Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042890.01.T01 | XP_013444538.1 | 90.05 | 402 | 3 | 1 | 1 | 402 | 1 | 365 | 0 | 723 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042890.01.T01 | Q700E4 | 39.48 | 423 | 158 | 11 | 1 | 395 | 1 | 353 | 1.18E-73 | 236 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042890.01.T01 | A0A072TNY8 | 90.050 | 402 | 3 | 1 | 1 | 402 | 1 | 365 | 0.0 | 723 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0880042890.01.T01 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047899.01 | MsG0880042890.01 | 0.812101 | 5.021042e-51 | 3.163506e-48 |
| MsG0080047910.01 | MsG0880042890.01 | 0.815823 | 7.589417e-52 | 5.287895e-49 |
| MsG0080047945.01 | MsG0880042890.01 | 0.817729 | 2.834788e-52 | 2.081059e-49 |
| MsG0080047955.01 | MsG0880042890.01 | 0.838869 | 2.225237e-57 | 3.019944e-54 |
| MsG0080047956.01 | MsG0880042890.01 | 0.818034 | 2.419343e-52 | 1.790865e-49 |
| MsG0080048068.01 | MsG0880042890.01 | 0.800509 | 1.394247e-48 | 6.503575e-46 |
| MsG0080048727.01 | MsG0880042890.01 | 0.846337 | 2.314239e-59 | 3.970051e-56 |
| MsG0080048773.01 | MsG0880042890.01 | 0.887099 | 1.920961e-72 | 1.409248e-68 |
| MsG0080048777.01 | MsG0880042890.01 | 0.864929 | 8.532960e-65 | 2.725852e-61 |
| MsG0080048780.01 | MsG0880042890.01 | 0.873894 | 1.031908e-67 | 4.552041e-64 |
| MsG0080048801.01 | MsG0880042890.01 | 0.861551 | 9.478729e-64 | 2.692329e-60 |
| MsG0080048802.01 | MsG0880042890.01 | 0.827256 | 1.729846e-54 | 1.661254e-51 |
| MsG0080048820.01 | MsG0880042890.01 | 0.819855 | 9.327017e-53 | 7.261565e-50 |
| MsG0080048845.01 | MsG0880042890.01 | 0.831870 | 1.306430e-55 | 1.436139e-52 |
| MsG0080048876.01 | MsG0880042890.01 | 0.899542 | 1.787095e-77 | 2.220323e-73 |
| MsG0080048878.01 | MsG0880042890.01 | 0.812374 | 4.377424e-51 | 2.778451e-48 |
| MsG0080048925.01 | MsG0880042890.01 | 0.802370 | 5.794643e-49 | 2.833708e-46 |
| MsG0080049004.01 | MsG0880042890.01 | 0.829346 | 5.420292e-55 | 5.533211e-52 |
| MsG0080049029.01 | MsG0880042890.01 | 0.865898 | 4.226343e-65 | 1.397687e-61 |
| MsG0080049039.01 | MsG0880042890.01 | 0.887860 | 9.840805e-73 | 7.443479e-69 |
| MsG0080049040.01 | MsG0880042890.01 | 0.914391 | 2.024712e-84 | 5.018612e-80 |
| MsG0080049054.01 | MsG0880042890.01 | 0.821985 | 3.017828e-53 | 2.493367e-50 |
| MsG0080049063.01 | MsG0880042890.01 | 0.836716 | 7.947603e-57 | 1.009982e-53 |
| MsG0080049068.01 | MsG0880042890.01 | 0.901249 | 3.242651e-78 | 4.343217e-74 |
| MsG0080049078.01 | MsG0880042890.01 | 0.823625 | 1.252175e-53 | 1.083941e-50 |
| MsG0080049130.01 | MsG0880042890.01 | 0.805182 | 1.510432e-49 | 7.938576e-47 |
| MsG0180000113.01 | MsG0880042890.01 | 0.806602 | 7.596817e-50 | 4.140584e-47 |
| MsG0180000188.01 | MsG0880042890.01 | -0.815372 | 9.564239e-52 | 6.582105e-49 |
| MsG0180000292.01 | MsG0880042890.01 | 0.845629 | 3.605233e-59 | 6.044964e-56 |
| MsG0180000354.01 | MsG0880042890.01 | 0.847401 | 1.183798e-59 | 2.101612e-56 |
| MsG0180000355.01 | MsG0880042890.01 | 0.822726 | 2.030549e-53 | 1.713605e-50 |
| MsG0180000599.01 | MsG0880042890.01 | 0.801370 | 9.297621e-49 | 4.432685e-46 |
| MsG0180000638.01 | MsG0880042890.01 | 0.830982 | 2.161306e-55 | 2.313934e-52 |
| MsG0180000670.01 | MsG0880042890.01 | 0.874334 | 7.327672e-68 | 3.285443e-64 |
| MsG0180000671.01 | MsG0880042890.01 | 0.875439 | 3.079991e-68 | 1.437915e-64 |
| MsG0180000677.01 | MsG0880042890.01 | 0.885063 | 1.122767e-71 | 7.594599e-68 |
| MsG0180000678.01 | MsG0880042890.01 | 0.863493 | 2.393799e-64 | 7.270174e-61 |
| MsG0180000785.01 | MsG0880042890.01 | 0.816036 | 6.799785e-52 | 4.765817e-49 |
| MsG0180000792.01 | MsG0880042890.01 | 0.814616 | 1.407400e-51 | 9.488992e-49 |
| MsG0180000843.01 | MsG0880042890.01 | 0.821048 | 4.965379e-53 | 3.996497e-50 |
| MsG0180000878.01 | MsG0880042890.01 | 0.879217 | 1.492241e-69 | 8.024448e-66 |
| MsG0180000989.01 | MsG0880042890.01 | 0.818978 | 1.478208e-52 | 1.123266e-49 |
| MsG0180001064.01 | MsG0880042890.01 | 0.806312 | 8.743378e-50 | 4.730457e-47 |
| MsG0180001085.01 | MsG0880042890.01 | 0.897612 | 1.187324e-76 | 1.352234e-72 |
| MsG0180001105.01 | MsG0880042890.01 | 0.820606 | 6.276260e-53 | 4.988897e-50 |
| MsG0180001170.01 | MsG0880042890.01 | 0.832302 | 1.021663e-55 | 1.137171e-52 |
| MsG0180001175.01 | MsG0880042890.01 | 0.904183 | 1.601612e-79 | 2.449042e-75 |
| MsG0180001270.01 | MsG0880042890.01 | 0.904738 | 8.961925e-80 | 1.405079e-75 |
| MsG0180001371.01 | MsG0880042890.01 | 0.852164 | 5.524442e-61 | 1.144340e-57 |
| MsG0180001609.01 | MsG0880042890.01 | 0.817024 | 4.086779e-52 | 2.942743e-49 |
| MsG0180001610.01 | MsG0880042890.01 | 0.842820 | 2.047078e-58 | 3.140970e-55 |
| MsG0180001772.01 | MsG0880042890.01 | 0.800130 | 1.665377e-48 | 7.693981e-46 |
| MsG0180001929.01 | MsG0880042890.01 | 0.835718 | 1.425837e-56 | 1.758311e-53 |
| MsG0180002399.01 | MsG0880042890.01 | 0.847019 | 1.506971e-59 | 2.642531e-56 |
| MsG0180002671.01 | MsG0880042890.01 | 0.807482 | 4.948059e-50 | 2.759123e-47 |
| MsG0180002700.01 | MsG0880042890.01 | 0.846494 | 2.097303e-59 | 3.616616e-56 |
| MsG0180002929.01 | MsG0880042890.01 | 0.809589 | 1.755720e-50 | 1.035050e-47 |
| MsG0180003353.01 | MsG0880042890.01 | 0.880494 | 5.243045e-70 | 2.961298e-66 |
| MsG0180003526.01 | MsG0880042890.01 | 0.830420 | 2.966975e-55 | 3.124211e-52 |
| MsG0180003531.01 | MsG0880042890.01 | 0.872975 | 2.103883e-67 | 8.975980e-64 |
| MsG0180003633.01 | MsG0880042890.01 | 0.810808 | 9.588905e-51 | 5.837402e-48 |
| MsG0180003821.01 | MsG0880042890.01 | 0.834159 | 3.521403e-56 | 4.143684e-53 |
| MsG0180003906.01 | MsG0880042890.01 | 0.868826 | 4.890404e-66 | 1.794314e-62 |
| MsG0180003933.01 | MsG0880042890.01 | 0.803228 | 3.853093e-49 | 1.925806e-46 |
| MsG0180003942.01 | MsG0880042890.01 | -0.801159 | 1.027033e-48 | 4.870464e-46 |
| MsG0180004051.01 | MsG0880042890.01 | 0.815991 | 6.960579e-52 | 4.872261e-49 |
| MsG0180004103.01 | MsG0880042890.01 | 0.876115 | 1.804726e-68 | 8.644966e-65 |
| MsG0180004115.01 | MsG0880042890.01 | 0.833362 | 5.572323e-56 | 6.402836e-53 |
| MsG0180004163.01 | MsG0880042890.01 | 0.823814 | 1.130962e-53 | 9.842909e-51 |
| MsG0180004192.01 | MsG0880042890.01 | 0.885024 | 1.161376e-71 | 7.844441e-68 |
| MsG0180004246.01 | MsG0880042890.01 | 0.833003 | 6.842315e-56 | 7.778351e-53 |
| MsG0180004276.01 | MsG0880042890.01 | 0.869300 | 3.432791e-66 | 1.281777e-62 |
| MsG0180004428.01 | MsG0880042890.01 | 0.836727 | 7.896356e-57 | 1.003805e-53 |
| MsG0180004448.01 | MsG0880042890.01 | 0.870959 | 9.832936e-67 | 3.898012e-63 |
| MsG0180004466.01 | MsG0880042890.01 | 0.832272 | 1.039278e-55 | 1.155752e-52 |
| MsG0180004493.01 | MsG0880042890.01 | 0.834001 | 3.857393e-56 | 4.518197e-53 |
| MsG0180004542.01 | MsG0880042890.01 | 0.850388 | 1.753932e-60 | 3.430077e-57 |
| MsG0180004554.01 | MsG0880042890.01 | 0.811513 | 6.742513e-51 | 4.182116e-48 |
| MsG0180004564.01 | MsG0880042890.01 | 0.804982 | 1.663173e-49 | 8.696652e-47 |
| MsG0180004672.01 | MsG0880042890.01 | 0.837037 | 6.584370e-57 | 8.448852e-54 |
| MsG0180004733.01 | MsG0880042890.01 | 0.877649 | 5.303228e-69 | 2.687419e-65 |
| MsG0180004735.01 | MsG0880042890.01 | 0.902283 | 1.135222e-78 | 1.595293e-74 |
| MsG0180004739.01 | MsG0880042890.01 | 0.851833 | 6.860762e-61 | 1.406262e-57 |
| MsG0180004759.01 | MsG0880042890.01 | -0.859743 | 3.348533e-63 | 8.936828e-60 |
| MsG0180004814.01 | MsG0880042890.01 | 0.815415 | 9.352836e-52 | 6.444210e-49 |
| MsG0180004934.01 | MsG0880042890.01 | 0.836319 | 1.003198e-56 | 1.259930e-53 |
| MsG0180004987.01 | MsG0880042890.01 | 0.825848 | 3.747588e-54 | 3.456326e-51 |
| MsG0180005039.01 | MsG0880042890.01 | 0.868965 | 4.410601e-66 | 1.626489e-62 |
| MsG0180005135.01 | MsG0880042890.01 | 0.846584 | 1.981040e-59 | 3.426030e-56 |
| MsG0180005137.01 | MsG0880042890.01 | 0.813000 | 3.193865e-51 | 2.061090e-48 |
| MsG0180005269.01 | MsG0880042890.01 | 0.843501 | 1.347573e-58 | 2.112626e-55 |
| MsG0180005276.01 | MsG0880042890.01 | 0.829424 | 5.188358e-55 | 5.307986e-52 |
| MsG0180005349.01 | MsG0880042890.01 | 0.893854 | 4.263363e-75 | 4.135835e-71 |
| MsG0180005391.01 | MsG0880042890.01 | 0.810749 | 9.873712e-51 | 6.001512e-48 |
| MsG0180005395.01 | MsG0880042890.01 | -0.857039 | 2.140698e-62 | 5.212765e-59 |
| MsG0180005485.01 | MsG0880042890.01 | 0.825466 | 4.616188e-54 | 4.210686e-51 |
| MsG0180005492.01 | MsG0880042890.01 | 0.862907 | 3.633011e-64 | 1.081636e-60 |
| MsG0180005612.01 | MsG0880042890.01 | 0.826641 | 2.427246e-54 | 2.289471e-51 |
| MsG0180005750.01 | MsG0880042890.01 | 0.883882 | 3.079021e-71 | 1.987602e-67 |
| MsG0180005755.01 | MsG0880042890.01 | 0.894359 | 2.656941e-75 | 2.633226e-71 |
| MsG0180005803.01 | MsG0880042890.01 | 0.841913 | 3.560563e-58 | 5.309861e-55 |
| MsG0180005807.01 | MsG0880042890.01 | 0.888078 | 8.116351e-73 | 6.194951e-69 |
| MsG0180005871.01 | MsG0880042890.01 | -0.826503 | 2.618128e-54 | 2.459794e-51 |
| MsG0180005912.01 | MsG0880042890.01 | 0.822166 | 2.740045e-53 | 2.275572e-50 |
| MsG0180005961.01 | MsG0880042890.01 | 0.896707 | 2.848149e-76 | 3.116901e-72 |
| MsG0180005964.01 | MsG0880042890.01 | 0.829871 | 4.039449e-55 | 4.187352e-52 |
| MsG0180006030.01 | MsG0880042890.01 | 0.844311 | 8.180473e-59 | 1.315334e-55 |
| MsG0180006031.01 | MsG0880042890.01 | 0.857091 | 2.066655e-62 | 5.041459e-59 |
| MsG0180006042.01 | MsG0880042890.01 | 0.821958 | 3.061879e-53 | 2.527769e-50 |
| MsG0180006136.01 | MsG0880042890.01 | 0.860231 | 2.385960e-63 | 6.475577e-60 |
| MsG0280006328.01 | MsG0880042890.01 | 0.803248 | 3.816128e-49 | 1.908346e-46 |
| MsG0780040277.01 | MsG0880042890.01 | 0.808773 | 2.626144e-50 | 1.514703e-47 |
| MsG0780040278.01 | MsG0880042890.01 | 0.807375 | 5.211478e-50 | 2.897986e-47 |
| MsG0780040284.01 | MsG0880042890.01 | 0.914297 | 2.260192e-84 | 5.576876e-80 |
| MsG0780040331.01 | MsG0880042890.01 | 0.862591 | 4.547499e-64 | 1.338822e-60 |
| MsG0780040343.01 | MsG0880042890.01 | 0.830629 | 2.637680e-55 | 2.794484e-52 |
| MsG0780040388.01 | MsG0880042890.01 | 0.869087 | 4.027520e-66 | 1.492027e-62 |
| MsG0780040443.01 | MsG0880042890.01 | 0.827668 | 1.377604e-54 | 1.338809e-51 |
| MsG0780040567.01 | MsG0880042890.01 | 0.834408 | 3.050449e-56 | 3.616901e-53 |
| MsG0780040825.01 | MsG0880042890.01 | -0.862659 | 4.332634e-64 | 1.278587e-60 |
| MsG0780040884.01 | MsG0880042890.01 | 0.812468 | 4.175713e-51 | 2.657308e-48 |
| MsG0780040972.01 | MsG0880042890.01 | 0.814779 | 1.294957e-51 | 8.769101e-49 |
| MsG0780041091.01 | MsG0880042890.01 | 0.804694 | 1.909934e-49 | 9.913151e-47 |
| MsG0780041138.01 | MsG0880042890.01 | 0.884069 | 2.625699e-71 | 1.707649e-67 |
| MsG0780041159.01 | MsG0880042890.01 | 0.819921 | 9.009774e-53 | 7.027750e-50 |
| MsG0780041174.01 | MsG0880042890.01 | 0.868450 | 6.472913e-66 | 2.342167e-62 |
| MsG0780041175.01 | MsG0880042890.01 | 0.813277 | 2.777234e-51 | 1.805673e-48 |
| MsG0780041302.01 | MsG0880042890.01 | 0.814900 | 1.217122e-51 | 8.268930e-49 |
| MsG0780041349.01 | MsG0880042890.01 | 0.822198 | 2.692760e-53 | 2.238380e-50 |
| MsG0780041480.01 | MsG0880042890.01 | 0.852681 | 3.935859e-61 | 8.288998e-58 |
| MsG0880041931.01 | MsG0880042890.01 | 0.827487 | 1.522345e-54 | 1.471813e-51 |
| MsG0880041946.01 | MsG0880042890.01 | 0.814354 | 1.608060e-51 | 1.076539e-48 |
| MsG0880041947.01 | MsG0880042890.01 | 0.876344 | 1.505119e-68 | 7.270968e-65 |
| MsG0880041954.01 | MsG0880042890.01 | 0.813936 | 1.988882e-51 | 1.316427e-48 |
| MsG0880042044.01 | MsG0880042890.01 | 0.823274 | 1.512571e-53 | 1.296367e-50 |
| MsG0880042290.01 | MsG0880042890.01 | 0.865693 | 4.907936e-65 | 1.611455e-61 |
| MsG0880042475.01 | MsG0880042890.01 | 0.879716 | 9.926089e-70 | 5.438844e-66 |
| MsG0880042555.01 | MsG0880042890.01 | 0.859708 | 3.431780e-63 | 9.147120e-60 |
| MsG0880042689.01 | MsG0880042890.01 | 0.804891 | 1.737900e-49 | 9.066973e-47 |
| MsG0880042890.01 | MsG0880042894.01 | 0.853457 | 2.359801e-61 | 5.102211e-58 |
| MsG0880042890.01 | MsG0880043024.01 | 0.823411 | 1.405464e-53 | 1.209101e-50 |
| MsG0880042890.01 | MsG0880043032.01 | 0.811009 | 8.671903e-51 | 5.308233e-48 |
| MsG0880042890.01 | MsG0880043075.01 | 0.807926 | 3.980428e-50 | 2.245330e-47 |
| MsG0880042890.01 | MsG0880043174.01 | 0.833294 | 5.791335e-56 | 6.640751e-53 |
| MsG0880042890.01 | MsG0880043249.01 | 0.843663 | 1.219892e-58 | 1.922308e-55 |
| MsG0880042890.01 | MsG0880043277.01 | 0.873271 | 1.673672e-67 | 7.219228e-64 |
| MsG0880042890.01 | MsG0880043278.01 | 0.824800 | 6.632520e-54 | 5.937027e-51 |
| MsG0880042890.01 | MsG0880043290.01 | 0.826293 | 2.937498e-54 | 2.743434e-51 |
| MsG0880042890.01 | MsG0880043417.01 | 0.814769 | 1.301656e-51 | 8.811637e-49 |
| MsG0880042890.01 | MsG0880043814.01 | 0.874787 | 5.139877e-68 | 2.344019e-64 |
| MsG0880042890.01 | MsG0880043965.01 | 0.847845 | 8.938122e-60 | 1.609433e-56 |
| MsG0880042890.01 | MsG0880044005.01 | 0.834894 | 2.301958e-56 | 2.769192e-53 |
| MsG0880042890.01 | MsG0880044228.01 | 0.864866 | 8.931369e-65 | 2.846290e-61 |
| MsG0880042890.01 | MsG0880044314.01 | 0.828955 | 6.740848e-55 | 6.801300e-52 |
| MsG0880042890.01 | MsG0880044392.01 | 0.922183 | 1.369342e-88 | 5.102588e-84 |
| MsG0880042890.01 | MsG0880044414.01 | 0.885199 | 9.985253e-72 | 6.790966e-68 |
| MsG0880042890.01 | MsG0880044487.01 | 0.877520 | 5.886030e-69 | 2.968262e-65 |
| MsG0880042890.01 | MsG0880044691.01 | 0.832593 | 8.653338e-56 | 9.716597e-53 |
| MsG0880042890.01 | MsG0880044704.01 | 0.809359 | 1.967850e-50 | 1.153000e-47 |
| MsG0880042890.01 | MsG0880044884.01 | 0.840432 | 8.729218e-58 | 1.243150e-54 |
| MsG0880042890.01 | MsG0880044985.01 | 0.832312 | 1.015440e-55 | 1.130606e-52 |
| MsG0880042890.01 | MsG0880045044.01 | 0.813539 | 2.432258e-51 | 1.592773e-48 |
| MsG0880042890.01 | MsG0880045101.01 | 0.915936 | 3.250291e-85 | 8.718926e-81 |
| MsG0880042890.01 | MsG0880045158.01 | 0.863114 | 3.135202e-64 | 9.398729e-61 |
| MsG0880042890.01 | MsG0880045361.01 | 0.852515 | 4.388076e-61 | 9.191772e-58 |
| MsG0880042890.01 | MsG0880045444.01 | 0.800749 | 1.245259e-48 | 5.844149e-46 |
| MsG0880042890.01 | MsG0880045558.01 | 0.857812 | 1.264461e-62 | 3.159887e-59 |
| MsG0880042890.01 | MsG0880045668.01 | 0.831110 | 2.010383e-55 | 2.160374e-52 |
| MsG0880042890.01 | MsG0880045722.01 | 0.809987 | 1.441677e-50 | 8.588645e-48 |
| MsG0880042890.01 | MsG0880046054.01 | 0.895887 | 6.252003e-76 | 6.604126e-72 |
| MsG0880042890.01 | MsG0880046255.01 | 0.851406 | 9.062511e-61 | 1.832562e-57 |
| MsG0880042890.01 | MsG0880046267.01 | 0.873925 | 1.007091e-67 | 4.447386e-64 |
| MsG0880042890.01 | MsG0880046382.01 | 0.886790 | 2.517575e-72 | 1.823770e-68 |
| MsG0880042890.01 | MsG0880046675.01 | 0.806861 | 6.696048e-50 | 3.674236e-47 |
| MsG0880042890.01 | MsG0880046764.01 | 0.852041 | 5.987905e-61 | 1.235471e-57 |
| MsG0880042890.01 | MsG0880046765.01 | 0.890754 | 7.403772e-74 | 6.310304e-70 |
| MsG0880042890.01 | MsG0880046791.01 | 0.868387 | 6.781749e-66 | 2.448642e-62 |
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| MsG0780037399.01 | MsG0880042890.01 | 0.800506 | 1.395781e-48 | 6.510290e-46 |
| MsG0780037436.01 | MsG0880042890.01 | 0.815704 | 8.064980e-52 | 5.601256e-49 |
| MsG0780037638.01 | MsG0880042890.01 | 0.836558 | 8.721484e-57 | 1.102995e-53 |
| MsG0780037662.01 | MsG0880042890.01 | 0.850529 | 1.600961e-60 | 3.145208e-57 |
| MsG0780037705.01 | MsG0880042890.01 | 0.806800 | 6.898163e-50 | 3.779048e-47 |
| MsG0780038056.01 | MsG0880042890.01 | 0.819457 | 1.149588e-52 | 8.851655e-50 |
| MsG0780038334.01 | MsG0880042890.01 | 0.801284 | 9.681611e-49 | 4.605719e-46 |
| MsG0780038351.01 | MsG0880042890.01 | 0.878608 | 2.446298e-69 | 1.285666e-65 |
| MsG0780038571.01 | MsG0880042890.01 | 0.855361 | 6.642638e-62 | 1.529873e-58 |
| MsG0780038584.01 | MsG0880042890.01 | -0.802093 | 6.606923e-49 | 3.208098e-46 |
| MsG0780038616.01 | MsG0880042890.01 | 0.905500 | 4.021152e-80 | 6.523386e-76 |
| MsG0780038784.01 | MsG0880042890.01 | 0.929369 | 7.672488e-93 | 4.266292e-88 |
| MsG0780038807.01 | MsG0880042890.01 | 0.862824 | 3.855193e-64 | 1.144528e-60 |
| MsG0780038846.01 | MsG0880042890.01 | 0.819748 | 9.866050e-53 | 7.658427e-50 |
| MsG0780039186.01 | MsG0880042890.01 | 0.860667 | 1.760070e-63 | 4.849411e-60 |
| MsG0780039675.01 | MsG0880042890.01 | 0.922671 | 7.257080e-89 | 2.780882e-84 |
| MsG0780039707.01 | MsG0880042890.01 | 0.818989 | 1.469430e-52 | 1.116936e-49 |
| MsG0780039746.01 | MsG0880042890.01 | 0.902881 | 6.158982e-79 | 8.903303e-75 |
| MsG0780039853.01 | MsG0880042890.01 | 0.865968 | 4.016438e-65 | 1.331509e-61 |
| MsG0780039954.01 | MsG0880042890.01 | 0.810066 | 1.386358e-50 | 8.275790e-48 |
| MsG0780039975.01 | MsG0880042890.01 | 0.871357 | 7.271373e-67 | 2.924533e-63 |
| MsG0780039988.01 | MsG0880042890.01 | 0.828930 | 6.837540e-55 | 6.893763e-52 |
| MsG0780040061.01 | MsG0880042890.01 | 0.861709 | 8.479836e-64 | 2.420660e-60 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042890.01.T01 | MTR_8g024210 | 90.050 | 402 | 3 | 1 | 1 | 402 | 1 | 365 | 0.0 | 723 |
| MsG0880042890.01.T01 | MTR_3g099620 | 50.233 | 215 | 89 | 4 | 142 | 338 | 75 | 289 | 3.85e-63 | 206 |
| MsG0880042890.01.T01 | MTR_7g113830 | 44.048 | 252 | 94 | 3 | 157 | 398 | 92 | 306 | 1.76e-60 | 199 |
| MsG0880042890.01.T01 | MTR_0194s0050 | 56.410 | 195 | 67 | 4 | 162 | 338 | 165 | 359 | 6.51e-59 | 197 |
| MsG0880042890.01.T01 | MTR_5g064950 | 44.690 | 226 | 100 | 5 | 157 | 362 | 76 | 296 | 2.23e-56 | 187 |
| MsG0880042890.01.T01 | MTR_1g082480 | 43.933 | 239 | 83 | 4 | 174 | 398 | 129 | 330 | 3.29e-55 | 186 |
| MsG0880042890.01.T01 | MTR_5g064950 | 47.739 | 199 | 82 | 4 | 157 | 338 | 76 | 269 | 7.95e-54 | 181 |
| MsG0880042890.01.T01 | MTR_8g066770 | 43.333 | 240 | 84 | 4 | 171 | 398 | 104 | 303 | 1.05e-53 | 181 |
| MsG0880042890.01.T01 | MTR_1g082480 | 46.602 | 206 | 89 | 4 | 174 | 365 | 129 | 327 | 1.54e-53 | 181 |
| MsG0880042890.01.T01 | MTR_3g090850 | 38.819 | 237 | 88 | 6 | 158 | 338 | 74 | 309 | 1.38e-37 | 139 |
| MsG0880042890.01.T01 | MTR_2g022280 | 43.931 | 173 | 75 | 2 | 181 | 338 | 1 | 166 | 1.46e-37 | 135 |
| MsG0880042890.01.T01 | MTR_1g028470 | 33.617 | 235 | 114 | 3 | 134 | 338 | 51 | 273 | 1.58e-31 | 121 |
| MsG0880042890.01.T01 | MTR_1g072320 | 30.986 | 142 | 91 | 3 | 183 | 319 | 471 | 610 | 8.76e-13 | 70.5 |
| MsG0880042890.01.T01 | MTR_8g027495 | 27.160 | 162 | 95 | 5 | 181 | 337 | 457 | 600 | 3.43e-12 | 68.6 |
| MsG0880042890.01.T01 | MTR_5g014520 | 29.530 | 149 | 100 | 2 | 183 | 331 | 158 | 301 | 3.79e-12 | 67.4 |
| MsG0880042890.01.T01 | MTR_3g498695 | 28.947 | 190 | 105 | 6 | 157 | 334 | 284 | 455 | 5.82e-12 | 67.4 |
| MsG0880042890.01.T01 | MTR_3g498695 | 28.947 | 190 | 105 | 6 | 157 | 334 | 284 | 455 | 6.18e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880042890.01.T01 | AT3G61950 | 39.480 | 423 | 158 | 11 | 1 | 395 | 1 | 353 | 1.21e-74 | 236 |
| MsG0880042890.01.T01 | AT3G61950 | 43.169 | 366 | 147 | 10 | 1 | 338 | 1 | 333 | 1.05e-73 | 234 |
| MsG0880042890.01.T01 | AT2G46810 | 41.530 | 366 | 152 | 10 | 51 | 395 | 1 | 325 | 5.84e-73 | 231 |
| MsG0880042890.01.T01 | AT2G46810 | 39.713 | 418 | 147 | 13 | 14 | 395 | 21 | 369 | 1.79e-72 | 231 |
| MsG0880042890.01.T01 | AT2G46810 | 39.583 | 432 | 149 | 15 | 1 | 395 | 1 | 357 | 3.20e-72 | 230 |
| MsG0880042890.01.T01 | AT2G46810 | 39.071 | 366 | 133 | 9 | 51 | 395 | 1 | 297 | 4.22e-65 | 210 |
| MsG0880042890.01.T01 | AT4G01460 | 38.667 | 375 | 127 | 9 | 40 | 400 | 20 | 305 | 1.63e-61 | 201 |
| MsG0880042890.01.T01 | AT4G01460 | 38.667 | 375 | 127 | 9 | 40 | 400 | 20 | 305 | 1.63e-61 | 201 |
| MsG0880042890.01.T01 | AT3G61950 | 38.482 | 369 | 136 | 8 | 51 | 395 | 1 | 302 | 2.99e-61 | 200 |
| MsG0880042890.01.T01 | AT3G61950 | 42.628 | 312 | 125 | 7 | 51 | 338 | 1 | 282 | 2.68e-60 | 197 |
| MsG0880042890.01.T01 | AT3G24140 | 44.788 | 259 | 85 | 4 | 161 | 399 | 177 | 397 | 8.48e-56 | 189 |
| MsG0880042890.01.T01 | AT3G24140 | 44.788 | 259 | 85 | 4 | 161 | 399 | 177 | 397 | 1.02e-55 | 189 |
| MsG0880042890.01.T01 | AT1G22490 | 52.514 | 179 | 68 | 3 | 171 | 338 | 105 | 277 | 4.62e-53 | 179 |
| MsG0880042890.01.T01 | AT1G22490 | 49.744 | 195 | 79 | 4 | 171 | 354 | 105 | 291 | 1.37e-52 | 178 |
| MsG0880042890.01.T01 | AT1G72210 | 43.038 | 237 | 88 | 4 | 171 | 398 | 115 | 313 | 2.37e-51 | 175 |
| MsG0880042890.01.T01 | AT1G72210 | 50.847 | 177 | 77 | 3 | 171 | 338 | 115 | 290 | 5.17e-51 | 174 |
| MsG0880042890.01.T01 | AT5G46690 | 39.768 | 259 | 88 | 5 | 171 | 398 | 78 | 299 | 4.16e-40 | 145 |
| MsG0880042890.01.T01 | AT5G46690 | 45.411 | 207 | 81 | 6 | 171 | 346 | 78 | 283 | 2.46e-38 | 140 |
| MsG0880042890.01.T01 | AT3G06120 | 42.775 | 173 | 84 | 2 | 181 | 338 | 1 | 173 | 4.69e-37 | 134 |
| MsG0880042890.01.T01 | AT3G61950 | 39.662 | 237 | 90 | 7 | 1 | 212 | 1 | 209 | 6.09e-37 | 134 |
| MsG0880042890.01.T01 | AT3G61950 | 39.662 | 237 | 90 | 7 | 1 | 212 | 1 | 209 | 6.09e-37 | 134 |
| MsG0880042890.01.T01 | AT5G65320 | 41.808 | 177 | 94 | 3 | 175 | 342 | 96 | 272 | 3.23e-32 | 123 |
| MsG0880042890.01.T01 | AT5G65320 | 40.884 | 181 | 82 | 4 | 175 | 338 | 96 | 268 | 1.28e-30 | 119 |
| MsG0880042890.01.T01 | AT5G53210 | 63.889 | 72 | 25 | 1 | 172 | 243 | 94 | 164 | 3.46e-24 | 102 |
| MsG0880042890.01.T01 | AT5G53210 | 63.889 | 72 | 25 | 1 | 172 | 243 | 94 | 164 | 3.97e-24 | 102 |
| MsG0880042890.01.T01 | AT5G57150 | 29.231 | 195 | 121 | 7 | 183 | 366 | 56 | 244 | 1.02e-13 | 71.2 |
| MsG0880042890.01.T01 | AT1G12860 | 31.325 | 166 | 97 | 5 | 183 | 339 | 268 | 425 | 2.64e-12 | 68.6 |
| MsG0880042890.01.T01 | AT2G16910 | 29.213 | 178 | 97 | 6 | 183 | 337 | 315 | 486 | 3.57e-11 | 65.5 |
Find 69 sgRNAs with CRISPR-Local
Find 137 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGGTGGAAACTTCTTAAA+TGG | 0.167879 | 8:+15475953 | None:intergenic |
| TCTTATTCCGCTTCTTCTTA+TGG | 0.206056 | 8:-15475710 | MsG0880042890.01.T01:five_prime_UTR |
| ACTTGTTGTGAATCCATTCT+AGG | 0.226170 | 8:+15474896 | None:intergenic |
| TAAATAACGAGCTGTATATA+TGG | 0.242538 | 8:-15472865 | MsG0880042890.01.T01:intron |
| ACATCTTCCTTATTCTTAAC+TGG | 0.278715 | 8:+15474653 | None:intergenic |
| AACAAGACCAGTTAAGAATA+AGG | 0.304290 | 8:-15474660 | MsG0880042890.01.T01:CDS |
| TTGTTGCTTTGGAAAATCTT+AGG | 0.306717 | 8:-15473843 | MsG0880042890.01.T01:CDS |
| CTTTGAAGCATTTGAAGAAA+TGG | 0.310096 | 8:+15475019 | None:intergenic |
| GATAAAGGTTATTGTTGCTT+TGG | 0.325174 | 8:-15473854 | MsG0880042890.01.T01:CDS |
| TGTTGTTCCTTGTTGAGATT+TGG | 0.330133 | 8:+15474706 | None:intergenic |
| GGTGACCAAGCATCAATAAT+TGG | 0.351169 | 8:-15474129 | MsG0880042890.01.T01:CDS |
| ACTCAAAAGATGTGATGTTT+AGG | 0.363568 | 8:+15473806 | None:intergenic |
| TAAATGTGGTCAACTCACTA+TGG | 0.365350 | 8:-15473693 | MsG0880042890.01.T01:CDS |
| ATGACCACCTTAGTGTTCTT+AGG | 0.380570 | 8:-15474574 | MsG0880042890.01.T01:CDS |
| CACTAAGGTGGTCATTCATT+TGG | 0.381725 | 8:+15474582 | None:intergenic |
| TTTGTTCATCAAGTAATGTT+TGG | 0.386937 | 8:+15475098 | None:intergenic |
| CTCCTCCAATTATTGATGCT+TGG | 0.405749 | 8:+15474124 | None:intergenic |
| AAGGTGGAAACTTCTTAAAT+GGG | 0.406058 | 8:+15475954 | None:intergenic |
| AAAGGCTGGTCAATTGATAA+AGG | 0.417902 | 8:-15473869 | MsG0880042890.01.T01:CDS |
| CATAGCTTACATTCCTAGAA+TGG | 0.419943 | 8:-15474909 | MsG0880042890.01.T01:CDS |
| AATACATACACAAGAATTGA+TGG | 0.427991 | 8:+15475547 | None:intergenic |
| TCATCATCACCGCCTAGTTA+TGG | 0.434743 | 8:-15474009 | MsG0880042890.01.T01:CDS |
| TTGATCATGGAGAGGCTTCA+AGG | 0.435947 | 8:-15475572 | MsG0880042890.01.T01:exon |
| GAGACTTAAGAGTTGTTTGT+TGG | 0.450047 | 8:-15475834 | MsG0880042890.01.T01:five_prime_UTR |
| ATATTCAGCTACATCAATAA+TGG | 0.454301 | 8:-15472776 | MsG0880042890.01.T01:CDS |
| AAATAACGAGCTGTATATAT+GGG | 0.465157 | 8:-15472864 | MsG0880042890.01.T01:intron |
| CATATACACCACTTTGATCA+TGG | 0.467083 | 8:-15475585 | MsG0880042890.01.T01:exon |
| GAATAATACCTTGAGATTGA+AGG | 0.480462 | 8:+15473768 | None:intergenic |
| ATATTGCTGTTGAACGCAAT+AGG | 0.480469 | 8:-15474610 | MsG0880042890.01.T01:CDS |
| TGCCATCTTCATATGTTCAA+AGG | 0.494987 | 8:-15474544 | MsG0880042890.01.T01:CDS |
| ACAAAGTTTGAGATTTGAAG+AGG | 0.495050 | 8:-15475080 | MsG0880042890.01.T01:CDS |
| GATAATTTCATTCCATAACT+AGG | 0.502981 | 8:+15473997 | None:intergenic |
| GCCATCTTCATATGTTCAAA+GGG | 0.503887 | 8:-15474543 | MsG0880042890.01.T01:intron |
| TTGTGAAGAAAATGAGGTAA+AGG | 0.510975 | 8:-15473971 | MsG0880042890.01.T01:CDS |
| TAAAAGAAGTAGAGGGATTG+TGG | 0.511254 | 8:+15475921 | None:intergenic |
| TTATTGCTTTCTGATTTCAC+TGG | 0.515406 | 8:+15474812 | None:intergenic |
| ATGGATTCACAACAAGTTCA+AGG | 0.515635 | 8:-15474890 | MsG0880042890.01.T01:CDS |
| AATGCTTTAGCTTTCAATGA+GGG | 0.528738 | 8:+15475627 | None:intergenic |
| ACCCTTTGAACATATGAAGA+TGG | 0.543479 | 8:+15474542 | None:intergenic |
| GATTTATACCAACAAAAGAA+TGG | 0.544282 | 8:+15475673 | None:intergenic |
| ATCACCTTGTGAAGAAAATG+AGG | 0.546176 | 8:-15473977 | MsG0880042890.01.T01:CDS |
| TGTTGATCTAAAAGAAGTAG+AGG | 0.546787 | 8:+15475913 | None:intergenic |
| ATCATTACCATACGGAATGT+TGG | 0.549626 | 8:-15475653 | MsG0880042890.01.T01:five_prime_UTR |
| TTTGGGGTATTACTCATATG+GGG | 0.549873 | 8:-15475733 | MsG0880042890.01.T01:five_prime_UTR |
| ATTGAAGAAGACTGTAAGCT+AGG | 0.552236 | 8:-15472833 | MsG0880042890.01.T01:CDS |
| TGTGATGTTTAGGTGAAGAA+TGG | 0.555251 | 8:+15473816 | None:intergenic |
| GTTGATCTAAAAGAAGTAGA+GGG | 0.563857 | 8:+15475914 | None:intergenic |
| TGTAAAACCATAAGAAGAAG+CGG | 0.577295 | 8:+15475703 | None:intergenic |
| TGGTATAAATCATTACCATA+CGG | 0.581644 | 8:-15475661 | MsG0880042890.01.T01:five_prime_UTR |
| ATGTAAGCTATGTCTTCCCA+TGG | 0.586787 | 8:+15474920 | None:intergenic |
| ACAAGTTCAAGGCGCAACAT+TGG | 0.592711 | 8:-15474879 | MsG0880042890.01.T01:CDS |
| AAGCCTCTCCATGATCAAAG+TGG | 0.604207 | 8:+15475577 | None:intergenic |
| TAATGCTTTAGCTTTCAATG+AGG | 0.607199 | 8:+15475626 | None:intergenic |
| TTGTGGTAAGAAATGAAAGG+TGG | 0.615297 | 8:+15475938 | None:intergenic |
| AGGTGGAAACTTCTTAAATG+GGG | 0.615676 | 8:+15475955 | None:intergenic |
| ACTCTACTCCTTCAATCTCA+AGG | 0.617899 | 8:-15473776 | MsG0880042890.01.T01:CDS |
| ATACATACACAAGAATTGAT+GGG | 0.621363 | 8:+15475548 | None:intergenic |
| AGGGTGACCAACATTCCGTA+TGG | 0.622271 | 8:+15475646 | None:intergenic |
| TGAGAGACCTAAGAACACTA+AGG | 0.629812 | 8:+15474567 | None:intergenic |
| ACTCTTAAGTCTCACAACAA+AGG | 0.637326 | 8:+15475844 | None:intergenic |
| GACCAAGCATCAATAATTGG+AGG | 0.640978 | 8:-15474126 | MsG0880042890.01.T01:CDS |
| AATCTCAACAAGGAACAACA+AGG | 0.648093 | 8:-15474703 | MsG0880042890.01.T01:CDS |
| ACACCACTTTGATCATGGAG+AGG | 0.659194 | 8:-15475580 | MsG0880042890.01.T01:exon |
| ATCTCAACAAGGAACAACAA+GGG | 0.668773 | 8:-15474702 | MsG0880042890.01.T01:CDS |
| AGGCGGTGATGATGATGATG+AGG | 0.686258 | 8:+15474017 | None:intergenic |
| TCATGTTCCAAATCTCAACA+AGG | 0.700363 | 8:-15474713 | MsG0880042890.01.T01:CDS |
| GAGACCTAAGAACACTAAGG+TGG | 0.704555 | 8:+15474570 | None:intergenic |
| GGATTGTGGTAAGAAATGAA+AGG | 0.708938 | 8:+15475935 | None:intergenic |
| AATTTCATTCCATAACTAGG+CGG | 0.718157 | 8:+15474000 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATAATTCAAAAGAAGTA+AGG | + | Chr8:15473463-15473482 | None:intergenic | 15.0% |
| !! | TTTATAATGATAAACAATGT+TGG | + | Chr8:15475122-15475141 | None:intergenic | 15.0% |
| !!! | AACAAAAGAGTATATTTTTT+TGG | - | Chr8:15472975-15472994 | MsG0880042890.01.T01:intron | 15.0% |
| !!! | ACAAAAGAGTATATTTTTTT+GGG | - | Chr8:15472976-15472995 | MsG0880042890.01.T01:intron | 15.0% |
| !!! | ATAAAAAAGAATGAAGATTT+TGG | - | Chr8:15474684-15474703 | MsG0880042890.01.T01:CDS | 15.0% |
| !!! | ATTTTTTTCATTTATGTGTA+TGG | + | Chr8:15475452-15475471 | None:intergenic | 15.0% |
| !!! | TTAATTTTTTTTCAGTTCTT+TGG | - | Chr8:15473587-15473606 | MsG0880042890.01.T01:intron | 15.0% |
| !!! | TTATGTTTTAAAAATCACTT+AGG | - | Chr8:15474533-15474552 | MsG0880042890.01.T01:intron | 15.0% |
| !! | AATATATGCTTTAATGAATG+AGG | + | Chr8:15473440-15473459 | None:intergenic | 20.0% |
| !! | TATACAAAACCAAAAAAGAT+TGG | + | Chr8:15474304-15474323 | None:intergenic | 20.0% |
| !! | TGTTTAATGTTTATGTGATA+GGG | - | Chr8:15474576-15474595 | MsG0880042890.01.T01:CDS | 20.0% |
| !! | TTGTTTAATGTTTATGTGAT+AGG | - | Chr8:15474575-15474594 | MsG0880042890.01.T01:CDS | 20.0% |
| !!! | AAAACTTTCAAACACTTTTA+AGG | - | Chr8:15473765-15473784 | MsG0880042890.01.T01:CDS | 20.0% |
| !!! | AGAAGAGAAATGTAATTTTT+AGG | + | Chr8:15473333-15473352 | None:intergenic | 20.0% |
| !!! | ATTTATTACCATTCTTTTGT+TGG | - | Chr8:15473045-15473064 | MsG0880042890.01.T01:intron | 20.0% |
| !!! | CAAAAGAGTATATTTTTTTG+GGG | - | Chr8:15472977-15472996 | MsG0880042890.01.T01:intron | 20.0% |
| !!! | GTTAAAAATCCAATCTTTTT+TGG | - | Chr8:15474292-15474311 | MsG0880042890.01.T01:intron | 20.0% |
| !!! | TTTTTTGGTTTTGTATACAA+GGG | - | Chr8:15474307-15474326 | MsG0880042890.01.T01:intron | 20.0% |
| ! | AAATAACGAGCTGTATATAT+GGG | - | Chr8:15475862-15475881 | MsG0880042890.01.T01:five_prime_UTR | 25.0% |
| ! | AAGATTAGAGAAATAAGAAG+TGG | + | Chr8:15475333-15475352 | None:intergenic | 25.0% |
| ! | AATACATACACAAGAATTGA+TGG | + | Chr8:15473182-15473201 | None:intergenic | 25.0% |
| ! | ACATGAAAATCTCAAAAGAA+AGG | + | Chr8:15474274-15474293 | None:intergenic | 25.0% |
| ! | ATACATACACAAGAATTGAT+GGG | + | Chr8:15473181-15473200 | None:intergenic | 25.0% |
| ! | ATAGAACACACTATTTGAAA+GGG | - | Chr8:15475366-15475385 | MsG0880042890.01.T01:intron | 25.0% |
| ! | ATATTCAGCTACATCAATAA+TGG | - | Chr8:15475950-15475969 | MsG0880042890.01.T01:five_prime_UTR | 25.0% |
| ! | GAAAATTGAGTGCAAAAAAA+AGG | - | Chr8:15474839-15474858 | MsG0880042890.01.T01:CDS | 25.0% |
| ! | GATAATTTCATTCCATAACT+AGG | + | Chr8:15474732-15474751 | None:intergenic | 25.0% |
| ! | GATTTATACCAACAAAAGAA+TGG | + | Chr8:15473056-15473075 | None:intergenic | 25.0% |
| ! | TAAATAACGAGCTGTATATA+TGG | - | Chr8:15475839-15475858 | MsG0880042890.01.T01:five_prime_UTR | 25.0% |
| ! | TCAACATATGAAAAAACCAT+GGG | - | Chr8:15473790-15473809 | MsG0880042890.01.T01:CDS | 25.0% |
| ! | TGGTATAAATCATTACCATA+CGG | - | Chr8:15473065-15473084 | MsG0880042890.01.T01:intron | 25.0% |
| ! | TTAATGAATGAGGATGAATT+TGG | + | Chr8:15473430-15473449 | None:intergenic | 25.0% |
| ! | TTCAACATATGAAAAAACCA+TGG | - | Chr8:15473789-15473808 | MsG0880042890.01.T01:CDS | 25.0% |
| ! | TTTGTTCATCAAGTAATGTT+TGG | + | Chr8:15473631-15473650 | None:intergenic | 25.0% |
| !!! | AAGAAAGGATTTTGAAGAAA+AGG | + | Chr8:15474259-15474278 | None:intergenic | 25.0% |
| !!! | AATTGATTTTGTGAAAGAGT+TGG | - | Chr8:15474626-15474645 | MsG0880042890.01.T01:CDS | 25.0% |
| !!! | AGAAAGGATTTTGAAGAAAA+GGG | + | Chr8:15474258-15474277 | None:intergenic | 25.0% |
| !!! | CTTTTTTGGTTTTGTATACA+AGG | - | Chr8:15474306-15474325 | MsG0880042890.01.T01:intron | 25.0% |
| !!! | GCATTACATTTTTTTTCTCT+TGG | - | Chr8:15473218-15473237 | MsG0880042890.01.T01:intron | 25.0% |
| !!! | TGAAAGTTTTGTTCTTTCAA+TGG | + | Chr8:15473755-15473774 | None:intergenic | 25.0% |
| AAAGGTGGAAACTTCTTAAA+TGG | + | Chr8:15472776-15472795 | None:intergenic | 30.0% | |
| AACAAGACCAGTTAAGAATA+AGG | - | Chr8:15474066-15474085 | MsG0880042890.01.T01:CDS | 30.0% | |
| AAGGTGGAAACTTCTTAAAT+GGG | + | Chr8:15472775-15472794 | None:intergenic | 30.0% | |
| AATCTCTTGAAGCACAAAAA+AGG | - | Chr8:15474661-15474680 | MsG0880042890.01.T01:CDS | 30.0% | |
| AATTTCATTCCATAACTAGG+CGG | + | Chr8:15474729-15474748 | None:intergenic | 30.0% | |
| ACATCTTCCTTATTCTTAAC+TGG | + | Chr8:15474076-15474095 | None:intergenic | 30.0% | |
| ACTCAAAAGATGTGATGTTT+AGG | + | Chr8:15474923-15474942 | None:intergenic | 30.0% | |
| ACTCTAATGTTGAGTTTATG+AGG | - | Chr8:15475597-15475616 | MsG0880042890.01.T01:five_prime_UTR | 30.0% | |
| AGAAAAAATGAAGCAGTGTT+TGG | + | Chr8:15473511-15473530 | None:intergenic | 30.0% | |
| CATAGAACACACTATTTGAA+AGG | - | Chr8:15475365-15475384 | MsG0880042890.01.T01:intron | 30.0% | |
| CCTATTTGTAGAATCAAGAA+AGG | - | Chr8:15473248-15473267 | MsG0880042890.01.T01:intron | 30.0% | |
| CCTTTCTTGATTCTACAAAT+AGG | + | Chr8:15473251-15473270 | None:intergenic | 30.0% | |
| GAATAATACCTTGAGATTGA+AGG | + | Chr8:15474961-15474980 | None:intergenic | 30.0% | |
| GTTGATCTAAAAGAAGTAGA+GGG | + | Chr8:15472815-15472834 | None:intergenic | 30.0% | |
| TAGAACACACTATTTGAAAG+GGG | - | Chr8:15475367-15475386 | MsG0880042890.01.T01:intron | 30.0% | |
| TCTTTCAATGGAAAAAACTG+TGG | + | Chr8:15473743-15473762 | None:intergenic | 30.0% | |
| TGTAAAACCATAAGAAGAAG+CGG | + | Chr8:15473026-15473045 | None:intergenic | 30.0% | |
| TGTTGATCTAAAAGAAGTAG+AGG | + | Chr8:15472816-15472835 | None:intergenic | 30.0% | |
| TTATTGCTTTCTGATTTCAC+TGG | + | Chr8:15473917-15473936 | None:intergenic | 30.0% | |
| TTGTGAAGAAAATGAGGTAA+AGG | - | Chr8:15474755-15474774 | MsG0880042890.01.T01:CDS | 30.0% | |
| ! | AATTTGGAGTTTGGTAAGAA+TGG | + | Chr8:15473414-15473433 | None:intergenic | 30.0% |
| ! | ACAAAGTTTGAGATTTGAAG+AGG | - | Chr8:15473646-15473665 | MsG0880042890.01.T01:intron | 30.0% |
| ! | GATAAAGGTTATTGTTGCTT+TGG | - | Chr8:15474872-15474891 | MsG0880042890.01.T01:CDS | 30.0% |
| ! | TTTACCTCATTTTCTTCACA+AGG | + | Chr8:15474756-15474775 | None:intergenic | 30.0% |
| !! | AATGCTTTAGCTTTCAATGA+GGG | + | Chr8:15473102-15473121 | None:intergenic | 30.0% |
| !! | CTTTGAAGCATTTGAAGAAA+TGG | + | Chr8:15473710-15473729 | None:intergenic | 30.0% |
| !! | TAATGCTTTAGCTTTCAATG+AGG | + | Chr8:15473103-15473122 | None:intergenic | 30.0% |
| !! | TTCAGCTAGTTTCTAGATTT+TGG | - | Chr8:15475667-15475686 | MsG0880042890.01.T01:five_prime_UTR | 30.0% |
| !! | TTGTTGCTTTGGAAAATCTT+AGG | - | Chr8:15474883-15474902 | MsG0880042890.01.T01:CDS | 30.0% |
| !!! | ACTCAATTTTCAAGTTCACA+TGG | + | Chr8:15474830-15474849 | None:intergenic | 30.0% |
| !!! | CTCAATTTTCAAGTTCACAT+GGG | + | Chr8:15474829-15474848 | None:intergenic | 30.0% |
| !!! | CTGTTTTTGTTTCTTCTTGT+TGG | + | Chr8:15473988-15474007 | None:intergenic | 30.0% |
| !!! | TTTTGGGGTATTACTCATAT+GGG | - | Chr8:15472992-15473011 | MsG0880042890.01.T01:intron | 30.0% |
| !!! | TTTTTGGGGTATTACTCATA+TGG | - | Chr8:15472991-15473010 | MsG0880042890.01.T01:intron | 30.0% |
| AATCTCAACAAGGAACAACA+AGG | - | Chr8:15474023-15474042 | MsG0880042890.01.T01:CDS | 35.0% | |
| ACCCTTTGAACATATGAAGA+TGG | + | Chr8:15474187-15474206 | None:intergenic | 35.0% | |
| ACTCTTAAGTCTCACAACAA+AGG | + | Chr8:15472885-15472904 | None:intergenic | 35.0% | |
| AGCTAATGCTATGAGTATGA+GGG | - | Chr8:15475243-15475262 | MsG0880042890.01.T01:intron | 35.0% | |
| AGCTCATAGATTAACTAAGG+TGG | - | Chr8:15475637-15475656 | MsG0880042890.01.T01:five_prime_UTR | 35.0% | |
| AGGTGGAAACTTCTTAAATG+GGG | + | Chr8:15472774-15472793 | None:intergenic | 35.0% | |
| AGTTTGGTAAGAATGGAGAA+AGG | + | Chr8:15473407-15473426 | None:intergenic | 35.0% | |
| ATCACCTTGTGAAGAAAATG+AGG | - | Chr8:15474749-15474768 | MsG0880042890.01.T01:CDS | 35.0% | |
| ATCATTACCATACGGAATGT+TGG | - | Chr8:15473073-15473092 | MsG0880042890.01.T01:intron | 35.0% | |
| ATCTCAACAAGGAACAACAA+GGG | - | Chr8:15474024-15474043 | MsG0880042890.01.T01:CDS | 35.0% | |
| ATGGATTCACAACAAGTTCA+AGG | - | Chr8:15473836-15473855 | MsG0880042890.01.T01:CDS | 35.0% | |
| ATTGAAGAAGACTGTAAGCT+AGG | - | Chr8:15475893-15475912 | MsG0880042890.01.T01:five_prime_UTR | 35.0% | |
| ATTGAGTGCAAAAAAAAGGC+TGG | - | Chr8:15474843-15474862 | MsG0880042890.01.T01:CDS | 35.0% | |
| CATAGCTTACATTCCTAGAA+TGG | - | Chr8:15473817-15473836 | MsG0880042890.01.T01:CDS | 35.0% | |
| CATATACACCACTTTGATCA+TGG | - | Chr8:15473141-15473160 | MsG0880042890.01.T01:intron | 35.0% | |
| GAGACTTAAGAGTTGTTTGT+TGG | - | Chr8:15472892-15472911 | MsG0880042890.01.T01:intron | 35.0% | |
| GATAAACAATGTTGGAACCA+AGG | + | Chr8:15475114-15475133 | None:intergenic | 35.0% | |
| GCCATCTTCATATGTTCAAA+GGG | - | Chr8:15474183-15474202 | MsG0880042890.01.T01:intron | 35.0% | |
| GGATTGTGGTAAGAAATGAA+AGG | + | Chr8:15472794-15472813 | None:intergenic | 35.0% | |
| GTTTGGTAAGAATGGAGAAA+GGG | + | Chr8:15473406-15473425 | None:intergenic | 35.0% | |
| TAAAAGAAGTAGAGGGATTG+TGG | + | Chr8:15472808-15472827 | None:intergenic | 35.0% | |
| TAAATGTGGTCAACTCACTA+TGG | - | Chr8:15475033-15475052 | MsG0880042890.01.T01:CDS | 35.0% | |
| TCATGTTCCAAATCTCAACA+AGG | - | Chr8:15474013-15474032 | MsG0880042890.01.T01:CDS | 35.0% | |
| TCTTATTCCGCTTCTTCTTA+TGG | - | Chr8:15473016-15473035 | MsG0880042890.01.T01:intron | 35.0% | |
| TGCCATCTTCATATGTTCAA+AGG | - | Chr8:15474182-15474201 | MsG0880042890.01.T01:intron | 35.0% | |
| TGTGATGTTTAGGTGAAGAA+TGG | + | Chr8:15474913-15474932 | None:intergenic | 35.0% | |
| TGTTGTTCCTTGTTGAGATT+TGG | + | Chr8:15474023-15474042 | None:intergenic | 35.0% | |
| TTGTGGTAAGAAATGAAAGG+TGG | + | Chr8:15472791-15472810 | None:intergenic | 35.0% | |
| TTTGGTAAGAATGGAGAAAG+GGG | + | Chr8:15473405-15473424 | None:intergenic | 35.0% | |
| ! | AAAGGCTGGTCAATTGATAA+AGG | - | Chr8:15474857-15474876 | MsG0880042890.01.T01:CDS | 35.0% |
| ! | ATATTGCTGTTGAACGCAAT+AGG | - | Chr8:15474116-15474135 | MsG0880042890.01.T01:CDS | 35.0% |
| ! | ATGAGGATGAATTTGGAGTT+TGG | + | Chr8:15473423-15473442 | None:intergenic | 35.0% |
| ! | TTTGGGGTATTACTCATATG+GGG | - | Chr8:15472993-15473012 | MsG0880042890.01.T01:intron | 35.0% |
| ! | TTTGTATACAAGGGCATGTT+TGG | - | Chr8:15474316-15474335 | MsG0880042890.01.T01:intron | 35.0% |
| !! | ACTTGTTGTGAATCCATTCT+AGG | + | Chr8:15473833-15473852 | None:intergenic | 35.0% |
| AAGAGTTGAGTTTGTCCACA+AGG | - | Chr8:15475210-15475229 | MsG0880042890.01.T01:intron | 40.0% | |
| ACTCTACTCCTTCAATCTCA+AGG | - | Chr8:15474950-15474969 | MsG0880042890.01.T01:CDS | 40.0% | |
| ATGACCACCTTAGTGTTCTT+AGG | - | Chr8:15474152-15474171 | MsG0880042890.01.T01:intron | 40.0% | |
| ATGTAAGCTATGTCTTCCCA+TGG | + | Chr8:15473809-15473828 | None:intergenic | 40.0% | |
| CACTAAGGTGGTCATTCATT+TGG | + | Chr8:15474147-15474166 | None:intergenic | 40.0% | |
| CTCCTCCAATTATTGATGCT+TGG | + | Chr8:15474605-15474624 | None:intergenic | 40.0% | |
| GACCAAGCATCAATAATTGG+AGG | - | Chr8:15474600-15474619 | MsG0880042890.01.T01:CDS | 40.0% | |
| GAGCTAATGCTATGAGTATG+AGG | - | Chr8:15475242-15475261 | MsG0880042890.01.T01:intron | 40.0% | |
| GGCAGCTCATAGATTAACTA+AGG | - | Chr8:15475634-15475653 | MsG0880042890.01.T01:five_prime_UTR | 40.0% | |
| GGTGACCAAGCATCAATAAT+TGG | - | Chr8:15474597-15474616 | MsG0880042890.01.T01:CDS | 40.0% | |
| TATGAGGAGACAAGCAAATG+AGG | - | Chr8:15475613-15475632 | MsG0880042890.01.T01:five_prime_UTR | 40.0% | |
| TGAGAGACCTAAGAACACTA+AGG | + | Chr8:15474162-15474181 | None:intergenic | 40.0% | |
| TTTGTCCACAAGGTAAAAGC+TGG | - | Chr8:15475220-15475239 | MsG0880042890.01.T01:intron | 40.0% | |
| ! | CTTGCTATCTAAGCAAAACC+TGG | - | Chr8:15475085-15475104 | MsG0880042890.01.T01:CDS | 40.0% |
| AAGCCTCTCCATGATCAAAG+TGG | + | Chr8:15473152-15473171 | None:intergenic | 45.0% | |
| ACAAGTTCAAGGCGCAACAT+TGG | - | Chr8:15473847-15473866 | MsG0880042890.01.T01:CDS | 45.0% | |
| ACACCACTTTGATCATGGAG+AGG | - | Chr8:15473146-15473165 | MsG0880042890.01.T01:intron | 45.0% | |
| GAGACCTAAGAACACTAAGG+TGG | + | Chr8:15474159-15474178 | None:intergenic | 45.0% | |
| TAAGCAAAACCTGGCTTCCT+TGG | - | Chr8:15475094-15475113 | MsG0880042890.01.T01:CDS | 45.0% | |
| TCATCATCACCGCCTAGTTA+TGG | - | Chr8:15474717-15474736 | MsG0880042890.01.T01:CDS | 45.0% | |
| TTGATCATGGAGAGGCTTCA+AGG | - | Chr8:15473154-15473173 | MsG0880042890.01.T01:intron | 45.0% | |
| ! | TAGCTCCAGCTTTTACCTTG+TGG | + | Chr8:15475228-15475247 | None:intergenic | 45.0% |
| !! | TTAAACTAAAATAATTTAAT+CGG | - | Chr8:15475471-15475490 | MsG0880042890.01.T01:intron | 5.0% |
| !!! | AAATTTACTAATTTTAAATA+TGG | + | Chr8:15475176-15475195 | None:intergenic | 5.0% |
| !!! | TTATTTTATTTTTTTAAATG+TGG | - | Chr8:15475019-15475038 | MsG0880042890.01.T01:CDS | 5.0% |
| AGGGTGACCAACATTCCGTA+TGG | + | Chr8:15473083-15473102 | None:intergenic | 50.0% | |
| ATGTTGGAACCAAGGAAGCC+AGG | + | Chr8:15475106-15475125 | None:intergenic | 50.0% | |
| ! | AGGCGGTGATGATGATGATG+AGG | + | Chr8:15474712-15474731 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 15472769 | 15475979 | 15472769 | ID=MsG0880042890.01;Name=MsG0880042890.01 |
| Chr8 | mRNA | 15472769 | 15475979 | 15472769 | ID=MsG0880042890.01.T01;Parent=MsG0880042890.01;Name=MsG0880042890.01.T01;_AED=0.31;_eAED=0.32;_QI=391|0.66|0.5|1|0.33|0|4|0|402 |
| Chr8 | exon | 15472769 | 15472876 | 15472769 | ID=MsG0880042890.01.T01:exon:37008;Parent=MsG0880042890.01.T01 |
| Chr8 | exon | 15473687 | 15474151 | 15473687 | ID=MsG0880042890.01.T01:exon:37007;Parent=MsG0880042890.01.T01 |
| Chr8 | exon | 15474544 | 15475146 | 15474544 | ID=MsG0880042890.01.T01:exon:37006;Parent=MsG0880042890.01.T01 |
| Chr8 | exon | 15475556 | 15475979 | 15475556 | ID=MsG0880042890.01.T01:exon:37005;Parent=MsG0880042890.01.T01 |
| Chr8 | five_prime_UTR | 15475589 | 15475979 | 15475589 | ID=MsG0880042890.01.T01:five_prime_utr;Parent=MsG0880042890.01.T01 |
| Chr8 | CDS | 15475556 | 15475588 | 15475556 | ID=MsG0880042890.01.T01:cds;Parent=MsG0880042890.01.T01 |
| Chr8 | CDS | 15474544 | 15475146 | 15474544 | ID=MsG0880042890.01.T01:cds;Parent=MsG0880042890.01.T01 |
| Chr8 | CDS | 15473687 | 15474151 | 15473687 | ID=MsG0880042890.01.T01:cds;Parent=MsG0880042890.01.T01 |
| Chr8 | CDS | 15472769 | 15472876 | 15472769 | ID=MsG0880042890.01.T01:cds;Parent=MsG0880042890.01.T01 |
| Gene Sequence |
| Protein sequence |
