AlfalfaGEDB | MsG0580028987.01

M. sativa cultivar ZhongmuNo.1 / MsG0580028987.01

KEGG: K09874
GO: GO:0015267 GO:0016020 GO:0055085
PFAM: PF00230

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580028987.01.T01	AES99338.1	95.149	268	11	1	1	266	1	268	0	515

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580028987.01.T01	P49173	65.267	262	84	2	4	258	3	264	7.98E-123	353

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580028987.01.T01	G7KBN5	95.149	268	11	1	1	266	1	268	0.0	515

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0180003741.01	MsG0580028987.01	0.800591	1.341440e-48	6.270365e-46
MsG0580028987.01	MsG0580029310.01	0.821819	3.295780e-53	2.710418e-50
MsG0580028987.01	MsG0780041259.01	0.806161	9.408612e-50	5.070990e-47
MsG0580028987.01	MsG0880042958.01	0.831288	1.817119e-55	1.963015e-52
MsG0580028987.01	MsG0880042959.01	0.807045	6.123280e-50	3.375855e-47

PPI

Gene1	Gene2	Type
MsG0580024653.01	MsG0580028987.01	PPI
MsG0380011693.01	MsG0580028987.01	PPI
MsG0580028987.01	MsG0480019955.01	PPI
MsG0480018608.01	MsG0580028987.01	PPI
MsG0480020913.01	MsG0580028987.01	PPI
MsG0380015447.01	MsG0580028987.01	PPI
MsG0580029158.01	MsG0580028987.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580028987.01.T01	MTR_5g079570	95.149	268	11	1	1	266	1	268	0.0	515
MsG0580028987.01.T01	MTR_3g008920	73.361	244	63	1	17	258	5	248	1.29e-132	375
MsG0580028987.01.T01	MTR_4g084880	58.233	249	97	2	11	252	4	252	6.66e-107	311
MsG0580028987.01.T01	MTR_8g087720	54.425	226	102	1	28	252	28	253	2.83e-86	258
MsG0580028987.01.T01	MTR_2g017590	50.000	252	117	3	7	252	3	251	6.69e-86	257
MsG0580028987.01.T01	MTR_2g017610	52.301	239	105	3	20	252	18	253	1.03e-84	254
MsG0580028987.01.T01	MTR_2g017660	47.191	267	133	4	3	264	5	268	4.93e-84	253
MsG0580028987.01.T01	MTR_2g017570	51.883	239	106	3	20	252	18	253	6.08e-84	252
MsG0580028987.01.T01	MTR_2g017620	53.043	230	100	3	31	255	17	243	1.54e-82	248
MsG0580028987.01.T01	MTR_2g017620	53.043	230	100	3	31	255	31	257	2.01e-82	248
MsG0580028987.01.T01	MTR_8g087710	49.609	256	123	4	1	252	1	254	3.06e-82	248
MsG0580028987.01.T01	MTR_2g017620	54.494	178	80	1	81	257	1	178	1.53e-63	197
MsG0580028987.01.T01	MTR_7g010650	44.395	223	122	2	38	259	37	258	1.55e-62	198
MsG0580028987.01.T01	MTR_8g087720	53.448	174	80	1	28	200	28	201	7.59e-61	191
MsG0580028987.01.T01	MTR_4g006730	45.188	239	122	3	27	264	64	294	1.87e-59	191
MsG0580028987.01.T01	MTR_5g063930	39.216	255	141	5	12	261	16	261	4.39e-59	189
MsG0580028987.01.T01	MTR_2g104940	45.000	220	116	3	36	254	78	293	1.20e-56	184
MsG0580028987.01.T01	MTR_4g006630	45.581	215	108	3	51	264	1	207	9.74e-54	173
MsG0580028987.01.T01	MTR_4g006730	45.581	215	108	3	51	264	1	207	1.05e-53	173
MsG0580028987.01.T01	MTR_8g087720	54.902	153	68	1	29	180	29	181	1.28e-52	170
MsG0580028987.01.T01	MTR_1g097840	41.667	216	124	2	33	247	69	283	5.16e-51	169
MsG0580028987.01.T01	MTR_1g070385	36.744	215	134	2	34	247	58	271	1.15e-40	149
MsG0580028987.01.T01	MTR_4g006730	40.976	205	107	3	27	230	64	255	1.20e-37	133
MsG0580028987.01.T01	MTR_7g010650	42.759	145	81	2	38	181	37	180	1.55e-31	115
MsG0580028987.01.T01	MTR_1g097840	38.596	171	99	3	33	200	69	236	1.01e-30	115
MsG0580028987.01.T01	MTR_2g101370	36.797	231	120	8	33	246	15	236	1.09e-28	109
MsG0580028987.01.T01	MTR_1g077540	34.545	220	132	4	37	246	20	237	1.54e-27	107
MsG0580028987.01.T01	MTR_6g069040	33.898	236	144	4	37	260	20	255	4.50e-27	105
MsG0580028987.01.T01	MTR_1g006490	35.217	230	140	7	37	259	18	245	3.52e-26	103
MsG0580028987.01.T01	MTR_1g006590	37.391	230	133	8	37	258	18	244	6.19e-26	102
MsG0580028987.01.T01	MTR_8g013680	33.913	230	134	7	37	252	18	243	5.41e-25	100
MsG0580028987.01.T01	MTR_5g012810	34.259	216	131	5	37	243	18	231	1.04e-23	96.7
MsG0580028987.01.T01	MTR_2g094270	34.921	189	109	5	71	246	84	271	6.45e-23	95.5
MsG0580028987.01.T01	MTR_7g103030	32.579	221	134	5	37	246	20	236	4.16e-22	92.4
MsG0580028987.01.T01	MTR_5g082070	27.715	267	163	6	2	241	12	275	5.19e-22	92.8
MsG0580028987.01.T01	MTR_1g115405	33.333	219	132	3	37	244	20	235	7.15e-22	91.7
MsG0580028987.01.T01	MTR_4g006650	43.448	145	65	4	39	179	5	136	1.00e-21	92.8
MsG0580028987.01.T01	MTR_4g063090	33.484	221	117	7	43	244	26	235	2.81e-21	90.1
MsG0580028987.01.T01	MTR_7g101190	29.808	208	124	5	71	262	82	283	1.79e-20	88.6
MsG0580028987.01.T01	MTR_4g059390	31.771	192	111	5	71	246	82	269	6.09e-20	87.4
MsG0580028987.01.T01	MTR_7g023350	31.963	219	135	3	37	244	20	235	1.14e-19	85.9
MsG0580028987.01.T01	MTR_3g118010	29.694	229	143	6	35	246	34	261	2.39e-19	85.5
MsG0580028987.01.T01	MTR_5g010150	29.688	192	122	4	66	244	84	275	2.88e-19	85.5
MsG0580028987.01.T01	MTR_3g070210	26.877	253	160	6	9	241	28	275	7.87e-19	84.3
MsG0580028987.01.T01	MTR_1g095070	29.500	200	119	5	79	262	24	217	8.03e-18	80.1
MsG0580028987.01.T01	MTR_8g098375	28.125	192	125	3	66	244	84	275	9.53e-18	81.3
MsG0580028987.01.T01	MTR_2g094270	32.381	210	120	7	35	223	37	245	1.02e-16	78.2
MsG0580028987.01.T01	MTR_2g060360	29.694	229	149	6	37	257	18	242	2.47e-16	76.6
MsG0580028987.01.T01	MTR_4g415300	28.017	232	152	6	37	254	59	289	3.78e-16	76.6
MsG0580028987.01.T01	MTR_3g070210	25.764	229	148	5	9	220	28	251	1.94e-14	72.0
MsG0580028987.01.T01	MTR_1g095070	30.065	153	90	3	79	218	24	172	5.39e-13	66.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580028987.01.T01	AT5G37820	58.915	258	100	2	1	252	1	258	6.62e-110	319
MsG0580028987.01.T01	AT5G37820	58.915	258	100	2	1	252	37	294	1.19e-109	319
MsG0580028987.01.T01	AT5G37810	56.977	258	105	2	1	252	1	258	4.72e-106	309
MsG0580028987.01.T01	AT4G18910	53.947	228	97	3	33	252	47	274	2.50e-83	251
MsG0580028987.01.T01	AT4G19030	47.126	261	128	5	1	252	18	277	3.96e-78	238
MsG0580028987.01.T01	AT1G31885	51.770	226	101	3	33	250	38	263	7.05e-77	236
MsG0580028987.01.T01	AT1G31885	53.110	209	90	3	50	250	1	209	8.70e-71	219
MsG0580028987.01.T01	AT2G34390	44.068	236	119	4	33	260	43	273	9.96e-67	209
MsG0580028987.01.T01	AT2G34390	43.966	232	117	4	39	262	7	233	8.81e-65	202
MsG0580028987.01.T01	AT4G18910	52.273	176	76	3	33	200	47	222	1.04e-57	184
MsG0580028987.01.T01	AT4G19030	44.498	209	106	5	1	200	18	225	2.30e-54	175
MsG0580028987.01.T01	AT1G80760	39.764	254	145	5	11	262	54	301	1.14e-53	176
MsG0580028987.01.T01	AT4G10380	42.453	212	120	2	34	244	74	284	2.54e-49	165
MsG0580028987.01.T01	AT4G19030	43.750	192	98	5	1	183	18	208	1.13e-46	155
MsG0580028987.01.T01	AT2G34390	41.477	176	94	3	33	200	43	217	8.23e-44	148
MsG0580028987.01.T01	AT3G06100	33.852	257	157	6	3	250	4	256	3.04e-41	143
MsG0580028987.01.T01	AT2G34390	41.772	158	83	3	33	182	43	199	3.33e-39	136
MsG0580028987.01.T01	AT3G06100	36.792	212	128	4	41	250	1	208	1.55e-38	135
MsG0580028987.01.T01	AT1G17810	33.613	238	143	5	37	259	23	260	2.84e-28	109
MsG0580028987.01.T01	AT1G73190	34.348	230	124	7	37	246	23	245	1.86e-26	104
MsG0580028987.01.T01	AT3G16240	34.855	241	140	9	33	260	14	250	3.19e-26	103
MsG0580028987.01.T01	AT5G47450	32.301	226	133	6	33	244	14	233	7.58e-26	102
MsG0580028987.01.T01	AT2G29870	46.729	107	53	1	154	260	22	124	1.18e-25	99.0
MsG0580028987.01.T01	AT2G25810	32.018	228	149	4	37	259	18	244	1.81e-24	98.6
MsG0580028987.01.T01	AT1G31885	45.882	85	45	1	33	116	38	122	3.27e-24	95.1
MsG0580028987.01.T01	AT4G01470	33.921	227	120	7	37	244	20	235	6.83e-24	97.4
MsG0580028987.01.T01	AT3G26520	33.184	223	131	6	37	246	21	238	1.17e-23	96.7
MsG0580028987.01.T01	AT4G17340	30.909	220	144	3	33	244	14	233	3.04e-23	95.5
MsG0580028987.01.T01	AT2G16850	30.612	245	150	7	35	262	33	274	2.78e-21	90.9
MsG0580028987.01.T01	AT1G01620	29.870	231	149	5	37	254	55	285	6.68e-21	90.1
MsG0580028987.01.T01	AT3G53420	28.058	278	174	8	1	253	1	277	9.11e-21	89.7
MsG0580028987.01.T01	AT3G53420	28.058	278	174	8	1	253	1	277	9.11e-21	89.7
MsG0580028987.01.T01	AT3G06100	36.691	139	83	3	113	250	41	175	1.15e-20	87.4
MsG0580028987.01.T01	AT4G00430	29.437	231	150	5	37	254	56	286	1.62e-20	89.0
MsG0580028987.01.T01	AT1G01620	31.188	202	126	5	66	254	12	213	2.86e-20	86.7
MsG0580028987.01.T01	AT2G37170	29.268	246	143	6	35	253	34	275	5.88e-20	87.4
MsG0580028987.01.T01	AT4G23400	28.571	231	152	4	37	254	56	286	7.48e-20	87.0
MsG0580028987.01.T01	AT2G37170	29.268	246	143	6	35	253	77	318	1.12e-19	87.0
MsG0580028987.01.T01	AT2G36830	33.790	219	131	6	37	244	20	235	1.38e-19	85.5
MsG0580028987.01.T01	AT2G37180	29.339	242	148	5	35	253	34	275	1.75e-19	85.9
MsG0580028987.01.T01	AT5G60660	30.342	234	139	7	36	246	37	269	2.06e-19	85.9
MsG0580028987.01.T01	AT4G35100	29.237	236	141	7	32	246	32	262	3.34e-19	85.1
MsG0580028987.01.T01	AT4G35100	29.237	236	141	7	32	246	32	262	3.34e-19	85.1
MsG0580028987.01.T01	AT2G39010	26.471	272	164	6	5	246	3	268	5.66e-19	84.7
MsG0580028987.01.T01	AT3G61430	29.493	217	141	4	37	241	55	271	8.63e-19	84.0
MsG0580028987.01.T01	AT3G61430	29.493	217	141	4	37	241	55	271	8.63e-19	84.0
MsG0580028987.01.T01	AT3G47440	31.140	228	132	7	33	244	18	236	1.62e-18	82.8
MsG0580028987.01.T01	AT3G54820	29.167	192	116	4	71	246	81	268	2.85e-18	82.8
MsG0580028987.01.T01	AT2G45960	28.571	217	143	4	37	241	55	271	8.48e-18	81.3
MsG0580028987.01.T01	AT2G45960	28.796	191	127	3	37	218	55	245	9.85e-14	70.1
MsG0580028987.01.T01	AT2G45960	29.534	193	123	4	41	220	55	247	9.96e-14	69.7

Find 64 sgRNAs with CRISPR-Local

Find 129 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATCACATCCAAAACTTATTT+TGG	0.107517	5:+89954097	MsG0580028987.01.T01:CDS
TAATTCTGAAGGTGACTTTA+TGG	0.194906	5:-89954830	None:intergenic
AACGGTTCCAAAATAAGTTT+TGG	0.262047	5:-89954104	None:intergenic
TATGGCTCTGTAACATTTCC+AGG	0.285416	5:+89953725	MsG0580028987.01.T01:CDS
TACTCTGTTGGTCATGTCTC+TGG	0.343607	5:+89953788	MsG0580028987.01.T01:CDS
TACATGTTTACAAAGGGTTA+TGG	0.349931	5:+89954743	MsG0580028987.01.T01:CDS
TTCATAGATCCTCCTGATAC+AGG	0.402531	5:-89954688	None:intergenic
AATTAGCAGATGAACAATTC+AGG	0.402602	5:+89954848	MsG0580028987.01.T01:CDS
ACCGTTCCCGTTGGATCAAA+TGG	0.412321	5:+89954121	MsG0580028987.01.T01:CDS
ATGTTGAATGTCTTCATTGC+TGG	0.417160	5:+89954543	MsG0580028987.01.T01:CDS
GCAGGACCGATACTTCTTGC+TGG	0.422855	5:-89954712	None:intergenic
GTAGCGGTGGATAAGATCTA+TGG	0.440961	5:+89953707	MsG0580028987.01.T01:CDS
CCAATTGTTGGAGCTATAGT+TGG	0.441610	5:+89954781	MsG0580028987.01.T01:CDS
CAATTCAGGAACATTGTTGT+AGG	0.443646	5:+89954862	MsG0580028987.01.T01:CDS
TCCAGGGGTATGTATCACTT+GGG	0.444080	5:+89953742	MsG0580028987.01.T01:CDS
CCAACTATAGCTCCAACAAT+TGG	0.445205	5:-89954781	None:intergenic
GACTGGCCATTTGATCCAAC+GGG	0.452555	5:-89954127	None:intergenic
TATGTGGTTGGTCCAATTGT+TGG	0.463091	5:+89954769	MsG0580028987.01.T01:CDS
CTAACTTACCTTCTGTATCA+AGG	0.467222	5:-89952828	None:intergenic
AAAATAAGTACCTCTTTAAG+TGG	0.467838	5:-89953863	None:intergenic
TTTGTGGTGTTTGCTGGATG+TGG	0.469996	5:+89953680	MsG0580028987.01.T01:CDS
TTCCAGGGGTATGTATCACT+TGG	0.477471	5:+89953741	MsG0580028987.01.T01:CDS
CAAAGGGTTATGGATATATG+TGG	0.478406	5:+89954753	MsG0580028987.01.T01:CDS
GATTTCGCCGGTGTTGCCAT+TGG	0.478845	5:+89954510	MsG0580028987.01.T01:CDS
TCGTAGGACCCCACTTAAAG+AGG	0.492077	5:+89953853	MsG0580028987.01.T01:CDS
GAAATTTCAAGTGTTGAAGA+AGG	0.496374	5:+89952758	MsG0580028987.01.T01:CDS
ACCCTGCTGTTACCATCACT+TGG	0.498343	5:+89953822	MsG0580028987.01.T01:CDS
ATGGTCATGTCTTACTCTGT+TGG	0.501610	5:+89953776	MsG0580028987.01.T01:CDS
GTCCAAGTGATGGTAACAGC+AGG	0.513012	5:-89953824	None:intergenic
CCAGGGGTATGTATCACTTG+GGG	0.515908	5:+89953743	MsG0580028987.01.T01:CDS
CAGGACCGATACTTCTTGCT+GGG	0.516191	5:-89954711	None:intergenic
AAGTGGGGTCCTACGAAAGA+TGG	0.521239	5:-89953846	None:intergenic
TAGGTGATTGCAGAAATCAT+TGG	0.529080	5:+89953650	MsG0580028987.01.T01:intron
TTATAGTACATGTTTACAAA+GGG	0.532743	5:+89954737	MsG0580028987.01.T01:CDS
TGTTCATCTGCTAATTCTGA+AGG	0.537888	5:-89954841	None:intergenic
CTTATAGTACATGTTTACAA+AGG	0.540276	5:+89954736	MsG0580028987.01.T01:CDS
TGTTGAATGTCTTCATTGCT+GGG	0.543020	5:+89954544	MsG0580028987.01.T01:CDS
AAATAAGTACCTCTTTAAGT+GGG	0.550356	5:-89953862	None:intergenic
GCCATTTGATCCAACGGGAA+CGG	0.550503	5:-89954122	None:intergenic
CAGGGGTATGTATCACTTGG+GGG	0.558009	5:+89953744	MsG0580028987.01.T01:CDS
CTTAATGTTTGTCATTTCAG+CGG	0.564296	5:+89954180	MsG0580028987.01.T01:CDS
AGTCATTCCAATGGCAACAC+CGG	0.575335	5:-89954517	None:intergenic
TAAACATGTACTATAAGTGC+AGG	0.575709	5:-89954730	None:intergenic
TGATTTCAGCAACTAAAGAC+TGG	0.582710	5:-89954144	None:intergenic
AGACTGGCCATTTGATCCAA+CGG	0.587258	5:-89954128	None:intergenic
ATGGCTCTGTAACATTTCCA+GGG	0.587736	5:+89953726	MsG0580028987.01.T01:CDS
CAACATTATAGTCATTCCAA+TGG	0.589547	5:-89954526	None:intergenic
ATGAACCCAGCAAGAAGTAT+CGG	0.591729	5:+89954706	MsG0580028987.01.T01:CDS
ACGAAAGATGGTCCAAGTGA+TGG	0.593945	5:-89953834	None:intergenic
AACAAAGTTGCATGACGTGA+GGG	0.603296	5:-89952784	None:intergenic
TCTGTTGGTCATGTCTCTGG+AGG	0.613813	5:+89953791	MsG0580028987.01.T01:CDS
TACGATAACCTTGATACAGA+AGG	0.613840	5:+89952820	MsG0580028987.01.T01:CDS
TGCTGGATGTGGTTCTGTAG+CGG	0.615636	5:+89953691	MsG0580028987.01.T01:CDS
CAACAAAGTTGCATGACGTG+AGG	0.616602	5:-89952785	None:intergenic
CCCCAAGTGATACATACCCC+TGG	0.616740	5:-89953743	None:intergenic
GGGTTATGGATATATGTGGT+TGG	0.617165	5:+89954757	MsG0580028987.01.T01:CDS
GTAGGATCAACGCTTGCAAG+TGG	0.619145	5:+89954052	MsG0580028987.01.T01:CDS
TCACTTGGACCATCTTTCGT+AGG	0.622666	5:+89953837	MsG0580028987.01.T01:CDS
GGTTTCAACTGACGAAAGAG+CGG	0.639622	5:+89954201	MsG0580028987.01.T01:CDS
TGGCAGGTGAATGATTTCGC+CGG	0.641490	5:+89954498	MsG0580028987.01.T01:intron
TCCAAGTGATGGTAACAGCA+GGG	0.661110	5:-89953823	None:intergenic
AATAAGTACCTCTTTAAGTG+GGG	0.663262	5:-89953861	None:intergenic
TGGCTCTGTAACATTTCCAG+GGG	0.710110	5:+89953727	MsG0580028987.01.T01:CDS
TGGATGTGGTTCTGTAGCGG+TGG	0.720221	5:+89953694	MsG0580028987.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TATTAGTTTTTTTTCTTTTT+CGG	+	Chr5:89953076-89953095	MsG0580028987.01.T01:intron	10.0%
!!!	AAAAAAATGGTGTTTATTTT+AGG	+	Chr5:89953114-89953133	MsG0580028987.01.T01:intron	15.0%
!!!	AAAAAATGGTGTTTATTTTA+GGG	+	Chr5:89953115-89953134	MsG0580028987.01.T01:intron	15.0%
!!!	TAAAATAAACACCATTTTTT+TGG	-	Chr5:89953115-89953134	None:intergenic	15.0%
!!	ACAATGAAAAATTACTAATG+TGG	+	Chr5:89952899-89952918	MsG0580028987.01.T01:intron	20.0%
!!	ATTTGGTAAAAAAACATAAG+AGG	-	Chr5:89953279-89953298	None:intergenic	20.0%
!!	TAAATCTATATTTGGTATCA+TGG	+	Chr5:89953309-89953328	MsG0580028987.01.T01:intron	20.0%
!!	TCTTGATTTAGATAAGAAAA+AGG	+	Chr5:89953249-89953268	MsG0580028987.01.T01:intron	20.0%
!!	TTAAAATGAATGATATGAAG+TGG	-	Chr5:89954322-89954341	None:intergenic	20.0%
!!	TTATAGTACATGTTTACAAA+GGG	+	Chr5:89954737-89954756	MsG0580028987.01.T01:CDS	20.0%
!!	TTTGGTAAAAAAACATAAGA+GGG	-	Chr5:89953278-89953297	None:intergenic	20.0%
!!!	ACTGAATTTAAATTTTTTGC+AGG	+	Chr5:89954665-89954684	MsG0580028987.01.T01:intron	20.0%
!!!	GTCATAAAAGATTCTAAAAA+TGG	-	Chr5:89953229-89953248	None:intergenic	20.0%
!!!	TTAAATGTATGTTTTATGGA+TGG	+	Chr5:89952981-89953000	MsG0580028987.01.T01:intron	20.0%
!	AAAAATTACTAATGTGGAGA+CGG	+	Chr5:89952905-89952924	MsG0580028987.01.T01:intron	25.0%
!	AAAATAAGTACCTCTTTAAG+TGG	-	Chr5:89953866-89953885	None:intergenic	25.0%
!	AAATAAGTACCTCTTTAAGT+GGG	-	Chr5:89953865-89953884	None:intergenic	25.0%
!	ATCAAAAGAACATCGTTATT+AGG	-	Chr5:89953172-89953191	None:intergenic	25.0%
!	CGTAAATATCTACACATTAA+GGG	+	Chr5:89954232-89954251	MsG0580028987.01.T01:intron	25.0%
!	CTTATAGTACATGTTTACAA+AGG	+	Chr5:89954736-89954755	MsG0580028987.01.T01:CDS	25.0%
!	GTAAATATCTACACATTAAG+GGG	+	Chr5:89954233-89954252	MsG0580028987.01.T01:intron	25.0%
!	TAATTCTCTTCGTAAATGAT+CGG	-	Chr5:89952948-89952967	None:intergenic	25.0%
!	TCGTAAATATCTACACATTA+AGG	+	Chr5:89954231-89954250	MsG0580028987.01.T01:intron	25.0%
!	TCTCTCGTTAAATCTATATT+TGG	+	Chr5:89953301-89953320	MsG0580028987.01.T01:intron	25.0%
!	TTGGTAAAAAAACATAAGAG+GGG	-	Chr5:89953277-89953296	None:intergenic	25.0%
!!	AATCATTGGAACATATTTTG+TGG	+	Chr5:89953664-89953683	MsG0580028987.01.T01:CDS	25.0%
!!	ATCACATCCAAAACTTATTT+TGG	+	Chr5:89954097-89954116	MsG0580028987.01.T01:CDS	25.0%
!!!	CGCTTTAAATGTATGTTTTA+TGG	+	Chr5:89952977-89952996	MsG0580028987.01.T01:intron	25.0%
!!!	TTTTGATGAAGGGTTTTAAA+TGG	+	Chr5:89953185-89953204	MsG0580028987.01.T01:intron	25.0%
	AATAAGTACCTCTTTAAGTG+GGG	-	Chr5:89953864-89953883	None:intergenic	30.0%
	AATGAGAGATTTAGCATGTT+TGG	-	Chr5:89953434-89953453	None:intergenic	30.0%
	AATTAGCAGATGAACAATTC+AGG	+	Chr5:89954848-89954867	MsG0580028987.01.T01:CDS	30.0%
	AGATTTAACGAGAGAGAATT+TGG	-	Chr5:89953296-89953315	None:intergenic	30.0%
	CAACATTATAGTCATTCCAA+TGG	-	Chr5:89954529-89954548	None:intergenic	30.0%
	CATATGTTTCTTGTACATGT+AGG	+	Chr5:89954003-89954022	MsG0580028987.01.T01:intron	30.0%
	CTACATGTACAAGAAACATA+TGG	-	Chr5:89954005-89954024	None:intergenic	30.0%
	GTAAGTTAGTGTGTCTTAAT+TGG	+	Chr5:89952842-89952861	MsG0580028987.01.T01:intron	30.0%
	TAAACATGTACTATAAGTGC+AGG	-	Chr5:89954733-89954752	None:intergenic	30.0%
	TAATCTTGTGGAAAATGACA+TGG	-	Chr5:89953521-89953540	None:intergenic	30.0%
	TACATGTTTACAAAGGGTTA+TGG	+	Chr5:89954743-89954762	MsG0580028987.01.T01:CDS	30.0%
	TCTTAGACTTCGAAATTTGA+CGG	+	Chr5:89953010-89953029	MsG0580028987.01.T01:intron	30.0%
	TGGTGTGTAAGTTAGAATTA+TGG	+	Chr5:89953329-89953348	MsG0580028987.01.T01:intron	30.0%
	TTTGTTAACACGATTCTGAT+AGG	+	Chr5:89954459-89954478	MsG0580028987.01.T01:intron	30.0%
!	AACGATGTTCTTTTGATGAA+GGG	+	Chr5:89953175-89953194	MsG0580028987.01.T01:intron	30.0%
!	AACGGTTCCAAAATAAGTTT+TGG	-	Chr5:89954107-89954126	None:intergenic	30.0%
!	ACTATACATTTTTGCTCAGT+TGG	+	Chr5:89954030-89954049	MsG0580028987.01.T01:CDS	30.0%
!	ATGTGTGTTGTTACTCTTAA+GGG	-	Chr5:89953546-89953565	None:intergenic	30.0%
!	ATTTTCTCTTGATTGTCACT+AGG	+	Chr5:89953631-89953650	MsG0580028987.01.T01:intron	30.0%
!	CTTAATGTTTGTCATTTCAG+CGG	+	Chr5:89954180-89954199	MsG0580028987.01.T01:CDS	30.0%
!	TAACGATGTTCTTTTGATGA+AGG	+	Chr5:89953174-89953193	MsG0580028987.01.T01:intron	30.0%
!	TAATTCTGAAGGTGACTTTA+TGG	-	Chr5:89954833-89954852	None:intergenic	30.0%
!	TAGGCATTTGCTTAATTTGA+TGG	+	Chr5:89954478-89954497	MsG0580028987.01.T01:intron	30.0%
!!	GAAATTTCAAGTGTTGAAGA+AGG	+	Chr5:89952758-89952777	MsG0580028987.01.T01:CDS	30.0%
!!!	AAACACCATTTTTTTGGTGT+TGG	-	Chr5:89953109-89953128	None:intergenic	30.0%
!!!	GAAGGGTTTTAAATGGTTTT+TGG	+	Chr5:89953192-89953211	MsG0580028987.01.T01:intron	30.0%
!!!	GGTGTTTATTTTAGGGTTTT+GGG	+	Chr5:89953122-89953141	MsG0580028987.01.T01:intron	30.0%
!!!	TGGTGTTTATTTTAGGGTTT+TGG	+	Chr5:89953121-89953140	MsG0580028987.01.T01:intron	30.0%
	AGTAACAACACACATGAATC+TGG	+	Chr5:89953551-89953570	MsG0580028987.01.T01:intron	35.0%
	ATGTTGAATGTCTTCATTGC+TGG	+	Chr5:89954543-89954562	MsG0580028987.01.T01:CDS	35.0%
	CAAAGGGTTATGGATATATG+TGG	+	Chr5:89954753-89954772	MsG0580028987.01.T01:CDS	35.0%
	CAATTCAGGAACATTGTTGT+AGG	+	Chr5:89954862-89954881	MsG0580028987.01.T01:CDS	35.0%
	CTAACTTACCTTCTGTATCA+AGG	-	Chr5:89952831-89952850	None:intergenic	35.0%
	CTATGTATCCAACATGTTGT+AGG	-	Chr5:89953492-89953511	None:intergenic	35.0%
	CTCATTCAAACATATCCAAG+TGG	+	Chr5:89953448-89953467	MsG0580028987.01.T01:intron	35.0%
	CTCTTAAGGGTTTAATCTTG+TGG	-	Chr5:89953533-89953552	None:intergenic	35.0%
	GAACTTTCATTTGTTCCACT+TGG	-	Chr5:89953466-89953485	None:intergenic	35.0%
	TACGATAACCTTGATACAGA+AGG	+	Chr5:89952820-89952839	MsG0580028987.01.T01:CDS	35.0%
	TAGGTGATTGCAGAAATCAT+TGG	+	Chr5:89953650-89953669	MsG0580028987.01.T01:intron	35.0%
	TGATTTCAGCAACTAAAGAC+TGG	-	Chr5:89954147-89954166	None:intergenic	35.0%
	TGTTCATCTGCTAATTCTGA+AGG	-	Chr5:89954844-89954863	None:intergenic	35.0%
	TGTTGAATGTCTTCATTGCT+GGG	+	Chr5:89954544-89954563	MsG0580028987.01.T01:CDS	35.0%
	TTAAGTACAAGAGAATGCTC+TGG	+	Chr5:89954345-89954364	MsG0580028987.01.T01:intron	35.0%
!	ACATATTTTGTGGTGTTTGC+TGG	+	Chr5:89953674-89953693	MsG0580028987.01.T01:CDS	35.0%
!	ATTAAGGGGTATATGCTTGT+CGG	+	Chr5:89954247-89954266	MsG0580028987.01.T01:intron	35.0%
!	CATGTGTGTTGTTACTCTTA+AGG	-	Chr5:89953547-89953566	None:intergenic	35.0%
!	CATTTGCTTAATTTGATGGC+AGG	+	Chr5:89954482-89954501	MsG0580028987.01.T01:intron	35.0%
!	TACATTTTTGCTCAGTTGGT+AGG	+	Chr5:89954034-89954053	MsG0580028987.01.T01:CDS	35.0%
!!!	ACCATTTTTTTGGTGTTGGT+CGG	-	Chr5:89953105-89953124	None:intergenic	35.0%
	AACAAAGTTGCATGACGTGA+GGG	-	Chr5:89952787-89952806	None:intergenic	40.0%
	ATGGTCATGTCTTACTCTGT+TGG	+	Chr5:89953776-89953795	MsG0580028987.01.T01:CDS	40.0%
	CAAACCATATGTCACTCTCA+TGG	-	Chr5:89954631-89954650	None:intergenic	40.0%
	CCAACTATAGCTCCAACAAT+TGG	-	Chr5:89954784-89954803	None:intergenic	40.0%
	CCAATTGTTGGAGCTATAGT+TGG	+	Chr5:89954781-89954800	MsG0580028987.01.T01:CDS	40.0%
	GGGTTATGGATATATGTGGT+TGG	+	Chr5:89954757-89954776	MsG0580028987.01.T01:CDS	40.0%
	TCCGACCAACACCAAAAAAA+TGG	+	Chr5:89953101-89953120	MsG0580028987.01.T01:intron	40.0%
	TTCATAGATCCTCCTGATAC+AGG	-	Chr5:89954691-89954710	None:intergenic	40.0%
!	ATGAACCCAGCAAGAAGTAT+CGG	+	Chr5:89954706-89954725	MsG0580028987.01.T01:CDS	40.0%
!	ATGGCTCTGTAACATTTCCA+GGG	+	Chr5:89953726-89953745	MsG0580028987.01.T01:CDS	40.0%
!	TATGGCTCTGTAACATTTCC+AGG	+	Chr5:89953725-89953744	MsG0580028987.01.T01:CDS	40.0%
!	TATGTGGTTGGTCCAATTGT+TGG	+	Chr5:89954769-89954788	MsG0580028987.01.T01:CDS	40.0%
!!!	ATTTTTTGCAGGCCTGTATC+AGG	+	Chr5:89954676-89954695	MsG0580028987.01.T01:intron	40.0%
!!!	GGGTTTTGGGTATATGATGT+TGG	+	Chr5:89953135-89953154	MsG0580028987.01.T01:intron	40.0%
	ACGAAAGATGGTCCAAGTGA+TGG	-	Chr5:89953837-89953856	None:intergenic	45.0%
	AGTCATTCCAATGGCAACAC+CGG	-	Chr5:89954520-89954539	None:intergenic	45.0%
	AGTTCGTGCCTACAACATGT+TGG	+	Chr5:89953481-89953500	MsG0580028987.01.T01:intron	45.0%
	CAACAAAGTTGCATGACGTG+AGG	-	Chr5:89952788-89952807	None:intergenic	45.0%
	CACTTGGGGGCTTATTGTAA+TGG	+	Chr5:89953757-89953776	MsG0580028987.01.T01:CDS	45.0%
	CTCTCCATGAGAGTGACATA+TGG	+	Chr5:89954624-89954643	MsG0580028987.01.T01:intron	45.0%
	GGTTTCAACTGACGAAAGAG+CGG	+	Chr5:89954201-89954220	MsG0580028987.01.T01:CDS	45.0%
	GTAGCGGTGGATAAGATCTA+TGG	+	Chr5:89953707-89953726	MsG0580028987.01.T01:CDS	45.0%
	TACTCTGTTGGTCATGTCTC+TGG	+	Chr5:89953788-89953807	MsG0580028987.01.T01:CDS	45.0%
	TCACTTGGACCATCTTTCGT+AGG	+	Chr5:89953837-89953856	MsG0580028987.01.T01:CDS	45.0%
	TCCAAGTGATGGTAACAGCA+GGG	-	Chr5:89953826-89953845	None:intergenic	45.0%
!	AGACTGGCCATTTGATCCAA+CGG	-	Chr5:89954131-89954150	None:intergenic	45.0%
!	TCCAGGGGTATGTATCACTT+GGG	+	Chr5:89953742-89953761	MsG0580028987.01.T01:CDS	45.0%
!	TGGCTCTGTAACATTTCCAG+GGG	+	Chr5:89953727-89953746	MsG0580028987.01.T01:CDS	45.0%
!	TTCCAGGGGTATGTATCACT+TGG	+	Chr5:89953741-89953760	MsG0580028987.01.T01:CDS	45.0%
!	TTTGTGGTGTTTGCTGGATG+TGG	+	Chr5:89953680-89953699	MsG0580028987.01.T01:CDS	45.0%
!!!	TATTTTGGAACCGTTCCCGT+TGG	+	Chr5:89954112-89954131	MsG0580028987.01.T01:CDS	45.0%
	AAGTGGGGTCCTACGAAAGA+TGG	-	Chr5:89953849-89953868	None:intergenic	50.0%
	ACCCTGCTGTTACCATCACT+TGG	+	Chr5:89953822-89953841	MsG0580028987.01.T01:CDS	50.0%
	ACCGTTCCCGTTGGATCAAA+TGG	+	Chr5:89954121-89954140	MsG0580028987.01.T01:CDS	50.0%
	CAGGACCGATACTTCTTGCT+GGG	-	Chr5:89954714-89954733	None:intergenic	50.0%
	GCCATTTGATCCAACGGGAA+CGG	-	Chr5:89954125-89954144	None:intergenic	50.0%
	GTAGGATCAACGCTTGCAAG+TGG	+	Chr5:89954052-89954071	MsG0580028987.01.T01:CDS	50.0%
	GTCCAAGTGATGGTAACAGC+AGG	-	Chr5:89953827-89953846	None:intergenic	50.0%
	TCGTAGGACCCCACTTAAAG+AGG	+	Chr5:89953853-89953872	MsG0580028987.01.T01:CDS	50.0%
	TCTGTTGGTCATGTCTCTGG+AGG	+	Chr5:89953791-89953810	MsG0580028987.01.T01:CDS	50.0%
	TGGCAGGTGAATGATTTCGC+CGG	+	Chr5:89954498-89954517	MsG0580028987.01.T01:intron	50.0%
!	CAGGGGTATGTATCACTTGG+GGG	+	Chr5:89953744-89953763	MsG0580028987.01.T01:CDS	50.0%
!	CCAGGGGTATGTATCACTTG+GGG	+	Chr5:89953743-89953762	MsG0580028987.01.T01:CDS	50.0%
!	GACTGGCCATTTGATCCAAC+GGG	-	Chr5:89954130-89954149	None:intergenic	50.0%
!	TGCTGGATGTGGTTCTGTAG+CGG	+	Chr5:89953691-89953710	MsG0580028987.01.T01:CDS	50.0%
!	TTTTGCAGGCCTGTATCAGG+AGG	+	Chr5:89954679-89954698	MsG0580028987.01.T01:intron	50.0%
	CCCCAAGTGATACATACCCC+TGG	-	Chr5:89953746-89953765	None:intergenic	55.0%
	GCAGGACCGATACTTCTTGC+TGG	-	Chr5:89954715-89954734	None:intergenic	55.0%
	GGAGACGGTGCTCTGATTGA+AGG	+	Chr5:89952920-89952939	MsG0580028987.01.T01:intron	55.0%
!	TGGATGTGGTTCTGTAGCGG+TGG	+	Chr5:89953694-89953713	MsG0580028987.01.T01:CDS	55.0%
!!	GATTTCGCCGGTGTTGCCAT+TGG	+	Chr5:89954510-89954529	MsG0580028987.01.T01:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	89952725	89954888	89952725	ID=MsG0580028987.01;Name=MsG0580028987.01
Chr5	mRNA	89952725	89954888	89952725	ID=MsG0580028987.01.T01;Parent=MsG0580028987.01;Name=MsG0580028987.01.T01;_AED=0.44;_eAED=0.45;_QI=0\|0\|0\|1\|1\|1\|5\|0\|266
Chr5	exon	89952725	89952841	89952725	ID=MsG0580028987.01.T01:exon:17549;Parent=MsG0580028987.01.T01
Chr5	exon	89953653	89953874	89953653	ID=MsG0580028987.01.T01:exon:17550;Parent=MsG0580028987.01.T01
Chr5	exon	89954025	89954222	89954025	ID=MsG0580028987.01.T01:exon:17551;Parent=MsG0580028987.01.T01
Chr5	exon	89954504	89954565	89954504	ID=MsG0580028987.01.T01:exon:17552;Parent=MsG0580028987.01.T01
Chr5	exon	89954687	89954888	89954687	ID=MsG0580028987.01.T01:exon:17553;Parent=MsG0580028987.01.T01
Chr5	CDS	89952725	89952841	89952725	ID=MsG0580028987.01.T01:cds;Parent=MsG0580028987.01.T01
Chr5	CDS	89953653	89953874	89953653	ID=MsG0580028987.01.T01:cds;Parent=MsG0580028987.01.T01
Chr5	CDS	89954025	89954222	89954025	ID=MsG0580028987.01.T01:cds;Parent=MsG0580028987.01.T01
Chr5	CDS	89954504	89954565	89954504	ID=MsG0580028987.01.T01:cds;Parent=MsG0580028987.01.T01
Chr5	CDS	89954687	89954888	89954687	ID=MsG0580028987.01.T01:cds;Parent=MsG0580028987.01.T01

Gene Sequence

>MsG0580028987.01.T01

ATGGCTAACAAACGTGAAGACATTCATGACGATGAAATTTCAAGTGTTGAAGAAGGAAACCCTCACGTCATGCAACTTTGTTGTTCATCAAACAATACGATAACCTTGATACAGAAGGTGATTGCAGAAATCATTGGAACATATTTTGTGGTGTTTGCTGGATGTGGTTCTGTAGCGGTGGATAAGATCTATGGCTCTGTAACATTTCCAGGGGTATGTATCACTTGGGGGCTTATTGTAATGGTCATGTCTTACTCTGTTGGTCATGTCTCTGGAGGACACTTCAACCCTGCTGTTACCATCACTTGGACCATCTTTCGTAGGACCCCACTTAAAGAGGCTTCACTATACATTTTTGCTCAGTTGGTAGGATCAACGCTTGCAAGTGGAACATTAACTCTAATGTTTGATATCACATCCAAAACTTATTTTGGAACCGTTCCCGTTGGATCAAATGGCCAGTCTTTAGTTGCTGAAATCATTATCAGTTTTCTCTTAATGTTTGTCATTTCAGCGGTTTCAACTGACGAAAGAGCGGTGAATGATTTCGCCGGTGTTGCCATTGGAATGACTATAATGTTGAATGTCTTCATTGCTGGGCCTGTATCAGGAGGATCTATGAACCCAGCAAGAAGTATCGGTCCTGCACTTATAGTACATGTTTACAAAGGGTTATGGATATATGTGGTTGGTCCAATTGTTGGAGCTATAGTTGGAGCAATTGCATATAACTTTCTTAGATCCATAAAGTCACCTTCAGAATTAGCAGATGAACAATTCAGGAACATTGTTGTAGGTTGA

Protein sequence

>MsG0580028987.01.T01

MANKREDIHDDEISSVEEGNPHVMQLCCSSNNTITLIQKVIAEIIGTYFVVFAGCGSVAVDKIYGSVTFPGVCITWGLIVMVMSYSVGHVSGGHFNPAVTITWTIFRRTPLKEASLYIFAQLVGSTLASGTLTLMFDITSKTYFGTVPVGSNGQSLVAEIIISFLLMFVISAVSTDERAVNDFAGVAIGMTIMLNVFIAGPVSGGSMNPARSIGPALIVHVYKGLWIYVVGPIVGAIVGAIAYNFLRSIKSPSELADEQFRNIVVG*