AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780039186.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039186.01.T01 MTR_7g067380 97.992 498 10 0 1 498 1 498 0.0 1003
MsG0780039186.01.T01 MTR_4g415290 84.444 495 75 2 3 496 1 494 0.0 840
MsG0780039186.01.T01 MTR_8g030620 63.211 492 176 4 7 493 8 499 0.0 649
MsG0780039186.01.T01 MTR_1g040500 55.984 493 211 3 11 498 7 498 0.0 563
MsG0780039186.01.T01 MTR_5g080360 51.688 474 220 3 24 491 2 472 9.56e-163 470
MsG0780039186.01.T01 MTR_5g091660 50.313 479 223 7 19 491 60 529 4.67e-155 452
MsG0780039186.01.T01 MTR_3g448430 48.218 477 235 6 19 491 43 511 1.70e-151 442
MsG0780039186.01.T01 MTR_1g086650 42.455 497 266 10 9 496 49 534 3.38e-123 371
MsG0780039186.01.T01 MTR_5g061520 39.800 500 273 7 10 496 2 486 2.20e-116 352
MsG0780039186.01.T01 MTR_3g048330 53.901 282 117 3 222 495 1 277 4.53e-101 305
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039186.01.T01 AT2G38110 77.778 495 106 2 7 498 8 501 0.0 786
MsG0780039186.01.T01 AT4G00400 62.041 490 180 4 7 493 8 494 0.0 609
MsG0780039186.01.T01 AT1G01610 61.963 489 179 5 9 493 10 495 0.0 606
MsG0780039186.01.T01 AT3G11430 51.452 482 213 4 22 491 9 481 1.18e-163 473
MsG0780039186.01.T01 AT5G06090 48.354 486 230 4 18 491 3 479 8.23e-151 440
MsG0780039186.01.T01 AT1G06520 46.045 493 241 10 18 491 98 584 1.83e-142 422
MsG0780039186.01.T01 AT1G02390 38.086 512 284 11 8 494 27 530 2.52e-105 325
MsG0780039186.01.T01 AT4G01950 37.721 509 288 12 2 491 19 517 6.51e-102 315
MsG0780039186.01.T01 AT4G01950 37.721 509 288 12 2 491 47 545 2.09e-101 315
MsG0780039186.01.T01 AT3G11325 38.043 460 187 10 34 491 6 369 2.41e-87 273
MsG0780039186.01.T01 AT3G11325 38.043 460 187 10 34 491 9 372 3.17e-87 273

Find 135 sgRNAs with CRISPR-Local

Find 279 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTGAAAACACATTAAATT+TGG 0.180394 7:+59335901 None:intergenic
TCAGTCTAATTTGCCTGATT+TGG 0.196119 7:-59339275 MsG0780039186.01.T01:CDS
TGGAATGTGTTCAATTCTTT+TGG 0.207233 7:-59339484 MsG0780039186.01.T01:CDS
CCACTAACTGTAAGCTCTTT+AGG 0.240056 7:+59336123 None:intergenic
GCATAATACTTTCTATCTTA+AGG 0.253890 7:-59336677 MsG0780039186.01.T01:CDS
CCCAGTTGCCCTTCCCGATT+TGG 0.258883 7:+59339360 None:intergenic
GAAAGTGCCACTGCTTTAAT+TGG 0.262083 7:+59336420 None:intergenic
TGGTACAATTATAAACTATT+AGG 0.266176 7:-59336618 MsG0780039186.01.T01:CDS
TCCTCTGCAGGAAGGGTATA+TGG 0.267172 7:-59336829 MsG0780039186.01.T01:intron
AGTGGATCACATTTAATTCT+TGG 0.268820 7:+59336804 None:intergenic
GGATTCATGAACACAAAATA+AGG 0.281571 7:+59336183 None:intergenic
CAGTCTAATTTGCCTGATTT+GGG 0.282394 7:-59339274 MsG0780039186.01.T01:CDS
AGGAGCCTGGTGTTCTTGTT+GGG 0.300559 7:-59339330 MsG0780039186.01.T01:CDS
ACCAAATCGGGAAGGGCAAC+TGG 0.300938 7:-59339361 MsG0780039186.01.T01:CDS
GAATTGTTGTACTTTGAAAT+TGG 0.303441 7:+59339802 None:intergenic
CATAATACTTTCTATCTTAA+GGG 0.307071 7:-59336676 MsG0780039186.01.T01:CDS
GGACTTAGAAGTTTAGTTCT+TGG 0.323980 7:+59336780 None:intergenic
TCCCTACAAGTTGTTCCTTC+CGG 0.348891 7:+59336330 None:intergenic
ATTCCCTTACTACATGCTTA+TGG 0.355427 7:-59339713 MsG0780039186.01.T01:CDS
CCTAAAGAGCTTACAGTTAG+TGG 0.359503 7:-59336123 MsG0780039186.01.T01:CDS
TATATTCAAAGGGTTCTTGC+TGG 0.360292 7:-59336072 MsG0780039186.01.T01:CDS
AGGAATCAAAGTAATTGTTA+AGG 0.363357 7:-59336598 MsG0780039186.01.T01:CDS
GATAAGTATGCCATGCTTGC+TGG 0.365490 7:-59336012 MsG0780039186.01.T01:CDS
GTGGTTACAGCAGTTGCATT+AGG 0.369985 7:-59336498 MsG0780039186.01.T01:CDS
CGATGGTTTCTGAGACAAAA+AGG 0.373974 7:+59339620 None:intergenic
ACGTCCTCAGCGTAGAATTT+CGG 0.374562 7:+59339520 None:intergenic
GTAAGAGGATGATTCCTCTT+AGG 0.380558 7:+59339671 None:intergenic
GCACCAAGAAAAGGTCAAAA+AGG 0.382407 7:-59336561 MsG0780039186.01.T01:CDS
ATTAACCGATAGGATTGTTC+CGG 0.386364 7:-59336271 MsG0780039186.01.T01:CDS
AAGGAGCCTGGTGTTCTTGT+TGG 0.388349 7:-59339331 MsG0780039186.01.T01:CDS
GGAATCAAAGTAATTGTTAA+GGG 0.391051 7:-59336597 MsG0780039186.01.T01:CDS
GAATTTGTTGGGAGGTGATA+AGG 0.394560 7:-59339407 MsG0780039186.01.T01:CDS
AAGGGCAACTGGGTTTGTTA+AGG 0.407100 7:-59339350 MsG0780039186.01.T01:CDS
CCCAACAAATTCTTAACAAA+TGG 0.410137 7:+59339418 None:intergenic
TAACTATATAGAATTCAAAA+AGG 0.412432 7:+59335924 None:intergenic
TCTTAGGAAACTACCGGCTT+CGG 0.414793 7:+59339687 None:intergenic
AAATGTGTTATGAGGAGAAA+AGG 0.414960 7:+59339919 None:intergenic
TGAAAGGGACGGAGAGTAAG+AGG 0.416211 7:+59339656 None:intergenic
AGGGTTCTTGCTGGAACACT+TGG 0.417445 7:-59336063 MsG0780039186.01.T01:CDS
ATAAATACTAACCTTGCAAA+TGG 0.421413 7:+59339216 None:intergenic
TTGCCTTGTTATCATTCCTA+TGG 0.422430 7:-59336710 MsG0780039186.01.T01:CDS
AATGATAACAAGGCAACAAT+AGG 0.425246 7:+59336717 None:intergenic
CCATTTGTTAAGAATTTGTT+GGG 0.427000 7:-59339418 MsG0780039186.01.T01:CDS
TGAACTTGAGGTGACCAAAT+CGG 0.429869 7:-59339374 MsG0780039186.01.T01:CDS
TTGTGATGATGCTCATGAAA+TGG 0.429921 7:-59335846 MsG0780039186.01.T01:three_prime_UTR
TTGGGAGGTGATAAGGTGAA+TGG 0.435270 7:-59339400 MsG0780039186.01.T01:CDS
CTATCTCCCAGTCCCAAATC+AGG 0.435448 7:+59339262 None:intergenic
AGAAGTTTAGTTCTTGGTAG+TGG 0.438170 7:+59336786 None:intergenic
GAACTTGAGGTGACCAAATC+GGG 0.438703 7:-59339373 MsG0780039186.01.T01:CDS
TAATTTGCCTGATTTGGGAC+TGG 0.444415 7:-59339269 MsG0780039186.01.T01:CDS
ACTGGGTTTGTTAAGGAGCC+TGG 0.448681 7:-59339343 MsG0780039186.01.T01:CDS
ATGAGGAGAAAAGGAGAAGG+AGG 0.450194 7:+59339928 None:intergenic
GCCATTTGTTAAGAATTTGT+TGG 0.451477 7:-59339419 MsG0780039186.01.T01:CDS
AATTTGCCTGATTTGGGACT+GGG 0.452524 7:-59339268 MsG0780039186.01.T01:CDS
ATAGAAAGTATTATGCCAAT+TGG 0.456267 7:+59336684 None:intergenic
TGTTTCGTGTTAATTGCAAC+CGG 0.459361 7:+59336252 None:intergenic
CAGTGGCACTTTCAAGAGAA+AGG 0.461557 7:-59336410 MsG0780039186.01.T01:CDS
GCGCTGAACCGTAGAAGAAA+TGG 0.471044 7:+59336306 None:intergenic
GTAGAGTGAGGTTGAGAAGA+TGG 0.473870 7:+59339863 None:intergenic
TTGAACACATTCCACGTCTC+AGG 0.473991 7:+59339493 None:intergenic
TCATTCCTATGGCTACCAAT+TGG 0.476760 7:-59336699 MsG0780039186.01.T01:CDS
ATGCTTATGGCTACCGAAGC+CGG 0.481581 7:-59339700 MsG0780039186.01.T01:CDS
GTCCGGAAGGAACAACTTGT+AGG 0.482795 7:-59336332 MsG0780039186.01.T01:CDS
AGTGAATGAGGTATTTAGAA+TGG 0.488649 7:+59339892 None:intergenic
GTAGGGAACCATTTCTTCTA+CGG 0.489695 7:-59336314 MsG0780039186.01.T01:CDS
CACGGCTAGTCCAAGGTTGA+TGG 0.489858 7:-59339446 MsG0780039186.01.T01:CDS
CTAAGTCAGATGCAACGGTT+TGG 0.489913 7:+59339764 None:intergenic
TTTCTGGTAAGGGAATGTTT+AGG 0.490656 7:+59336649 None:intergenic
ACTTTGAAATTGGTTTGAAA+TGG 0.491494 7:+59339812 None:intergenic
ACCGTTGCATCTGACTTAGA+TGG 0.496852 7:-59339760 MsG0780039186.01.T01:CDS
TGAGGAGAAAAGGAGAAGGA+GGG 0.502630 7:+59339929 None:intergenic
AGTTGCAAATTATATTCAAA+GGG 0.504087 7:-59336082 MsG0780039186.01.T01:CDS
AAGTTGCAAATTATATTCAA+AGG 0.504845 7:-59336083 MsG0780039186.01.T01:CDS
GGAGCCTGGTGTTCTTGTTG+GGG 0.507561 7:-59339329 MsG0780039186.01.T01:CDS
AATGGCTCCACCATCAACCT+TGG 0.511121 7:+59339436 None:intergenic
ATAAGGAAATTACTTGAAGA+AGG 0.512819 7:-59336369 MsG0780039186.01.T01:CDS
TTGATCTTCATAACCTTCGC+AGG 0.513177 7:-59339586 MsG0780039186.01.T01:CDS
GAGGAGAAAAGGAGAAGGAG+GGG 0.513481 7:+59339930 None:intergenic
GATTCATGAACACAAAATAA+GGG 0.515157 7:+59336184 None:intergenic
CCTCCACCAGCACCAAGAAA+AGG 0.520944 7:-59336570 MsG0780039186.01.T01:CDS
ACGTTGTCACGGCTAGTCCA+AGG 0.524082 7:-59339453 MsG0780039186.01.T01:CDS
TGACTTTATGTCCATTTGCA+AGG 0.526303 7:-59339227 MsG0780039186.01.T01:intron
GGTACGTGAAATATATGAAA+GGG 0.527101 7:+59339641 None:intergenic
TGGGAGGTGATAAGGTGAAT+GGG 0.527752 7:-59339399 MsG0780039186.01.T01:CDS
GCTTGCTGGTACAGATGGTA+GGG 0.530457 7:-59335998 MsG0780039186.01.T01:CDS
TAGAGTGAGGTTGAGAAGAT+GGG 0.531254 7:+59339864 None:intergenic
TGCTTGCTGGTACAGATGGT+AGG 0.534211 7:-59335999 MsG0780039186.01.T01:CDS
TCCGGAAGGAACAACTTGTA+GGG 0.535613 7:-59336331 MsG0780039186.01.T01:CDS
ATGACGTGGAGATGGTTTCA+AGG 0.541289 7:-59339552 MsG0780039186.01.T01:CDS
AGTGGCACTTTCAAGAGAAA+GGG 0.541416 7:-59336409 MsG0780039186.01.T01:CDS
AAGAATGTGATCTCATAAGT+AGG 0.541733 7:+59336156 None:intergenic
GTAGCCATAAGCATGTAGTA+AGG 0.544461 7:+59339709 None:intergenic
AGATGGGTGTGTAGTGAATG+AGG 0.544655 7:+59339880 None:intergenic
ACCATCTGTACCAGCAAGCA+TGG 0.545012 7:+59336002 None:intergenic
TGGTAGGGTTCCATCTAAGA+AGG 0.546476 7:-59335983 MsG0780039186.01.T01:CDS
GATTCCTCTTAGGAAACTAC+CGG 0.549927 7:+59339681 None:intergenic
GAAGATCAATGACGTGGAGA+TGG 0.550046 7:-59339560 MsG0780039186.01.T01:CDS
AGGTGACCTAGTGATTTGTC+CGG 0.552254 7:-59336349 MsG0780039186.01.T01:CDS
GCCATGCTTGCTGGTACAGA+TGG 0.562456 7:-59336003 MsG0780039186.01.T01:CDS
AGGTACGTGAAATATATGAA+AGG 0.567264 7:+59339640 None:intergenic
AGCTCCCCAACAAGAACACC+AGG 0.567606 7:+59339325 None:intergenic
AATGCAACTGCTGTAACCAC+AGG 0.568227 7:+59336501 None:intergenic
GTGATCTCATAAGTAGGCAC+AGG 0.573493 7:+59336162 None:intergenic
GTTATGAGGAGAAAAGGAGA+AGG 0.577169 7:+59339925 None:intergenic
ATGGTTAGAAATGTGTTATG+AGG 0.582509 7:+59339911 None:intergenic
GGTCCGCGGACACAAAGTAT+TGG 0.584467 7:-59336208 MsG0780039186.01.T01:CDS
AACAAGGCAACAATAGGTGT+TGG 0.586171 7:+59336723 None:intergenic
TGGAAAGCGTTACGTTGTCA+CGG 0.586333 7:-59339464 MsG0780039186.01.T01:CDS
CCAAATCGGGAAGGGCAACT+GGG 0.587982 7:-59339360 MsG0780039186.01.T01:CDS
TGAGGTGACCAAATCGGGAA+GGG 0.590584 7:-59339368 MsG0780039186.01.T01:CDS
AGGACGTGCGTCCTGAGACG+TGG 0.599900 7:-59339504 MsG0780039186.01.T01:CDS
GGCTAGTCCAAGGTTGATGG+TGG 0.602655 7:-59339443 MsG0780039186.01.T01:CDS
GCCATCTAAGTCAGATGCAA+CGG 0.603277 7:+59339759 None:intergenic
GAAGCCGGTAGTTTCCTAAG+AGG 0.606044 7:-59339685 MsG0780039186.01.T01:CDS
TAGCCATAAGCATGTAGTAA+GGG 0.612096 7:+59339710 None:intergenic
TGCAACCGGAACAATCCTAT+CGG 0.612877 7:+59336266 None:intergenic
ATTGATCTTCAGACCTGCGA+AGG 0.614008 7:+59339573 None:intergenic
TTCCTTCCGGACAAATCACT+AGG 0.618250 7:+59336343 None:intergenic
AATTTCACCAATTAAAGCAG+TGG 0.621079 7:-59336427 MsG0780039186.01.T01:CDS
TTGAAGTAGAAAAGGAACAA+TGG 0.621431 7:-59335953 MsG0780039186.01.T01:exon
TTGAGGTGACCAAATCGGGA+AGG 0.622614 7:-59339369 MsG0780039186.01.T01:CDS
TAGCCATAGGAATGATAACA+AGG 0.629166 7:+59336707 None:intergenic
TTTGTTAAGAATTTGTTGGG+AGG 0.632297 7:-59339415 MsG0780039186.01.T01:CDS
TTGAGTGTACTAATTTAACA+AGG 0.633129 7:-59336038 MsG0780039186.01.T01:CDS
TTATGCCAATTGGTAGCCAT+AGG 0.634303 7:+59336694 None:intergenic
CGTGAAATATATGAAAGGGA+CGG 0.648172 7:+59339645 None:intergenic
AAAGAGCTTACAGTTAGTGG+AGG 0.649872 7:-59336120 MsG0780039186.01.T01:CDS
GGTCCAATACTTTGTGTCCG+CGG 0.653361 7:+59336205 None:intergenic
CCATAAGAAAATGTAGAGTG+AGG 0.655476 7:+59339851 None:intergenic
ATGCAACTGCTGTAACCACA+GGG 0.660790 7:+59336502 None:intergenic
CAGGGTCTAAAATTGTGCGA+TGG 0.669842 7:+59336520 None:intergenic
GACCTAGTGATTTGTCCGGA+AGG 0.669947 7:-59336345 MsG0780039186.01.T01:CDS
GGTGAATGGGACTGAACTTG+AGG 0.678672 7:-59339386 MsG0780039186.01.T01:CDS
AGGTCTGAAGATCAATGACG+TGG 0.721416 7:-59339566 MsG0780039186.01.T01:CDS
GTTGCCGAAATTCTACGCTG+AGG 0.727019 7:-59339524 MsG0780039186.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTATATAATTTTAAATTT+TGG - Chr7:59337017-59337036 MsG0780039186.01.T01:intron 0.0%
!! AGTTATATGTATATATATAA+GGG + Chr7:59336941-59336960 None:intergenic 10.0%
!! CAACATTATAAATTTAATTA+AGG - Chr7:59338449-59338468 MsG0780039186.01.T01:intron 10.0%
!! CTTAATTAAATTTATAATGT+TGG + Chr7:59338451-59338470 None:intergenic 10.0%
!! TAGTTATATGTATATATATA+AGG + Chr7:59336942-59336961 None:intergenic 10.0%
!!! AAATTTAATTTCCAAATTTA+GGG - Chr7:59337690-59337709 MsG0780039186.01.T01:intron 10.0%
!!! AAGTTTTTTTTTTTTTTTGA+AGG + Chr7:59336626-59336645 None:intergenic 10.0%
!! AAAAAAGAATAATACAATAG+AGG + Chr7:59337484-59337503 None:intergenic 15.0%
!! AAAAAGAATAATACAATAGA+GGG + Chr7:59337483-59337502 None:intergenic 15.0%
!! AAAATATATTTGTGTCTAAA+TGG + Chr7:59336777-59336796 None:intergenic 15.0%
!! AAAATTGTAAACATTAAGTT+GGG + Chr7:59338108-59338127 None:intergenic 15.0%
!! ATTTGAAAACACATTAAATT+TGG + Chr7:59339867-59339886 None:intergenic 15.0%
!! CTAAATTTGGAAATTAAATT+TGG + Chr7:59337691-59337710 None:intergenic 15.0%
!! CTTACAAAAACAAATTTATA+AGG + Chr7:59337879-59337898 None:intergenic 15.0%
!! TAAAATTGTAAACATTAAGT+TGG + Chr7:59338109-59338128 None:intergenic 15.0%
!! TAACTATATAGAATTCAAAA+AGG + Chr7:59339844-59339863 None:intergenic 15.0%
!! TATTAATTCCTTAATACTTT+AGG - Chr7:59337052-59337071 MsG0780039186.01.T01:intron 15.0%
!! TCTAAATTTAAATTGATGTT+TGG - Chr7:59337356-59337375 MsG0780039186.01.T01:intron 15.0%
!!! AATTGAGCTTTTTTTTTTTT+TGG + Chr7:59338569-59338588 None:intergenic 15.0%
!!! AGGATTAAAACTTTTAATTA+TGG - Chr7:59338635-59338654 MsG0780039186.01.T01:intron 15.0%
!!! CAAATTTAATTTCCAAATTT+AGG - Chr7:59337689-59337708 MsG0780039186.01.T01:intron 15.0%
!!! TTCAACTTAATTTCTATTTT+CGG - Chr7:59337253-59337272 MsG0780039186.01.T01:intron 15.0%
!!! TTGAGCTATTTTTTTTTTTT+TGG + Chr7:59338385-59338404 None:intergenic 15.0%
!! AAAAGAATAATACAATAGAG+GGG + Chr7:59337482-59337501 None:intergenic 20.0%
!! AAACAAATTTATAAGGCAAA+AGG + Chr7:59337872-59337891 None:intergenic 20.0%
!! AAATATTGTAGTTAATGACT+TGG + Chr7:59338916-59338935 None:intergenic 20.0%
!! AAGTTGCAAATTATATTCAA+AGG - Chr7:59339682-59339701 MsG0780039186.01.T01:CDS 20.0%
!! AGTTGCAAATTATATTCAAA+GGG - Chr7:59339683-59339702 MsG0780039186.01.T01:CDS 20.0%
!! ATCACAACAAATGAAATAAA+TGG - Chr7:59337181-59337200 MsG0780039186.01.T01:intron 20.0%
!! CATAATACTTTCTATCTTAA+GGG - Chr7:59339089-59339108 MsG0780039186.01.T01:intron 20.0%
!! TGGTACAATTATAAACTATT+AGG - Chr7:59339147-59339166 MsG0780039186.01.T01:intron 20.0%
!! TTAAGAAAAGTTACTAAGAT+AGG + Chr7:59337307-59337326 None:intergenic 20.0%
!!! AATTTGAGACTTTAGATTAA+AGG + Chr7:59338806-59338825 None:intergenic 20.0%
!!! ACATTCATATGACTAATTTT+AGG - Chr7:59338171-59338190 MsG0780039186.01.T01:intron 20.0%
!!! ACATTCTATACTCTTATTTA+TGG - Chr7:59337536-59337555 MsG0780039186.01.T01:intron 20.0%
!!! AGGGTTAAAACTTTTAATTA+TGG - Chr7:59338469-59338488 MsG0780039186.01.T01:intron 20.0%
!!! ATAAATAAGAGTATAGAATG+TGG + Chr7:59337537-59337556 None:intergenic 20.0%
! AAAAAGATGCAGCAAATATA+AGG - Chr7:59339379-59339398 MsG0780039186.01.T01:CDS 25.0%
! AGGAATCAAAGTAATTGTTA+AGG - Chr7:59339167-59339186 MsG0780039186.01.T01:intron 25.0%
! ATAAATACTAACCTTGCAAA+TGG + Chr7:59336552-59336571 None:intergenic 25.0%
! ATAAGGAAATTACTTGAAGA+AGG - Chr7:59339396-59339415 MsG0780039186.01.T01:CDS 25.0%
! ATAGAAACAAAATATGGAAG+TGG + Chr7:59337435-59337454 None:intergenic 25.0%
! ATGATGTTTGGAAAATATGA+TGG + Chr7:59338412-59338431 None:intergenic 25.0%
! CAATTGAGCTAATTTCTAAT+TGG + Chr7:59338240-59338259 None:intergenic 25.0%
! CTAAAGTCTCAAATTTACAT+AGG - Chr7:59338811-59338830 MsG0780039186.01.T01:intron 25.0%
! GAAAAGTTAGGAACATATAT+AGG + Chr7:59336593-59336612 None:intergenic 25.0%
! GAGAGAATAGAAACAAAATA+TGG + Chr7:59337441-59337460 None:intergenic 25.0%
! GATTCATGAACACAAAATAA+GGG + Chr7:59339584-59339603 None:intergenic 25.0%
! GCATAATACTTTCTATCTTA+AGG - Chr7:59339088-59339107 MsG0780039186.01.T01:intron 25.0%
! GGAATCAAAGTAATTGTTAA+GGG - Chr7:59339168-59339187 MsG0780039186.01.T01:intron 25.0%
! TAGTGTTTGAAAGTAGTTAA+GGG + Chr7:59337639-59337658 None:intergenic 25.0%
! TATATACCCATTGATCAAAA+TGG - Chr7:59338041-59338060 MsG0780039186.01.T01:intron 25.0%
! TTAGTGTTTGAAAGTAGTTA+AGG + Chr7:59337640-59337659 None:intergenic 25.0%
! TTAGTTATATAAGTCATGCA+TGG - Chr7:59337664-59337683 MsG0780039186.01.T01:intron 25.0%
! TTGAGTGTACTAATTTAACA+AGG - Chr7:59339727-59339746 MsG0780039186.01.T01:CDS 25.0%
!! AAGTCCAATAATTTTTCATG+AGG - Chr7:59339002-59339021 MsG0780039186.01.T01:intron 25.0%
!! ACTTTGGAAAATATGATGTT+TGG + Chr7:59338424-59338443 None:intergenic 25.0%
!! AGTCCAATAATTTTTCATGA+GGG - Chr7:59339003-59339022 MsG0780039186.01.T01:intron 25.0%
!! CCATTTGTTAAGAATTTGTT+GGG - Chr7:59336347-59336366 MsG0780039186.01.T01:CDS 25.0%
!! TAATTTCTATTTTCGGAAGA+AGG - Chr7:59337260-59337279 MsG0780039186.01.T01:intron 25.0%
!! TATGAAGATCAACATTTTGA+TGG + Chr7:59336171-59336190 None:intergenic 25.0%
!!! ACTTTGAAATTGGTTTGAAA+TGG + Chr7:59335956-59335975 None:intergenic 25.0%
!!! ATAGAAAGTATTATGCCAAT+TGG + Chr7:59339084-59339103 None:intergenic 25.0%
!!! ATTTTGTTTCTATTCTCTCA+CGG - Chr7:59337442-59337461 MsG0780039186.01.T01:intron 25.0%
!!! GAATTGTTGTACTTTGAAAT+TGG + Chr7:59335966-59335985 None:intergenic 25.0%
!!! TATTGAGCTTTAAATTTGCA+TGG + Chr7:59338005-59338024 None:intergenic 25.0%
!!! TTATAATGTTGGTTCAACTT+CGG + Chr7:59338440-59338459 None:intergenic 25.0%
!!! TTATAATGTTGGTTCAACTT+TGG + Chr7:59338440-59338459 None:intergenic 25.0%
AAAATATGGAAGTGGAAGAA+AGG + Chr7:59337427-59337446 None:intergenic 30.0%
AAATGTGTTATGAGGAGAAA+AGG + Chr7:59335849-59335868 None:intergenic 30.0%
AAGAATGTGATCTCATAAGT+AGG + Chr7:59339612-59339631 None:intergenic 30.0%
AATACAGAGTGGCATATAAA+AGG + Chr7:59337579-59337598 None:intergenic 30.0%
AATGATAACAAGGCAACAAT+AGG + Chr7:59339051-59339070 None:intergenic 30.0%
AATTTCACCAATTAAAGCAG+TGG - Chr7:59339338-59339357 MsG0780039186.01.T01:CDS 30.0%
ACTCATGTAAGAGATATGTT+AGG - Chr7:59337910-59337929 MsG0780039186.01.T01:intron 30.0%
AGAAAAGTTACTAAGATAGG+TGG + Chr7:59337304-59337323 None:intergenic 30.0%
AGGTACGTGAAATATATGAA+AGG + Chr7:59336128-59336147 None:intergenic 30.0%
AGTGGATCACATTTAATTCT+TGG + Chr7:59338964-59338983 None:intergenic 30.0%
ATGGTTAGAAATGTGTTATG+AGG + Chr7:59335857-59335876 None:intergenic 30.0%
ATTTACATAGGTGAGAATAG+AGG - Chr7:59338823-59338842 MsG0780039186.01.T01:intron 30.0%
CACATGAGCAACAAAATATA+GGG + Chr7:59337772-59337791 None:intergenic 30.0%
CCCAACAAATTCTTAACAAA+TGG + Chr7:59336350-59336369 None:intergenic 30.0%
CTACCCTCATGAAAAATTAT+TGG + Chr7:59339009-59339028 None:intergenic 30.0%
GAAAAAGCTTGAAGTAGAAA+AGG - Chr7:59339804-59339823 MsG0780039186.01.T01:CDS 30.0%
GATCTATAAAGCCCTAAATT+TGG + Chr7:59337704-59337723 None:intergenic 30.0%
GGATTCATGAACACAAAATA+AGG + Chr7:59339585-59339604 None:intergenic 30.0%
GGTACGTGAAATATATGAAA+GGG + Chr7:59336127-59336146 None:intergenic 30.0%
TACGTTGAATGAGATTAAGT+AGG - Chr7:59337837-59337856 MsG0780039186.01.T01:intron 30.0%
TCACATGAGCAACAAAATAT+AGG + Chr7:59337773-59337792 None:intergenic 30.0%
TGAATGAGATTAAGTAGGAA+CGG - Chr7:59337842-59337861 MsG0780039186.01.T01:intron 30.0%
TGTTGTGATCTTAAAAACCA+TGG + Chr7:59337170-59337189 None:intergenic 30.0%
TTATGACTTATAAGAGAGAG+AGG + Chr7:59337616-59337635 None:intergenic 30.0%
TTCAACTTCGGAAAATATGA+TGG + Chr7:59338594-59338613 None:intergenic 30.0%
TTGAAGTAGAAAAGGAACAA+TGG - Chr7:59339812-59339831 MsG0780039186.01.T01:CDS 30.0%
! AAGTGTGTTTTATGGTACAA+CGG - Chr7:59339536-59339555 MsG0780039186.01.T01:CDS 30.0%
! ACGAAACAAAGTGTGTTTTA+TGG - Chr7:59339528-59339547 MsG0780039186.01.T01:CDS 30.0%
! AGTGAATGAGGTATTTAGAA+TGG + Chr7:59335876-59335895 None:intergenic 30.0%
! ATAAGAGTATAGAATGTGGA+TGG + Chr7:59337533-59337552 None:intergenic 30.0%
! CTACATTTTCTTATGGTCAT+GGG - Chr7:59335921-59335940 MsG0780039186.01.T01:three_prime_UTR 30.0%
! GCCATTTGTTAAGAATTTGT+TGG - Chr7:59336346-59336365 MsG0780039186.01.T01:CDS 30.0%
! GGAGTATTTGAAGAAAAGTT+AGG + Chr7:59336605-59336624 None:intergenic 30.0%
! TCTACATTTTCTTATGGTCA+TGG - Chr7:59335920-59335939 MsG0780039186.01.T01:three_prime_UTR 30.0%
! TGGAATGTGTTCAATTCTTT+TGG - Chr7:59336281-59336300 MsG0780039186.01.T01:CDS 30.0%
! TGTGATGTCCTAAAGTATTA+AGG + Chr7:59337063-59337082 None:intergenic 30.0%
! TTGTCCAAGATTTTCTTTGA+GGG - Chr7:59336719-59336738 MsG0780039186.01.T01:CDS 30.0%
! TTTGGATTTTATGTTCGAAG+TGG + Chr7:59337749-59337768 None:intergenic 30.0%
! TTTGTCCAAGATTTTCTTTG+AGG - Chr7:59336718-59336737 MsG0780039186.01.T01:CDS 30.0%
! TTTTATATAGTTGTGCATGC+TGG - Chr7:59338124-59338143 MsG0780039186.01.T01:intron 30.0%
!! AACCATCCATTTTGATCAAT+GGG + Chr7:59338050-59338069 None:intergenic 30.0%
!! TTTGTTAAGAATTTGTTGGG+AGG - Chr7:59336350-59336369 MsG0780039186.01.T01:CDS 30.0%
!!! CAAGCAATTTTTTCTGGTAA+GGG + Chr7:59339129-59339148 None:intergenic 30.0%
!!! TTGTACCAAGCAATTTTTTC+TGG + Chr7:59339135-59339154 None:intergenic 30.0%
AACACCCTCAAAGAAAATCT+TGG + Chr7:59336726-59336745 None:intergenic 35.0%
AATATTTACCACCATGCATG+TGG - Chr7:59337506-59337525 MsG0780039186.01.T01:intron 35.0%
ATAAAGTCACACACACAAAG+TGG + Chr7:59338336-59338355 None:intergenic 35.0%
ATCTTAACGTTGTACAGTTG+TGG - Chr7:59337143-59337162 MsG0780039186.01.T01:intron 35.0%
ATCTTCCTATACTCAACCAA+GGG - Chr7:59338073-59338092 MsG0780039186.01.T01:intron 35.0%
ATTAACCGATAGGATTGTTC+CGG - Chr7:59339494-59339513 MsG0780039186.01.T01:CDS 35.0%
ATTCCCTTACTACATGCTTA+TGG - Chr7:59336052-59336071 MsG0780039186.01.T01:CDS 35.0%
CAATCAAACGACTTTCAATG+AGG + Chr7:59337977-59337996 None:intergenic 35.0%
CCATAAGAAAATGTAGAGTG+AGG + Chr7:59335917-59335936 None:intergenic 35.0%
CCTTACCAGAAAAAATTGCT+TGG - Chr7:59339127-59339146 MsG0780039186.01.T01:intron 35.0%
CGTGAAATATATGAAAGGGA+CGG + Chr7:59336123-59336142 None:intergenic 35.0%
GAGCAACAAAATATAGGGTT+TGG + Chr7:59337767-59337786 None:intergenic 35.0%
GGTTATACGATGATAAGCTA+TGG + Chr7:59337956-59337975 None:intergenic 35.0%
TACCCATTGATCAAAATGGA+TGG - Chr7:59338045-59338064 MsG0780039186.01.T01:intron 35.0%
TACTCAACTGAAATACAGAG+TGG + Chr7:59337590-59337609 None:intergenic 35.0%
TAGCCATAAGCATGTAGTAA+GGG + Chr7:59336058-59336077 None:intergenic 35.0%
TAGCCATAGGAATGATAACA+AGG + Chr7:59339061-59339080 None:intergenic 35.0%
TATATTCAAAGGGTTCTTGC+TGG - Chr7:59339693-59339712 MsG0780039186.01.T01:CDS 35.0%
TGACTATGACATGTTGCTAT+TGG - Chr7:59337391-59337410 MsG0780039186.01.T01:intron 35.0%
TGACTTTATGTCCATTTGCA+AGG - Chr7:59336538-59336557 MsG0780039186.01.T01:CDS 35.0%
TGTTTCGTGTTAATTGCAAC+CGG + Chr7:59339516-59339535 None:intergenic 35.0%
TTGCTCATGTGAAAGATACA+AGG - Chr7:59337781-59337800 MsG0780039186.01.T01:intron 35.0%
! AATATTTTCCTCTGCAGGAA+GGG - Chr7:59338929-59338948 MsG0780039186.01.T01:intron 35.0%
! ACACCTTTTTGACCTTTTCT+TGG + Chr7:59339210-59339229 None:intergenic 35.0%
! ACTACAATATTTTCCTCTGC+AGG - Chr7:59338924-59338943 MsG0780039186.01.T01:intron 35.0%
! CAGTCTAATTTGCCTGATTT+GGG - Chr7:59336491-59336510 MsG0780039186.01.T01:CDS 35.0%
! CCTCACTCTACATTTTCTTA+TGG - Chr7:59335914-59335933 MsG0780039186.01.T01:three_prime_UTR 35.0%
! TCAGTCTAATTTGCCTGATT+TGG - Chr7:59336490-59336509 MsG0780039186.01.T01:CDS 35.0%
! TTGCCTTGTTATCATTCCTA+TGG - Chr7:59339055-59339074 MsG0780039186.01.T01:intron 35.0%
! TTGTGATGATGCTCATGAAA+TGG - Chr7:59339919-59339938 MsG0780039186.01.T01:five_prime_UTR 35.0%
! TTTCTGGTAAGGGAATGTTT+AGG + Chr7:59339119-59339138 None:intergenic 35.0%
! TTTTCGCTGAATTAACCGAT+AGG - Chr7:59339484-59339503 MsG0780039186.01.T01:CDS 35.0%
!! AGAAGTTTAGTTCTTGGTAG+TGG + Chr7:59338982-59339001 None:intergenic 35.0%
!! AGGGGTTTTTAAAAGGAGTT+GGG + Chr7:59335820-59335839 None:intergenic 35.0%
!! CAACCATCCATTTTGATCAA+TGG + Chr7:59338051-59338070 None:intergenic 35.0%
!! CAAGCTTTTTCCTTCTTAGA+TGG + Chr7:59339795-59339814 None:intergenic 35.0%
!! GGACTTAGAAGTTTAGTTCT+TGG + Chr7:59338988-59339007 None:intergenic 35.0%
!! GTAAACATTAAGTTGGGACA+TGG + Chr7:59338102-59338121 None:intergenic 35.0%
!! TAGGTGGATTGAGTCATAAT+TGG + Chr7:59337288-59337307 None:intergenic 35.0%
!!! CCAAGCAATTTTTTCTGGTA+AGG + Chr7:59339130-59339149 None:intergenic 35.0%
AAAGAGCTTACAGTTAGTGG+AGG - Chr7:59339645-59339664 MsG0780039186.01.T01:CDS 40.0%
AACAAGGCAACAATAGGTGT+TGG + Chr7:59339045-59339064 None:intergenic 40.0%
ACGATGATAAGCTATGGTTG+TGG + Chr7:59337950-59337969 None:intergenic 40.0%
AGGTGATGTGTGACATGTAT+CGG + Chr7:59338786-59338805 None:intergenic 40.0%
AGTGGAAGAAAGGCTCATTA+TGG + Chr7:59337417-59337436 None:intergenic 40.0%
AGTGGCACTTTCAAGAGAAA+GGG - Chr7:59339356-59339375 MsG0780039186.01.T01:CDS 40.0%
ATGAGATTAAGTAGGAACGG+TGG - Chr7:59337845-59337864 MsG0780039186.01.T01:intron 40.0%
CCACTAACTGTAAGCTCTTT+AGG + Chr7:59339645-59339664 None:intergenic 40.0%
CCTAAAGAGCTTACAGTTAG+TGG - Chr7:59339642-59339661 MsG0780039186.01.T01:CDS 40.0%
GACGTTCGGTCTAACAATTT+CGG + Chr7:59338286-59338305 None:intergenic 40.0%
GATCTTCCTATACTCAACCA+AGG - Chr7:59338072-59338091 MsG0780039186.01.T01:intron 40.0%
GATTCCTCTTAGGAAACTAC+CGG + Chr7:59336087-59336106 None:intergenic 40.0%
GCACCAAGAAAAGGTCAAAA+AGG - Chr7:59339204-59339223 MsG0780039186.01.T01:intron 40.0%
GTAAGAGGATGATTCCTCTT+AGG + Chr7:59336097-59336116 None:intergenic 40.0%
GTAGATAGACGAGATGACAA+AGG + Chr7:59338363-59338382 None:intergenic 40.0%
GTAGCCATAAGCATGTAGTA+AGG + Chr7:59336059-59336078 None:intergenic 40.0%
GTAGGGAACCATTTCTTCTA+CGG - Chr7:59339451-59339470 MsG0780039186.01.T01:CDS 40.0%
GTTATGAGGAGAAAAGGAGA+AGG + Chr7:59335843-59335862 None:intergenic 40.0%
TAGAGTGAGGTTGAGAAGAT+GGG + Chr7:59335904-59335923 None:intergenic 40.0%
TCATTCCTATGGCTACCAAT+TGG - Chr7:59339066-59339085 MsG0780039186.01.T01:intron 40.0%
TGAACTTGAGGTGACCAAAT+CGG - Chr7:59336391-59336410 MsG0780039186.01.T01:CDS 40.0%
TTGATCTTCATAACCTTCGC+AGG - Chr7:59336179-59336198 MsG0780039186.01.T01:CDS 40.0%
! CAATATTTTCCTCTGCAGGA+AGG - Chr7:59338928-59338947 MsG0780039186.01.T01:intron 40.0%
! GAGAAGGAGGGGTTTTTAAA+AGG + Chr7:59335827-59335846 None:intergenic 40.0%
! GCATTTTTACCAGTTGAGCT+AGG + Chr7:59338264-59338283 None:intergenic 40.0%
! TTATGCCAATTGGTAGCCAT+AGG + Chr7:59339074-59339093 None:intergenic 40.0%
!! AATTTGCCTGATTTGGGACT+GGG - Chr7:59336497-59336516 MsG0780039186.01.T01:CDS 40.0%
!! CGATGGTTTCTGAGACAAAA+AGG + Chr7:59336148-59336167 None:intergenic 40.0%
!! GAAAGTGCCACTGCTTTAAT+TGG + Chr7:59339348-59339367 None:intergenic 40.0%
!! GAATTTGTTGGGAGGTGATA+AGG - Chr7:59336358-59336377 MsG0780039186.01.T01:CDS 40.0%
!! GAGGGGTTTTTAAAAGGAGT+TGG + Chr7:59335821-59335840 None:intergenic 40.0%
!! GGGGTTTTTAAAAGGAGTTG+GGG + Chr7:59335819-59335838 None:intergenic 40.0%
!! GGGTTTTTAAAAGGAGTTGG+GGG + Chr7:59335818-59335837 None:intergenic 40.0%
!! GGTTTTTAAAAGGAGTTGGG+GGG + Chr7:59335817-59335836 None:intergenic 40.0%
!! TAATTTGCCTGATTTGGGAC+TGG - Chr7:59336496-59336515 MsG0780039186.01.T01:CDS 40.0%
!! TTTTGACCTTTTCTTGGTGC+TGG + Chr7:59339204-59339223 None:intergenic 40.0%
!!! GATCAACATTTTGATGGCGA+TGG + Chr7:59336165-59336184 None:intergenic 40.0%
AAGTCACACACACAAAGTGG+AGG + Chr7:59338333-59338352 None:intergenic 45.0%
AATGCAACTGCTGTAACCAC+AGG + Chr7:59339267-59339286 None:intergenic 45.0%
ACCGTTGCATCTGACTTAGA+TGG - Chr7:59336005-59336024 MsG0780039186.01.T01:CDS 45.0%
ACGTCCTCAGCGTAGAATTT+CGG + Chr7:59336248-59336267 None:intergenic 45.0%
AGATGGGTGTGTAGTGAATG+AGG + Chr7:59335888-59335907 None:intergenic 45.0%
AGGTCTGAAGATCAATGACG+TGG - Chr7:59336199-59336218 MsG0780039186.01.T01:CDS 45.0%
ATGACGTGGAGATGGTTTCA+AGG - Chr7:59336213-59336232 MsG0780039186.01.T01:CDS 45.0%
ATGAGGAGAAAAGGAGAAGG+AGG + Chr7:59335840-59335859 None:intergenic 45.0%
ATGCAACTGCTGTAACCACA+GGG + Chr7:59339266-59339285 None:intergenic 45.0%
ATTGATCTTCAGACCTGCGA+AGG + Chr7:59336195-59336214 None:intergenic 45.0%
CAGTGGCACTTTCAAGAGAA+AGG - Chr7:59339355-59339374 MsG0780039186.01.T01:CDS 45.0%
CTAAGTCAGATGCAACGGTT+TGG + Chr7:59336004-59336023 None:intergenic 45.0%
CTCAATTGTCCTAGCTCAAC+TGG - Chr7:59338252-59338271 MsG0780039186.01.T01:intron 45.0%
GAACTTGAGGTGACCAAATC+GGG - Chr7:59336392-59336411 MsG0780039186.01.T01:CDS 45.0%
GAAGATCAATGACGTGGAGA+TGG - Chr7:59336205-59336224 MsG0780039186.01.T01:CDS 45.0%
GATAAGTATGCCATGCTTGC+TGG - Chr7:59339753-59339772 MsG0780039186.01.T01:CDS 45.0%
GCCATCTAAGTCAGATGCAA+CGG + Chr7:59336009-59336028 None:intergenic 45.0%
GGATTCCCTTGGTTGAGTAT+AGG + Chr7:59338081-59338100 None:intergenic 45.0%
GTAGAGTGAGGTTGAGAAGA+TGG + Chr7:59335905-59335924 None:intergenic 45.0%
GTGATCTCATAAGTAGGCAC+AGG + Chr7:59339606-59339625 None:intergenic 45.0%
GTGGTTACAGCAGTTGCATT+AGG - Chr7:59339267-59339286 MsG0780039186.01.T01:CDS 45.0%
TCCCTACAAGTTGTTCCTTC+CGG + Chr7:59339438-59339457 None:intergenic 45.0%
TCCGGAAGGAACAACTTGTA+GGG - Chr7:59339434-59339453 MsG0780039186.01.T01:CDS 45.0%
TGAGGAGAAAAGGAGAAGGA+GGG + Chr7:59335839-59335858 None:intergenic 45.0%
TGCAACCGGAACAATCCTAT+CGG + Chr7:59339502-59339521 None:intergenic 45.0%
TGGGAGGTGATAAGGTGAAT+GGG - Chr7:59336366-59336385 MsG0780039186.01.T01:CDS 45.0%
TGGTAGGGTTCCATCTAAGA+AGG - Chr7:59339782-59339801 MsG0780039186.01.T01:CDS 45.0%
TTCCTTCCGGACAAATCACT+AGG + Chr7:59339425-59339444 None:intergenic 45.0%
TTGAACACATTCCACGTCTC+AGG + Chr7:59336275-59336294 None:intergenic 45.0%
TTGGGAGGTGATAAGGTGAA+TGG - Chr7:59336365-59336384 MsG0780039186.01.T01:CDS 45.0%
! AGGTGACCTAGTGATTTGTC+CGG - Chr7:59339416-59339435 MsG0780039186.01.T01:CDS 45.0%
! CAGGGTCTAAAATTGTGCGA+TGG + Chr7:59339248-59339267 None:intergenic 45.0%
! TCGCACAATTTTAGACCCTG+TGG - Chr7:59339248-59339267 MsG0780039186.01.T01:CDS 45.0%
! TTTTATGGTACAACGGTCCG+CGG - Chr7:59339543-59339562 MsG0780039186.01.T01:CDS 45.0%
!! AAGGGCAACTGGGTTTGTTA+AGG - Chr7:59336415-59336434 MsG0780039186.01.T01:CDS 45.0%
!! TCTTAGGAAACTACCGGCTT+CGG + Chr7:59336081-59336100 None:intergenic 45.0%
!! TGGAAAGCGTTACGTTGTCA+CGG - Chr7:59336301-59336320 MsG0780039186.01.T01:CDS 45.0%
!! AACATTATAAATTTAATTAA+GGG - Chr7:59338450-59338469 MsG0780039186.01.T01:intron 5.0%
AAGGAGCCTGGTGTTCTTGT+TGG - Chr7:59336434-59336453 MsG0780039186.01.T01:CDS 50.0%
AATGGCTCCACCATCAACCT+TGG + Chr7:59336332-59336351 None:intergenic 50.0%
ACCATATACCCTTCCTGCAG+AGG + Chr7:59338940-59338959 None:intergenic 50.0%
ACCATCTGTACCAGCAAGCA+TGG + Chr7:59339766-59339785 None:intergenic 50.0%
AGGAGCCTGGTGTTCTTGTT+GGG - Chr7:59336435-59336454 MsG0780039186.01.T01:CDS 50.0%
AGGGTTCTTGCTGGAACACT+TGG - Chr7:59339702-59339721 MsG0780039186.01.T01:CDS 50.0%
AGTTGGGACATGGATTCCCT+TGG + Chr7:59338092-59338111 None:intergenic 50.0%
ATGCTTATGGCTACCGAAGC+CGG - Chr7:59336065-59336084 MsG0780039186.01.T01:CDS 50.0%
ATGTGGATGGACCACATGCA+TGG + Chr7:59337520-59337539 None:intergenic 50.0%
CGTTGTACAGTTGTGGACCA+TGG - Chr7:59337150-59337169 MsG0780039186.01.T01:intron 50.0%
CTATCTCCCAGTCCCAAATC+AGG + Chr7:59336506-59336525 None:intergenic 50.0%
GAAGCCGGTAGTTTCCTAAG+AGG - Chr7:59336080-59336099 MsG0780039186.01.T01:CDS 50.0%
GAGGAGAAAAGGAGAAGGAG+GGG + Chr7:59335838-59335857 None:intergenic 50.0%
GCGCTGAACCGTAGAAGAAA+TGG + Chr7:59339462-59339481 None:intergenic 50.0%
GGTCCAATACTTTGTGTCCG+CGG + Chr7:59339563-59339582 None:intergenic 50.0%
GGTGAATGGGACTGAACTTG+AGG - Chr7:59336379-59336398 MsG0780039186.01.T01:CDS 50.0%
GTCCGGAAGGAACAACTTGT+AGG - Chr7:59339433-59339452 MsG0780039186.01.T01:CDS 50.0%
GTTAGACCGAACGTCATGAC+CGG - Chr7:59338291-59338310 MsG0780039186.01.T01:intron 50.0%
GTTGCCGAAATTCTACGCTG+AGG - Chr7:59336241-59336260 MsG0780039186.01.T01:CDS 50.0%
TGAAAGGGACGGAGAGTAAG+AGG + Chr7:59336112-59336131 None:intergenic 50.0%
TGAGGTGACCAAATCGGGAA+GGG - Chr7:59336397-59336416 MsG0780039186.01.T01:CDS 50.0%
TTAGACCGAACGTCATGACC+GGG - Chr7:59338292-59338311 MsG0780039186.01.T01:intron 50.0%
TTGAGGTGACCAAATCGGGA+AGG - Chr7:59336396-59336415 MsG0780039186.01.T01:CDS 50.0%
! CACACACAAAGTGGAGGTAC+CGG + Chr7:59338327-59338346 None:intergenic 50.0%
! GACCTAGTGATTTGTCCGGA+AGG - Chr7:59339420-59339439 MsG0780039186.01.T01:CDS 50.0%
! GCTTGCTGGTACAGATGGTA+GGG - Chr7:59339767-59339786 MsG0780039186.01.T01:CDS 50.0%
! TCCTCTGCAGGAAGGGTATA+TGG - Chr7:59338936-59338955 MsG0780039186.01.T01:intron 50.0%
! TGCTTGCTGGTACAGATGGT+AGG - Chr7:59339766-59339785 MsG0780039186.01.T01:CDS 50.0%
!! ACACACAAAGTGGAGGTACC+GGG + Chr7:59338326-59338345 None:intergenic 50.0%
!! ACTGGGTTTGTTAAGGAGCC+TGG - Chr7:59336422-59336441 MsG0780039186.01.T01:CDS 50.0%
!!! CTTTTCTTGGTGCTGGTGGA+GGG + Chr7:59339197-59339216 None:intergenic 50.0%
!!! TGACCTTTTCTTGGTGCTGG+TGG + Chr7:59339201-59339220 None:intergenic 50.0%
!!! TTTTCTTGGTGCTGGTGGAG+GGG + Chr7:59339196-59339215 None:intergenic 50.0%
ACCAAATCGGGAAGGGCAAC+TGG - Chr7:59336404-59336423 MsG0780039186.01.T01:CDS 55.0%
AGCTCCCCAACAAGAACACC+AGG + Chr7:59336443-59336462 None:intergenic 55.0%
CCAAATCGGGAAGGGCAACT+GGG - Chr7:59336405-59336424 MsG0780039186.01.T01:CDS 55.0%
CCTCCACCAGCACCAAGAAA+AGG - Chr7:59339195-59339214 MsG0780039186.01.T01:intron 55.0%
GGAGCCTGGTGTTCTTGTTG+GGG - Chr7:59336436-59336455 MsG0780039186.01.T01:CDS 55.0%
GGTCCGCGGACACAAAGTAT+TGG - Chr7:59339557-59339576 MsG0780039186.01.T01:CDS 55.0%
TAGACCGAACGTCATGACCG+GGG - Chr7:59338293-59338312 MsG0780039186.01.T01:intron 55.0%
TGGATGGACCACATGCATGG+TGG + Chr7:59337517-59337536 None:intergenic 55.0%
! ACGTTGTCACGGCTAGTCCA+AGG - Chr7:59336312-59336331 MsG0780039186.01.T01:CDS 55.0%
! CACGGCTAGTCCAAGGTTGA+TGG - Chr7:59336319-59336338 MsG0780039186.01.T01:CDS 55.0%
! GCCATGCTTGCTGGTACAGA+TGG - Chr7:59339762-59339781 MsG0780039186.01.T01:CDS 55.0%
!! CACACAAAGTGGAGGTACCG+GGG + Chr7:59338325-59338344 None:intergenic 55.0%
!! GGCTAGTCCAAGGTTGATGG+TGG - Chr7:59336322-59336341 MsG0780039186.01.T01:CDS 55.0%
!!! CCTTTTCTTGGTGCTGGTGG+AGG + Chr7:59339198-59339217 None:intergenic 55.0%
CCCAGTTGCCCTTCCCGATT+TGG + Chr7:59336408-59336427 None:intergenic 60.0%
CGAACCCCGGTCATGACGTT+CGG + Chr7:59338300-59338319 None:intergenic 60.0%
AGGACGTGCGTCCTGAGACG+TGG - Chr7:59336261-59336280 MsG0780039186.01.T01:CDS 65.0%
CATGACCGGGGTTCGAACCC+CGG - Chr7:59338305-59338324 MsG0780039186.01.T01:intron 65.0%
!! AGGTACCGGGGTTCGAACCC+CGG + Chr7:59338313-59338332 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 59335794 59339993 59335794 ID=MsG0780039186.01;Name=MsG0780039186.01
Chr7 mRNA 59335794 59339993 59335794 ID=MsG0780039186.01.T01;Parent=MsG0780039186.01;Name=MsG0780039186.01.T01;_AED=0.33;_eAED=0.33;_QI=139|1|1|1|1|1|2|178|498
Chr7 exon 59335794 59336841 59335794 ID=MsG0780039186.01.T01:exon:6976;Parent=MsG0780039186.01.T01
Chr7 exon 59339228 59339993 59339228 ID=MsG0780039186.01.T01:exon:6975;Parent=MsG0780039186.01.T01
Chr7 five_prime_UTR 59339855 59339993 59339855 ID=MsG0780039186.01.T01:five_prime_utr;Parent=MsG0780039186.01.T01
Chr7 CDS 59339228 59339854 59339228 ID=MsG0780039186.01.T01:cds;Parent=MsG0780039186.01.T01
Chr7 CDS 59335972 59336841 59335972 ID=MsG0780039186.01.T01:cds;Parent=MsG0780039186.01.T01
Chr7 three_prime_UTR 59335794 59335971 59335794 ID=MsG0780039186.01.T01:three_prime_utr;Parent=MsG0780039186.01.T01
Gene Sequence

>MsG0780039186.01.T01

ATGGTCATGGGAGCATTTCACCATTTCAAACCAATTTCAAAGTACAACAATTCACAAGATAAATCAAACCAAACCGTTGCATCTGACTTAGATGGCACACTTCTTGTATCTAGAGATGCATTCCCTTACTACATGCTTATGGCTACCGAAGCCGGTAGTTTCCTAAGAGGAATCATCCTCTTACTCTCCGTCCCTTTCATATATTTCACGTACCTTTTTGTCTCAGAAACCATCGCCATCAAAATGTTGATCTTCATAACCTTCGCAGGTCTGAAGATCAATGACGTGGAGATGGTTTCAAGGTCAGTGTTGCCGAAATTCTACGCTGAGGACGTGCGTCCTGAGACGTGGAATGTGTTCAATTCTTTTGGAAAGCGTTACGTTGTCACGGCTAGTCCAAGGTTGATGGTGGAGCCATTTGTTAAGAATTTGTTGGGAGGTGATAAGGTGAATGGGACTGAACTTGAGGTGACCAAATCGGGAAGGGCAACTGGGTTTGTTAAGGAGCCTGGTGTTCTTGTTGGGGAGCTCAAGAAAGATGCTGTTGTCAAAGAGTTTCAGTCTAATTTGCCTGATTTGGGACTGGGAGATAGTGAAAGTGATCATGACTTTATGTCCATTTGCAAGGAAGGGTATATGGTTCCAAGAATTAAATGTGATCCACTACCAAGAACTAAACTTCTAAGTCCAATAATTTTTCATGAGGGTAGATTTGTTCAACGACCAACACCTATTGTTGCCTTGTTATCATTCCTATGGCTACCAATTGGCATAATACTTTCTATCTTAAGGGTATACCTAAACATTCCCTTACCAGAAAAAATTGCTTGGTACAATTATAAACTATTAGGAATCAAAGTAATTGTTAAGGGTACCCCTCCACCAGCACCAAGAAAAGGTCAAAAAGGTGTATTATTTGTGTGTAACCATCGCACAATTTTAGACCCTGTGGTTACAGCAGTTGCATTAGGAAGAAAAATTAGTTGTGTCACATATAGTATTAGTAAATTTAGTGAAATAATTTCACCAATTAAAGCAGTGGCACTTTCAAGAGAAAGGGAAAAAGATGCAGCAAATATAAGGAAATTACTTGAAGAAGGTGACCTAGTGATTTGTCCGGAAGGAACAACTTGTAGGGAACCATTTCTTCTACGGTTCAGCGCGCTTTTCGCTGAATTAACCGATAGGATTGTTCCGGTTGCAATTAACACGAAACAAAGTGTGTTTTATGGTACAACGGTCCGCGGACACAAAGTATTGGACCCTTATTTTGTGTTCATGAATCCTGTGCCTACTTATGAGATCACATTCTTGAATCAACTTCCTAAAGAGCTTACAGTTAGTGGAGGAAAATCTGCTATTGAAGTTGCAAATTATATTCAAAGGGTTCTTGCTGGAACACTTGGATTTGAGTGTACTAATTTAACAAGGAAAGATAAGTATGCCATGCTTGCTGGTACAGATGGTAGGGTTCCATCTAAGAAGGAAAAAGCTTGA

Protein sequence

>MsG0780039186.01.T01

MVMGAFHHFKPISKYNNSQDKSNQTVASDLDGTLLVSRDAFPYYMLMATEAGSFLRGIILLLSVPFIYFTYLFVSETIAIKMLIFITFAGLKINDVEMVSRSVLPKFYAEDVRPETWNVFNSFGKRYVVTASPRLMVEPFVKNLLGGDKVNGTELEVTKSGRATGFVKEPGVLVGELKKDAVVKEFQSNLPDLGLGDSESDHDFMSICKEGYMVPRIKCDPLPRTKLLSPIIFHEGRFVQRPTPIVALLSFLWLPIGIILSILRVYLNIPLPEKIAWYNYKLLGIKVIVKGTPPPAPRKGQKGVLFVCNHRTILDPVVTAVALGRKISCVTYSISKFSEIISPIKAVALSREREKDAANIRKLLEEGDLVICPEGTTCREPFLLRFSALFAELTDRIVPVAINTKQSVFYGTTVRGHKVLDPYFVFMNPVPTYEITFLNQLPKELTVSGGKSAIEVANYIQRVLAGTLGFECTNLTRKDKYAMLAGTDGRVPSKKEKA*