AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380016266.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016266.01.T01 MTR_3g086750 81.595 489 19 4 1 461 88 533 0.0 787
MsG0380016266.01.T01 MTR_5g062190 41.126 462 195 7 3 433 92 507 1.99e-116 351
MsG0380016266.01.T01 MTR_5g062290 39.262 461 205 6 3 433 90 505 2.48e-110 335
MsG0380016266.01.T01 MTR_3g009020 39.741 463 197 12 3 433 61 473 5.42e-103 316
MsG0380016266.01.T01 MTR_3g009030 40.173 463 195 13 3 433 85 497 5.28e-101 311
MsG0380016266.01.T01 MTR_3g008960 39.348 460 199 12 3 433 81 489 2.44e-100 309
MsG0380016266.01.T01 MTR_3g009010 39.046 461 201 11 3 433 152 562 2.80e-98 306
MsG0380016266.01.T01 MTR_8g091310 39.030 433 201 9 36 433 102 506 7.43e-96 298
MsG0380016266.01.T01 MTR_4g035760 45.669 127 69 0 307 433 53 179 2.14e-36 132
MsG0380016266.01.T01 MTR_5g061980 44.318 88 49 0 287 374 219 306 1.22e-17 84.3
MsG0380016266.01.T01 MTR_5g061980 40.800 125 54 5 78 185 78 199 3.71e-16 79.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 128 sgRNAs with CRISPR-Local

Find 297 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACTATGCTCCATTCCATTT+TGG 0.078300 3:-81251738 None:intergenic
TTTCCTTTGGTTGGTGTTAT+TGG 0.089715 3:+81253116 MsG0380016266.01.T01:CDS
GATCCTCCAAGTCCATTTAT+TGG 0.234600 3:+81251524 MsG0380016266.01.T01:CDS
TTTGTAGAAGTTCTTATTAT+TGG 0.242250 3:+81251871 MsG0380016266.01.T01:CDS
CATCTTCATGGGAAACATTC+AGG 0.242720 3:+81250013 MsG0380016266.01.T01:CDS
CAAAGTCTTGATAATCTGTT+AGG 0.251151 3:-81253063 None:intergenic
GCTGCTCCCGGTTCCCAAAA+TGG 0.255158 3:+81251724 MsG0380016266.01.T01:CDS
ATATACACTTTGGGACTCTT+TGG 0.258550 3:+81253309 MsG0380016266.01.T01:CDS
TTTAATTTCTAGGTATGTTT+TGG 0.259233 3:+81251834 MsG0380016266.01.T01:CDS
TGCAAAGCATCCTGCCTTGC+TGG 0.282128 3:+81252103 MsG0380016266.01.T01:CDS
TCAAGACTTCCTCCAATAAA+TGG 0.284259 3:-81251536 None:intergenic
AGGATCTACCAACTTAGTTT+TGG 0.303072 3:+81252295 MsG0380016266.01.T01:CDS
AGGAACAACTATCTTCAATT+AGG 0.303188 3:+81253184 MsG0380016266.01.T01:CDS
TTGTAGAAGTTCTTATTATT+GGG 0.313647 3:+81251872 MsG0380016266.01.T01:CDS
ATCAAACCTTCTTTGTTTGA+TGG 0.313848 3:+81249183 MsG0380016266.01.T01:five_prime_UTR
CATGGTGGATTTAAAGTTAG+AGG 0.345081 3:+81249123 MsG0380016266.01.T01:five_prime_UTR
CCACCGTCACATGTAAGAAA+TGG 0.346802 3:-81250366 None:intergenic
ACGAATATTTCCGAACGATT+TGG 0.348623 3:-81252202 None:intergenic
CTTGGTGCTAGCATTCTTGA+TGG 0.366232 3:+81248907 MsG0380016266.01.T01:five_prime_UTR
TGCTTACTTTATCCATTTCA+CGG 0.374634 3:+81250153 MsG0380016266.01.T01:CDS
TTGGTAGCCTTGCTTGTAAT+AGG 0.383961 3:-81252183 None:intergenic
ATCACTTCTGGAGTATATTC+AGG 0.384374 3:+81248980 MsG0380016266.01.T01:five_prime_UTR
AATTGGCAATGCAGATCCTT+TGG 0.399729 3:+81252253 MsG0380016266.01.T01:CDS
GTCTATAATGCAGTTTCCTT+TGG 0.400560 3:+81253103 MsG0380016266.01.T01:CDS
CTAACAGATTATCAAGACTT+TGG 0.401986 3:+81253064 MsG0380016266.01.T01:CDS
GATAAAGTAAGCACAGGAAA+TGG 0.408681 3:-81250143 None:intergenic
ACAGGGATTCCCCATCTTCA+TGG 0.411267 3:+81250001 MsG0380016266.01.T01:CDS
AAGTCGGGAAGGTCTGTTGC+AGG 0.412693 3:+81252394 MsG0380016266.01.T01:CDS
CACTTTGGGACTCTTTGGAT+TGG 0.416831 3:+81253314 MsG0380016266.01.T01:CDS
CTTCCTCCAATAAATGGACT+TGG 0.421956 3:-81251530 None:intergenic
AATGACTTTGAAATGTAATC+TGG 0.425615 3:-81251796 None:intergenic
TTTCAATTCCGTACCAATCA+AGG 0.427838 3:+81250342 MsG0380016266.01.T01:CDS
AGTGTATATATTCTGATTGT+TGG 0.428231 3:-81253295 None:intergenic
ATAATGCAGTTTCCTTTGGT+TGG 0.429534 3:+81253107 MsG0380016266.01.T01:CDS
GGAGGGTGGCTTGTTATTGA+AGG 0.431354 3:+81249156 MsG0380016266.01.T01:five_prime_UTR
TCTTTGGATTGGCTTTCACC+TGG 0.431793 3:+81253325 MsG0380016266.01.T01:CDS
ATAAATGGACTTGGAGGATC+AGG 0.438577 3:-81251521 None:intergenic
AAAGTTAGAGGAGTGAACTT+AGG 0.438588 3:+81249135 MsG0380016266.01.T01:five_prime_UTR
CAATCAGAATATATACACTT+TGG 0.445062 3:+81253299 MsG0380016266.01.T01:CDS
AATCAGAATATATACACTTT+GGG 0.445440 3:+81253300 MsG0380016266.01.T01:CDS
GAAATGTAATCTGGAGAAGT+TGG 0.451317 3:-81251787 None:intergenic
CGGGCCATTTGAATTGTTGA+AGG 0.451769 3:-81252417 None:intergenic
GTTAGAGGAGTGAACTTAGG+AGG 0.452306 3:+81249138 MsG0380016266.01.T01:five_prime_UTR
AATATGTATCTGCAGACAAT+GGG 0.454064 3:+81249957 MsG0380016266.01.T01:five_prime_UTR
TCATCCCACCCTGGTACGCC+TGG 0.454217 3:-81250757 None:intergenic
GAAAATGCAGAATCCATCAT+AGG 0.454866 3:-81248879 None:intergenic
ATTGACCTTCATGCTGCTCC+CGG 0.455176 3:+81251712 MsG0380016266.01.T01:CDS
GAATGAATGTGACAGTTGAC+AGG 0.461483 3:+81249983 MsG0380016266.01.T01:exon
TTTGAAGTGGAGGGGTTACA+TGG 0.465385 3:+81249105 MsG0380016266.01.T01:intron
CAGGCCTTCAACAATTCAAA+TGG 0.468996 3:+81252413 MsG0380016266.01.T01:CDS
TGTAAGAAATGGGCCTTGAT+TGG 0.469804 3:-81250355 None:intergenic
GATCTGCATTGCCAATTCTC+TGG 0.470111 3:-81252247 None:intergenic
TACAATACATATACAAAAGT+CGG 0.470112 3:+81252378 MsG0380016266.01.T01:CDS
GCAAAGCATCCTGCCTTGCT+GGG 0.470714 3:+81252104 MsG0380016266.01.T01:CDS
TTAGGTATGAAACCGTGAAA+TGG 0.470877 3:-81250165 None:intergenic
TTCTTTGTTAATATGAGTGC+TGG 0.472804 3:+81252347 MsG0380016266.01.T01:CDS
CTGAATGTTTCCCATGAAGA+TGG 0.473464 3:-81250012 None:intergenic
CACCGTCACATGTAAGAAAT+GGG 0.480113 3:-81250365 None:intergenic
CTTGTTTCTTTGAAGTGGAG+GGG 0.480230 3:+81249097 MsG0380016266.01.T01:intron
CTATCTTTATAGGCTACAAC+TGG 0.482204 3:+81250712 MsG0380016266.01.T01:intron
GTGATAATGTGCCAGAGAAT+TGG 0.482707 3:+81252236 MsG0380016266.01.T01:CDS
AGCAAGGCTACCAAATCGTT+CGG 0.482834 3:+81252192 MsG0380016266.01.T01:CDS
TCAAATGTCTCAGACGTTGA+AGG 0.487324 3:-81250420 None:intergenic
TTGGTGCTAGCATTCTTGAT+GGG 0.492911 3:+81248908 MsG0380016266.01.T01:five_prime_UTR
TGAGGATACCGGTTGGGTGG+TGG 0.493251 3:+81251486 MsG0380016266.01.T01:CDS
CCTCCAATAAATGGACTTGG+AGG 0.495773 3:-81251527 None:intergenic
TGAATGTTTCCCATGAAGAT+GGG 0.498897 3:-81250011 None:intergenic
ATGCAAATCCAAAACTAAGT+TGG 0.500518 3:-81252303 None:intergenic
GTGTATATATTCTGATTGTT+GGG 0.500854 3:-81253294 None:intergenic
AGCTCAATTCCCAGCAAGGC+AGG 0.501113 3:-81252113 None:intergenic
CAGGAGAGTGGGTGAATGAG+TGG 0.505279 3:+81253023 MsG0380016266.01.T01:intron
GAGCTTTATCAAGCCAACAT+AGG 0.508387 3:+81252275 MsG0380016266.01.T01:CDS
CAGGGATTCCCCATCTTCAT+GGG 0.509969 3:+81250002 MsG0380016266.01.T01:CDS
CAGCTTACAGCAGACTATCC+AGG 0.511302 3:+81250739 MsG0380016266.01.T01:CDS
AAAGCAATCCACCACCCAAC+CGG 0.513130 3:-81251494 None:intergenic
ATCTTCATGGGAAACATTCA+GGG 0.514450 3:+81250014 MsG0380016266.01.T01:CDS
TACAATTATCATTTCAAATG+TGG 0.515816 3:-81250788 None:intergenic
TTGTTTGATGGCATTGCCAA+TGG 0.517521 3:+81249195 MsG0380016266.01.T01:five_prime_UTR
TTAATTTCCTATTACAAGCA+AGG 0.520598 3:+81252176 MsG0380016266.01.T01:CDS
TTAGAGGAGTGAACTTAGGA+GGG 0.520834 3:+81249139 MsG0380016266.01.T01:five_prime_UTR
GCAATGCCATCAAACAAAGA+AGG 0.527389 3:-81249189 None:intergenic
AAAGAAACTGTGCCAGCTGA+TGG 0.527906 3:-81252146 None:intergenic
AATAAATACTGTGAGGATAC+CGG 0.529307 3:+81251475 MsG0380016266.01.T01:CDS
ACAATACATATACAAAAGTC+GGG 0.532332 3:+81252379 MsG0380016266.01.T01:CDS
TTTCTTACATGTGACGGTGG+AGG 0.533853 3:+81250369 MsG0380016266.01.T01:CDS
GCAGACTATCCAGGCGTACC+AGG 0.536546 3:+81250748 MsG0380016266.01.T01:CDS
AAAGTCTTGATAATCTGTTA+GGG 0.544709 3:-81253062 None:intergenic
TTCAAATTTCTATATGAACA+TGG 0.547778 3:+81251452 MsG0380016266.01.T01:CDS
CCTCCAAGTCCATTTATTGG+AGG 0.547901 3:+81251527 MsG0380016266.01.T01:CDS
ACTCACAAGCATGTCTCCAT+TGG 0.548184 3:-81249211 None:intergenic
GAGCATAGTGCAAGCAGAGA+TGG 0.549175 3:+81251751 MsG0380016266.01.T01:CDS
CTAACTGGTAATCTCCATGT+AGG 0.553851 3:-81250819 None:intergenic
ATCTCAAATATCAGGAGAGT+GGG 0.554315 3:+81253012 MsG0380016266.01.T01:intron
GGCCCATTTCTTACATGTGA+CGG 0.554380 3:+81250363 MsG0380016266.01.T01:CDS
GGTGGCTTGTTATTGAAGGA+TGG 0.558519 3:+81249160 MsG0380016266.01.T01:five_prime_UTR
TAAGTTGGTAGATCCTATGT+TGG 0.561236 3:-81252288 None:intergenic
TAACAAAGAATGTGTCAAAG+AGG 0.561592 3:-81252334 None:intergenic
AAATATGTATCTGCAGACAA+TGG 0.568845 3:+81249956 MsG0380016266.01.T01:five_prime_UTR
GAAATGGATAAAGTAAGCAC+AGG 0.574873 3:-81250149 None:intergenic
ATACTGTGAGGATACCGGTT+GGG 0.576799 3:+81251480 MsG0380016266.01.T01:CDS
TTGGCTTGATAAAGCTCCAA+AGG 0.586731 3:-81252269 None:intergenic
AATCTCAAATATCAGGAGAG+TGG 0.589980 3:+81253011 MsG0380016266.01.T01:intron
CTATCCAGGCGTACCAGGGT+GGG 0.591770 3:+81250753 MsG0380016266.01.T01:CDS
CAAAAGCTCAATTCCCAGCA+AGG 0.598883 3:-81252117 None:intergenic
TACATATACAAAAGTCGGGA+AGG 0.598981 3:+81252383 MsG0380016266.01.T01:CDS
ATTGTATCTAATAACCTACA+TGG 0.601786 3:+81250805 MsG0380016266.01.T01:CDS
GGGAACCGGGAGCAGCATGA+AGG 0.601896 3:-81251717 None:intergenic
TCCCGGTTCCCAAAATGGAA+TGG 0.613131 3:+81251729 MsG0380016266.01.T01:CDS
AAATAGCTATATTACAGTAG+AGG 0.615992 3:+81251427 MsG0380016266.01.T01:CDS
GAGGAGTGAACTTAGGAGGG+TGG 0.625009 3:+81249142 MsG0380016266.01.T01:five_prime_UTR
GAAATGGGCCTTGATTGGTA+CGG 0.632108 3:-81250350 None:intergenic
CTGTGAGGATACCGGTTGGG+TGG 0.633143 3:+81251483 MsG0380016266.01.T01:CDS
GAATGTTTCCCATGAAGATG+GGG 0.636416 3:-81250010 None:intergenic
AGGAGAGTGGGTGAATGAGT+GGG 0.637824 3:+81253024 MsG0380016266.01.T01:intron
GAAGTGGAGGGGTTACATGG+TGG 0.650799 3:+81249108 MsG0380016266.01.T01:intron
AATACTGTGAGGATACCGGT+TGG 0.651527 3:+81251479 MsG0380016266.01.T01:CDS
ACTATCCAGGCGTACCAGGG+TGG 0.651751 3:+81250752 MsG0380016266.01.T01:CDS
AGATTATCAAGACTTTGGAA+AGG 0.657543 3:+81253069 MsG0380016266.01.T01:CDS
AAAGTAAACAAGACAAAACC+AGG 0.661016 3:-81253343 None:intergenic
CAGACTATCCAGGCGTACCA+GGG 0.663790 3:+81250749 MsG0380016266.01.T01:CDS
AATGAATGTGACAGTTGACA+GGG 0.671114 3:+81249984 MsG0380016266.01.T01:exon
AGTCCAATAACACCAACCAA+AGG 0.673079 3:-81253119 None:intergenic
TGTATCTGCAGACAATGGGG+AGG 0.676843 3:+81249961 MsG0380016266.01.T01:five_prime_UTR
AACATGGAATAAATACTGTG+AGG 0.697922 3:+81251468 MsG0380016266.01.T01:CDS
GCTGAATTATCATCCCACCC+TGG 0.707594 3:-81250766 None:intergenic
CCATTTCTTACATGTGACGG+TGG 0.710780 3:+81250366 MsG0380016266.01.T01:CDS
ATATGTATCTGCAGACAATG+GGG 0.716461 3:+81249958 MsG0380016266.01.T01:five_prime_UTR
AATGAGTGGGATGTGACAAG+CGG 0.726351 3:+81253037 MsG0380016266.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTGAATAAATATTAAATG+TGG + Chr3:81249278-81249297 MsG0380016266.01.T01:intron 10.0%
!!! TTATTGAATTTTTAATTTCT+AGG + Chr3:81251824-81251843 MsG0380016266.01.T01:CDS 10.0%
!! ATAAATCAATACAAATAAGT+TGG - Chr3:81251303-81251322 None:intergenic 15.0%
!!! TTGTTTTTCAATATTATGTA+TGG - Chr3:81251351-81251370 None:intergenic 15.0%
!! AATCAGAATATATACACTTT+GGG + Chr3:81253300-81253319 MsG0380016266.01.T01:CDS 20.0%
!! ATGATATATGTACAAAATGT+AGG + Chr3:81249895-81249914 MsG0380016266.01.T01:intron 20.0%
!! ATTTGATACATGATTGAAAA+CGG + Chr3:81252967-81252986 MsG0380016266.01.T01:intron 20.0%
!! TACAATACATATACAAAAGT+CGG + Chr3:81252378-81252397 MsG0380016266.01.T01:CDS 20.0%
!! TACAATTATCATTTCAAATG+TGG - Chr3:81250791-81250810 None:intergenic 20.0%
!! TTCAAATTTCTATATGAACA+TGG + Chr3:81251452-81251471 MsG0380016266.01.T01:CDS 20.0%
!! TTGTAGAAGTTCTTATTATT+GGG + Chr3:81251872-81251891 MsG0380016266.01.T01:CDS 20.0%
!! TTTGTAGAAGTTCTTATTAT+TGG + Chr3:81251871-81251890 MsG0380016266.01.T01:CDS 20.0%
!!! AAACAGCATTACATTTTTTA+TGG - Chr3:81250550-81250569 None:intergenic 20.0%
!!! GATTTGATTTTTTCAGATTA+AGG + Chr3:81250099-81250118 MsG0380016266.01.T01:intron 20.0%
!!! TTAAAAGTCTAAGATCAATA+TGG - Chr3:81250667-81250686 None:intergenic 20.0%
!!! TTTAATTTCTAGGTATGTTT+TGG + Chr3:81251834-81251853 MsG0380016266.01.T01:CDS 20.0%
! AAATAGCTATATTACAGTAG+AGG + Chr3:81251427-81251446 MsG0380016266.01.T01:CDS 25.0%
! AATAAGATGAAAACAACTTG+TGG + Chr3:81251156-81251175 MsG0380016266.01.T01:intron 25.0%
! AATTGATATTCTTGAGTACA+TGG - Chr3:81251908-81251927 None:intergenic 25.0%
! ACAATACATATACAAAAGTC+GGG + Chr3:81252379-81252398 MsG0380016266.01.T01:CDS 25.0%
! ACTAACAGAAGATACATTTA+GGG + Chr3:81249778-81249797 MsG0380016266.01.T01:intron 25.0%
! ACTCAAGAATATCAATTAGA+GGG + Chr3:81251911-81251930 MsG0380016266.01.T01:intron 25.0%
! AGTGTATATATTCTGATTGT+TGG - Chr3:81253298-81253317 None:intergenic 25.0%
! ATATGTACAAAATGTAGGAT+GGG + Chr3:81249900-81249919 MsG0380016266.01.T01:intron 25.0%
! ATGACTATCACATTGAAAAT+CGG + Chr3:81250972-81250991 MsG0380016266.01.T01:intron 25.0%
! ATTGATATTCTTGAGTACAT+GGG - Chr3:81251907-81251926 None:intergenic 25.0%
! ATTGTATCTAATAACCTACA+TGG + Chr3:81250805-81250824 MsG0380016266.01.T01:CDS 25.0%
! CAATCAGAATATATACACTT+TGG + Chr3:81253299-81253318 MsG0380016266.01.T01:CDS 25.0%
! CAATTTGAATCTCAAATATC+AGG + Chr3:81253004-81253023 MsG0380016266.01.T01:intron 25.0%
! CTTATAACTTACTGAAAAGA+CGG - Chr3:81251034-81251053 None:intergenic 25.0%
! GTCTTACCAATAAAAATTAG+CGG - Chr3:81252440-81252459 None:intergenic 25.0%
! GTGTATATATTCTGATTGTT+GGG - Chr3:81253297-81253316 None:intergenic 25.0%
! GTTCTATCAAAAACCATATT+TGG - Chr3:81249654-81249673 None:intergenic 25.0%
! TAAGCGTAATGAGAAAAATA+AGG + Chr3:81250446-81250465 MsG0380016266.01.T01:CDS 25.0%
! TACTAACAGAAGATACATTT+AGG + Chr3:81249777-81249796 MsG0380016266.01.T01:intron 25.0%
! TACTCAAGAATATCAATTAG+AGG + Chr3:81251910-81251929 MsG0380016266.01.T01:intron 25.0%
! TATATGTACAAAATGTAGGA+TGG + Chr3:81249899-81249918 MsG0380016266.01.T01:intron 25.0%
! TCTTACCAATAAAAATTAGC+GGG - Chr3:81252439-81252458 None:intergenic 25.0%
! TGACTAACAAAAAACACATT+CGG - Chr3:81249367-81249386 None:intergenic 25.0%
! TTAATTTCCTATTACAAGCA+AGG + Chr3:81252176-81252195 MsG0380016266.01.T01:CDS 25.0%
! TTCAGATAATTATGCATTCA+AGG - Chr3:81252538-81252557 None:intergenic 25.0%
!! AAAGTCTTGATAATCTGTTA+GGG - Chr3:81253065-81253084 None:intergenic 25.0%
!! AATCAATACAAATAAGTTGG+AGG - Chr3:81251300-81251319 None:intergenic 25.0%
!! ATCAGACCATTTTCAATTTA+TGG - Chr3:81252610-81252629 None:intergenic 25.0%
!! ATTGGACTTTAAAAAATGAC+AGG + Chr3:81253134-81253153 MsG0380016266.01.T01:CDS 25.0%
!! TATATGAAGTTGCTTTACTA+TGG + Chr3:81250637-81250656 MsG0380016266.01.T01:intron 25.0%
!! TCTAGATAATGCATTTTCAT+GGG + Chr3:81251562-81251581 MsG0380016266.01.T01:CDS 25.0%
!! TTCAGAAATTCAACTGATTT+AGG - Chr3:81250186-81250205 None:intergenic 25.0%
!! TTGGACTTTAAAAAATGACA+GGG + Chr3:81253135-81253154 MsG0380016266.01.T01:CDS 25.0%
!!! AAACTTCTTTTTTCCTTTTG+AGG + Chr3:81251642-81251661 MsG0380016266.01.T01:intron 25.0%
!!! AATGACTTTGAAATGTAATC+TGG - Chr3:81251799-81251818 None:intergenic 25.0%
!!! AATTACATGTTTGATTTTGC+AGG + Chr3:81253264-81253283 MsG0380016266.01.T01:intron 25.0%
!!! ATTACATGTTTGATTTTGCA+GGG + Chr3:81253265-81253284 MsG0380016266.01.T01:intron 25.0%
!!! GTGTTTTTTGTTAGTCAATT+TGG + Chr3:81249370-81249389 MsG0380016266.01.T01:intron 25.0%
!!! TACATGTTTTCTGGTTAATT+TGG + Chr3:81249399-81249418 MsG0380016266.01.T01:intron 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG + Chr3:81249472-81249491 MsG0380016266.01.T01:intron 25.0%
AAAGGATAAATACTGCAGAT+AGG - Chr3:81250496-81250515 None:intergenic 30.0%
AAAGTAAACAAGACAAAACC+AGG - Chr3:81253346-81253365 None:intergenic 30.0%
AAATATGTATCTGCAGACAA+TGG + Chr3:81249956-81249975 MsG0380016266.01.T01:five_prime_UTR 30.0%
AACATGGAATAAATACTGTG+AGG + Chr3:81251468-81251487 MsG0380016266.01.T01:CDS 30.0%
AACCATTCGAAAAGATTTAG+AGG + Chr3:81249614-81249633 MsG0380016266.01.T01:intron 30.0%
AAGGATAAATACTGCAGATA+GGG - Chr3:81250495-81250514 None:intergenic 30.0%
AAGTATCTTGCTGAAAATTG+AGG - Chr3:81249254-81249273 None:intergenic 30.0%
AAGTGGCCATAAATTGAAAA+TGG + Chr3:81252601-81252620 MsG0380016266.01.T01:intron 30.0%
AATAAATACTGTGAGGATAC+CGG + Chr3:81251475-81251494 MsG0380016266.01.T01:CDS 30.0%
AATATGTATCTGCAGACAAT+GGG + Chr3:81249957-81249976 MsG0380016266.01.T01:five_prime_UTR 30.0%
AATTAAGCACATTCCTCAAA+AGG - Chr3:81251658-81251677 None:intergenic 30.0%
ACACAACAATCTGTAACTAT+TGG - Chr3:81252713-81252732 None:intergenic 30.0%
AGGAACAACTATCTTCAATT+AGG + Chr3:81253184-81253203 MsG0380016266.01.T01:CDS 30.0%
AGTATCTTGCTGAAAATTGA+GGG - Chr3:81249253-81249272 None:intergenic 30.0%
ATCACAAAGTCTATTCTGTA+AGG - Chr3:81252074-81252093 None:intergenic 30.0%
ATCACATTGAAAATCGGTTA+AGG + Chr3:81250978-81250997 MsG0380016266.01.T01:intron 30.0%
ATGCAAATCCAAAACTAAGT+TGG - Chr3:81252306-81252325 None:intergenic 30.0%
CAAAGTGACAAAAAAACAGT+TGG - Chr3:81252827-81252846 None:intergenic 30.0%
CAACTATCTTCAATTAGGTA+AGG + Chr3:81253189-81253208 MsG0380016266.01.T01:intron 30.0%
CTAACAGATTATCAAGACTT+TGG + Chr3:81253064-81253083 MsG0380016266.01.T01:CDS 30.0%
GAAGTAAACAGACAAATTTG+TGG - Chr3:81251278-81251297 None:intergenic 30.0%
GACTAACAAAAAACACATTC+GGG - Chr3:81249366-81249385 None:intergenic 30.0%
GATTTATAGAGAGACTAACA+TGG - Chr3:81250585-81250604 None:intergenic 30.0%
GCTTATACCACTATCTTTAT+AGG + Chr3:81250702-81250721 MsG0380016266.01.T01:intron 30.0%
GTTATCTACTGTCACAATTA+AGG + Chr3:81250918-81250937 MsG0380016266.01.T01:intron 30.0%
GTTCACATCAAGATAAAGAA+TGG + Chr3:81250468-81250487 MsG0380016266.01.T01:intron 30.0%
TAAAAAAATGCATGCCCATT+TGG - Chr3:81248945-81248964 None:intergenic 30.0%
TAACAAAGAATGTGTCAAAG+AGG - Chr3:81252337-81252356 None:intergenic 30.0%
TAGTGTCAAACAAAACTGAA+AGG - Chr3:81252469-81252488 None:intergenic 30.0%
TGCTTACTTTATCCATTTCA+CGG + Chr3:81250153-81250172 MsG0380016266.01.T01:CDS 30.0%
TGTAAGAAGAGTAGATCAAA+TGG + Chr3:81249539-81249558 MsG0380016266.01.T01:intron 30.0%
TTAACCAGAAAACATGTAAG+AGG - Chr3:81249397-81249416 None:intergenic 30.0%
TTAGGTAAGGACTATAGATT+TGG + Chr3:81253202-81253221 MsG0380016266.01.T01:intron 30.0%
TTATCATCCAGGGTTTATTA+CGG + Chr3:81251611-81251630 MsG0380016266.01.T01:intron 30.0%
TTCTCTGTATTTATCATCCA+GGG + Chr3:81251601-81251620 MsG0380016266.01.T01:intron 30.0%
TTCTTTGTTAATATGAGTGC+TGG + Chr3:81252347-81252366 MsG0380016266.01.T01:CDS 30.0%
TTGATCTACTCTTCTTACAA+CGG - Chr3:81249538-81249557 None:intergenic 30.0%
TTTCTCTGTATTTATCATCC+AGG + Chr3:81251600-81251619 MsG0380016266.01.T01:intron 30.0%
! AGATTATCAAGACTTTGGAA+AGG + Chr3:81253069-81253088 MsG0380016266.01.T01:CDS 30.0%
! ATCAAACCTTCTTTGTTTGA+TGG + Chr3:81249183-81249202 MsG0380016266.01.T01:five_prime_UTR 30.0%
! ATGTTTTTCTTCTCCTAAAG+TGG + Chr3:81252584-81252603 MsG0380016266.01.T01:intron 30.0%
! CAAAGTCTTGATAATCTGTT+AGG - Chr3:81253066-81253085 None:intergenic 30.0%
! CTCTAGATAATGCATTTTCA+TGG + Chr3:81251561-81251580 MsG0380016266.01.T01:CDS 30.0%
! GGTTTATTTGAGTTTACCTA+CGG - Chr3:81251237-81251256 None:intergenic 30.0%
! GTTTCTCTAATGGTTTTCTT+AGG - Chr3:81249597-81249616 None:intergenic 30.0%
! TCTACCAACTTTTCTACTAT+AGG - Chr3:81249468-81249487 None:intergenic 30.0%
! TGGTTTTTGATAGAACACTA+TGG + Chr3:81249658-81249677 MsG0380016266.01.T01:intron 30.0%
! TTGTTCTTGTTTCTTTGAAG+TGG + Chr3:81249092-81249111 MsG0380016266.01.T01:intron 30.0%
! TTTCAATTTATGGCCACTTT+AGG - Chr3:81252600-81252619 None:intergenic 30.0%
! TTTTCGAATGGTTTCTCTAA+TGG - Chr3:81249607-81249626 None:intergenic 30.0%
!! GAATGTGCTTTTTATTTGAG+AGG + Chr3:81252778-81252797 MsG0380016266.01.T01:intron 30.0%
!! GATTTTCATGAAGTTGATTG+AGG - Chr3:81252516-81252535 None:intergenic 30.0%
!!! TCTTGTTTTTTCATCACTTC+TGG + Chr3:81248968-81248987 MsG0380016266.01.T01:five_prime_UTR 30.0%
AAAGTTAGAGGAGTGAACTT+AGG + Chr3:81249135-81249154 MsG0380016266.01.T01:five_prime_UTR 35.0%
AAATGGTCTGATTTCAGACA+TGG + Chr3:81252618-81252637 MsG0380016266.01.T01:intron 35.0%
AACAGTATCTAATGACACAC+AGG + Chr3:81252647-81252666 MsG0380016266.01.T01:intron 35.0%
AAGAAGAGTAGATCAAATGG+AGG + Chr3:81249542-81249561 MsG0380016266.01.T01:intron 35.0%
AAGCACTTGTGAGACTATTT+GGG - Chr3:81251210-81251229 None:intergenic 35.0%
AAGCTATACTGGAGAGTTTA+TGG + Chr3:81251132-81251151 MsG0380016266.01.T01:intron 35.0%
AATCTCAAATATCAGGAGAG+TGG + Chr3:81253011-81253030 MsG0380016266.01.T01:intron 35.0%
AATGAATGTGACAGTTGACA+GGG + Chr3:81249984-81250003 MsG0380016266.01.T01:exon 35.0%
ACGAATATTTCCGAACGATT+TGG - Chr3:81252205-81252224 None:intergenic 35.0%
AGAAAGCGGAACAATTAACT+AGG - Chr3:81251391-81251410 None:intergenic 35.0%
AGACAAATTTGTGGAGACTT+AGG - Chr3:81251269-81251288 None:intergenic 35.0%
AGATTTAGAGGTCAATGAGT+TGG + Chr3:81249626-81249645 MsG0380016266.01.T01:intron 35.0%
AGCACCTATAGTAGAAAAGT+TGG + Chr3:81249461-81249480 MsG0380016266.01.T01:intron 35.0%
ATAATGCAGTTTCCTTTGGT+TGG + Chr3:81253107-81253126 MsG0380016266.01.T01:CDS 35.0%
ATATGTATCTGCAGACAATG+GGG + Chr3:81249958-81249977 MsG0380016266.01.T01:five_prime_UTR 35.0%
ATCGTAGCAACATATAATGC+TGG - Chr3:81250082-81250101 None:intergenic 35.0%
ATCTCAAATATCAGGAGAGT+GGG + Chr3:81253012-81253031 MsG0380016266.01.T01:intron 35.0%
ATCTTCATGGGAAACATTCA+GGG + Chr3:81250014-81250033 MsG0380016266.01.T01:CDS 35.0%
CCAATTTAGCAGAAAGCAAA+AGG - Chr3:81250514-81250533 None:intergenic 35.0%
CTATCTTTATAGGCTACAAC+TGG + Chr3:81250712-81250731 MsG0380016266.01.T01:intron 35.0%
CTTACTTTCAAAAACTCTCC+AGG - Chr3:81251073-81251092 None:intergenic 35.0%
GAAAATAGGCTTAGATGGTT+TGG + Chr3:81249486-81249505 MsG0380016266.01.T01:intron 35.0%
GAAAATGCAGAATCCATCAT+AGG - Chr3:81248882-81248901 None:intergenic 35.0%
GAAATGGATAAAGTAAGCAC+AGG - Chr3:81250152-81250171 None:intergenic 35.0%
GAAATGTAATCTGGAGAAGT+TGG - Chr3:81251790-81251809 None:intergenic 35.0%
GACAAATTTGTGGAGACTTA+GGG - Chr3:81251268-81251287 None:intergenic 35.0%
GATAAAGTAAGCACAGGAAA+TGG - Chr3:81250146-81250165 None:intergenic 35.0%
GTCTATAATGCAGTTTCCTT+TGG + Chr3:81253103-81253122 MsG0380016266.01.T01:CDS 35.0%
GTTGTAGCCTATAAAGATAG+TGG - Chr3:81250712-81250731 None:intergenic 35.0%
GTTTACCCTAAGAACATCTT+CGG - Chr3:81250869-81250888 None:intergenic 35.0%
TAAGCACTTGTGAGACTATT+TGG - Chr3:81251211-81251230 None:intergenic 35.0%
TACATATACAAAAGTCGGGA+AGG + Chr3:81252383-81252402 MsG0380016266.01.T01:CDS 35.0%
TACCAGTTAGCAAATGGTTA+TGG + Chr3:81250832-81250851 MsG0380016266.01.T01:intron 35.0%
TCAAGACTTCCTCCAATAAA+TGG - Chr3:81251539-81251558 None:intergenic 35.0%
TGAATGTTTCCCATGAAGAT+GGG - Chr3:81250014-81250033 None:intergenic 35.0%
TGGTAGAAAATAGGCTTAGA+TGG + Chr3:81249481-81249500 MsG0380016266.01.T01:intron 35.0%
TTAGGTATGAAACCGTGAAA+TGG - Chr3:81250168-81250187 None:intergenic 35.0%
TTATAGAGAGACTAACATGG+TGG - Chr3:81250582-81250601 None:intergenic 35.0%
TTCGTGCACAAATTGACTAA+GGG - Chr3:81249755-81249774 None:intergenic 35.0%
TTTCAATTCCGTACCAATCA+AGG + Chr3:81250342-81250361 MsG0380016266.01.T01:CDS 35.0%
TTTCGTGCACAAATTGACTA+AGG - Chr3:81249756-81249775 None:intergenic 35.0%
! AATGGCCCGCTAATTTTTAT+TGG + Chr3:81252431-81252450 MsG0380016266.01.T01:CDS 35.0%
! ACTATGCTCCATTCCATTTT+GGG - Chr3:81251740-81251759 None:intergenic 35.0%
! AGGATCTACCAACTTAGTTT+TGG + Chr3:81252295-81252314 MsG0380016266.01.T01:CDS 35.0%
! ATTCTGCATTTTCGCTTTCT+TGG + Chr3:81248889-81248908 MsG0380016266.01.T01:five_prime_UTR 35.0%
! CAATGAGTTGGATCCAAATA+TGG + Chr3:81249638-81249657 MsG0380016266.01.T01:intron 35.0%
! CCTTTTGCTTTCTGCTAAAT+TGG + Chr3:81250511-81250530 MsG0380016266.01.T01:intron 35.0%
! GACCTCTAAATCTTTTCGAA+TGG - Chr3:81249619-81249638 None:intergenic 35.0%
! GGGATTTTGAATGGAACATT+AGG + Chr3:81253164-81253183 MsG0380016266.01.T01:CDS 35.0%
! TGGGACTAAATTGACTTATC+TGG + Chr3:81249857-81249876 MsG0380016266.01.T01:intron 35.0%
! TGTCACAATTAAGGCTTGTT+AGG + Chr3:81250927-81250946 MsG0380016266.01.T01:intron 35.0%
!! ATATACACTTTGGGACTCTT+TGG + Chr3:81253309-81253328 MsG0380016266.01.T01:CDS 35.0%
!! ATCACTTCTGGAGTATATTC+AGG + Chr3:81248980-81248999 MsG0380016266.01.T01:five_prime_UTR 35.0%
!! CATGGTGGATTTAAAGTTAG+AGG + Chr3:81249123-81249142 MsG0380016266.01.T01:five_prime_UTR 35.0%
!! GCTGTTTTCATAAGCTATAC+TGG + Chr3:81251121-81251140 MsG0380016266.01.T01:intron 35.0%
!! TAAGTTGGTAGATCCTATGT+TGG - Chr3:81252291-81252310 None:intergenic 35.0%
!! TCTTGTTTCTTTGAAGTGGA+GGG + Chr3:81249096-81249115 MsG0380016266.01.T01:intron 35.0%
!! TTCTGGAGTATATTCAGGTA+AGG + Chr3:81248985-81249004 MsG0380016266.01.T01:intron 35.0%
!! TTCTTGTTTCTTTGAAGTGG+AGG + Chr3:81249095-81249114 MsG0380016266.01.T01:intron 35.0%
!! TTTCCTTTGGTTGGTGTTAT+TGG + Chr3:81253116-81253135 MsG0380016266.01.T01:CDS 35.0%
!!! GGGACTTGTTTTTACCAAAT+GGG + Chr3:81248928-81248947 MsG0380016266.01.T01:five_prime_UTR 35.0%
!!! TGGGACTTGTTTTTACCAAA+TGG + Chr3:81248927-81248946 MsG0380016266.01.T01:five_prime_UTR 35.0%
AATTGGCAATGCAGATCCTT+TGG + Chr3:81252253-81252272 MsG0380016266.01.T01:CDS 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG + Chr3:81249567-81249586 MsG0380016266.01.T01:intron 40.0%
AGTCCAATAACACCAACCAA+AGG - Chr3:81253122-81253141 None:intergenic 40.0%
ATCTCTGCAGTTACAGAAAG+CGG - Chr3:81251405-81251424 None:intergenic 40.0%
CACCGTCACATGTAAGAAAT+GGG - Chr3:81250368-81250387 None:intergenic 40.0%
CAGGCCTTCAACAATTCAAA+TGG + Chr3:81252413-81252432 MsG0380016266.01.T01:CDS 40.0%
CATCTTCATGGGAAACATTC+AGG + Chr3:81250013-81250032 MsG0380016266.01.T01:CDS 40.0%
CTAACTGGTAATCTCCATGT+AGG - Chr3:81250822-81250841 None:intergenic 40.0%
CTATTCTGTAAGGTCGACAA+AGG - Chr3:81252064-81252083 None:intergenic 40.0%
CTGAATGTTTCCCATGAAGA+TGG - Chr3:81250015-81250034 None:intergenic 40.0%
GAATGAATGTGACAGTTGAC+AGG + Chr3:81249983-81250002 MsG0380016266.01.T01:exon 40.0%
GAATGTTTCCCATGAAGATG+GGG - Chr3:81250013-81250032 None:intergenic 40.0%
GAGACTATTTGGGAAGCTTA+TGG - Chr3:81251200-81251219 None:intergenic 40.0%
GATCCTCCAAGTCCATTTAT+TGG + Chr3:81251524-81251543 MsG0380016266.01.T01:CDS 40.0%
GCAATGCCATCAAACAAAGA+AGG - Chr3:81249192-81249211 None:intergenic 40.0%
GGAGATTACCAGTTAGCAAA+TGG + Chr3:81250826-81250845 MsG0380016266.01.T01:intron 40.0%
GGTAAGGACTATAGATTTGG+TGG + Chr3:81253205-81253224 MsG0380016266.01.T01:intron 40.0%
TCAAATGTCTCAGACGTTGA+AGG - Chr3:81250423-81250442 None:intergenic 40.0%
TCCCTTAGAAAAGAGTGAGT+GGG + Chr3:81249435-81249454 MsG0380016266.01.T01:intron 40.0%
TCTTCTTACAACGGCATCTA+CGG - Chr3:81249529-81249548 None:intergenic 40.0%
TGTAAGAAATGGGCCTTGAT+TGG - Chr3:81250358-81250377 None:intergenic 40.0%
TTAGAGGAGTGAACTTAGGA+GGG + Chr3:81249139-81249158 MsG0380016266.01.T01:five_prime_UTR 40.0%
TTCCCTTAGAAAAGAGTGAG+TGG + Chr3:81249434-81249453 MsG0380016266.01.T01:intron 40.0%
! AGTCATTTCAAGTCGTGTCT+CGG + Chr3:81252670-81252689 MsG0380016266.01.T01:intron 40.0%
! ATAAATGGACTTGGAGGATC+AGG - Chr3:81251524-81251543 None:intergenic 40.0%
! CACTATGCTCCATTCCATTT+TGG - Chr3:81251741-81251760 None:intergenic 40.0%
! CTTCCTCCAATAAATGGACT+TGG - Chr3:81251533-81251552 None:intergenic 40.0%
! CTTTTGAATGAACCATCAGC+TGG + Chr3:81252134-81252153 MsG0380016266.01.T01:CDS 40.0%
! GAGCTTTATCAAGCCAACAT+AGG + Chr3:81252275-81252294 MsG0380016266.01.T01:CDS 40.0%
! GTCCATAACCATTTGCTAAC+TGG - Chr3:81250837-81250856 None:intergenic 40.0%
! GTGATAATGTGCCAGAGAAT+TGG + Chr3:81252236-81252255 MsG0380016266.01.T01:CDS 40.0%
! TAAAAAATGACAGGGAGCAC+TGG + Chr3:81253143-81253162 MsG0380016266.01.T01:CDS 40.0%
! TGGTCCTCTTACATGTTTTC+TGG + Chr3:81249390-81249409 MsG0380016266.01.T01:intron 40.0%
! TTGGCTTGATAAAGCTCCAA+AGG - Chr3:81252272-81252291 None:intergenic 40.0%
! TTGGTAGCCTTGCTTGTAAT+AGG - Chr3:81252186-81252205 None:intergenic 40.0%
! TTGTTTGATGGCATTGCCAA+TGG + Chr3:81249195-81249214 MsG0380016266.01.T01:five_prime_UTR 40.0%
!! AAAAAATGACAGGGAGCACT+GGG + Chr3:81253144-81253163 MsG0380016266.01.T01:CDS 40.0%
!! AGCTGTTTTCAAAGCAATCC+TGG + Chr3:81251052-81251071 MsG0380016266.01.T01:intron 40.0%
!! CTTGTTTCTTTGAAGTGGAG+GGG + Chr3:81249097-81249116 MsG0380016266.01.T01:intron 40.0%
!! GGTGGTGTCATTATAATCTC+TGG - Chr3:81249827-81249846 None:intergenic 40.0%
!! TTGGTGCTAGCATTCTTGAT+GGG + Chr3:81248908-81248927 MsG0380016266.01.T01:five_prime_UTR 40.0%
AAAGAAACTGTGCCAGCTGA+TGG - Chr3:81252149-81252168 None:intergenic 45.0%
AATACTGTGAGGATACCGGT+TGG + Chr3:81251479-81251498 MsG0380016266.01.T01:CDS 45.0%
AATGAGTGGGATGTGACAAG+CGG + Chr3:81253037-81253056 MsG0380016266.01.T01:CDS 45.0%
ACTCACAAGCATGTCTCCAT+TGG - Chr3:81249214-81249233 None:intergenic 45.0%
AGATCAAATGGAGGAGAGTC+AGG + Chr3:81249551-81249570 MsG0380016266.01.T01:intron 45.0%
AGCAAGGCTACCAAATCGTT+CGG + Chr3:81252192-81252211 MsG0380016266.01.T01:CDS 45.0%
AGTTGTGCCGTAATAAACCC+TGG - Chr3:81251621-81251640 None:intergenic 45.0%
ATACTCTCCACAACTGCAAC+AGG - Chr3:81250311-81250330 None:intergenic 45.0%
ATTTGTGGAGACTTAGGGCT+TGG - Chr3:81251263-81251282 None:intergenic 45.0%
CAAAAGCTCAATTCCCAGCA+AGG - Chr3:81252120-81252139 None:intergenic 45.0%
CCACAACTGCAACAGGAAAA+AGG - Chr3:81250304-81250323 None:intergenic 45.0%
CCACCGTCACATGTAAGAAA+TGG - Chr3:81250369-81250388 None:intergenic 45.0%
CCATTTCTTACATGTGACGG+TGG + Chr3:81250366-81250385 MsG0380016266.01.T01:CDS 45.0%
CCCTTAGAAAAGAGTGAGTG+GGG + Chr3:81249436-81249455 MsG0380016266.01.T01:intron 45.0%
CCTCCAAGTCCATTTATTGG+AGG + Chr3:81251527-81251546 MsG0380016266.01.T01:CDS 45.0%
CCTTAGAAAAGAGTGAGTGG+GGG + Chr3:81249437-81249456 MsG0380016266.01.T01:intron 45.0%
CGGGCCATTTGAATTGTTGA+AGG - Chr3:81252420-81252439 None:intergenic 45.0%
CTTCTTACAACGGCATCTAC+GGG - Chr3:81249528-81249547 None:intergenic 45.0%
GAAATGGGCCTTGATTGGTA+CGG - Chr3:81250353-81250372 None:intergenic 45.0%
GAGGAGAGTCAGGTTAAAAG+AGG + Chr3:81249561-81249580 MsG0380016266.01.T01:intron 45.0%
GATCTGCATTGCCAATTCTC+TGG - Chr3:81252250-81252269 None:intergenic 45.0%
GGCCCATTTCTTACATGTGA+CGG + Chr3:81250363-81250382 MsG0380016266.01.T01:CDS 45.0%
GTTAGAGGAGTGAACTTAGG+AGG + Chr3:81249138-81249157 MsG0380016266.01.T01:five_prime_UTR 45.0%
TCACAAGTGCTTATGTCCGT+AGG + Chr3:81251218-81251237 MsG0380016266.01.T01:intron 45.0%
TTTCTTACATGTGACGGTGG+AGG + Chr3:81250369-81250388 MsG0380016266.01.T01:CDS 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - Chr3:81249707-81249726 None:intergenic 45.0%
! ATACTGTGAGGATACCGGTT+GGG + Chr3:81251480-81251499 MsG0380016266.01.T01:CDS 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - Chr3:81249708-81249727 None:intergenic 45.0%
! CCCCACTCACTCTTTTCTAA+GGG - Chr3:81249439-81249458 None:intergenic 45.0%
! CCTCCAATAAATGGACTTGG+AGG - Chr3:81251530-81251549 None:intergenic 45.0%
! CCTTTTTCCTGTTGCAGTTG+TGG + Chr3:81250301-81250320 MsG0380016266.01.T01:intron 45.0%
! TGCATTTTCATGGGCACAGT+AGG + Chr3:81251571-81251590 MsG0380016266.01.T01:intron 45.0%
! TTTCTAAGGGAAGACACACG+AGG - Chr3:81249426-81249445 None:intergenic 45.0%
! TTTGAAGTGGAGGGGTTACA+TGG + Chr3:81249105-81249124 MsG0380016266.01.T01:intron 45.0%
!! CACTTTGGGACTCTTTGGAT+TGG + Chr3:81253314-81253333 MsG0380016266.01.T01:CDS 45.0%
!! CTCCATTCCATTTTGGGAAC+CGG - Chr3:81251734-81251753 None:intergenic 45.0%
!! CTTGGTGCTAGCATTCTTGA+TGG + Chr3:81248907-81248926 MsG0380016266.01.T01:five_prime_UTR 45.0%
!! GCAAGCAGAGATGGTTTTAC+AGG + Chr3:81251760-81251779 MsG0380016266.01.T01:CDS 45.0%
!! GGTGGCTTGTTATTGAAGGA+TGG + Chr3:81249160-81249179 MsG0380016266.01.T01:five_prime_UTR 45.0%
!! TCCATTCCATTTTGGGAACC+GGG - Chr3:81251733-81251752 None:intergenic 45.0%
!! TCTTTGGATTGGCTTTCACC+TGG + Chr3:81253325-81253344 MsG0380016266.01.T01:CDS 45.0%
AAAGCAATCCACCACCCAAC+CGG - Chr3:81251497-81251516 None:intergenic 50.0%
ACAGGGATTCCCCATCTTCA+TGG + Chr3:81250001-81250020 MsG0380016266.01.T01:CDS 50.0%
AGGAGAGTGGGTGAATGAGT+GGG + Chr3:81253024-81253043 MsG0380016266.01.T01:intron 50.0%
ATTGACCTTCATGCTGCTCC+CGG + Chr3:81251712-81251731 MsG0380016266.01.T01:CDS 50.0%
ATTTAGTCCCACAACGAGCG+AGG - Chr3:81249848-81249867 None:intergenic 50.0%
CAGCTTACAGCAGACTATCC+AGG + Chr3:81250739-81250758 MsG0380016266.01.T01:CDS 50.0%
CAGGGATTCCCCATCTTCAT+GGG + Chr3:81250002-81250021 MsG0380016266.01.T01:CDS 50.0%
CCACTTAGTGGGATAAGGCT+TGG + Chr3:81249706-81249725 MsG0380016266.01.T01:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG - Chr3:81249703-81249722 None:intergenic 50.0%
GAGCATAGTGCAAGCAGAGA+TGG + Chr3:81251751-81251770 MsG0380016266.01.T01:CDS 50.0%
GCTGAATTATCATCCCACCC+TGG - Chr3:81250769-81250788 None:intergenic 50.0%
TCCCGGTTCCCAAAATGGAA+TGG + Chr3:81251729-81251748 MsG0380016266.01.T01:CDS 50.0%
TGGAGACTTAGGGCTTGGAT+TGG - Chr3:81251258-81251277 None:intergenic 50.0%
TGTATCTGCAGACAATGGGG+AGG + Chr3:81249961-81249980 MsG0380016266.01.T01:five_prime_UTR 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - Chr3:81249709-81249728 None:intergenic 50.0%
! CCCCCACTCACTCTTTTCTA+AGG - Chr3:81249440-81249459 None:intergenic 50.0%
!! AGAGCGCCGAAGATGTTCTT+AGG + Chr3:81250860-81250879 MsG0380016266.01.T01:intron 50.0%
!! GAGCGCCGAAGATGTTCTTA+GGG + Chr3:81250861-81250880 MsG0380016266.01.T01:intron 50.0%
!! GCAGAGATGGTTTTACAGGC+TGG + Chr3:81251764-81251783 MsG0380016266.01.T01:CDS 50.0%
!! GGAGGGTGGCTTGTTATTGA+AGG + Chr3:81249156-81249175 MsG0380016266.01.T01:five_prime_UTR 50.0%
!!! GGGAGCACTGGGATTTTGAA+TGG + Chr3:81253155-81253174 MsG0380016266.01.T01:CDS 50.0%
AAGTCGGGAAGGTCTGTTGC+AGG + Chr3:81252394-81252413 MsG0380016266.01.T01:CDS 55.0%
ACTAAGTGGGGTCGGCTACA+TGG - Chr3:81249695-81249714 None:intergenic 55.0%
AGCTCAATTCCCAGCAAGGC+AGG - Chr3:81252116-81252135 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + Chr3:81249694-81249713 MsG0380016266.01.T01:intron 55.0%
CAGACTATCCAGGCGTACCA+GGG + Chr3:81250749-81250768 MsG0380016266.01.T01:CDS 55.0%
CAGGAGAGTGGGTGAATGAG+TGG + Chr3:81253023-81253042 MsG0380016266.01.T01:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + Chr3:81249701-81249720 MsG0380016266.01.T01:intron 55.0%
GAAGTGGAGGGGTTACATGG+TGG + Chr3:81249108-81249127 MsG0380016266.01.T01:intron 55.0%
GAGGAGTGAACTTAGGAGGG+TGG + Chr3:81249142-81249161 MsG0380016266.01.T01:five_prime_UTR 55.0%
TGTAGCCGACCCCACTTAGT+GGG + Chr3:81249695-81249714 MsG0380016266.01.T01:intron 55.0%
! GCAAAGCATCCTGCCTTGCT+GGG + Chr3:81252104-81252123 MsG0380016266.01.T01:CDS 55.0%
! TGCAAAGCATCCTGCCTTGC+TGG + Chr3:81252103-81252122 MsG0380016266.01.T01:CDS 55.0%
ACTATCCAGGCGTACCAGGG+TGG + Chr3:81250752-81250771 MsG0380016266.01.T01:CDS 60.0%
CTATCCAGGCGTACCAGGGT+GGG + Chr3:81250753-81250772 MsG0380016266.01.T01:CDS 60.0%
GACACCACCTCGCTCGTTGT+GGG + Chr3:81249838-81249857 MsG0380016266.01.T01:intron 60.0%
GCAGACTATCCAGGCGTACC+AGG + Chr3:81250748-81250767 MsG0380016266.01.T01:CDS 60.0%
GCTGCTCCCGGTTCCCAAAA+TGG + Chr3:81251724-81251743 MsG0380016266.01.T01:CDS 60.0%
TAGTCCCACAACGAGCGAGG+TGG - Chr3:81249845-81249864 None:intergenic 60.0%
TGACACCACCTCGCTCGTTG+TGG + Chr3:81249837-81249856 MsG0380016266.01.T01:intron 60.0%
! CTGTGAGGATACCGGTTGGG+TGG + Chr3:81251483-81251502 MsG0380016266.01.T01:CDS 60.0%
! TGAGGATACCGGTTGGGTGG+TGG + Chr3:81251486-81251505 MsG0380016266.01.T01:CDS 60.0%
GGGAACCGGGAGCAGCATGA+AGG - Chr3:81251720-81251739 None:intergenic 65.0%
TCATCCCACCCTGGTACGCC+TGG - Chr3:81250760-81250779 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 81248868 81253371 81248868 ID=MsG0380016266.01;Name=MsG0380016266.01
Chr3 mRNA 81248868 81253371 81248868 ID=MsG0380016266.01.T01;Parent=MsG0380016266.01;Name=MsG0380016266.01.T01;_AED=0.45;_eAED=0.45;_QI=318|0.2|0.27|0.90|0.8|0.72|11|0|461
Chr3 exon 81248868 81249001 81248868 ID=MsG0380016266.01.T01:exon:13726;Parent=MsG0380016266.01.T01
Chr3 exon 81249112 81249227 81249112 ID=MsG0380016266.01.T01:exon:13727;Parent=MsG0380016266.01.T01
Chr3 exon 81249917 81250035 81249917 ID=MsG0380016266.01.T01:exon:13728;Parent=MsG0380016266.01.T01
Chr3 exon 81250115 81250174 81250115 ID=MsG0380016266.01.T01:exon:13729;Parent=MsG0380016266.01.T01
Chr3 exon 81250318 81250467 81250318 ID=MsG0380016266.01.T01:exon:13730;Parent=MsG0380016266.01.T01
Chr3 exon 81250724 81250836 81250724 ID=MsG0380016266.01.T01:exon:13731;Parent=MsG0380016266.01.T01
Chr3 exon 81251421 81251588 81251421 ID=MsG0380016266.01.T01:exon:13732;Parent=MsG0380016266.01.T01
Chr3 exon 81251690 81251893 81251690 ID=MsG0380016266.01.T01:exon:13733;Parent=MsG0380016266.01.T01
Chr3 exon 81252079 81252452 81252079 ID=MsG0380016266.01.T01:exon:13734;Parent=MsG0380016266.01.T01
Chr3 exon 81253026 81253205 81253026 ID=MsG0380016266.01.T01:exon:13735;Parent=MsG0380016266.01.T01
Chr3 exon 81253286 81253371 81253286 ID=MsG0380016266.01.T01:exon:13736;Parent=MsG0380016266.01.T01
Chr3 five_prime_UTR 81248868 81249001 81248868 ID=MsG0380016266.01.T01:five_prime_utr;Parent=MsG0380016266.01.T01
Chr3 five_prime_UTR 81249112 81249227 81249112 ID=MsG0380016266.01.T01:five_prime_utr;Parent=MsG0380016266.01.T01
Chr3 five_prime_UTR 81249917 81249984 81249917 ID=MsG0380016266.01.T01:five_prime_utr;Parent=MsG0380016266.01.T01
Chr3 CDS 81249985 81250035 81249985 ID=MsG0380016266.01.T01:cds;Parent=MsG0380016266.01.T01
Chr3 CDS 81250115 81250174 81250115 ID=MsG0380016266.01.T01:cds;Parent=MsG0380016266.01.T01
Chr3 CDS 81250318 81250467 81250318 ID=MsG0380016266.01.T01:cds;Parent=MsG0380016266.01.T01
Chr3 CDS 81250724 81250836 81250724 ID=MsG0380016266.01.T01:cds;Parent=MsG0380016266.01.T01
Chr3 CDS 81251421 81251588 81251421 ID=MsG0380016266.01.T01:cds;Parent=MsG0380016266.01.T01
Chr3 CDS 81251690 81251893 81251690 ID=MsG0380016266.01.T01:cds;Parent=MsG0380016266.01.T01
Chr3 CDS 81252079 81252452 81252079 ID=MsG0380016266.01.T01:cds;Parent=MsG0380016266.01.T01
Chr3 CDS 81253026 81253205 81253026 ID=MsG0380016266.01.T01:cds;Parent=MsG0380016266.01.T01
Chr3 CDS 81253286 81253371 81253286 ID=MsG0380016266.01.T01:cds;Parent=MsG0380016266.01.T01
Gene Sequence

>MsG0380016266.01.T01

ATGAATGTGACAGTTGACAGGGATTCCCCATCTTCATGGGAAACATTCAGGATTAAGGATTATGTGTCTAGTTGTCAGTCCATTTCCTGTGCTTACTTTATCCATTTCACGTTGTGGAGAGTATCTGAATCTGAATTTCAATTCCGTACCAATCAAGGCCCATTTCTTACATGTGACGGTGGAGGCTGCACTGTCTCTGCAACAGCAAAATCGCCTTCAACGTCTGAGACATTTGAAGTTAAGCGTAATGAGAAAAATAAGGCTACAACTGGTAATCAGCTTACAGCAGACTATCCAGGCGTACCAGGGTGGGATGATAATTCAGCCACATTTGAAATGATAATTGTATCTAATAACCTACATGGAGATTACCAAGATAGAAATAGCTATATTACAGTAGAGGATTTCAAATTTCTATATGAACATGGAATAAATACTGTGAGGATACCGGTTGGGTGGTGGATTGCTTTTGATCCTGATCCTCCAAGTCCATTTATTGGAGGAAGTCTTGAAGCTCTAGATAATGCATTTTCATGGGCACAAGAATATGATATAAAATGCATTATTGACCTTCATGCTGCTCCCGGTTCCCAAAATGGAATGGAGCATAGTGCAAGCAGAGATGGTTTTACAGGCTGGCCAACTTCTCCAGATTACATTTCAAAGTCATTACATGTTATTGAATTTTTAATTTCTAGGTATGTTTTGGATGTGCTAACTATATTTGTAGAAGTTCTTATTATTGGAATAGACTTTGTGATTTGCAGATTTGCAAAGCATCCTGCCTTGCTGGGAATTGAGCTTTTGAATGAACCATCAGCTGGCACAGTTTCTTTAGATATTTTAATTTCCTATTACAAGCAAGGCTACCAAATCGTTCGGAAATATTCGTCGACAGCTTATGTGATAATGTGCCAGAGAATTGGCAATGCAGATCCTTTGGAGCTTTATCAAGCCAACATAGGATCTACCAACTTAGTTTTGGATTTGCATTTCTACAACCTCTTTGACACATTCTTTGTTAATATGAGTGCTGGTGATAATGTACAATACATATACAAAAGTCGGGAAGGTCTGTTGCAGGCCTTCAACAATTCAAATGGCCCGCTAATTTTTATTGGAGAGTGGGTGAATGAGTGGGATGTGACAAGCGGATCCCTAACAGATTATCAAGACTTTGGAAAGGCACAATTAGACGTCTATAATGCAGTTTCCTTTGGTTGGTGTTATTGGACTTTAAAAAATGACAGGGAGCACTGGGATTTTGAATGGAACATTAGGAACAACTATCTTCAATTAGGGTTATCACCCAACAATCAGAATATATACACTTTGGGACTCTTTGGATTGGCTTTCACCTGGTTTTGTCTTGTTTACTTTTTGTGA
Protein sequence

>MsG0380016266.01.T01

MNVTVDRDSPSSWETFRIKDYVSSCQSISCAYFIHFTLWRVSESEFQFRTNQGPFLTCDGGGCTVSATAKSPSTSETFEVKRNEKNKATTGNQLTADYPGVPGWDDNSATFEMIIVSNNLHGDYQDRNSYITVEDFKFLYEHGINTVRIPVGWWIAFDPDPPSPFIGGSLEALDNAFSWAQEYDIKCIIDLHAAPGSQNGMEHSASRDGFTGWPTSPDYISKSLHVIEFLISRYVLDVLTIFVEVLIIGIDFVICRFAKHPALLGIELLNEPSAGTVSLDILISYYKQGYQIVRKYSSTAYVIMCQRIGNADPLELYQANIGSTNLVLDLHFYNLFDTFFVNMSAGDNVQYIYKSREGLLQAFNNSNGPLIFIGEWVNEWDVTSGSLTDYQDFGKAQLDVYNAVSFGWCYWTLKNDREHWDFEWNIRNNYLQLGLSPNNQNIYTLGLFGLAFTWFCLVYFL*