | 3:+68970300 | MsG0380015357.01.T01:CDS |
| GGACAGAGATGGTCTCTCAC+TGG | 0.538298 | 3:+68968035 | MsG0380015357.01.T01:CDS |
| TCTGTCTACGCAGCAAGTAA+AGG | 0.541483 | 3:+68969581 | MsG0380015357.01.T01:CDS |
| CCTGCTGCATCTTACATCAC+TGG | 0.543937 | 3:+68970403 | MsG0380015357.01.T01:CDS |
| AAATTACATGTTCTACAAGT+GGG | 0.546415 | 3:-68969796 | None:intergenic |
| TTAGAAGAGGGTATGCAAGT+TGG | 0.550420 | 3:-68969490 | None:intergenic |
| TTACAAGAATGGCAAAGTAA+AGG | 0.555353 | 3:+68968503 | MsG0380015357.01.T01:CDS |
| AGTGGGGTTCTGGTTGCCCA+TGG | 0.559899 | 3:-68969779 | None:intergenic |
| GAAACACATAGCAGCAGAGG+TGG | 0.561832 | 3:+68968014 | MsG0380015357.01.T01:CDS |
| AGAGAGCCTTATTCAACAAG+TGG | 0.562362 | 3:+68968574 | MsG0380015357.01.T01:CDS |
| TCTTCTAAAAGAATCTGGAA+AGG | 0.571398 | 3:+68969505 | MsG0380015357.01.T01:CDS |
| GAGCAACTGTGTTGTACCAT+GGG | 0.571833 | 3:+68969763 | MsG0380015357.01.T01:CDS |
| AAAATTACATGTTCTACAAG+TGG | 0.573526 | 3:-68969797 | None:intergenic |
| TCTCATGTAATTCTCATGCT+GGG | 0.575912 | 3:-68970472 | None:intergenic |
| GCGCATTGCCGAACCCGAAG+AGG | 0.578494 | 3:+68970351 | MsG0380015357.01.T01:CDS |
| GGAGCAACTGTGTTGTACCA+TGG | 0.580178 | 3:+68969762 | MsG0380015357.01.T01:CDS |
| GCAGCAGAGGTGGACAGAGA+TGG | 0.586161 | 3:+68968024 | MsG0380015357.01.T01:CDS |
| GTAGAAACACATAGCAGCAG+AGG | 0.588040 | 3:+68968011 | MsG0380015357.01.T01:CDS |
| CGGTCTGTGATGTAAGCTCT+CGG | 0.593629 | 3:+68968543 | MsG0380015357.01.T01:CDS |
| CAAGTTATTTGTGTTGATGG+GGG | 0.602087 | 3:+68970427 | MsG0380015357.01.T01:CDS |
| ATGCTTTAGGTAAATAACGT+GGG | 0.610168 | 3:+68969377 | MsG0380015357.01.T01:intron |
| CCAGTGATGTAAGATGCAGC+AGG | 0.631919 | 3:-68970403 | None:intergenic |
| ACAAGTTATTTGTGTTGATG+GGG | 0.632558 | 3:+68970426 | MsG0380015357.01.T01:CDS |
| AAGTTGGCACAGATGGAATG+AGG | 0.634142 | 3:-68969474 | None:intergenic |
| AAGATGCAGCAGGTAAGCAA+AGG | 0.634488 | 3:-68970393 | None:intergenic |
| TATGCTTTAGGTAAATAACG+TGG | 0.635045 | 3:+68969376 | MsG0380015357.01.T01:intron |
| AATTACATGTTCTACAAGTG+GGG | 0.636533 | 3:-68969795 | None:intergenic |
| GCAAAGGAAAGTCACCAAAG+AGG | 0.638884 | 3:-68970377 | None:intergenic |
| CTAGCCACCAGTATTTCAAG+TGG | 0.656662 | 3:-68970520 | None:intergenic |
| ATGACAGCTCTTGTAACCGG+TGG | 0.671270 | 3:+68968059 | MsG0380015357.01.T01:CDS |
| ATGCCCACTTGAAATACTGG+TGG | 0.683160 | 3:+68970516 | MsG0380015357.01.T01:three_prime_UTR |
| TAGCCACCAGTATTTCAAGT+GGG | 0.692051 | 3:-68970519 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAATAGTAATTATTTGTA+AGG | - | Chr3:68969033-68969052 | None:intergenic | 10.0% |
| !! | TTATTAATGATTTATATGTT+TGG | - | Chr3:68968648-68968667 | None:intergenic | 10.0% |
| !! | ACTCTTTATAATTAAGTTAA+TGG | - | Chr3:68968778-68968797 | None:intergenic | 15.0% |
| !! | ATTGTTCTTACAAAAAATAA+AGG | + | Chr3:68970597-68970616 | MsG0380015357.01.T01:three_prime_UTR | 15.0% |
| !! | TAAATTTACACCAAAAATTA+AGG | + | Chr3:68969315-68969334 | MsG0380015357.01.T01:intron | 15.0% |
| !!! | AAAATTTTGATGTCAAATAT+GGG | + | Chr3:68969916-68969935 | MsG0380015357.01.T01:intron | 15.0% |
| !!! | TTTTTACATTTTTTCATTCA+TGG | + | Chr3:68970149-68970168 | MsG0380015357.01.T01:intron | 15.0% |
| !! | AAAAACACTATAAAACTCAA+AGG | - | Chr3:68970112-68970131 | None:intergenic | 20.0% |
| !! | AAAATACACATAAAACTCAA+AGG | - | Chr3:68969945-68969964 | None:intergenic | 20.0% |
| !! | AATAATGAAATAAGAGAGAA+GGG | - | Chr3:68968113-68968132 | None:intergenic | 20.0% |
| !! | ATCAAAATAAATAATGATGC+AGG | - | Chr3:68968150-68968169 | None:intergenic | 20.0% |
| !! | TAAAGGTCTAAATATATGTT+TGG | + | Chr3:68970614-68970633 | MsG0380015357.01.T01:three_prime_UTR | 20.0% |
| !! | TAGTATTATTATCATCTGTT+AGG | + | Chr3:68970063-68970082 | MsG0380015357.01.T01:intron | 20.0% |
| !! | TCAAAATAAATAATGATGCA+GGG | - | Chr3:68968149-68968168 | None:intergenic | 20.0% |
| !! | TTAAAACAGAGAGAAAAATA+AGG | - | Chr3:68970567-68970586 | None:intergenic | 20.0% |
| !! | TTATAGTTGAACATCAAATA+CGG | - | Chr3:68970037-68970056 | None:intergenic | 20.0% |
| !!! | AAAAGATAAGGAAGTATTTT+TGG | - | Chr3:68968177-68968196 | None:intergenic | 20.0% |
| !!! | CAAAATTTTGATGTCAAATA+TGG | + | Chr3:68969915-68969934 | MsG0380015357.01.T01:intron | 20.0% |
| !!! | TTGGATAATTTTGAAGATAA+AGG | - | Chr3:68968955-68968974 | None:intergenic | 20.0% |
| !!! | TTTTTTGTTCAAACTAACTA+TGG | + | Chr3:68970228-68970247 | MsG0380015357.01.T01:intron | 20.0% |
| ! | AAAATTACATGTTCTACAAG+TGG | - | Chr3:68969800-68969819 | None:intergenic | 25.0% |
| ! | AAATTACATGTTCTACAAGT+GGG | - | Chr3:68969799-68969818 | None:intergenic | 25.0% |
| ! | ACCTTAAGAGAGTTTATAAA+CGG | + | Chr3:68968923-68968942 | MsG0380015357.01.T01:intron | 25.0% |
| ! | AGAGAGTGAATAATACAAAA+TGG | + | Chr3:68967974-68967993 | MsG0380015357.01.T01:exon | 25.0% |
| ! | ATAATGAAATAAGAGAGAAG+GGG | - | Chr3:68968112-68968131 | None:intergenic | 25.0% |
| ! | ATTATAAAGAGTGATGACAA+TGG | + | Chr3:68968786-68968805 | MsG0380015357.01.T01:intron | 25.0% |
| ! | ATTTCAAAATCAAAAGCTTG+TGG | + | Chr3:68970300-68970319 | MsG0380015357.01.T01:CDS | 25.0% |
| ! | GAATAATGAAATAAGAGAGA+AGG | - | Chr3:68968114-68968133 | None:intergenic | 25.0% |
| ! | TAACTTACTTATTTCGTTGA+TGG | + | Chr3:68969829-68969848 | MsG0380015357.01.T01:intron | 25.0% |
| ! | TAATCAGCTTACAAAAAATC+TGG | + | Chr3:68969712-68969731 | MsG0380015357.01.T01:CDS | 25.0% |
| ! | TATTATGTAGACACATTCAT+TGG | - | Chr3:68969869-68969888 | None:intergenic | 25.0% |
| ! | TCTTAAGCAGATACATAAAA+AGG | - | Chr3:68969081-68969100 | None:intergenic | 25.0% |
| ! | TTGCAAATATGTATGATTCA+TGG | - | Chr3:68969351-68969370 | None:intergenic | 25.0% |
| ! | TTTGCAAGAATTTATGCTTT+AGG | + | Chr3:68969364-68969383 | MsG0380015357.01.T01:intron | 25.0% |
| !! | CAAAGTGATTCCTTAATTTT+TGG | - | Chr3:68969328-68969347 | None:intergenic | 25.0% |
| !! | GTAAGTACATTGTTTAAAGT+TGG | + | Chr3:68969244-68969263 | MsG0380015357.01.T01:intron | 25.0% |
| !! | TCGTTTAAATGTTTTACACA+CGG | + | Chr3:68968221-68968240 | MsG0380015357.01.T01:intron | 25.0% |
| AAACGACGCTAATCTTAAAA+CGG | - | Chr3:68968207-68968226 | None:intergenic | 30.0% | |
| AATTACATGTTCTACAAGTG+GGG | - | Chr3:68969798-68969817 | None:intergenic | 30.0% | |
| AATTGCAGCTGAAAATTCAA+TGG | - | Chr3:68969693-68969712 | None:intergenic | 30.0% | |
| ACCAACACTACAACATAATT+GGG | + | Chr3:68968244-68968263 | MsG0380015357.01.T01:intron | 30.0% | |
| ACCGTTTATAAACTCTCTTA+AGG | - | Chr3:68968927-68968946 | None:intergenic | 30.0% | |
| ATTCATTTGACACATTCTCT+AGG | + | Chr3:68968399-68968418 | MsG0380015357.01.T01:intron | 30.0% | |
| CAATGGATGAAACATAATTG+TGG | - | Chr3:68969676-68969695 | None:intergenic | 30.0% | |
| CTATTGGACTAAGTTTGAAT+TGG | + | Chr3:68968715-68968734 | MsG0380015357.01.T01:intron | 30.0% | |
| GAAGAATGTCTATTGAAGAT+AGG | - | Chr3:68970190-68970209 | None:intergenic | 30.0% | |
| GTACTTACTAGACATATCAA+AGG | - | Chr3:68969232-68969251 | None:intergenic | 30.0% | |
| TAGAGAATGTGTCAAATGAA+TGG | - | Chr3:68968400-68968419 | None:intergenic | 30.0% | |
| TCAATAAGTGCTTACAAGAA+TGG | + | Chr3:68968492-68968511 | MsG0380015357.01.T01:CDS | 30.0% | |
| TGCTTCTTGAATTCATCATT+TGG | + | Chr3:68969179-68969198 | MsG0380015357.01.T01:intron | 30.0% | |
| TTACAAGAATGGCAAAGTAA+AGG | + | Chr3:68968503-68968522 | MsG0380015357.01.T01:CDS | 30.0% | |
| ! | ACAAGTTATTTGTGTTGATG+GGG | + | Chr3:68970426-68970445 | MsG0380015357.01.T01:CDS | 30.0% |
| ! | ACTAGACATATCAAAGGTTT+TGG | - | Chr3:68969226-68969245 | None:intergenic | 30.0% |
| ! | ATGCTTTAGGTAAATAACGT+GGG | + | Chr3:68969377-68969396 | MsG0380015357.01.T01:intron | 30.0% |
| ! | ATGGCAAAGTAAAGGATTTT+CGG | + | Chr3:68968511-68968530 | MsG0380015357.01.T01:CDS | 30.0% |
| ! | ATTGTTGACTGTTCTATTCA+TGG | + | Chr3:68968678-68968697 | MsG0380015357.01.T01:intron | 30.0% |
| ! | CTTCTAAAAGAATCTGGAAA+GGG | + | Chr3:68969506-68969525 | MsG0380015357.01.T01:CDS | 30.0% |
| ! | GACAAGTTATTTGTGTTGAT+GGG | + | Chr3:68970425-68970444 | MsG0380015357.01.T01:CDS | 30.0% |
| ! | TATGCTTTAGGTAAATAACG+TGG | + | Chr3:68969376-68969395 | MsG0380015357.01.T01:intron | 30.0% |
| ! | TCTTCTAAAAGAATCTGGAA+AGG | + | Chr3:68969505-68969524 | MsG0380015357.01.T01:CDS | 30.0% |
| ! | TTGATCAATGTTTAGAGTTG+AGG | + | Chr3:68969124-68969143 | MsG0380015357.01.T01:intron | 30.0% |
| !! | CAAGTTTGTTATGGACTTAT+GGG | - | Chr3:68968854-68968873 | None:intergenic | 30.0% |
| !! | TCAAGTTTGTTATGGACTTA+TGG | - | Chr3:68968855-68968874 | None:intergenic | 30.0% |
| !! | TCACTATTTGACTTGATGTT+TGG | - | Chr3:68968974-68968993 | None:intergenic | 30.0% |
| !! | TTCCAGATTCTTTTAGAAGA+GGG | - | Chr3:68969505-68969524 | None:intergenic | 30.0% |
| !! | TTTCCAGATTCTTTTAGAAG+AGG | - | Chr3:68969506-68969525 | None:intergenic | 30.0% |
| !!! | GGTGTTATCTTTTTTCAATG+TGG | - | Chr3:68968906-68968925 | None:intergenic | 30.0% |
| AAAAAATCTGGCCTGTGAAT+GGG | + | Chr3:68969724-68969743 | MsG0380015357.01.T01:CDS | 35.0% | |
| AATGGGCAATAGACAACATA+AGG | + | Chr3:68969741-68969760 | MsG0380015357.01.T01:CDS | 35.0% | |
| AGGTCTGCTTATTATCATAC+AGG | + | Chr3:68970083-68970102 | MsG0380015357.01.T01:intron | 35.0% | |
| ATCTCATGTAATTCTCATGC+TGG | - | Chr3:68970476-68970495 | None:intergenic | 35.0% | |
| GAATGTGTCAAATGAATGGA+TGG | - | Chr3:68968396-68968415 | None:intergenic | 35.0% | |
| GACCAACACTACAACATAAT+TGG | + | Chr3:68968243-68968262 | MsG0380015357.01.T01:intron | 35.0% | |
| GGACAAGTTATTTGTGTTGA+TGG | + | Chr3:68970424-68970443 | MsG0380015357.01.T01:CDS | 35.0% | |
| GGATCTATGCAGAAAACTAT+TGG | + | Chr3:68968699-68968718 | MsG0380015357.01.T01:intron | 35.0% | |
| GTGAATGATCTAGTTGCATT+TGG | + | Chr3:68968431-68968450 | MsG0380015357.01.T01:CDS | 35.0% | |
| TAGTAGAGCTCTTAGTAACA+CGG | - | Chr3:68968303-68968322 | None:intergenic | 35.0% | |
| TCCCAATTATGTTGTAGTGT+TGG | - | Chr3:68968248-68968267 | None:intergenic | 35.0% | |
| TCTCATGTAATTCTCATGCT+GGG | - | Chr3:68970475-68970494 | None:intergenic | 35.0% | |
| TGCAACTAGATCATTCACTA+TGG | - | Chr3:68968429-68968448 | None:intergenic | 35.0% | |
| TTCAAGAAGCAACAAAAACC+AGG | - | Chr3:68969170-68969189 | None:intergenic | 35.0% | |
| ! | AACAACAAACTGTTTCTTCC+TGG | + | Chr3:68969149-68969168 | MsG0380015357.01.T01:intron | 35.0% |
| ! | AGTAAAGGATTTTCGGTTAC+TGG | + | Chr3:68968518-68968537 | MsG0380015357.01.T01:CDS | 35.0% |
| ! | CAAACTTGAGTTGTTGCTAT+CGG | + | Chr3:68968866-68968885 | MsG0380015357.01.T01:intron | 35.0% |
| ! | CAAGTTATTTGTGTTGATGG+GGG | + | Chr3:68970427-68970446 | MsG0380015357.01.T01:CDS | 35.0% |
| ! | TACCCTCTTCTAAAAGAATC+TGG | + | Chr3:68969500-68969519 | MsG0380015357.01.T01:CDS | 35.0% |
| !! | ACACATTCATTGGTTCTATG+TGG | - | Chr3:68969859-68969878 | None:intergenic | 35.0% |
| !! | CACATTCATTGGTTCTATGT+GGG | - | Chr3:68969858-68969877 | None:intergenic | 35.0% |
| !! | GCAACAACTCAAGTTTGTTA+TGG | - | Chr3:68968863-68968882 | None:intergenic | 35.0% |
| AACGGAGGGAGTAAAAGATA+AGG | - | Chr3:68968189-68968208 | None:intergenic | 40.0% | |
| CAAAAAATCTGGCCTGTGAA+TGG | + | Chr3:68969723-68969742 | MsG0380015357.01.T01:CDS | 40.0% | |
| CTACTGTACACACTTGTTCA+AGG | + | Chr3:68968456-68968475 | MsG0380015357.01.T01:CDS | 40.0% | |
| CTTATGCCCACTTGAAATAC+TGG | + | Chr3:68970513-68970532 | MsG0380015357.01.T01:three_prime_UTR | 40.0% | |
| GACGCTAATCTTAAAACGGA+GGG | - | Chr3:68968203-68968222 | None:intergenic | 40.0% | |
| GAGTGATGACAATGGTAAAG+TGG | + | Chr3:68968794-68968813 | MsG0380015357.01.T01:intron | 40.0% | |
| GTGTTCATTTCATCTGTTGC+AGG | + | Chr3:68969536-68969555 | MsG0380015357.01.T01:CDS | 40.0% | |
| TGAATAAGGCTCTCTCTTTG+TGG | - | Chr3:68968569-68968588 | None:intergenic | 40.0% | |
| TTCTTCAGCAGTGTACTCAA+TGG | - | Chr3:68969423-68969442 | None:intergenic | 40.0% | |
| ! | AGGATTTTCGGTTACTGGAT+CGG | + | Chr3:68968523-68968542 | MsG0380015357.01.T01:CDS | 40.0% |
| ! | TAGCCACCAGTATTTCAAGT+GGG | - | Chr3:68970522-68970541 | None:intergenic | 40.0% |
| ! | TGGAAGCCACTTGTTGAATA+AGG | - | Chr3:68968583-68968602 | None:intergenic | 40.0% |
| ! | TTAGAAGAGGGTATGCAAGT+TGG | - | Chr3:68969493-68969512 | None:intergenic | 40.0% |
| !! | AGAGAGCCTTATTCAACAAG+TGG | + | Chr3:68968574-68968593 | MsG0380015357.01.T01:CDS | 40.0% |
| AAGATGCAGCAGGTAAGCAA+AGG | - | Chr3:68970396-68970415 | None:intergenic | 45.0% | |
| AAGTTGGCACAGATGGAATG+AGG | - | Chr3:68969477-68969496 | None:intergenic | 45.0% | |
| ATGCCCACTTGAAATACTGG+TGG | + | Chr3:68970516-68970535 | MsG0380015357.01.T01:three_prime_UTR | 45.0% | |
| ATGTTCTACAAGTGGGGTTC+TGG | - | Chr3:68969792-68969811 | None:intergenic | 45.0% | |
| CAAGTGGCTTCCACTTTCAA+TGG | + | Chr3:68968590-68968609 | MsG0380015357.01.T01:CDS | 45.0% | |
| CATTTCATCTGTTGCAGGTG+TGG | + | Chr3:68969541-68969560 | MsG0380015357.01.T01:CDS | 45.0% | |
| CGACGCTAATCTTAAAACGG+AGG | - | Chr3:68968204-68968223 | None:intergenic | 45.0% | |
| CTAGCCACCAGTATTTCAAG+TGG | - | Chr3:68970523-68970542 | None:intergenic | 45.0% | |
| GAGCAACTGTGTTGTACCAT+GGG | + | Chr3:68969763-68969782 | MsG0380015357.01.T01:CDS | 45.0% | |
| GATGGGGGATTAACTGTGTT+TGG | + | Chr3:68970442-68970461 | MsG0380015357.01.T01:CDS | 45.0% | |
| GCAAAGGAAAGTCACCAAAG+AGG | - | Chr3:68970380-68970399 | None:intergenic | 45.0% | |
| GGAATGACAGCTCTTGTAAC+CGG | + | Chr3:68968056-68968075 | MsG0380015357.01.T01:CDS | 45.0% | |
| GTAGAAACACATAGCAGCAG+AGG | + | Chr3:68968011-68968030 | MsG0380015357.01.T01:CDS | 45.0% | |
| GTTGAGCTTGCCATTGAAAG+TGG | - | Chr3:68968603-68968622 | None:intergenic | 45.0% | |
| GTTGTCTATTGCCCATTCAC+AGG | - | Chr3:68969738-68969757 | None:intergenic | 45.0% | |
| TCAGCAGTGTACTCAATGGT+TGG | - | Chr3:68969419-68969438 | None:intergenic | 45.0% | |
| TCTGTCTACGCAGCAAGTAA+AGG | + | Chr3:68969581-68969600 | MsG0380015357.01.T01:CDS | 45.0% | |
| !! | TACAAAAAAAAAAAAAAATA+TGG | - | Chr3:68970277-68970296 | None:intergenic | 5.0% |
| ACCAAAGAGGAGACCTCTTC+GGG | - | Chr3:68970367-68970386 | None:intergenic | 50.0% | |
| ATGACAGCTCTTGTAACCGG+TGG | + | Chr3:68968059-68968078 | MsG0380015357.01.T01:CDS | 50.0% | |
| CACCAAAGAGGAGACCTCTT+CGG | - | Chr3:68970368-68970387 | None:intergenic | 50.0% | |
| CCAGTGATGTAAGATGCAGC+AGG | - | Chr3:68970406-68970425 | None:intergenic | 50.0% | |
| CCTGCTGCATCTTACATCAC+TGG | + | Chr3:68970403-68970422 | MsG0380015357.01.T01:CDS | 50.0% | |
| CGGTCTGTGATGTAAGCTCT+CGG | + | Chr3:68968543-68968562 | MsG0380015357.01.T01:CDS | 50.0% | |
| GAAACACATAGCAGCAGAGG+TGG | + | Chr3:68968014-68968033 | MsG0380015357.01.T01:CDS | 50.0% | |
| GGAGCAACTGTGTTGTACCA+TGG | + | Chr3:68969762-68969781 | MsG0380015357.01.T01:CDS | 50.0% | |
| ! | GGTATGCAAGTTGGCACAGA+TGG | - | Chr3:68969484-68969503 | None:intergenic | 50.0% |
| !! | GGTGTGGTTAGCTTAGGTAC+TGG | + | Chr3:68969557-68969576 | MsG0380015357.01.T01:CDS | 50.0% |
| !! | GTTGCAGGTGTGGTTAGCTT+AGG | + | Chr3:68969551-68969570 | MsG0380015357.01.T01:CDS | 50.0% |
| ACCCGAAGAGGTCTCCTCTT+TGG | + | Chr3:68970363-68970382 | MsG0380015357.01.T01:CDS | 55.0% | |
| GGACAGAGATGGTCTCTCAC+TGG | + | Chr3:68968035-68968054 | MsG0380015357.01.T01:CDS | 55.0% | |
| GGTTCGGCAATGCGCTTAAG+AGG | - | Chr3:68970346-68970365 | None:intergenic | 55.0% | |
| ! | AGAGGAGACCTCTTCGGGTT+CGG | - | Chr3:68970362-68970381 | None:intergenic | 55.0% |
| ACCGGTGGCACTCGTGGAAT+CGG | + | Chr3:68968074-68968093 | MsG0380015357.01.T01:CDS | 60.0% | |
| CTTGTAACCGGTGGCACTCG+TGG | + | Chr3:68968068-68968087 | MsG0380015357.01.T01:CDS | 60.0% | |
| GCAGCAGAGGTGGACAGAGA+TGG | + | Chr3:68968024-68968043 | MsG0380015357.01.T01:CDS | 60.0% | |
| ! | AGTGGGGTTCTGGTTGCCCA+TGG | - | Chr3:68969782-68969801 | None:intergenic | 60.0% |
| CCCGATTCCACGAGTGCCAC+CGG | - | Chr3:68968078-68968097 | None:intergenic | 65.0% | |
| CCGGTGGCACTCGTGGAATC+GGG | + | Chr3:68968075-68968094 | MsG0380015357.01.T01:CDS | 65.0% | |
| GCGCATTGCCGAACCCGAAG+AGG | + | Chr3:68970351-68970370 | MsG0380015357.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 68967963 | 68970642 | 68967963 | ID=MsG0380015357.01;Name=MsG0380015357.01 |
| Chr3 | mRNA | 68967963 | 68970642 | 68967963 | ID=MsG0380015357.01.T01;Parent=MsG0380015357.01;Name=MsG0380015357.01.T01;_AED=0.33;_eAED=0.33;_QI=30|1|1|1|1|1|5|150|276 |
| Chr3 | exon | 68967963 | 68968096 | 68967963 | ID=MsG0380015357.01.T01:exon:13660;Parent=MsG0380015357.01.T01 |
| Chr3 | exon | 68968421 | 68968628 | 68968421 | ID=MsG0380015357.01.T01:exon:13661;Parent=MsG0380015357.01.T01 |
| Chr3 | exon | 68969386 | 68969602 | 68969386 | ID=MsG0380015357.01.T01:exon:13662;Parent=MsG0380015357.01.T01 |
| Chr3 | exon | 68969705 | 68969811 | 68969705 | ID=MsG0380015357.01.T01:exon:13663;Parent=MsG0380015357.01.T01 |
| Chr3 | exon | 68970298 | 68970642 | 68970298 | ID=MsG0380015357.01.T01:exon:13664;Parent=MsG0380015357.01.T01 |
| Chr3 | five_prime_UTR | 68967963 | 68967992 | 68967963 | ID=MsG0380015357.01.T01:five_prime_utr;Parent=MsG0380015357.01.T01 |
| Chr3 | CDS | 68967993 | 68968096 | 68967993 | ID=MsG0380015357.01.T01:cds;Parent=MsG0380015357.01.T01 |
| Chr3 | CDS | 68968421 | 68968628 | 68968421 | ID=MsG0380015357.01.T01:cds;Parent=MsG0380015357.01.T01 |
| Chr3 | CDS | 68969386 | 68969602 | 68969386 | ID=MsG0380015357.01.T01:cds;Parent=MsG0380015357.01.T01 |
| Chr3 | CDS | 68969705 | 68969811 | 68969705 | ID=MsG0380015357.01.T01:cds;Parent=MsG0380015357.01.T01 |
| Chr3 | CDS | 68970298 | 68970492 | 68970298 | ID=MsG0380015357.01.T01:cds;Parent=MsG0380015357.01.T01 |
| Chr3 | three_prime_UTR | 68970493 | 68970642 | 68970493 | ID=MsG0380015357.01.T01:three_prime_utr;Parent=MsG0380015357.01.T01 |
| Gene Sequence |
| Protein sequence |
