AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380016368.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016368.01.T01 MTR_3g088590 94.747 495 7 1 1 495 1 476 0.0 966
MsG0380016368.01.T01 MTR_2g100510 53.808 407 169 1 85 491 42 429 5.26e-157 454
MsG0380016368.01.T01 MTR_8g062790 52.153 418 179 2 73 490 28 424 9.08e-157 452
MsG0380016368.01.T01 MTR_2g100560 53.071 407 172 1 85 491 47 434 6.32e-152 441
MsG0380016368.01.T01 MTR_2g097540 50.856 409 182 1 85 493 38 427 1.84e-150 437
MsG0380016368.01.T01 MTR_2g097530 51.597 407 178 1 85 491 42 429 1.83e-147 429
MsG0380016368.01.T01 MTR_8g015510 53.155 412 172 3 85 494 39 431 1.89e-147 429
MsG0380016368.01.T01 MTR_8g075310 50.361 415 170 3 73 487 35 413 4.33e-146 425
MsG0380016368.01.T01 MTR_2g100520 49.755 408 186 1 84 491 41 429 3.29e-144 421
MsG0380016368.01.T01 MTR_3g093030 49.765 426 189 3 69 494 18 418 4.05e-142 415
MsG0380016368.01.T01 MTR_8g015510 51.672 329 138 3 168 494 2 311 4.30e-108 325
MsG0380016368.01.T01 MTR_8g063060 40.248 323 142 9 165 484 58 332 6.55e-69 225
MsG0380016368.01.T01 MTR_2g100550 66.393 122 41 0 85 206 38 159 1.01e-48 177
MsG0380016368.01.T01 MTR_1g028070 44.737 114 63 0 198 311 14 127 1.46e-27 107
MsG0380016368.01.T01 MTR_3g093040 53.846 104 37 2 180 272 1 104 5.02e-24 102
MsG0380016368.01.T01 MTR_3g077040 37.313 134 60 2 180 313 1 110 7.35e-17 77.0
MsG0380016368.01.T01 MTR_1205s0010 27.807 187 108 5 295 479 2 163 9.41e-14 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016368.01.T01 AT1G44350 68.646 421 108 2 73 493 65 461 0.0 592
MsG0380016368.01.T01 AT1G51760 53.301 409 172 1 85 493 36 425 2.63e-159 459
MsG0380016368.01.T01 AT5G56660 53.171 410 170 3 84 493 38 425 4.00e-154 446
MsG0380016368.01.T01 AT3G02875 50.239 418 189 1 78 495 33 431 5.63e-149 433
MsG0380016368.01.T01 AT5G56650 52.812 409 171 3 85 493 38 424 2.94e-147 429
MsG0380016368.01.T01 AT1G51780 51.597 407 178 1 85 491 36 423 9.94e-146 425
MsG0380016368.01.T01 AT5G54140 49.875 401 181 2 95 494 39 420 1.66e-132 390
MsG0380016368.01.T01 AT5G56650 59.926 272 107 1 85 356 38 307 8.91e-112 333
MsG0380016368.01.T01 AT3G02875 53.082 292 137 0 78 369 33 324 4.23e-106 320
MsG0380016368.01.T01 AT3G02875 55.556 243 108 0 78 320 33 275 1.39e-93 287

Find 140 sgRNAs with CRISPR-Local

Find 497 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATCAACCGTTACAATTC+TGG 0.191569 3:-82556298 MsG0380016368.01.T01:CDS
TGCTGGGTCAAAAGAATTTC+AGG 0.191754 3:-82549126 MsG0380016368.01.T01:CDS
GAGCACCCGACTGGTATAAT+TGG 0.212441 3:-82549820 MsG0380016368.01.T01:CDS
AACTCGAGAGCATTTATTAA+AGG 0.223748 3:-82554667 MsG0380016368.01.T01:intron
GTGTCTGTAACTTCATTTAA+TGG 0.238506 3:-82549507 MsG0380016368.01.T01:CDS
GCACATGTGGCGATGCTTAT+TGG 0.256111 3:-82554708 MsG0380016368.01.T01:CDS
CCTTCAGCTTTCTTCTACAT+AGG 0.313798 3:-82549049 MsG0380016368.01.T01:CDS
TAACTCTGCTGATCCTGTTT+TGG 0.324084 3:-82549713 MsG0380016368.01.T01:CDS
AAAAGTGTCCATCGATTTGC+TGG 0.355639 3:-82549143 MsG0380016368.01.T01:CDS
TACCAGCTTCTTCTGCTGGC+TGG 0.385270 3:+82549917 None:intergenic
TCGAGAGTTGGGACAATAGT+AGG 0.397142 3:+82549286 None:intergenic
CAATTACCTGTTCGAGAGTT+GGG 0.401579 3:+82549275 None:intergenic
CGGTGACAAACTGCGAAGTT+TGG 0.403236 3:-82556134 MsG0380016368.01.T01:CDS
GCAGCTGAAGCTGCCAAAAC+AGG 0.403249 3:+82549700 None:intergenic
CCGGCAAAATGCACGCTTGT+GGG 0.404951 3:-82554737 MsG0380016368.01.T01:CDS
AGTTTGGAACGAAGCATGTT+CGG 0.420216 3:-82556118 MsG0380016368.01.T01:CDS
AAAATCCACATCCAGCCAAC+AGG 0.421794 3:+82549782 None:intergenic
CAGGGTAGTCCCTCCTATGA+TGG 0.423681 3:-82549107 MsG0380016368.01.T01:CDS
GGACCCCTGTTGGCTGGATG+TGG 0.424436 3:-82549787 MsG0380016368.01.T01:CDS
TAATCTTCAGCACCCATCAT+AGG 0.427024 3:+82549094 None:intergenic
CCATTACCAGCTTCTTCTGC+TGG 0.433623 3:+82549913 None:intergenic
AGCTGCAGTTATCAGCATAC+AGG 0.434234 3:-82549683 MsG0380016368.01.T01:CDS
CTTTCTTCTACATAGGGATA+AGG 0.436952 3:-82549042 MsG0380016368.01.T01:CDS
GTTACGAGGGTTTGCGGCAG+AGG 0.437592 3:+82549732 None:intergenic
AGACCTGGACCCCTGTTGGC+TGG 0.438554 3:-82549793 MsG0380016368.01.T01:CDS
CGTTACCCGCTCGCGAAAAC+CGG 0.438659 3:-82555943 MsG0380016368.01.T01:CDS
AAAAGTAAAACAAAGAGTTT+CGG 0.439627 3:+82556331 None:intergenic
AATGATACAAGACGGTGCTT+TGG 0.442613 3:-82549881 MsG0380016368.01.T01:CDS
ATTTCTAATGTGAGTGCAAA+TGG 0.444706 3:-82549330 MsG0380016368.01.T01:intron
CGGTCCACCCGTACCGATCC+AGG 0.445024 3:+82555912 None:intergenic
CTTCAGCTTTCTTCTACATA+GGG 0.448301 3:-82549048 MsG0380016368.01.T01:CDS
AGAAGTTGACTTCTTTGAAA+AGG 0.448436 3:-82549221 MsG0380016368.01.T01:CDS
CGAACAGGTAATTGTGCAAC+AGG 0.453847 3:-82549266 MsG0380016368.01.T01:CDS
CCACCAATGACCACTGAGTC+TGG 0.459562 3:+82549462 None:intergenic
CATCCAGCCAACAGGGGTCC+AGG 0.460340 3:+82549790 None:intergenic
GCTCTATTCTTTCTAGCAGC+TGG 0.461269 3:+82549406 None:intergenic
TTCAACCACTCCACCGTCTC+CGG 0.468135 3:+82556069 None:intergenic
AGCAGAGTTACGAGGGTTTG+CGG 0.469164 3:+82549726 None:intergenic
TACAATTCTGGAACACTTCG+CGG 0.472537 3:-82556286 MsG0380016368.01.T01:CDS
TATTGTCCCAACTCTCGAAC+AGG 0.473898 3:-82549281 MsG0380016368.01.T01:CDS
CTCCCGCGAATCAAATCCAT+TGG 0.474642 3:-82549653 MsG0380016368.01.T01:CDS
GATACAAGACGGTGCTTTGG+AGG 0.475204 3:-82549878 MsG0380016368.01.T01:CDS
TTATACCAGTCGGGTGCTCA+TGG 0.477688 3:+82549824 None:intergenic
CATGGATGCACTTCCCATCC+AGG 0.479223 3:-82555866 MsG0380016368.01.T01:intron
ATTGTAGGAGGGTGTTGAGT+GGG 0.480937 3:-82554778 MsG0380016368.01.T01:intron
ACCGATCCAGGCGCGAATAC+CGG 0.481491 3:+82555924 None:intergenic
AAGAAAGGAGTTGGATCTGA+TGG 0.482685 3:-82555977 MsG0380016368.01.T01:CDS
AAGGAAGATCCATGAAAATC+CGG 0.485905 3:-82556037 MsG0380016368.01.T01:CDS
AGCACCCGACTGGTATAATT+GGG 0.487049 3:-82549819 MsG0380016368.01.T01:CDS
GTTAAGCGTAGCACAGTTGC+CGG 0.491392 3:-82556088 MsG0380016368.01.T01:CDS
ATCAAATCCATTGGATTCAC+AGG 0.491818 3:-82549644 MsG0380016368.01.T01:intron
GAGTACAAGTCTAAAGTTGC+CGG 0.492102 3:-82554756 MsG0380016368.01.T01:CDS
GGTATAATTGGGTCGAGACC+TGG 0.496308 3:-82549808 MsG0380016368.01.T01:CDS
GACGAGTCGTTTGATAAGAA+AGG 0.507282 3:-82555992 MsG0380016368.01.T01:CDS
CGAAAACCGGTATTCGCGCC+TGG 0.507416 3:-82555930 MsG0380016368.01.T01:CDS
TCGTTTGATAAGAAAGGAGT+TGG 0.510161 3:-82555986 MsG0380016368.01.T01:CDS
AGGGTAGTCCCTCCTATGAT+GGG 0.516534 3:-82549106 MsG0380016368.01.T01:CDS
AAGGATGAGAGTTATGAAGA+AGG 0.516688 3:+82556424 None:intergenic
ATACCAGACTCAGTGGTCAT+TGG 0.517150 3:-82549465 MsG0380016368.01.T01:CDS
ACAATTACCTGTTCGAGAGT+TGG 0.522379 3:+82549274 None:intergenic
ATTCGCGCCTGGATCGGTAC+GGG 0.526999 3:-82555919 MsG0380016368.01.T01:CDS
TATTCGCGCCTGGATCGGTA+CGG 0.527148 3:-82555920 MsG0380016368.01.T01:CDS
AGACGGTGCTTTGGAGGATG+TGG 0.531228 3:-82549872 MsG0380016368.01.T01:CDS
CGTGACACGGAAGGCTAAGA+CGG 0.531811 3:-82556154 MsG0380016368.01.T01:CDS
GTCGAGACCTGGACCCCTGT+TGG 0.532669 3:-82549797 MsG0380016368.01.T01:CDS
AATCCAATGGATTTGATTCG+CGG 0.533440 3:+82549650 None:intergenic
CCAGCAGAAGAAGCTGGTAA+TGG 0.533448 3:-82549913 MsG0380016368.01.T01:CDS
ACCGGTATTCGCGCCTGGAT+CGG 0.533833 3:-82555925 MsG0380016368.01.T01:CDS
TAGAAGTGCAATCACCTGGA+TGG 0.537823 3:+82555852 None:intergenic
GAACGAAGCATGTTCGGAAG+CGG 0.538563 3:-82556112 MsG0380016368.01.T01:CDS
TGTTGCTGTTAGAGCTGACA+TGG 0.540599 3:-82555884 MsG0380016368.01.T01:CDS
CCAGACTCAGTGGTCATTGG+TGG 0.543153 3:-82549462 MsG0380016368.01.T01:CDS
GGAAGAAAGTACAGAAAGCA+AGG 0.543987 3:+82556382 None:intergenic
AGAAGTGCAATCACCTGGAT+GGG 0.547453 3:+82555853 None:intergenic
GCTGGGTCAAAAGAATTTCA+GGG 0.548098 3:-82549125 MsG0380016368.01.T01:CDS
GCCGGCAAAATGCACGCTTG+TGG 0.548294 3:-82554738 MsG0380016368.01.T01:CDS
AGCAAGGAACATATAGAGAG+GGG 0.549080 3:+82556398 None:intergenic
TCGACCCAATTATACCAGTC+GGG 0.552443 3:+82549815 None:intergenic
ATCCAATGGATTTGATTCGC+GGG 0.553047 3:+82549651 None:intergenic
GCTGCTAGAAAGAATAGAGC+AGG 0.556046 3:-82549403 MsG0380016368.01.T01:intron
GTCAGCTCTAACAGCAACAA+AGG 0.556733 3:+82555888 None:intergenic
TCTTCAGCACCCATCATAGG+AGG 0.564963 3:+82549097 None:intergenic
TTCCAGCCAGCAGAAGAAGC+TGG 0.566596 3:-82549919 MsG0380016368.01.T01:CDS
CGTAGCACAGTTGCCGGAGA+CGG 0.570818 3:-82556082 MsG0380016368.01.T01:CDS
CATTGTAGGAGGGTGTTGAG+TGG 0.571720 3:-82554779 MsG0380016368.01.T01:intron
TGGTCATCATTAACCGTGGG+AGG 0.572106 3:+82549184 None:intergenic
CTCGACCCAATTATACCAGT+CGG 0.572631 3:+82549814 None:intergenic
GAGATCAACCATGTTCATTG+AGG 0.577750 3:+82548912 None:intergenic
TATACCAGTCGGGTGCTCAT+GGG 0.580200 3:+82549825 None:intergenic
AAATCCACATCCAGCCAACA+GGG 0.580380 3:+82549783 None:intergenic
GGTGTTAGAAAACGCTCTGA+AGG 0.580387 3:+82549437 None:intergenic
GGGATAAGGAATGAAACACT+AGG 0.581663 3:-82549028 MsG0380016368.01.T01:CDS
ATTTCCTCAAAAGCTAACTC+CGG 0.582969 3:+82556018 None:intergenic
GTATCCCATGAGCACCCGAC+TGG 0.585430 3:-82549829 MsG0380016368.01.T01:CDS
TCAGCTCTAACAGCAACAAA+GGG 0.589082 3:+82555889 None:intergenic
GGCAATACCTGTGAATCCAA+TGG 0.593035 3:+82549637 None:intergenic
GATGAAGATGCTCTACCGAT+AGG 0.594547 3:-82548968 MsG0380016368.01.T01:CDS
ATTGAGGTACCTCTCTGCAA+TGG 0.594556 3:+82548928 None:intergenic
GAATAAAACACGGTCGTAAG+CGG 0.595337 3:+82556236 None:intergenic
GCATGAACAGCAGCTCCTAT+CGG 0.597884 3:+82548953 None:intergenic
AGCACAGTTGCCGGAGACGG+TGG 0.598476 3:-82556079 MsG0380016368.01.T01:CDS
AAGCAAGGAACATATAGAGA+GGG 0.600649 3:+82556397 None:intergenic
GAGGTACCTCTCTGCAATGG+TGG 0.601539 3:+82548931 None:intergenic
CGCGCCTGGATCGGTACGGG+TGG 0.602749 3:-82555916 MsG0380016368.01.T01:CDS
CGGTGCTTTGGAGGATGTGG+AGG 0.603018 3:-82549869 MsG0380016368.01.T01:CDS
AGAAAGCTGAAGGAATGACC+TGG 0.604705 3:+82549059 None:intergenic
AGTTGCCGGAGACGGTGGAG+TGG 0.607589 3:-82556074 MsG0380016368.01.T01:CDS
CCTATGTAGAAGAAAGCTGA+AGG 0.611074 3:+82549049 None:intergenic
TCTTCATCAATCATGAAATG+TGG 0.612062 3:+82548983 None:intergenic
TCTGTAACTTCATTTAATGG+AGG 0.613388 3:-82549504 MsG0380016368.01.T01:CDS
ACACGGTCGTAAGCGGCGGA+AGG 0.615680 3:+82556243 None:intergenic
TTGTGGGCACGACGCACATG+TGG 0.617838 3:-82554721 MsG0380016368.01.T01:CDS
CATTTGGTCATCATTAACCG+TGG 0.620831 3:+82549180 None:intergenic
GAAAGCTGAAGGAATGACCT+GGG 0.621446 3:+82549060 None:intergenic
CAGGATCAGCAGAGTTACGA+GGG 0.623679 3:+82549719 None:intergenic
GAGAGGTACCTCAATGAACA+TGG 0.623955 3:-82548920 MsG0380016368.01.T01:CDS
ATTTGGTCATCATTAACCGT+GGG 0.624369 3:+82549181 None:intergenic
GGTCATCATTAACCGTGGGA+GGG 0.627405 3:+82549185 None:intergenic
GGATAAGGAATGAAACACTA+GGG 0.628755 3:-82549027 MsG0380016368.01.T01:CDS
GTACACTATTTACCCTCCCA+CGG 0.629998 3:-82549197 MsG0380016368.01.T01:CDS
GCTCTAACAGCAACAAAGGG+CGG 0.633994 3:+82555892 None:intergenic
GCTGCAGTTATCAGCATACA+GGG 0.634727 3:-82549682 MsG0380016368.01.T01:CDS
GAAGTGTTCCAGAATTGTAA+CGG 0.637732 3:+82556290 None:intergenic
GCAAGGAACATATAGAGAGG+GGG 0.648260 3:+82556399 None:intergenic
TAAAACACGGTCGTAAGCGG+CGG 0.649031 3:+82556239 None:intergenic
AAAGCAAGGAACATATAGAG+AGG 0.653364 3:+82556396 None:intergenic
AAAGTGTCCATCGATTTGCT+GGG 0.656755 3:-82549142 MsG0380016368.01.T01:CDS
AGTGGTTGAAAAGTGTTCGA+AGG 0.657989 3:-82556056 MsG0380016368.01.T01:CDS
TTTATCGCAGCATCTCCGAT+CGG 0.659369 3:+82556212 None:intergenic
CTTCAGCACCCATCATAGGA+GGG 0.659534 3:+82549098 None:intergenic
CAGACTCAGTGGTCATTGGT+GGG 0.661149 3:-82549461 MsG0380016368.01.T01:CDS
ACAGGATCAGCAGAGTTACG+AGG 0.661867 3:+82549718 None:intergenic
GCAAAGCGAATGATACAAGA+CGG 0.669852 3:-82549889 MsG0380016368.01.T01:CDS
ACACTAGGGTCTACTCACAC+AGG 0.673988 3:-82549013 MsG0380016368.01.T01:CDS
CAAGGAACATATAGAGAGGG+GGG 0.674440 3:+82556400 None:intergenic
AAGGAGAATTCGAACACGTG+CGG 0.676224 3:+82556468 None:intergenic
TGACATGATACCAGACTCAG+TGG 0.696436 3:-82549472 MsG0380016368.01.T01:CDS
AATCCACATCCAGCCAACAG+GGG 0.699921 3:+82549784 None:intergenic
TTCATGCCACCATTGCAGAG+AGG 0.728117 3:-82548937 MsG0380016368.01.T01:CDS
TCCGATCGGAGAATAAAACA+CGG 0.764715 3:+82556226 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATATAAATTAATATTT+AGG + Chr3:82549260-82549279 None:intergenic 0.0%
!! TAAATATAAATTAATATTTA+GGG + Chr3:82549259-82549278 None:intergenic 0.0%
!!! TTTTTTTTTTTTTTATAAAA+TGG - Chr3:82552996-82553015 MsG0380016368.01.T01:intron 0.0%
!! AAAAAAAGTTAAATAACAAA+AGG + Chr3:82554297-82554316 None:intergenic 10.0%
!! TAATCACATAAAATATAAAT+CGG - Chr3:82552023-82552042 MsG0380016368.01.T01:intron 10.0%
!! TATTTATTACTTTATATTGT+GGG + Chr3:82551878-82551897 None:intergenic 10.0%
!! TTATTTATTACTTTATATTG+TGG + Chr3:82551879-82551898 None:intergenic 10.0%
!!! AAATTAAACTTTTTAATTCA+TGG + Chr3:82551202-82551221 None:intergenic 10.0%
!!! ATATAATTTTTTTAAGAGTT+GGG - Chr3:82554132-82554151 MsG0380016368.01.T01:intron 10.0%
!!! ATTTTTTTTATCAAAATCAA+AGG - Chr3:82553804-82553823 MsG0380016368.01.T01:intron 10.0%
!!! TAAAAGAACTTTAAAAAATT+TGG + Chr3:82549871-82549890 None:intergenic 10.0%
!!! TATATAATTTTTTTAAGAGT+TGG - Chr3:82554131-82554150 MsG0380016368.01.T01:intron 10.0%
!!! TTCATAATAAAGTTTTTTTT+TGG - Chr3:82549132-82549151 MsG0380016368.01.T01:CDS 10.0%
!! AAAATTAAATAATACAGCTA+AGG + Chr3:82551472-82551491 None:intergenic 15.0%
!! GAATTTAGTTAAACTAATAA+GGG - Chr3:82549613-82549632 MsG0380016368.01.T01:intron 15.0%
!! TAAATGTAAAATGACATAAA+AGG - Chr3:82549099-82549118 MsG0380016368.01.T01:CDS 15.0%
!! TCTATATGTAAGTTTATATA+TGG - Chr3:82553157-82553176 MsG0380016368.01.T01:intron 15.0%
!!! AATTATGGTTGTTTTTTTTA+GGG - Chr3:82552630-82552649 MsG0380016368.01.T01:intron 15.0%
!!! ACTGATTTTGATTTTTATAA+AGG + Chr3:82553854-82553873 None:intergenic 15.0%
!!! ATATAGAAATAACTTTTGTT+TGG + Chr3:82551824-82551843 None:intergenic 15.0%
!!! GTATAAACTTATTGATTAAA+AGG + Chr3:82552079-82552098 None:intergenic 15.0%
!!! TAATTATGGTTGTTTTTTTT+AGG - Chr3:82552629-82552648 MsG0380016368.01.T01:intron 15.0%
!!! TCAATTTAACTAAAGATTTT+AGG - Chr3:82556008-82556027 MsG0380016368.01.T01:CDS 15.0%
!!! TTACACTTTGAAAAAAATAA+TGG - Chr3:82555784-82555803 MsG0380016368.01.T01:intron 15.0%
!! AAAAAAAAAACGTTATGAGA+CGG - Chr3:82549364-82549383 MsG0380016368.01.T01:intron 20.0%
!! AAAAGTAAAACAAAGAGTTT+CGG + Chr3:82550032-82550051 None:intergenic 20.0%
!! AAATAAAAATAGTAGTAGAG+TGG + Chr3:82550548-82550567 None:intergenic 20.0%
!! AATTAATAAATCTGCAAATG+TGG + Chr3:82554452-82554471 None:intergenic 20.0%
!! ATAATACAATGAGTGTTAAA+GGG - Chr3:82549581-82549600 MsG0380016368.01.T01:intron 20.0%
!! ATAGAATCATTAATAACAAG+TGG + Chr3:82551369-82551388 None:intergenic 20.0%
!! CAATAAAATTGATAAATGAC+AGG + Chr3:82555855-82555874 None:intergenic 20.0%
!! GGAATTTAGTTAAACTAATA+AGG - Chr3:82549612-82549631 MsG0380016368.01.T01:intron 20.0%
!! TAAACTAATAAGGGTAAAAA+TGG - Chr3:82549622-82549641 MsG0380016368.01.T01:intron 20.0%
!! TAAACTATAAAATTTGAGAG+AGG - Chr3:82554418-82554437 MsG0380016368.01.T01:intron 20.0%
!! TAAATTCTTGAAACACTTTA+TGG + Chr3:82551432-82551451 None:intergenic 20.0%
!! TACGTTTATATGGTTATTTA+CGG - Chr3:82553982-82554001 MsG0380016368.01.T01:intron 20.0%
!! TAGAATCATTAATAACAAGT+GGG + Chr3:82551368-82551387 None:intergenic 20.0%
!! TATAATACAATGAGTGTTAA+AGG - Chr3:82549580-82549599 MsG0380016368.01.T01:intron 20.0%
!! TCAAAGATGAGTAATAATTA+TGG - Chr3:82552615-82552634 MsG0380016368.01.T01:intron 20.0%
!! TGCATTATTGATATAAAGTT+TGG - Chr3:82552830-82552849 MsG0380016368.01.T01:intron 20.0%
!! TGTCGTATCAAAAATAATTA+AGG - Chr3:82553577-82553596 MsG0380016368.01.T01:intron 20.0%
!! TTACAATTTACATTCATTGA+TGG - Chr3:82552308-82552327 MsG0380016368.01.T01:intron 20.0%
!! TTATATTAAGCTTGATATCA+TGG - Chr3:82553653-82553672 MsG0380016368.01.T01:intron 20.0%
!! TTGCACAAAAAAAAAATTGT+GGG - Chr3:82554859-82554878 MsG0380016368.01.T01:intron 20.0%
!! TTTAACAAAATGATAGTAGT+AGG - Chr3:82552147-82552166 MsG0380016368.01.T01:intron 20.0%
!!! AAAATACTCCTTTTTTTAGA+AGG + Chr3:82555748-82555767 None:intergenic 20.0%
!!! AATGGTTCTTATATGATTTT+TGG - Chr3:82553014-82553033 MsG0380016368.01.T01:intron 20.0%
!!! AGAACTTTAAAAAATTTGGA+CGG + Chr3:82549867-82549886 None:intergenic 20.0%
!!! ATCTAACTTTTGTAGAATTA+AGG + Chr3:82553705-82553724 None:intergenic 20.0%
!!! ATCTTTTAGTTTTAAATCCT+TGG - Chr3:82551785-82551804 MsG0380016368.01.T01:intron 20.0%
!!! ATGATTCTATTAATTTCTAG+AGG - Chr3:82551379-82551398 MsG0380016368.01.T01:intron 20.0%
!!! ATGTTTTTTTTTTGTCAAGA+GGG + Chr3:82555544-82555563 None:intergenic 20.0%
!!! ATTGTGTTTTTTCATAATGT+TGG - Chr3:82551238-82551257 MsG0380016368.01.T01:intron 20.0%
!!! CATTTTAAAACAAATGAAGT+TGG - Chr3:82555939-82555958 MsG0380016368.01.T01:CDS 20.0%
!!! CGAAAATATTTTTAAAAAGC+TGG + Chr3:82556163-82556182 None:intergenic 20.0%
!!! CTTATTATATTACTGTTTCT+AGG + Chr3:82550667-82550686 None:intergenic 20.0%
!!! GAATTTTTAATGGTTTGTAA+GGG - Chr3:82554914-82554933 MsG0380016368.01.T01:intron 20.0%
!!! GGTAAAATTGGAATTTTTAA+TGG - Chr3:82554904-82554923 MsG0380016368.01.T01:intron 20.0%
!!! GTTCAAAAAGTACAAATATT+TGG + Chr3:82553532-82553551 None:intergenic 20.0%
!!! GTTTGAGTTATTATTATAGA+TGG + Chr3:82555065-82555084 None:intergenic 20.0%
!!! TAAGGAAACAATATTTTCAA+TGG + Chr3:82556137-82556156 None:intergenic 20.0%
!!! TATAGCTTCTTCAATTTTTT+TGG - Chr3:82555023-82555042 MsG0380016368.01.T01:intron 20.0%
!!! TCAACAAGGTTTTATATTAA+AGG + Chr3:82552111-82552130 None:intergenic 20.0%
!!! TCTAACTTTTGTAGAATTAA+GGG + Chr3:82553704-82553723 None:intergenic 20.0%
!!! TTAAGTGATGAATTTGTTAT+AGG + Chr3:82552502-82552521 None:intergenic 20.0%
!!! TTCAAGCTTTAAATATTTCA+TGG + Chr3:82551339-82551358 None:intergenic 20.0%
!!! TTCATTTTTTTTATGCAACT+TGG - Chr3:82550714-82550733 MsG0380016368.01.T01:intron 20.0%
!!! TTCTGAAATCTTAAGTTTTT+TGG - Chr3:82554384-82554403 MsG0380016368.01.T01:intron 20.0%
!!! TTTCTCAACTTTCATTTTTA+GGG - Chr3:82553398-82553417 MsG0380016368.01.T01:intron 20.0%
!!! TTTTCTCAACTTTCATTTTT+AGG - Chr3:82553397-82553416 MsG0380016368.01.T01:intron 20.0%
!!! TTTTGTTTTATTCTTTCAGT+TGG + Chr3:82550002-82550021 None:intergenic 20.0%
!!! TTTTTTAGGGATAATAGTTA+TGG - Chr3:82552643-82552662 MsG0380016368.01.T01:intron 20.0%
! AATAGAGACAAATAGTTAGT+TGG + Chr3:82556820-82556839 None:intergenic 25.0%
! AATGATAAAAGGGGTAAAAT+TGG - Chr3:82554892-82554911 MsG0380016368.01.T01:intron 25.0%
! AATTCATTTGATTGGTATCA+CGG - Chr3:82554559-82554578 MsG0380016368.01.T01:intron 25.0%
! ACGGAAATTAGAACAAAAAT+GGG - Chr3:82554578-82554597 MsG0380016368.01.T01:intron 25.0%
! ACTAGTCATTGAAACAAATA+TGG + Chr3:82555639-82555658 None:intergenic 25.0%
! ATAGAGACAAATAGTTAGTT+GGG + Chr3:82556819-82556838 None:intergenic 25.0%
! ATCTTTCTCACAAAAGATTA+TGG - Chr3:82550817-82550836 MsG0380016368.01.T01:intron 25.0%
! CAAAGACAACTTTATTCATA+AGG + Chr3:82555333-82555352 None:intergenic 25.0%
! CTTGCACAAAAAAAAAATTG+TGG - Chr3:82554858-82554877 MsG0380016368.01.T01:intron 25.0%
! GACTTACAAAAAATTGTTAC+TGG - Chr3:82553214-82553233 MsG0380016368.01.T01:intron 25.0%
! GATAAAAAATGCTAAGTTCA+AGG + Chr3:82556392-82556411 None:intergenic 25.0%
! GGTTAACCAATAAAAAGTTT+CGG - Chr3:82552329-82552348 MsG0380016368.01.T01:intron 25.0%
! TAAGCACTAATTCATTTGAT+TGG - Chr3:82554551-82554570 MsG0380016368.01.T01:intron 25.0%
! TCATTGAAATTGAGTAACTT+TGG + Chr3:82554733-82554752 None:intergenic 25.0%
! TGCACAAAAAAAAAATTGTG+GGG - Chr3:82554860-82554879 MsG0380016368.01.T01:intron 25.0%
! TGTGATTATATAAGCAATTC+TGG + Chr3:82552011-82552030 None:intergenic 25.0%
! TTAAAGAGAAAAGATGATGT+TGG - Chr3:82555405-82555424 MsG0380016368.01.T01:intron 25.0%
! TTCAATTTCTTGTGAAAGTT+AGG + Chr3:82551526-82551545 None:intergenic 25.0%
! TTGTCATGTTACTCATAATT+CGG + Chr3:82551157-82551176 None:intergenic 25.0%
!! AAACCATGAAACATCAATTT+TGG - Chr3:82553488-82553507 MsG0380016368.01.T01:intron 25.0%
!! ACATTTACAATGATTTGTAG+GGG + Chr3:82554265-82554284 None:intergenic 25.0%
!! ATAAAAAGTTTCGGCTTTTA+CGG - Chr3:82552338-82552357 MsG0380016368.01.T01:intron 25.0%
!! CACTTTGAAAAAAATAATGG+TGG - Chr3:82555787-82555806 MsG0380016368.01.T01:intron 25.0%
!! CTAACTTTTGTAGAATTAAG+GGG + Chr3:82553703-82553722 None:intergenic 25.0%
!! GACATTTACAATGATTTGTA+GGG + Chr3:82554266-82554285 None:intergenic 25.0%
!! GAGGAATTAAATTGATCTTT+TGG + Chr3:82552469-82552488 None:intergenic 25.0%
!! TAAAAGCCGAAACTTTTTAT+TGG + Chr3:82552338-82552357 None:intergenic 25.0%
!! TAACTTTTGTAGAATTAAGG+GGG + Chr3:82553702-82553721 None:intergenic 25.0%
!! TGACATTTACAATGATTTGT+AGG + Chr3:82554267-82554286 None:intergenic 25.0%
!! TTCTAAGTGTTCTTGTTTAT+CGG + Chr3:82554781-82554800 None:intergenic 25.0%
!! TTGATTCTCCTTCTAAAAAA+AGG - Chr3:82555737-82555756 MsG0380016368.01.T01:intron 25.0%
!! TTTGTCTCTATTTAAAACTC+AGG - Chr3:82556828-82556847 MsG0380016368.01.T01:intron 25.0%
!! TTTGTTGATGAATATTGACT+CGG - Chr3:82555702-82555721 MsG0380016368.01.T01:intron 25.0%
!!! AAATAGTTTTAGTGTGTGTT+TGG + Chr3:82554988-82555007 None:intergenic 25.0%
!!! ACCTTATTTTTTTTAGTGAC+TGG - Chr3:82552694-82552713 MsG0380016368.01.T01:intron 25.0%
!!! AGATGTTTTTAGCTTAATTG+TGG - Chr3:82551497-82551516 MsG0380016368.01.T01:intron 25.0%
!!! AGTTTAATTTTTGCACTTGT+TGG - Chr3:82551212-82551231 MsG0380016368.01.T01:intron 25.0%
!!! ATTTTTTATCTGTCATCACA+GGG - Chr3:82556402-82556421 MsG0380016368.01.T01:five_prime_UTR 25.0%
!!! CAAGGTTTTATATTAAAGGA+AGG + Chr3:82552107-82552126 None:intergenic 25.0%
!!! CAGTTACCATTTTAAAAACA+CGG + Chr3:82556262-82556281 None:intergenic 25.0%
!!! CATGTTTTTTTTTTGTCAAG+AGG + Chr3:82555545-82555564 None:intergenic 25.0%
!!! CCTTATTTTTTTTAGTGACT+GGG - Chr3:82552695-82552714 MsG0380016368.01.T01:intron 25.0%
!!! CTTATTTTTTTTAGTGACTG+GGG - Chr3:82552696-82552715 MsG0380016368.01.T01:intron 25.0%
!!! GGAATTTTTAATGGTTTGTA+AGG - Chr3:82554913-82554932 MsG0380016368.01.T01:intron 25.0%
!!! TATTAAAAGTTTTAGCGAGT+TGG - Chr3:82550855-82550874 MsG0380016368.01.T01:intron 25.0%
!!! TGAAGAGTGTATATTTTTCT+TGG - Chr3:82551264-82551283 MsG0380016368.01.T01:intron 25.0%
!!! TTACGTTTTATTTTCTTCAG+TGG + Chr3:82549443-82549462 None:intergenic 25.0%
AAAGATCTGTCACTATTAAG+TGG + Chr3:82552427-82552446 None:intergenic 30.0%
AAGTTGTCTTTGTCTTCTAT+CGG - Chr3:82555341-82555360 MsG0380016368.01.T01:intron 30.0%
AATAGAATAAGGGTAGTTGT+GGG - Chr3:82554081-82554100 MsG0380016368.01.T01:intron 30.0%
AATCTCTTGTTCATCTTTGA+TGG - Chr3:82554490-82554509 MsG0380016368.01.T01:intron 30.0%
AATGTTCAGTGTTTATCGTA+AGG - Chr3:82555291-82555310 MsG0380016368.01.T01:intron 30.0%
ACAAATTCATCACTTAACAG+TGG - Chr3:82552505-82552524 MsG0380016368.01.T01:intron 30.0%
ACACCAAAATTGATGTTTCA+TGG + Chr3:82553494-82553513 None:intergenic 30.0%
ACCATATAAACGTACAAGAA+TGG + Chr3:82553976-82553995 None:intergenic 30.0%
ACTTTATATTGTGGGATTGA+AGG + Chr3:82551870-82551889 None:intergenic 30.0%
AGAGAGAGAAAGAGAATTTA+GGG + Chr3:82549844-82549863 None:intergenic 30.0%
AGAGATAGTTCGTTTAAGAA+AGG - Chr3:82552221-82552240 MsG0380016368.01.T01:intron 30.0%
AGATAGAAAAAGAAGGAAGA+AGG + Chr3:82549914-82549933 None:intergenic 30.0%
AGTGCTTAACTATTTAATCG+AGG + Chr3:82554539-82554558 None:intergenic 30.0%
ATCAAAGATGAACAAGAGAT+TGG + Chr3:82554491-82554510 None:intergenic 30.0%
ATCACCGTAAATTTGATATG+CGG - Chr3:82553752-82553771 MsG0380016368.01.T01:intron 30.0%
ATCCAAATTCTAAGCATCAT+CGG + Chr3:82555968-82555987 None:intergenic 30.0%
ATCTCTTGTTCATCTTTGAT+GGG - Chr3:82554491-82554510 MsG0380016368.01.T01:intron 30.0%
ATGAGCTTATAGCTTATTTC+AGG + Chr3:82549723-82549742 None:intergenic 30.0%
ATTTCTAATGTGAGTGCAAA+TGG - Chr3:82557030-82557049 MsG0380016368.01.T01:intron 30.0%
CAAATTCATCACTTAACAGT+GGG - Chr3:82552506-82552525 MsG0380016368.01.T01:intron 30.0%
CACGGAAATTAGAACAAAAA+TGG - Chr3:82554577-82554596 MsG0380016368.01.T01:intron 30.0%
CCCAGTCACTAAAAAAAATA+AGG + Chr3:82552698-82552717 None:intergenic 30.0%
CTTAGCAATTGAATGAAACA+AGG - Chr3:82554627-82554646 MsG0380016368.01.T01:intron 30.0%
GACAATGCATAATATATGCA+AGG + Chr3:82552735-82552754 None:intergenic 30.0%
GAGTGTTAAAGGGTAAAAAA+TGG - Chr3:82549591-82549610 MsG0380016368.01.T01:intron 30.0%
GCACAAAAAAAAAATTGTGG+GGG - Chr3:82554861-82554880 MsG0380016368.01.T01:intron 30.0%
GGGTAAAGGATTAATTGTAA+GGG + Chr3:82554245-82554264 None:intergenic 30.0%
GGTGAAGTCAAATGATAAAA+GGG - Chr3:82554882-82554901 MsG0380016368.01.T01:intron 30.0%
GTGAAGTCAAATGATAAAAG+GGG - Chr3:82554883-82554902 MsG0380016368.01.T01:intron 30.0%
GTGTCTGTAACTTCATTTAA+TGG - Chr3:82556853-82556872 MsG0380016368.01.T01:intron 30.0%
GTTCTTTCTTTATTCTCACA+TGG - Chr3:82555167-82555186 MsG0380016368.01.T01:intron 30.0%
TAGAGACAAATAGTTAGTTG+GGG + Chr3:82556818-82556837 None:intergenic 30.0%
TCCATTCTTGTACGTTTATA+TGG - Chr3:82553972-82553991 MsG0380016368.01.T01:intron 30.0%
TCTGTAACTTCATTTAATGG+AGG - Chr3:82556856-82556875 MsG0380016368.01.T01:intron 30.0%
TCTTACTACTATAGGACAAA+CGG - Chr3:82552578-82552597 MsG0380016368.01.T01:intron 30.0%
TCTTCATCAATCATGAAATG+TGG + Chr3:82557380-82557399 None:intergenic 30.0%
TGAAATAAGCTATAAGCTCA+TGG - Chr3:82549722-82549741 MsG0380016368.01.T01:CDS 30.0%
TGCATAATATATGCAAGGTT+CGG + Chr3:82553059-82553078 None:intergenic 30.0%
TGCATTCTTGATAGAAAGTT+TGG - Chr3:82552960-82552979 MsG0380016368.01.T01:intron 30.0%
TGGAGACATACTAATTTCAA+TGG + Chr3:82550638-82550657 None:intergenic 30.0%
TTACGATAAACACTGAACAT+TGG + Chr3:82555292-82555311 None:intergenic 30.0%
TTGACAAAAAAAGCTCTGTT+TGG + Chr3:82549761-82549780 None:intergenic 30.0%
TTTCAATGACTAGTGTTCTT+AGG - Chr3:82555645-82555664 MsG0380016368.01.T01:intron 30.0%
! AAATTTTGCCTGTGCAATAT+TGG - Chr3:82556292-82556311 MsG0380016368.01.T01:CDS 30.0%
! AACGTCTTTAAGAATGGATA+TGG + Chr3:82552376-82552395 None:intergenic 30.0%
! ACTTTGGAGATTCATTTCAA+CGG + Chr3:82554717-82554736 None:intergenic 30.0%
! AGAAGTTGACTTCTTTGAAA+AGG - Chr3:82557139-82557158 MsG0380016368.01.T01:intron 30.0%
! AGATTATTCTTTTTACTCCC+AGG - Chr3:82557283-82557302 MsG0380016368.01.T01:intron 30.0%
! ATAGTTATGGTTGCTATTCA+CGG - Chr3:82552656-82552675 MsG0380016368.01.T01:intron 30.0%
! CATAGTTTAGTTCGACAAAT+GGG - Chr3:82552260-82552279 MsG0380016368.01.T01:intron 30.0%
! CTATAAGCTATAAGCTCTTT+TGG - Chr3:82549801-82549820 MsG0380016368.01.T01:CDS 30.0%
! GAAGTGTTTGGTAAAATTAG+CGG - Chr3:82549063-82549082 MsG0380016368.01.T01:CDS 30.0%
! GAGAAGTATAAAAGACAATG+AGG + Chr3:82556747-82556766 None:intergenic 30.0%
! TAAACGTACAAGAATGGATT+TGG + Chr3:82553970-82553989 None:intergenic 30.0%
! TAGCTTTTACAAAATCACGA+TGG - Chr3:82553729-82553748 MsG0380016368.01.T01:intron 30.0%
! TCATAGTTTAGTTCGACAAA+TGG - Chr3:82552259-82552278 MsG0380016368.01.T01:intron 30.0%
! TGAGAAAAAGTACAACTCAA+TGG + Chr3:82553385-82553404 None:intergenic 30.0%
! TTATCTAATTACTCCCCTTT+TGG - Chr3:82553352-82553371 MsG0380016368.01.T01:intron 30.0%
! TTTTCACATGCTCATACATT+TGG + Chr3:82557199-82557218 None:intergenic 30.0%
! TTTTTCATCCAATATTGCAC+AGG + Chr3:82556303-82556322 None:intergenic 30.0%
! TTTTTCTTCTTCTATTCTCC+TGG - Chr3:82555435-82555454 MsG0380016368.01.T01:intron 30.0%
!! AACTCGAGAGCATTTATTAA+AGG - Chr3:82551693-82551712 MsG0380016368.01.T01:intron 30.0%
!! AAGGCTTTTAATTAGATCTG+AGG + Chr3:82555209-82555228 None:intergenic 30.0%
!! AGTTTTCCAGAATTTTAGTG+TGG - Chr3:82554802-82554821 MsG0380016368.01.T01:intron 30.0%
!! GATGAATTTGTTATAGGCAA+AGG + Chr3:82552496-82552515 None:intergenic 30.0%
!! GGTTCTTATATGATTTTTGG+TGG - Chr3:82553017-82553036 MsG0380016368.01.T01:intron 30.0%
!! TAGTCACCGTGTTTTTAAAA+TGG - Chr3:82556253-82556272 MsG0380016368.01.T01:CDS 30.0%
!! TTTTTAAAAAGCTGGCGTTA+AGG + Chr3:82556155-82556174 None:intergenic 30.0%
!!! CATTTTTTATCTGTCATCAC+AGG - Chr3:82556401-82556420 MsG0380016368.01.T01:five_prime_UTR 30.0%
!!! GAAACATCAATTTTGGTGTT+TGG - Chr3:82553495-82553514 MsG0380016368.01.T01:intron 30.0%
!!! TCTTATATGATTTTTGGTGG+TGG - Chr3:82553020-82553039 MsG0380016368.01.T01:intron 30.0%
!!! TTACTGTTTCTAGGTTTTCA+TGG + Chr3:82550658-82550677 None:intergenic 30.0%
!!! TTTTTTATGCAACTTGGCTT+AGG - Chr3:82550720-82550739 MsG0380016368.01.T01:intron 30.0%
AAAAAAACGTTATGAGACGG+AGG - Chr3:82549367-82549386 MsG0380016368.01.T01:intron 35.0%
AAACTACATGTGCGTCAATA+AGG + Chr3:82551737-82551756 None:intergenic 35.0%
AAAGCAAGGAACATATAGAG+AGG + Chr3:82549967-82549986 None:intergenic 35.0%
AAATGCTAAGTTCAAGGCAT+AGG + Chr3:82556386-82556405 None:intergenic 35.0%
AACTACATGTGCGTCAATAA+GGG + Chr3:82551736-82551755 None:intergenic 35.0%
AAGAGAGAAAACGACAAATC+AGG + Chr3:82550975-82550994 None:intergenic 35.0%
AAGCAAGGAACATATAGAGA+GGG + Chr3:82549966-82549985 None:intergenic 35.0%
AAGGAAGATCCATGAAAATC+CGG - Chr3:82550323-82550342 MsG0380016368.01.T01:intron 35.0%
AAGGATGAGAGTTATGAAGA+AGG + Chr3:82549939-82549958 None:intergenic 35.0%
AAGTAAAGTAAGGCTCTGTT+TGG - Chr3:82548921-82548940 MsG0380016368.01.T01:CDS 35.0%
AATAGTAGTAGAGTGGATAG+TGG + Chr3:82550541-82550560 None:intergenic 35.0%
ACGCATCAATGATAGTACTA+TGG + Chr3:82551551-82551570 None:intergenic 35.0%
ACGTCGTGATTTAATCAACA+AGG + Chr3:82552125-82552144 None:intergenic 35.0%
ACTATCATTGATGCGTTGTT+TGG - Chr3:82551555-82551574 MsG0380016368.01.T01:intron 35.0%
ACTTCACCACACTAAAATTC+TGG + Chr3:82554811-82554830 None:intergenic 35.0%
AGCTACGTTACATTTCTTGA+GGG - Chr3:82556054-82556073 MsG0380016368.01.T01:CDS 35.0%
AGGCAAATATAGCACTTGAT+AGG + Chr3:82549393-82549412 None:intergenic 35.0%
AGGTCCGCATATCAAATTTA+CGG + Chr3:82553759-82553778 None:intergenic 35.0%
AGTTAACACTTAACATGACC+AGG + Chr3:82555456-82555475 None:intergenic 35.0%
AGTTCGTTTAAGAAAGGAGT+TGG - Chr3:82552227-82552246 MsG0380016368.01.T01:intron 35.0%
ATCAAATCCATTGGATTCAC+AGG - Chr3:82556716-82556735 MsG0380016368.01.T01:intron 35.0%
ATGGTGATATGTCCGAATTA+CGG - Chr3:82553672-82553691 MsG0380016368.01.T01:intron 35.0%
ATTTCCTCAAAAGCTAACTC+CGG + Chr3:82550345-82550364 None:intergenic 35.0%
ATTTGGTCATCATTAACCGT+GGG + Chr3:82557182-82557201 None:intergenic 35.0%
CAATAGAATAAGGGTAGTTG+TGG - Chr3:82554080-82554099 MsG0380016368.01.T01:intron 35.0%
CATAATATATGCAAGGTTCG+GGG + Chr3:82553057-82553076 None:intergenic 35.0%
CCAAACAATCAACTGAACAA+AGG + Chr3:82555228-82555247 None:intergenic 35.0%
CCTTTGTTCAGTTGATTGTT+TGG - Chr3:82555225-82555244 MsG0380016368.01.T01:intron 35.0%
CTCTTTAACCGACAAACAAT+CGG + Chr3:82555393-82555412 None:intergenic 35.0%
CTTCAGCTTTCTTCTACATA+GGG - Chr3:82557312-82557331 MsG0380016368.01.T01:intron 35.0%
CTTTCTTCTACATAGGGATA+AGG - Chr3:82557318-82557337 MsG0380016368.01.T01:intron 35.0%
GAAACAAGGCATGTGAAAAA+GGG - Chr3:82554641-82554660 MsG0380016368.01.T01:intron 35.0%
GAAGGTGAGATAGAAAAAGA+AGG + Chr3:82549921-82549940 None:intergenic 35.0%
GAATGGATATGGACAAAAGA+AGG + Chr3:82552365-82552384 None:intergenic 35.0%
GAGAGAGAGAAAGAGAATTT+AGG + Chr3:82549845-82549864 None:intergenic 35.0%
GCATAATATATGCAAGGTTC+GGG + Chr3:82553058-82553077 None:intergenic 35.0%
GCTCTGTTTGGTAAAAATAG+CGG - Chr3:82548933-82548952 MsG0380016368.01.T01:CDS 35.0%
GGATAAGGAATGAAACACTA+GGG - Chr3:82557333-82557352 MsG0380016368.01.T01:intron 35.0%
GGGGTAAAGGATTAATTGTA+AGG + Chr3:82554246-82554265 None:intergenic 35.0%
GGGTGAAGTCAAATGATAAA+AGG - Chr3:82554881-82554900 MsG0380016368.01.T01:intron 35.0%
TAGAACAAAAATGGGAGAAG+AGG - Chr3:82554586-82554605 MsG0380016368.01.T01:intron 35.0%
TATATGGTTATTTACGGCCA+TGG - Chr3:82553988-82554007 MsG0380016368.01.T01:intron 35.0%
TCACGAATGCATTGCTAATA+AGG + Chr3:82552796-82552815 None:intergenic 35.0%
TCCAGAAGAAATTCATATGC+CGG + Chr3:82554353-82554372 None:intergenic 35.0%
TCGTTTGATAAGAAAGGAGT+TGG - Chr3:82550374-82550393 MsG0380016368.01.T01:intron 35.0%
TGAAACAAGGCATGTGAAAA+AGG - Chr3:82554640-82554659 MsG0380016368.01.T01:intron 35.0%
TGAGCTTAGCTCAATTGTTA+GGG + Chr3:82553086-82553105 None:intergenic 35.0%
TGCTTAGAATTTGGATGAGA+TGG - Chr3:82555972-82555991 MsG0380016368.01.T01:CDS 35.0%
TGTTATAGGCAAAGGATATG+AGG + Chr3:82552488-82552507 None:intergenic 35.0%
TGTTTGGATTCATTGTAGGA+GGG - Chr3:82551571-82551590 MsG0380016368.01.T01:intron 35.0%
TTATAAGCTCAAACGCTACT+TGG - Chr3:82549668-82549687 MsG0380016368.01.T01:CDS 35.0%
TTCATCAACCGTTACAATTC+TGG - Chr3:82550062-82550081 MsG0380016368.01.T01:intron 35.0%
TTCCTCATCGTCGATATATA+GGG + Chr3:82554209-82554228 None:intergenic 35.0%
TTGTTTGGATTCATTGTAGG+AGG - Chr3:82551570-82551589 MsG0380016368.01.T01:intron 35.0%
TTTCCTCATCGTCGATATAT+AGG + Chr3:82554210-82554229 None:intergenic 35.0%
! AAGAGAATTTAGGGTGTGTT+TGG + Chr3:82549835-82549854 None:intergenic 35.0%
! AATCCAATGGATTTGATTCG+CGG + Chr3:82556713-82556732 None:intergenic 35.0%
! AATTAGATCTGAGGTCATGT+CGG + Chr3:82555200-82555219 None:intergenic 35.0%
! AATTTAGGGTGTGTTTGGTA+AGG + Chr3:82549830-82549849 None:intergenic 35.0%
! ACAATGATTTGTAGGGGTAA+AGG + Chr3:82554259-82554278 None:intergenic 35.0%
! ATTATAGAAGTGCAATCACC+TGG + Chr3:82550515-82550534 None:intergenic 35.0%
! CTTTGGAGATTCATTTCAAC+GGG + Chr3:82554716-82554735 None:intergenic 35.0%
! GAAGTGTTCCAGAATTGTAA+CGG + Chr3:82550073-82550092 None:intergenic 35.0%
! GATAAGCTACTTGAAGTGTT+TGG - Chr3:82549051-82549070 MsG0380016368.01.T01:CDS 35.0%
! TAAGCTATAAGCTCTTTTGG+TGG - Chr3:82549804-82549823 MsG0380016368.01.T01:CDS 35.0%
! TACGTGAACGTCTTTAAGAA+TGG + Chr3:82552382-82552401 None:intergenic 35.0%
! TGTAACGTAGCTGCATTTTT+CGG + Chr3:82556046-82556065 None:intergenic 35.0%
! TTAATGGTTTGTAAGGGTGA+AGG - Chr3:82554920-82554939 MsG0380016368.01.T01:intron 35.0%
!! AACGGGTATGTTTGATTTTC+AGG + Chr3:82554699-82554718 None:intergenic 35.0%
!! ATGAACAAGAGATTGGTTTC+TGG + Chr3:82554484-82554503 None:intergenic 35.0%
!! TGGTTAGTTCTATCCCATTT+CGG - Chr3:82555245-82555264 MsG0380016368.01.T01:intron 35.0%
!!! ATATGATTTTTGGTGGTGGT+CGG - Chr3:82553024-82553043 MsG0380016368.01.T01:intron 35.0%
!!! ATTTTTTTAAGAGTTGGGCC+TGG - Chr3:82554137-82554156 MsG0380016368.01.T01:intron 35.0%
!!! GTTTCATGGTTTTGAGAGAA+GGG + Chr3:82553480-82553499 None:intergenic 35.0%
!!! TGTTTCATGGTTTTGAGAGA+AGG + Chr3:82553481-82553500 None:intergenic 35.0%
!!! TTTTTTTAAGAGTTGGGCCT+GGG - Chr3:82554138-82554157 MsG0380016368.01.T01:intron 35.0%
AAGAAAGGAGTTGGATCTGA+TGG - Chr3:82550383-82550402 MsG0380016368.01.T01:intron 40.0%
AAGTAGCATGAGAAGAAAGG+AGG - Chr3:82554051-82554070 MsG0380016368.01.T01:intron 40.0%
AATGATACAAGACGGTGCTT+TGG - Chr3:82556479-82556498 MsG0380016368.01.T01:five_prime_UTR 40.0%
AATTGAGCACACATCTTCCA+TGG + Chr3:82554008-82554027 None:intergenic 40.0%
ACAATTACCTGTTCGAGAGT+TGG + Chr3:82557089-82557108 None:intergenic 40.0%
AGAACAAGTTCTTCCCGAAA+TGG + Chr3:82555262-82555281 None:intergenic 40.0%
AGCAAGGAACATATAGAGAG+GGG + Chr3:82549965-82549984 None:intergenic 40.0%
AGCAAGTAGCATGAGAAGAA+AGG - Chr3:82554048-82554067 MsG0380016368.01.T01:intron 40.0%
AGGAGGTGGCAATAGAATAA+GGG - Chr3:82554071-82554090 MsG0380016368.01.T01:intron 40.0%
AGTGACAGATCTTTCATGTG+AGG - Chr3:82552433-82552452 MsG0380016368.01.T01:intron 40.0%
ATTGCACAGGCAAAATTTGC+AGG + Chr3:82556290-82556309 None:intergenic 40.0%
CAATTACCTGTTCGAGAGTT+GGG + Chr3:82557088-82557107 None:intergenic 40.0%
CAGCTACGTTACATTTCTTG+AGG - Chr3:82556053-82556072 MsG0380016368.01.T01:CDS 40.0%
CATAATATATGCAAGGTCCG+AGG + Chr3:82552728-82552747 None:intergenic 40.0%
CATTTGGTCATCATTAACCG+TGG + Chr3:82557183-82557202 None:intergenic 40.0%
CCTATAGTAGTAAGACAGAC+AGG + Chr3:82552573-82552592 None:intergenic 40.0%
CCTATGTAGAAGAAAGCTGA+AGG + Chr3:82557314-82557333 None:intergenic 40.0%
CCTGTCTGTCTTACTACTAT+AGG - Chr3:82552570-82552589 MsG0380016368.01.T01:intron 40.0%
CCTTCAGCTTTCTTCTACAT+AGG - Chr3:82557311-82557330 MsG0380016368.01.T01:intron 40.0%
CTACTATAGCATGTGCACAA+AGG + Chr3:82549413-82549432 None:intergenic 40.0%
CTAGAAAGAATAGAGCAGGT+TGG - Chr3:82556961-82556980 MsG0380016368.01.T01:intron 40.0%
GAACAAGTTCTTCCCGAAAT+GGG + Chr3:82555261-82555280 None:intergenic 40.0%
GAATAAAACACGGTCGTAAG+CGG + Chr3:82550127-82550146 None:intergenic 40.0%
GACAAATAGTTAGTTGGGGA+AGG + Chr3:82556814-82556833 None:intergenic 40.0%
GACCGATGATGCTTAGAATT+TGG - Chr3:82555963-82555982 MsG0380016368.01.T01:CDS 40.0%
GACGAGTCGTTTGATAAGAA+AGG - Chr3:82550368-82550387 MsG0380016368.01.T01:intron 40.0%
GCAAAGCGAATGATACAAGA+CGG - Chr3:82556471-82556490 MsG0380016368.01.T01:five_prime_UTR 40.0%
GCAAGACCACAAAAGAATAC+AGG + Chr3:82556784-82556803 None:intergenic 40.0%
GCGTTGTTTGGATTCATTGT+AGG - Chr3:82551567-82551586 MsG0380016368.01.T01:intron 40.0%
GCTATAAGCTCATGGTGAAA+AGG - Chr3:82549730-82549749 MsG0380016368.01.T01:CDS 40.0%
GCTGGGTCAAAAGAATTTCA+GGG - Chr3:82557235-82557254 MsG0380016368.01.T01:intron 40.0%
GGGATAAGGAATGAAACACT+AGG - Chr3:82557332-82557351 MsG0380016368.01.T01:intron 40.0%
GTAAATTTGATATGCGGACC+TGG - Chr3:82553758-82553777 MsG0380016368.01.T01:intron 40.0%
GTGAGCTTAGCTCAATTGTT+AGG + Chr3:82553087-82553106 None:intergenic 40.0%
TAAGGGGGATTACCGTAATT+CGG + Chr3:82553687-82553706 None:intergenic 40.0%
TAATCTTCAGCACCCATCAT+AGG + Chr3:82557269-82557288 None:intergenic 40.0%
TACTATAGGACAAACGGCAA+AGG - Chr3:82552584-82552603 MsG0380016368.01.T01:intron 40.0%
TCATATGCCGGAAATGTGTA+GGG + Chr3:82554341-82554360 None:intergenic 40.0%
TCCGATCGGAGAATAAAACA+CGG + Chr3:82550137-82550156 None:intergenic 40.0%
TCCGGCATATGAATTTCTTC+TGG - Chr3:82554349-82554368 MsG0380016368.01.T01:intron 40.0%
TCCTCATCGTCGATATATAG+GGG + Chr3:82554208-82554227 None:intergenic 40.0%
TGCTGGGTCAAAAGAATTTC+AGG - Chr3:82557234-82557253 MsG0380016368.01.T01:intron 40.0%
TGTGTGTTTGGTATCATCGA+CGG + Chr3:82554976-82554995 None:intergenic 40.0%
TTCATATGCCGGAAATGTGT+AGG + Chr3:82554342-82554361 None:intergenic 40.0%
TTCTAGCAGCTGGTAAAAAC+TGG + Chr3:82556947-82556966 None:intergenic 40.0%
TTGGCAAGCTATATAGTCCA+AGG + Chr3:82551805-82551824 None:intergenic 40.0%
! AAGCTAACTCCGGATTTTCA+TGG + Chr3:82550335-82550354 None:intergenic 40.0%
! AAGGGTGAAGGTAAAAGTGT+AGG - Chr3:82554932-82554951 MsG0380016368.01.T01:intron 40.0%
! AATGGTGGAAAACACGACAA+TGG - Chr3:82555802-82555821 MsG0380016368.01.T01:intron 40.0%
! AGCTCTTTGCTGTGATTCTA+TGG - Chr3:82551405-82551424 MsG0380016368.01.T01:intron 40.0%
! AGGGTGAAGGTAAAAGTGTA+GGG - Chr3:82554933-82554952 MsG0380016368.01.T01:intron 40.0%
! AGTTTGGAACGAAGCATGTT+CGG - Chr3:82550242-82550261 MsG0380016368.01.T01:intron 40.0%
! ATCCAATGGATTTGATTCGC+GGG + Chr3:82556712-82556731 None:intergenic 40.0%
! GAGTACAAGTCTAAAGTTGC+CGG - Chr3:82551604-82551623 MsG0380016368.01.T01:intron 40.0%
! GCTGATCCTGTATTCTTTTG+TGG - Chr3:82556775-82556794 MsG0380016368.01.T01:intron 40.0%
! GGAAGAAAGTACAGAAAGCA+AGG + Chr3:82549981-82550000 None:intergenic 40.0%
! GGATTAATTGTAAGGGTGCA+TGG + Chr3:82554238-82554257 None:intergenic 40.0%
! GGTAAAAGTGTAGGGATACA+AGG - Chr3:82554941-82554960 MsG0380016368.01.T01:intron 40.0%
! GTAACGTAGCTGCATTTTTC+GGG + Chr3:82556045-82556064 None:intergenic 40.0%
! TAACTCTGCTGATCCTGTTT+TGG - Chr3:82556647-82556666 MsG0380016368.01.T01:intron 40.0%
! TCAGCTCTAACAGCAACAAA+GGG + Chr3:82550474-82550493 None:intergenic 40.0%
! TCATCACTTAACAGTGGGTT+AGG - Chr3:82552511-82552530 MsG0380016368.01.T01:intron 40.0%
! TCTAATTACTCCCCTTTTGG+AGG - Chr3:82553355-82553374 MsG0380016368.01.T01:intron 40.0%
! TTTTAGTGTGGTGAAGTCGA+TGG - Chr3:82554814-82554833 MsG0380016368.01.T01:intron 40.0%
! TTTTCAGAGCCGTGATTAGT+GGG - Chr3:82556598-82556617 MsG0380016368.01.T01:intron 40.0%
!! AAAAGTGTCCATCGATTTGC+TGG - Chr3:82557217-82557236 MsG0380016368.01.T01:intron 40.0%
!! AAAGTGTCCATCGATTTGCT+GGG - Chr3:82557218-82557237 MsG0380016368.01.T01:intron 40.0%
!! ACCGTGTTTTATTCTCCGAT+CGG - Chr3:82550133-82550152 MsG0380016368.01.T01:intron 40.0%
!! AGTGGTTGAAAAGTGTTCGA+AGG - Chr3:82550304-82550323 MsG0380016368.01.T01:intron 40.0%
!! CTCTCGAGTTTTCAAGATCT+TGG + Chr3:82551683-82551702 None:intergenic 40.0%
!! GGGTATGTTTGATTTTCAGG+TGG + Chr3:82554696-82554715 None:intergenic 40.0%
!! GGTTAGTTCTATCCCATTTC+GGG - Chr3:82555246-82555265 MsG0380016368.01.T01:intron 40.0%
!! TACAATTCTGGAACACTTCG+CGG - Chr3:82550074-82550093 MsG0380016368.01.T01:intron 40.0%
!! TTTTTCAGAGCCGTGATTAG+TGG - Chr3:82556597-82556616 MsG0380016368.01.T01:intron 40.0%
!!! AAATCCGGAGTTAGCTTTTG+AGG - Chr3:82550338-82550357 MsG0380016368.01.T01:intron 40.0%
!!! TATGATTTTTGGTGGTGGTC+GGG - Chr3:82553025-82553044 MsG0380016368.01.T01:intron 40.0%
AAAATCCACATCCAGCCAAC+AGG + Chr3:82556581-82556600 None:intergenic 45.0%
AAATCCACATCCAGCCAACA+GGG + Chr3:82556580-82556599 None:intergenic 45.0%
AACATATAGAGAGGGGGGTA+AGG + Chr3:82549958-82549977 None:intergenic 45.0%
AAGGAGAATTCGAACACGTG+CGG + Chr3:82549895-82549914 None:intergenic 45.0%
AATTGCCACATGGTCTAACG+AGG + Chr3:82553556-82553575 None:intergenic 45.0%
ACCTGGACTCTCAATATCAC+TGG - Chr3:82553775-82553794 MsG0380016368.01.T01:intron 45.0%
ACTTCACCCCTACACATTTC+CGG - Chr3:82554331-82554350 MsG0380016368.01.T01:intron 45.0%
AGAAAGCTGAAGGAATGACC+TGG + Chr3:82557304-82557323 None:intergenic 45.0%
AGCACCCGACTGGTATAATT+GGG - Chr3:82556541-82556560 MsG0380016368.01.T01:intron 45.0%
AGCGATTGAATCTCGTGCAT+GGG + Chr3:82555367-82555386 None:intergenic 45.0%
AGCTGCAGTTATCAGCATAC+AGG - Chr3:82556677-82556696 MsG0380016368.01.T01:intron 45.0%
ATACCAGACTCAGTGGTCAT+TGG - Chr3:82556895-82556914 MsG0380016368.01.T01:intron 45.0%
ATTGCCACATGGTCTAACGA+GGG + Chr3:82553555-82553574 None:intergenic 45.0%
CAAGGAACATATAGAGAGGG+GGG + Chr3:82549963-82549982 None:intergenic 45.0%
CATATGCCGGAAATGTGTAG+GGG + Chr3:82554340-82554359 None:intergenic 45.0%
CCTGGACTCTCAATATCACT+GGG - Chr3:82553776-82553795 MsG0380016368.01.T01:intron 45.0%
CGAACAGGTAATTGTGCAAC+AGG - Chr3:82557094-82557113 MsG0380016368.01.T01:intron 45.0%
CTCGACCCAATTATACCAGT+CGG + Chr3:82556549-82556568 None:intergenic 45.0%
CTGGACTCTCAATATCACTG+GGG - Chr3:82553777-82553796 MsG0380016368.01.T01:intron 45.0%
GAAAGCTGAAGGAATGACCT+GGG + Chr3:82557303-82557322 None:intergenic 45.0%
GAGGAGGTGGCAATAGAATA+AGG - Chr3:82554070-82554089 MsG0380016368.01.T01:intron 45.0%
GATACGACACAATTGCCACA+TGG + Chr3:82553566-82553585 None:intergenic 45.0%
GATGAAGATGCTCTACCGAT+AGG - Chr3:82557392-82557411 MsG0380016368.01.T01:intron 45.0%
GCAAGGAACATATAGAGAGG+GGG + Chr3:82549964-82549983 None:intergenic 45.0%
GCTGCAGTTATCAGCATACA+GGG - Chr3:82556678-82556697 MsG0380016368.01.T01:intron 45.0%
GCTGCTAGAAAGAATAGAGC+AGG - Chr3:82556957-82556976 MsG0380016368.01.T01:intron 45.0%
GGCAATACCTGTGAATCCAA+TGG + Chr3:82556726-82556745 None:intergenic 45.0%
GGTGTTAGAAAACGCTCTGA+AGG + Chr3:82556926-82556945 None:intergenic 45.0%
GTACACTATTTACCCTCCCA+CGG - Chr3:82557163-82557182 MsG0380016368.01.T01:intron 45.0%
GTGTGTTTGGTATCATCGAC+GGG + Chr3:82554975-82554994 None:intergenic 45.0%
TAGCATGAGAAGAAAGGAGG+AGG - Chr3:82554054-82554073 MsG0380016368.01.T01:intron 45.0%
TATTGTCCCAACTCTCGAAC+AGG - Chr3:82557079-82557098 MsG0380016368.01.T01:intron 45.0%
TCAATGGCTCTCCTCCAAAA+GGG + Chr3:82553369-82553388 None:intergenic 45.0%
TCATCGTCGATATATAGGGG+CGG + Chr3:82554205-82554224 None:intergenic 45.0%
TCGACCCAATTATACCAGTC+GGG + Chr3:82556548-82556567 None:intergenic 45.0%
TCGAGAGTTGGGACAATAGT+AGG + Chr3:82557077-82557096 None:intergenic 45.0%
TGACATGATACCAGACTCAG+TGG - Chr3:82556888-82556907 MsG0380016368.01.T01:intron 45.0%
TGTGCGTCAATAAGGGATGA+AGG + Chr3:82551729-82551748 None:intergenic 45.0%
TTGAGCTAAGCTCACGATGA+CGG - Chr3:82553092-82553111 MsG0380016368.01.T01:intron 45.0%
TTTATCGCAGCATCTCCGAT+CGG + Chr3:82550151-82550170 None:intergenic 45.0%
! AATAGAGCAGGTTGGCAACT+TGG - Chr3:82556969-82556988 MsG0380016368.01.T01:intron 45.0%
! AGAAGTGCAATCACCTGGAT+GGG + Chr3:82550510-82550529 None:intergenic 45.0%
! ATTGAGGTACCTCTCTGCAA+TGG + Chr3:82557435-82557454 None:intergenic 45.0%
! CTTTTGACCCAGCAAATCGA+TGG + Chr3:82557228-82557247 None:intergenic 45.0%
! GCTCTATTCTTTCTAGCAGC+TGG + Chr3:82556957-82556976 None:intergenic 45.0%
! GGCTCTTTTCCCACTAATCA+CGG + Chr3:82556610-82556629 None:intergenic 45.0%
! GTCAGCTCTAACAGCAACAA+AGG + Chr3:82550475-82550494 None:intergenic 45.0%
! TAGAAGTGCAATCACCTGGA+TGG + Chr3:82550511-82550530 None:intergenic 45.0%
! TCGCTCTACCGATTGTTTGT+CGG - Chr3:82555382-82555401 MsG0380016368.01.T01:intron 45.0%
! TGAGCTTAGCTCAGTTGGTA+TGG + Chr3:82552757-82552776 None:intergenic 45.0%
! TGTTGCTGTTAGAGCTGACA+TGG - Chr3:82550476-82550495 MsG0380016368.01.T01:intron 45.0%
! TTCCGTGTCACGTTTTTGCA+CGG + Chr3:82550198-82550217 None:intergenic 45.0%
!! ATTGTAGGAGGGTGTTGAGT+GGG - Chr3:82551582-82551601 MsG0380016368.01.T01:intron 45.0%
!! CATAGGTTGTAGCCTTGTAG+GGG + Chr3:82556369-82556388 None:intergenic 45.0%
!! CTTCTCATGCTACTTGCTGT+TGG + Chr3:82554046-82554065 None:intergenic 45.0%
!! GAGAGGTACCTCAATGAACA+TGG - Chr3:82557440-82557459 MsG0380016368.01.T01:intron 45.0%
!! GCATAGGTTGTAGCCTTGTA+GGG + Chr3:82556370-82556389 None:intergenic 45.0%
!! ATTATAAATTAAAATACATA+TGG + Chr3:82549566-82549585 None:intergenic 5.0%
!!! AAAACTTTTAATAAAAAAAA+AGG + Chr3:82550848-82550867 None:intergenic 5.0%
!!! AAATTTTATAGTTTATAAAT+TGG + Chr3:82554413-82554432 None:intergenic 5.0%
!!! TTTATTTTTTTTTTTTTGAA+AGG - Chr3:82550581-82550600 MsG0380016368.01.T01:intron 5.0%
AATCCACATCCAGCCAACAG+GGG + Chr3:82556579-82556598 None:intergenic 50.0%
ACACTAGGGTCTACTCACAC+AGG - Chr3:82557347-82557366 MsG0380016368.01.T01:intron 50.0%
ACAGGATCAGCAGAGTTACG+AGG + Chr3:82556645-82556664 None:intergenic 50.0%
AGCAGAGTTACGAGGGTTTG+CGG + Chr3:82556637-82556656 None:intergenic 50.0%
AGGGTAGTCCCTCCTATGAT+GGG - Chr3:82557254-82557273 MsG0380016368.01.T01:intron 50.0%
AGTGACTGGGGTTTGAACCT+CGG - Chr3:82552708-82552727 MsG0380016368.01.T01:intron 50.0%
CAATGGCTCTCCTCCAAAAG+GGG + Chr3:82553368-82553387 None:intergenic 50.0%
CACCGTGCAAAAACGTGACA+CGG - Chr3:82550193-82550212 MsG0380016368.01.T01:intron 50.0%
CAGACTCAGTGGTCATTGGT+GGG - Chr3:82556899-82556918 MsG0380016368.01.T01:intron 50.0%
CAGGATCAGCAGAGTTACGA+GGG + Chr3:82556644-82556663 None:intergenic 50.0%
CATGAGAAGAAAGGAGGAGG+TGG - Chr3:82554057-82554076 MsG0380016368.01.T01:intron 50.0%
CCAACTGAGCTAAGCTCATG+AGG - Chr3:82552759-82552778 MsG0380016368.01.T01:intron 50.0%
CCAGCAGAAGAAGCTGGTAA+TGG - Chr3:82556447-82556466 MsG0380016368.01.T01:five_prime_UTR 50.0%
CCATTACCAGCTTCTTCTGC+TGG + Chr3:82556450-82556469 None:intergenic 50.0%
CCCAGTGATATTGAGAGTCC+AGG + Chr3:82553779-82553798 None:intergenic 50.0%
CCTCATGAGCTTAGCTCAGT+TGG + Chr3:82552762-82552781 None:intergenic 50.0%
CGGTGACAAACTGCGAAGTT+TGG - Chr3:82550226-82550245 MsG0380016368.01.T01:intron 50.0%
CTCAATGGCTCTCCTCCAAA+AGG + Chr3:82553370-82553389 None:intergenic 50.0%
CTCCCGCGAATCAAATCCAT+TGG - Chr3:82556707-82556726 MsG0380016368.01.T01:intron 50.0%
CTTCAGCACCCATCATAGGA+GGG + Chr3:82557265-82557284 None:intergenic 50.0%
GAACGAAGCATGTTCGGAAG+CGG - Chr3:82550248-82550267 MsG0380016368.01.T01:intron 50.0%
GAGCACCCGACTGGTATAAT+TGG - Chr3:82556540-82556559 MsG0380016368.01.T01:intron 50.0%
GAGCGATTGAATCTCGTGCA+TGG + Chr3:82555368-82555387 None:intergenic 50.0%
GATACAAGACGGTGCTTTGG+AGG - Chr3:82556482-82556501 MsG0380016368.01.T01:five_prime_UTR 50.0%
GCACATGTGGCGATGCTTAT+TGG - Chr3:82551652-82551671 MsG0380016368.01.T01:intron 50.0%
GCATGAACAGCAGCTCCTAT+CGG + Chr3:82557410-82557429 None:intergenic 50.0%
GCCCCTATATATCGACGATG+AGG - Chr3:82554204-82554223 MsG0380016368.01.T01:intron 50.0%
GCTCTAACAGCAACAAAGGG+CGG + Chr3:82550471-82550490 None:intergenic 50.0%
GGTATAATTGGGTCGAGACC+TGG - Chr3:82556552-82556571 MsG0380016368.01.T01:intron 50.0%
GGTCATCATTAACCGTGGGA+GGG + Chr3:82557178-82557197 None:intergenic 50.0%
GTGCAAAAACGTGACACGGA+AGG - Chr3:82550197-82550216 MsG0380016368.01.T01:intron 50.0%
GTTAAGCGTAGCACAGTTGC+CGG - Chr3:82550272-82550291 MsG0380016368.01.T01:intron 50.0%
TAAAACACGGTCGTAAGCGG+CGG + Chr3:82550124-82550143 None:intergenic 50.0%
TATACCAGTCGGGTGCTCAT+GGG + Chr3:82556538-82556557 None:intergenic 50.0%
TCGATATATAGGGGCGGATC+TGG + Chr3:82554199-82554218 None:intergenic 50.0%
TCTTCAGCACCCATCATAGG+AGG + Chr3:82557266-82557285 None:intergenic 50.0%
TGGTCATCATTAACCGTGGG+AGG + Chr3:82557179-82557198 None:intergenic 50.0%
TTATACCAGTCGGGTGCTCA+TGG + Chr3:82556539-82556558 None:intergenic 50.0%
TTCATGCCACCATTGCAGAG+AGG - Chr3:82557423-82557442 MsG0380016368.01.T01:intron 50.0%
TTGCCACATGGTCTAACGAG+GGG + Chr3:82553554-82553573 None:intergenic 50.0%
!! CATTGTAGGAGGGTGTTGAG+TGG - Chr3:82551581-82551600 MsG0380016368.01.T01:intron 50.0%
!! GGCATAGGTTGTAGCCTTGT+AGG + Chr3:82556371-82556390 None:intergenic 50.0%
!! GTTGTAGCCTTGTAGGGGAT+CGG + Chr3:82556364-82556383 None:intergenic 50.0%
!!! AGCGGCGGAAGGTATTTTCA+CGG + Chr3:82550109-82550128 None:intergenic 50.0%
CAGGGTAGTCCCTCCTATGA+TGG - Chr3:82557253-82557272 MsG0380016368.01.T01:intron 55.0%
CATGGATGCACTTCCCATCC+AGG - Chr3:82550494-82550513 MsG0380016368.01.T01:intron 55.0%
CCACCAATGACCACTGAGTC+TGG + Chr3:82556901-82556920 None:intergenic 55.0%
CCAGACTCAGTGGTCATTGG+TGG - Chr3:82556898-82556917 MsG0380016368.01.T01:intron 55.0%
CCGGCAAAATGCACGCTTGT+GGG - Chr3:82551623-82551642 MsG0380016368.01.T01:intron 55.0%
CGTGACACGGAAGGCTAAGA+CGG - Chr3:82550206-82550225 MsG0380016368.01.T01:intron 55.0%
GAACCCCTCGTTAGACCATG+TGG - Chr3:82553548-82553567 MsG0380016368.01.T01:intron 55.0%
GCAGCTGAAGCTGCCAAAAC+AGG + Chr3:82556663-82556682 None:intergenic 55.0%
TACCAGCTTCTTCTGCTGGC+TGG + Chr3:82556446-82556465 None:intergenic 55.0%
TATTCGCGCCTGGATCGGTA+CGG - Chr3:82550440-82550459 MsG0380016368.01.T01:intron 55.0%
TTCAACCACTCCACCGTCTC+CGG + Chr3:82550294-82550313 None:intergenic 55.0%
TTCACAGCCGATCCCCTACA+AGG - Chr3:82556354-82556373 MsG0380016368.01.T01:exon 55.0%
TTCCAGCCAGCAGAAGAAGC+TGG - Chr3:82556441-82556460 MsG0380016368.01.T01:five_prime_UTR 55.0%
TTTAAGAGTTGGGCCTGGGC+TGG - Chr3:82554142-82554161 MsG0380016368.01.T01:intron 55.0%
! CCCACAAGCGTGCATTTTGC+CGG + Chr3:82551626-82551645 None:intergenic 55.0%
! GAGGTACCTCTCTGCAATGG+TGG + Chr3:82557432-82557451 None:intergenic 55.0%
!! AGACGGTGCTTTGGAGGATG+TGG - Chr3:82556488-82556507 MsG0380016368.01.T01:five_prime_UTR 55.0%
!!! CGAATACCGGTTTTCGCGAG+CGG + Chr3:82550426-82550445 None:intergenic 55.0%
!!! GAATACCGGTTTTCGCGAGC+GGG + Chr3:82550425-82550444 None:intergenic 55.0%
!!! GGCGGAAGGTATTTTCACGG+CGG + Chr3:82550106-82550125 None:intergenic 55.0%
ACCGATCCAGGCGCGAATAC+CGG + Chr3:82550439-82550458 None:intergenic 60.0%
ACCGGTATTCGCGCCTGGAT+CGG - Chr3:82550435-82550454 MsG0380016368.01.T01:intron 60.0%
ATTCGCGCCTGGATCGGTAC+GGG - Chr3:82550441-82550460 MsG0380016368.01.T01:intron 60.0%
CGAAAACCGGTATTCGCGCC+TGG - Chr3:82550430-82550449 MsG0380016368.01.T01:intron 60.0%
CGTAGCACAGTTGCCGGAGA+CGG - Chr3:82550278-82550297 MsG0380016368.01.T01:intron 60.0%
CGTTACCCGCTCGCGAAAAC+CGG - Chr3:82550417-82550436 MsG0380016368.01.T01:intron 60.0%
GCCGGCAAAATGCACGCTTG+TGG - Chr3:82551622-82551641 MsG0380016368.01.T01:intron 60.0%
GGTGTGGCACTTGCCACACT+GGG - Chr3:82554167-82554186 MsG0380016368.01.T01:intron 60.0%
GTATCCCATGAGCACCCGAC+TGG - Chr3:82556531-82556550 MsG0380016368.01.T01:intron 60.0%
GTTACGAGGGTTTGCGGCAG+AGG + Chr3:82556631-82556650 None:intergenic 60.0%
TATAGGGGCGGATCTGGCCA+AGG + Chr3:82554193-82554212 None:intergenic 60.0%
TGGTGTGGCACTTGCCACAC+TGG - Chr3:82554166-82554185 MsG0380016368.01.T01:intron 60.0%
TTGTGGGCACGACGCACATG+TGG - Chr3:82551639-82551658 MsG0380016368.01.T01:intron 60.0%
!! CGGTGCTTTGGAGGATGTGG+AGG - Chr3:82556491-82556510 MsG0380016368.01.T01:five_prime_UTR 60.0%
ACACGGTCGTAAGCGGCGGA+AGG + Chr3:82550120-82550139 None:intergenic 65.0%
AGACCTGGACCCCTGTTGGC+TGG - Chr3:82556567-82556586 MsG0380016368.01.T01:intron 65.0%
AGCACAGTTGCCGGAGACGG+TGG - Chr3:82550281-82550300 MsG0380016368.01.T01:intron 65.0%
AGTTGCCGGAGACGGTGGAG+TGG - Chr3:82550286-82550305 MsG0380016368.01.T01:intron 65.0%
CATCCAGCCAACAGGGGTCC+AGG + Chr3:82556573-82556592 None:intergenic 65.0%
GATCTGGCCAAGGCCCAGTG+TGG + Chr3:82554183-82554202 None:intergenic 65.0%
GCACTTGCCACACTGGGCCT+TGG - Chr3:82554173-82554192 MsG0380016368.01.T01:intron 65.0%
GTCGAGACCTGGACCCCTGT+TGG - Chr3:82556563-82556582 MsG0380016368.01.T01:intron 65.0%
! GGACCCCTGTTGGCTGGATG+TGG - Chr3:82556573-82556592 MsG0380016368.01.T01:intron 65.0%
AGTGCCACACCAGCCAGCCC+AGG + Chr3:82554158-82554177 None:intergenic 70.0%
! CGGTCCACCCGTACCGATCC+AGG + Chr3:82550451-82550470 None:intergenic 70.0%
!! AGAGTTGGGCCTGGGCTGGC+TGG - Chr3:82554146-82554165 MsG0380016368.01.T01:intron 70.0%
CGCGCCTGGATCGGTACGGG+TGG - Chr3:82550444-82550463 MsG0380016368.01.T01:intron 75.0%
!! TGGGCCTGGGCTGGCTGGTG+TGG - Chr3:82554151-82554170 MsG0380016368.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr3 gene 82548916 82557466 82548916 ID=MsG0380016368.01;Name=MsG0380016368.01
Chr3 mRNA 82548916 82557466 82548916 ID=MsG0380016368.01.T01;Parent=MsG0380016368.01;Name=MsG0380016368.01.T01;_AED=0.41;_eAED=0.41;_QI=190|0.8|0.83|1|0.8|0.66|6|0|495
Chr3 exon 82548916 82549338 82548916 ID=MsG0380016368.01.T01:exon:10912;Parent=MsG0380016368.01.T01
Chr3 exon 82549404 82549532 82549404 ID=MsG0380016368.01.T01:exon:10911;Parent=MsG0380016368.01.T01
Chr3 exon 82549645 82549959 82549645 ID=MsG0380016368.01.T01:exon:10910;Parent=MsG0380016368.01.T01
Chr3 exon 82554668 82554793 82554668 ID=MsG0380016368.01.T01:exon:10909;Parent=MsG0380016368.01.T01
Chr3 exon 82555867 82556535 82555867 ID=MsG0380016368.01.T01:exon:10908;Parent=MsG0380016368.01.T01
Chr3 exon 82557451 82557466 82557451 ID=MsG0380016368.01.T01:exon:10907;Parent=MsG0380016368.01.T01
Chr3 five_prime_UTR 82557451 82557466 82557451 ID=MsG0380016368.01.T01:five_prime_utr;Parent=MsG0380016368.01.T01
Chr3 five_prime_UTR 82556362 82556535 82556362 ID=MsG0380016368.01.T01:five_prime_utr;Parent=MsG0380016368.01.T01
Chr3 CDS 82555867 82556361 82555867 ID=MsG0380016368.01.T01:cds;Parent=MsG0380016368.01.T01
Chr3 CDS 82554668 82554793 82554668 ID=MsG0380016368.01.T01:cds;Parent=MsG0380016368.01.T01
Chr3 CDS 82549645 82549959 82549645 ID=MsG0380016368.01.T01:cds;Parent=MsG0380016368.01.T01
Chr3 CDS 82549404 82549532 82549404 ID=MsG0380016368.01.T01:cds;Parent=MsG0380016368.01.T01
Chr3 CDS 82548916 82549338 82548916 ID=MsG0380016368.01.T01:cds;Parent=MsG0380016368.01.T01
Gene Sequence

>MsG0380016368.01.T01

ATGAAATTCCGAAACTCTTTGTTTTACTTTTTGATCATATTTTCATCAACCGTTACAATTCTGGAACACTTCGCGGTTTCAACCGCCGTGAAAATACCTTCCGCCGCTTACGACCGTGTTTTATTCTCCGATCGGAGATGCTGCGATAAAGAGAACAACGAGTTAACTCTGTCACCGTGCAAAAACGTGACACGGAAGGCTAAGACGGTGACAAACTGCGAAGTTTGGAACGAAGCATGTTCGGAAGCGGTGTTAAGCGTAGCACAGTTGCCGGAGACGGTGGAGTGGTTGAAAAGTGTTCGAAGGAAGATCCATGAAAATCCGGAGTTAGCTTTTGAGGAAATCGAGACGAGTCGTTTGATAAGAAAGGAGTTGGATCTGATGGAAGTTAGTTATCGTTACCCGCTCGCGAAAACCGGTATTCGCGCCTGGATCGGTACGGGTGGACCGCCCTTTGTTGCTGTTAGAGCTGACATGGATGCACTTCCCATCCAGGAGGGTGTTGAGTGGGAGTACAAGTCTAAAGTTGCCGGCAAAATGCACGCTTGTGGGCACGACGCACATGTGGCGATGCTTATTGGAGCTGCCAAGATCTTGAAAACTCGAGAGCATTTATTAAAGGGTACTGTAATTCTGTTATTCCAGCCAGCAGAAGAAGCTGGTAATGGTGCAAAGCGAATGATACAAGACGGTGCTTTGGAGGATGTGGAGGCTATATTTGCAGTTCATGTATCCCATGAGCACCCGACTGGTATAATTGGGTCGAGACCTGGACCCCTGTTGGCTGGATGTGGATTTTTCAGAGCCGTGATTAGTGGGAAAAGAGCCTCTGCCGCAAACCCTCGTAACTCTGCTGATCCTGTTTTGGCAGCTTCAGCTGCAGTTATCAGCATACAGGGCATTGTCTCCCGCGAATCAAATCCATTGGATTCACAGGTTGTGTCTGTAACTTCATTTAATGGAGGCAATAGTCATGACATGATACCAGACTCAGTGGTCATTGGTGGGACCTTCAGAGCGTTTTCTAACACCAGTTTTTACCAGCTGCTAGAAAGAATAGAGCAGTGCAAATGGCTGAATGAGCTTAATTTTAATCCTACTATTGTCCCAACTCTCGAACAGGTAATTGTGCAACAGGCTAGTGTTTACAGTTGCTTTGCAGAAGTTGACTTCTTTGAAAAGGAGTACACTATTTACCCTCCCACGGTTAATGATGACCAAATGTATGAGCATGTGAAAAAAGTGTCCATCGATTTGCTGGGTCAAAAGAATTTCAGGGTAGTCCCTCCTATGATGGGTGCTGAAGATTATTCTTTTTACTCCCAGGTCATTCCTTCAGCTTTCTTCTACATAGGGATAAGGAATGAAACACTAGGGTCTACTCACACAGGACACTCTCCACATTTCATGATTGATGAAGATGCTCTACCGATAGGAGCTGCTGTTCATGCCACCATTGCAGAGAGGTACCTCAATGAACATGGTTGA
Protein sequence

>MsG0380016368.01.T01

MKFRNSLFYFLIIFSSTVTILEHFAVSTAVKIPSAAYDRVLFSDRRCCDKENNELTLSPCKNVTRKAKTVTNCEVWNEACSEAVLSVAQLPETVEWLKSVRRKIHENPELAFEEIETSRLIRKELDLMEVSYRYPLAKTGIRAWIGTGGPPFVAVRADMDALPIQEGVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKTREHLLKGTVILLFQPAEEAGNGAKRMIQDGALEDVEAIFAVHVSHEHPTGIIGSRPGPLLAGCGFFRAVISGKRASAANPRNSADPVLAASAAVISIQGIVSRESNPLDSQVVSVTSFNGGNSHDMIPDSVVIGGTFRAFSNTSFYQLLERIEQCKWLNELNFNPTIVPTLEQVIVQQASVYSCFAEVDFFEKEYTIYPPTVNDDQMYEHVKKVSIDLLGQKNFRVVPPMMGAEDYSFYSQVIPSAFFYIGIRNETLGSTHTGHSPHFMIDEDALPIGAAVHATIAERYLNEHG*