AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042512.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042512.01.T01 MTR_8g015510 95.718 397 17 0 1 397 51 447 0.0 765
MsG0880042512.01.T01 MTR_8g015510 96.636 327 11 0 71 397 1 327 0.0 650
MsG0880042512.01.T01 MTR_2g097530 72.796 397 105 3 1 397 54 447 0.0 598
MsG0880042512.01.T01 MTR_2g097540 72.796 397 105 3 1 397 50 443 0.0 598
MsG0880042512.01.T01 MTR_2g100510 73.804 397 101 3 1 397 54 447 0.0 598
MsG0880042512.01.T01 MTR_2g100560 71.788 397 109 3 1 397 59 452 0.0 590
MsG0880042512.01.T01 MTR_2g100520 71.788 397 109 3 1 397 54 447 0.0 586
MsG0880042512.01.T01 MTR_3g088590 56.992 379 161 2 3 381 99 475 1.05e-157 452
MsG0880042512.01.T01 MTR_8g062790 57.825 377 155 3 1 377 52 424 2.85e-150 432
MsG0880042512.01.T01 MTR_3g093030 51.969 381 181 2 1 381 40 418 5.77e-141 408
MsG0880042512.01.T01 MTR_8g075310 55.200 375 147 5 1 374 59 413 5.14e-138 401
MsG0880042512.01.T01 MTR_8g063060 43.949 314 142 10 69 379 58 340 8.39e-72 229
MsG0880042512.01.T01 MTR_2g100550 82.456 114 20 0 1 114 50 163 2.31e-61 208
MsG0880042512.01.T01 MTR_1g028070 72.807 114 31 0 102 215 14 127 7.59e-50 164
MsG0880042512.01.T01 MTR_3g077040 55.970 134 35 2 84 217 1 110 3.16e-35 125
MsG0880042512.01.T01 MTR_3g093040 43.434 99 46 1 84 172 1 99 2.70e-18 85.1
MsG0880042512.01.T01 MTR_1205s0010 29.167 168 113 2 199 366 2 163 3.27e-16 76.3
MsG0880042512.01.T01 MTR_2g100530 51.471 68 27 3 334 397 4 69 1.18e-12 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042512.01.T01 AT1G51760 69.521 397 117 3 1 397 48 440 0.0 575
MsG0880042512.01.T01 AT1G51780 67.018 379 123 2 1 379 48 424 0.0 529
MsG0880042512.01.T01 AT5G56660 61.209 397 146 4 1 397 51 439 7.67e-175 495
MsG0880042512.01.T01 AT5G56650 61.153 399 143 7 1 397 50 438 1.00e-172 489
MsG0880042512.01.T01 AT1G44350 53.333 375 168 3 4 378 92 459 3.29e-134 392
MsG0880042512.01.T01 AT5G56650 68.966 261 79 1 1 261 50 308 1.49e-132 382
MsG0880042512.01.T01 AT3G02875 51.175 383 181 5 1 381 52 430 2.47e-129 379
MsG0880042512.01.T01 AT5G54140 47.815 389 200 3 1 388 41 427 1.59e-128 377
MsG0880042512.01.T01 AT3G02875 54.231 260 119 0 1 260 52 311 7.89e-99 298
MsG0880042512.01.T01 AT3G02875 54.018 224 103 0 1 224 52 275 5.13e-84 259

Find 104 sgRNAs with CRISPR-Local

Find 317 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGTGTCATGACACCATTTA+TGG 0.164724 8:-9874193 MsG0880042512.01.T01:CDS
CGCACCGGAAGCTGCTAATA+TGG 0.208424 8:+9875548 None:intergenic
TTTACAGTTGGAGGATAAAA+AGG 0.228613 8:+9874282 None:intergenic
GAAAATGTCACTGCTATCTT+TGG 0.241802 8:-9875708 MsG0880042512.01.T01:CDS
AATTCCTCATAACCCAATTC+TGG 0.257328 8:+9878585 None:intergenic
AATCAAAACCTCAGGACTTT+TGG 0.309096 8:+9878643 None:intergenic
TGTTGCTTTAAGAGCTGATA+TGG 0.312924 8:-9878451 MsG0880042512.01.T01:CDS
AATGAAGATGGTCTCCCTTA+TGG 0.314381 8:-9874051 MsG0880042512.01.T01:CDS
GAAGAAGACATGGTTTGTTT+TGG 0.321385 8:+9878778 None:intergenic
ACTGGTGTCATTGGCTTCAT+TGG 0.332227 8:-9878492 MsG0880042512.01.T01:CDS
TGAATTGATAAGAGCAGAAT+TGG 0.334675 8:-9878553 MsG0880042512.01.T01:CDS
AAGCCACTTCCTGCCAATAT+TGG 0.337443 8:+9875633 None:intergenic
GATTCATGAGAATCCAGAAT+TGG 0.342684 8:-9878598 MsG0880042512.01.T01:CDS
GTTGCAGTCACTGGTGTCAT+TGG 0.356001 8:-9878501 MsG0880042512.01.T01:CDS
TCATTTATGCAGGTTATCAT+TGG 0.356258 8:-9874360 MsG0880042512.01.T01:intron
AAGTCTTCAGATCCCATAAA+TGG 0.356384 8:+9874180 None:intergenic
TAATGCATTCAATGTTATTC+CGG 0.359601 8:-9874823 MsG0880042512.01.T01:CDS
ACTGCAACTGGATGTTTATA+AGG 0.366834 8:+9878516 None:intergenic
GTCATTGGCTTCATTGGAAC+AGG 0.368975 8:-9878486 MsG0880042512.01.T01:CDS
ATTGGATGATCAATATTAGA+AGG 0.380397 8:-9878623 MsG0880042512.01.T01:exon
CTCTAGGTCTGGTCCAATAT+TGG 0.382393 8:-9875646 MsG0880042512.01.T01:CDS
GCAACTGTGGACTTCCTTCA+TGG 0.390813 8:-9874312 MsG0880042512.01.T01:CDS
GATGACAAAATTTGTGTTGC+AGG 0.392661 8:+9878706 None:intergenic
CATTGAATGCATTACCTCCT+TGG 0.394140 8:+9874832 None:intergenic
GTTAAAGCTTTCTTTAGAAA+AGG 0.408192 8:+9874770 None:intergenic
ATGACACCAGTGACTGCAAC+TGG 0.422420 8:+9878504 None:intergenic
CCCCTCCTTCCTCTGCTGGT+TGG 0.427309 8:+9875766 None:intergenic
GGTGAAGTGGCCTCTAGGTC+TGG 0.429572 8:-9875657 MsG0880042512.01.T01:CDS
CCTGGATACTTCTTCATGCT+TGG 0.432844 8:-9874135 MsG0880042512.01.T01:CDS
GACCCCATATTAGCAGCTTC+CGG 0.436531 8:-9875552 MsG0880042512.01.T01:CDS
GCACCGGAAGCTGCTAATAT+GGG 0.436843 8:+9875549 None:intergenic
CTAGAGGCCACTTCACCAAT+TGG 0.441010 8:+9875663 None:intergenic
TAAGATGAAGATTAGGTGGC+TGG 0.452500 8:+9878883 None:intergenic
CCACCAATTGTGACATGATC+CGG 0.453558 8:+9874804 None:intergenic
ATTCCGGATCATGTCACAAT+TGG 0.455454 8:-9874807 MsG0880042512.01.T01:CDS
AGTGTCATGACACCATTTAT+GGG 0.458073 8:-9874192 MsG0880042512.01.T01:CDS
ATCTATGGCTAAGGCAACAT+TGG 0.459883 8:+9873911 None:intergenic
ATTGCTCCTGACTTACCAAT+TGG 0.462008 8:-9875678 MsG0880042512.01.T01:CDS
TATGGATGCTCTTTCTATGC+AGG 0.463188 8:-9878433 MsG0880042512.01.T01:intron
GCATGAAGTGCAGCTCCATA+AGG 0.472341 8:+9874036 None:intergenic
ACTTCACCAATTGGTAAGTC+AGG 0.474836 8:+9875672 None:intergenic
TTCTATCAAGAGGTCATACC+TGG 0.480618 8:-9874153 MsG0880042512.01.T01:CDS
TCACCATTGTTTACAGTTGG+AGG 0.482103 8:+9874273 None:intergenic
ATGGTAACATATGAATTTGA+AGG 0.483343 8:+9878756 None:intergenic
AACTTAGGAAATGGTGGAGT+GGG 0.484788 8:-9876998 MsG0880042512.01.T01:intron
ATTCATGAGAATCCAGAATT+GGG 0.487924 8:-9878597 MsG0880042512.01.T01:CDS
TTCTTTAGAAAAGGCTCGGA+AGG 0.489629 8:+9874779 None:intergenic
TGAAGAATGCTTCACATAAA+CGG 0.492391 8:-9874110 MsG0880042512.01.T01:CDS
TCTTCATTGATTTCGAGATA+AGG 0.495633 8:+9874066 None:intergenic
GAATCCAGAATTGGGTTATG+AGG 0.496062 8:-9878589 MsG0880042512.01.T01:CDS
CCACACGCATGCATCTTTCC+AGG 0.506178 8:+9876958 None:intergenic
GGCTGATCCTTTAGACTCCC+AGG 0.507269 8:-9875493 MsG0880042512.01.T01:intron
CAATTGGTGAAGTGGCCTCT+AGG 0.510116 8:-9875662 MsG0880042512.01.T01:CDS
TCAGCTCTTAAAGCAACAAA+AGG 0.511836 8:+9878456 None:intergenic
CCGGATCATGTCACAATTGG+TGG 0.516445 8:-9874804 MsG0880042512.01.T01:CDS
GCTCATGTTACCATGCTACT+TGG 0.517522 8:-9876928 MsG0880042512.01.T01:CDS
AAACATCCAGTTGCAGTCAC+TGG 0.520491 8:-9878510 MsG0880042512.01.T01:CDS
TTATCTTCTAAAACATCAGC+AGG 0.527329 8:-9873998 MsG0880042512.01.T01:CDS
CATGAAGTGCAGCTCCATAA+GGG 0.529498 8:+9874037 None:intergenic
TATCTCGAAATCAATGAAGA+TGG 0.530795 8:-9874063 MsG0880042512.01.T01:CDS
CCTCAATCCGCTGTCTCAGT+TGG 0.531634 8:+9874748 None:intergenic
TCCAACCAGCAGAGGAAGGA+GGG 0.531750 8:-9875767 MsG0880042512.01.T01:CDS
AGGTCTGGTCCAATATTGGC+AGG 0.534596 8:-9875642 MsG0880042512.01.T01:CDS
GATCATCCAATCAAAACCTC+AGG 0.538228 8:+9878635 None:intergenic
GGTCCAATATTGGCAGGAAG+TGG 0.538609 8:-9875636 MsG0880042512.01.T01:CDS
CATCAGCAGGATATTGTACC+TGG 0.540608 8:-9873985 MsG0880042512.01.T01:CDS
TCTCTAGAAATTGCTGAATG+AGG 0.542036 8:+9878669 None:intergenic
CCAAGCATGAAGAAGTATCC+AGG 0.546741 8:+9874135 None:intergenic
TAATTTACCTGGGAGTCTAA+AGG 0.547042 8:+9875486 None:intergenic
GTTTAAAACTTAGGAAATGG+TGG 0.554059 8:-9877004 MsG0880042512.01.T01:intron
AGCTTTCTTTAGAAAAGGCT+CGG 0.555043 8:+9874775 None:intergenic
TGTGAAGAATTATGAGATGA+AGG 0.560370 8:+9878808 None:intergenic
CCAACTGAGACAGCGGATTG+AGG 0.561040 8:-9874748 MsG0880042512.01.T01:CDS
TGACTTACCAATTGGTGAAG+TGG 0.570836 8:-9875670 MsG0880042512.01.T01:CDS
CATTCACAAAATGTTCATGC+AGG 0.577020 8:+9874250 None:intergenic
CGGTCCAAGTCATAGGAAGT+TGG 0.577081 8:-9878923 None:intergenic
CAACCAGCAGAGGAAGGAGG+GGG 0.578635 8:-9875765 MsG0880042512.01.T01:CDS
AGGTCACCATTGTTTACAGT+TGG 0.583641 8:+9874270 None:intergenic
GCTCTTAAAGCAACAAAAGG+AGG 0.585596 8:+9878459 None:intergenic
GCAACACCTTGTTTCTCGCG+AGG 0.588370 8:-9875514 MsG0880042512.01.T01:CDS
ATGACAAAATTTGTGTTGCA+GGG 0.590763 8:+9878707 None:intergenic
CCAACCAGCAGAGGAAGGAG+GGG 0.591236 8:-9875766 MsG0880042512.01.T01:CDS
TATCCTCCAACTGTAAACAA+TGG 0.592228 8:-9874276 MsG0880042512.01.T01:CDS
GATCAGCCTCGCGAGAAACA+AGG 0.594248 8:+9875508 None:intergenic
AGACTTCTCATTCTATCAAG+AGG 0.600460 8:-9874163 MsG0880042512.01.T01:CDS
TTCCAACCAGCAGAGGAAGG+AGG 0.601581 8:-9875768 MsG0880042512.01.T01:CDS
AATGTTGCGGTGAATATGCT+TGG 0.603714 8:-9874231 MsG0880042512.01.T01:CDS
GAATTTGAAGGAAGAAGACA+TGG 0.604764 8:+9878768 None:intergenic
TTGCAAGCTAATAATCGCAC+CGG 0.606405 8:+9875533 None:intergenic
CTTTGCAGCACCAAGTAGCA+TGG 0.607237 8:+9876918 None:intergenic
GTGACGATTGCAAAGATCCA+AGG 0.614161 8:-9874849 MsG0880042512.01.T01:CDS
GCTTTAACCAACTGAGACAG+CGG 0.615430 8:-9874755 MsG0880042512.01.T01:CDS
AAACTTAGGAAATGGTGGAG+TGG 0.617389 8:-9876999 MsG0880042512.01.T01:intron
TTGGACAAGCTGCTGTGCAT+AGG 0.618002 8:-9874341 MsG0880042512.01.T01:CDS
GAGCACAAGAGTAAAGTACC+TGG 0.618593 8:-9876976 MsG0880042512.01.T01:CDS
CACCGGAAGCTGCTAATATG+GGG 0.622033 8:+9875550 None:intergenic
ATGGGGTCTATAGATTGTTG+AGG 0.630727 8:+9875567 None:intergenic
GCATAGGTGCAATGCAACTG+TGG 0.658051 8:-9874325 MsG0880042512.01.T01:CDS
CAATATTGGACCAGACCTAG+AGG 0.660996 8:+9875647 None:intergenic
AGAGAGTGCCAAAAGTCCTG+AGG 0.663163 8:-9878651 MsG0880042512.01.T01:five_prime_UTR
TGGTTGGAAAACAAGAACAA+TGG 0.673758 8:+9875782 None:intergenic
ACTGAGACAGCGGATTGAGG+AGG 0.686390 8:-9874745 MsG0880042512.01.T01:intron
CCTGGAAAGATGCATGCGTG+TGG 0.730006 8:-9876958 MsG0880042512.01.T01:CDS
ACGATTGCAAAGATCCAAGG+AGG 0.737015 8:-9874846 MsG0880042512.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTAATATAATGATAAAAAAA+TGG + Chr8:9873958-9873977 None:intergenic 10.0%
!!! TAAGAAAATATTCTTTTTTT+AGG + Chr8:9874860-9874879 None:intergenic 10.0%
!! AAAAGATCATATATACTATA+GGG + Chr8:9875549-9875568 None:intergenic 15.0%
!! TAAAAGATCATATATACTAT+AGG + Chr8:9875550-9875569 None:intergenic 15.0%
!! TATTATGATCTATTATGATT+TGG + Chr8:9874546-9874565 None:intergenic 15.0%
!! TTTATTAGAAGAAAAAAATG+TGG + Chr8:9875162-9875181 None:intergenic 15.0%
!!! AAACTCTAATTTTTTATCTA+TGG + Chr8:9878799-9878818 None:intergenic 15.0%
!!! GACTTTTTATTTTGTTTTAT+GGG - Chr8:9875578-9875597 MsG0880042512.01.T01:CDS 15.0%
!!! TAAGAAAAGATTCTTTTTTT+AGG - Chr8:9874771-9874790 MsG0880042512.01.T01:CDS 15.0%
!!! TAATATCATATTTCTACAAA+GGG - Chr8:9875608-9875627 MsG0880042512.01.T01:CDS 15.0%
!!! TGACTTTTTATTTTGTTTTA+TGG - Chr8:9875577-9875596 MsG0880042512.01.T01:CDS 15.0%
!!! TTTTTTTTAAGATGAAGATT+AGG + Chr8:9873819-9873838 None:intergenic 15.0%
!! AAATGTAAGAATAATTTACC+TGG + Chr8:9877220-9877239 None:intergenic 20.0%
!! AAATGTTGGATATATAAAAG+AGG + Chr8:9875473-9875492 None:intergenic 20.0%
!! AATGTAAGAATAATTTACCT+GGG + Chr8:9877219-9877238 None:intergenic 20.0%
!! AATTTCAGTTAAAAAAGTGA+TGG + Chr8:9874622-9874641 None:intergenic 20.0%
!! ATTACACTTATTTCATACTT+AGG - Chr8:9877260-9877279 MsG0880042512.01.T01:intron 20.0%
!! TATGAAATAAGTGTAATAAG+TGG + Chr8:9877257-9877276 None:intergenic 20.0%
!! TGATATGAATTAAAAATGTG+TGG - Chr8:9876060-9876079 MsG0880042512.01.T01:intron 20.0%
!! TTATGAATTGGTAAAAATGT+TGG + Chr8:9875487-9875506 None:intergenic 20.0%
!! TTGTAATTAAAAGTGAAAAC+AGG + Chr8:9878261-9878280 None:intergenic 20.0%
!! TTTGATACTAACTAAAAGAA+GGG - Chr8:9876579-9876598 MsG0880042512.01.T01:intron 20.0%
!!! CTAATATCATATTTCTACAA+AGG - Chr8:9875607-9875626 MsG0880042512.01.T01:CDS 20.0%
!!! GTATATATGATCTTTTATGA+TGG - Chr8:9875553-9875572 MsG0880042512.01.T01:CDS 20.0%
!!! TAATTTTTTATCTATGGCTA+AGG + Chr8:9878793-9878812 None:intergenic 20.0%
!!! TCTTTTAGTTAGTATCAAAA+TGG + Chr8:9876578-9876597 None:intergenic 20.0%
!!! TTCTTTGAAGCAAAAATAAA+TGG - Chr8:9877080-9877099 MsG0880042512.01.T01:intron 20.0%
!!! TTTTGATACTAACTAAAAGA+AGG - Chr8:9876578-9876597 MsG0880042512.01.T01:intron 20.0%
! AAAAACAATAGAGAAATGTG+TGG + Chr8:9878858-9878877 None:intergenic 25.0%
! AAGAAGTTAAGATCATCAAA+AGG + Chr8:9876427-9876446 None:intergenic 25.0%
! AAGTGAAACATATATCTCTT+TGG - Chr8:9876179-9876198 MsG0880042512.01.T01:intron 25.0%
! AAGTGTAATAAGTGGATAAT+AGG + Chr8:9877249-9877268 None:intergenic 25.0%
! AGAAGAAAAAAATGTGGAAA+AGG + Chr8:9875156-9875175 None:intergenic 25.0%
! AGAAGTTAAGATCATCAAAA+GGG + Chr8:9876426-9876445 None:intergenic 25.0%
! ATGGTAACATATGAATTTGA+AGG + Chr8:9873939-9873958 None:intergenic 25.0%
! ATTACAATACTTCTATCATC+TGG - Chr8:9876481-9876500 MsG0880042512.01.T01:intron 25.0%
! ATTGGATGATCAATATTAGA+AGG - Chr8:9874069-9874088 MsG0880042512.01.T01:CDS 25.0%
! CAAGTAAATAAGATACTGTT+TGG + Chr8:9877490-9877509 None:intergenic 25.0%
! GAAGAAAAAAATGTGGAAAA+GGG + Chr8:9875155-9875174 None:intergenic 25.0%
! GAAGCAAAAATAAATGGAAA+GGG - Chr8:9877086-9877105 MsG0880042512.01.T01:intron 25.0%
! GAGAGAAAAACATTACAAAA+TGG + Chr8:9876527-9876546 None:intergenic 25.0%
! TAATAAGTGGATAATAGGAA+GGG + Chr8:9877244-9877263 None:intergenic 25.0%
! TAATGCATTCAATGTTATTC+CGG - Chr8:9877869-9877888 MsG0880042512.01.T01:intron 25.0%
! TAATTTACAAAACTTGCATC+AGG + Chr8:9876245-9876264 None:intergenic 25.0%
! TCATCTATCATATATCTCTT+TGG - Chr8:9876276-9876295 MsG0880042512.01.T01:intron 25.0%
! TCTACGTAATGTTAATGTTA+GGG - Chr8:9875224-9875243 MsG0880042512.01.T01:intron 25.0%
! TGAAGCAAAAATAAATGGAA+AGG - Chr8:9877085-9877104 MsG0880042512.01.T01:intron 25.0%
! TTAATTCATATCAGAATCTC+AGG + Chr8:9876053-9876072 None:intergenic 25.0%
! TTAGTTAAAGTTGAATCGAT+CGG - Chr8:9875935-9875954 MsG0880042512.01.T01:intron 25.0%
! TTATATTCTGCTTAAACAAG+TGG - Chr8:9875889-9875908 MsG0880042512.01.T01:intron 25.0%
! TTCTACGTAATGTTAATGTT+AGG - Chr8:9875223-9875242 MsG0880042512.01.T01:intron 25.0%
! TTGAAGAGAGTAATAGTTTA+AGG + Chr8:9874299-9874318 None:intergenic 25.0%
! TTTCAAACAATGATGATTCT+TGG + Chr8:9877743-9877762 None:intergenic 25.0%
!! AAAAGTATGAAATCATCACA+AGG + Chr8:9876131-9876150 None:intergenic 25.0%
!! ATGTTTCACTTTGACATTTT+TGG + Chr8:9876170-9876189 None:intergenic 25.0%
!! CATGTTTAAAACTTAGGAAA+TGG - Chr8:9875685-9875704 MsG0880042512.01.T01:CDS 25.0%
!! CTAAGAAAATTTTAGATGCT+GGG - Chr8:9876955-9876974 MsG0880042512.01.T01:CDS 25.0%
!! GTTAAAGCTTTCTTTAGAAA+AGG + Chr8:9877925-9877944 None:intergenic 25.0%
!! TAAGAAAATTTTAGATGCTG+GGG - Chr8:9876956-9876975 MsG0880042512.01.T01:CDS 25.0%
!! TCATCTCATGTTTAAAACTT+AGG - Chr8:9875679-9875698 MsG0880042512.01.T01:CDS 25.0%
!!! ATGCAAGTTTTGTAAATTAC+AGG - Chr8:9876246-9876265 MsG0880042512.01.T01:intron 25.0%
!!! CTTTATTTTGTTGTCTGAAA+GGG - Chr8:9876885-9876904 MsG0880042512.01.T01:intron 25.0%
!!! TATTTTCTTACATTTGAGAC+CGG - Chr8:9874870-9874889 MsG0880042512.01.T01:intron 25.0%
!!! TCTTTATTTTGTTGTCTGAA+AGG - Chr8:9876884-9876903 MsG0880042512.01.T01:intron 25.0%
!!! TGTCTTAGCTTCTTATTTTT+CGG - Chr8:9875842-9875861 MsG0880042512.01.T01:intron 25.0%
!!! TTTTTAAGATGAAGATTAGG+TGG + Chr8:9873816-9873835 None:intergenic 25.0%
AAAAATGTGGAAAAGGGATA+AGG + Chr8:9875149-9875168 None:intergenic 30.0%
AAGATCTCTTGTAAAGCTTT+CGG - Chr8:9877410-9877429 MsG0880042512.01.T01:intron 30.0%
AATTATGTAAGCAAGACAAG+AGG + Chr8:9877807-9877826 None:intergenic 30.0%
ACATGTCAGTATTAATATCG+TGG - Chr8:9876780-9876799 MsG0880042512.01.T01:intron 30.0%
ATGACAAAATTTGTGTTGCA+GGG + Chr8:9873988-9874007 None:intergenic 30.0%
ATTATGTAAGCAAGACAAGA+GGG + Chr8:9877806-9877825 None:intergenic 30.0%
ATTCATGAGAATCCAGAATT+GGG - Chr8:9874095-9874114 MsG0880042512.01.T01:CDS 30.0%
CAGGTTTAACAATCAAAGTA+AGG + Chr8:9878083-9878102 None:intergenic 30.0%
CTACGTAATGTTAATGTTAG+GGG - Chr8:9875225-9875244 MsG0880042512.01.T01:intron 30.0%
CTTGAGAAGAGATTATAAAG+AGG - Chr8:9874442-9874461 MsG0880042512.01.T01:intron 30.0%
GATATAATTTCCCCACAATT+TGG + Chr8:9876219-9876238 None:intergenic 30.0%
GTAAATAAGATACTGTTTGG+AGG + Chr8:9877487-9877506 None:intergenic 30.0%
GTAATAAGTGGATAATAGGA+AGG + Chr8:9877245-9877264 None:intergenic 30.0%
GTAGCATATTACCAAATTGT+GGG - Chr8:9876205-9876224 MsG0880042512.01.T01:intron 30.0%
TAGCATATTACCAAATTGTG+GGG - Chr8:9876206-9876225 MsG0880042512.01.T01:intron 30.0%
TAGTTAAAGTTGAATCGATC+GGG - Chr8:9875936-9875955 MsG0880042512.01.T01:intron 30.0%
TATCTCGAAATCAATGAAGA+TGG - Chr8:9878629-9878648 MsG0880042512.01.T01:exon 30.0%
TCATATATACTATAGGGTGT+TGG + Chr8:9875543-9875562 None:intergenic 30.0%
TCATTTATGCAGGTTATCAT+TGG - Chr8:9878332-9878351 MsG0880042512.01.T01:intron 30.0%
TGAAGAATGCTTCACATAAA+CGG - Chr8:9878582-9878601 MsG0880042512.01.T01:CDS 30.0%
TGAATTGATAAGAGCAGAAT+TGG - Chr8:9874139-9874158 MsG0880042512.01.T01:CDS 30.0%
TGTAGCATATTACCAAATTG+TGG - Chr8:9876204-9876223 MsG0880042512.01.T01:intron 30.0%
TGTGAAGAATTATGAGATGA+AGG + Chr8:9873887-9873906 None:intergenic 30.0%
TTGTAGAGTTAATGACACTT+TGG + Chr8:9876101-9876120 None:intergenic 30.0%
TTTACAGTTGGAGGATAAAA+AGG + Chr8:9878413-9878432 None:intergenic 30.0%
! ATCAGAGTGATAAGATGTTT+TGG + Chr8:9875295-9875314 None:intergenic 30.0%
! CTTTGATTCAAGTTTGACAT+TGG + Chr8:9876363-9876382 None:intergenic 30.0%
! GCTAAGAAAATTTTAGATGC+TGG - Chr8:9876954-9876973 MsG0880042512.01.T01:CDS 30.0%
! GTTTAAAACTTAGGAAATGG+TGG - Chr8:9875688-9875707 MsG0880042512.01.T01:CDS 30.0%
! TACTTTTCTCAGTATTGTCT+TGG - Chr8:9876831-9876850 MsG0880042512.01.T01:intron 30.0%
! TCAAAATCTTGCTTAGTTCT+TGG - Chr8:9876545-9876564 MsG0880042512.01.T01:intron 30.0%
! TCTTTTCTTACATATGAGAC+CGG + Chr8:9874761-9874780 None:intergenic 30.0%
! TGAAAATCCGTCAATTTTGT+CGG - Chr8:9874367-9874386 MsG0880042512.01.T01:intron 30.0%
! TGAACATTTTGTGAATGTTG+CGG - Chr8:9878448-9878467 MsG0880042512.01.T01:CDS 30.0%
! TTTCATACTTAGGCTCTTTT+TGG - Chr8:9877270-9877289 MsG0880042512.01.T01:intron 30.0%
!! CATTGGAAAAGAAGTATCTA+AGG + Chr8:9876346-9876365 None:intergenic 30.0%
!! TCTTCATTGATTTCGAGATA+AGG + Chr8:9878629-9878648 None:intergenic 30.0%
!! TTATCTTCTAAAACATCAGC+AGG - Chr8:9878694-9878713 MsG0880042512.01.T01:five_prime_UTR 30.0%
!!! AGATGTTTTGGTGATTTGTA+TGG + Chr8:9875283-9875302 None:intergenic 30.0%
AAAAAGGTTTCACTCCATGA+AGG + Chr8:9878397-9878416 None:intergenic 35.0%
AAGCTGGAAATTGTAGAGTT+TGG - Chr8:9874677-9874696 MsG0880042512.01.T01:intron 35.0%
AAGTCTTCAGATCCCATAAA+TGG + Chr8:9878515-9878534 None:intergenic 35.0%
AATTCCTCATAACCCAATTC+TGG + Chr8:9874110-9874129 None:intergenic 35.0%
ACAGCATGAAAAAGAGATAC+AGG - Chr8:9875805-9875824 MsG0880042512.01.T01:intron 35.0%
ACTGACATGTTAAACAGACA+TGG + Chr8:9876812-9876831 None:intergenic 35.0%
ACTGCAACTGGATGTTTATA+AGG + Chr8:9874179-9874198 None:intergenic 35.0%
AGAATCCTATCTATCCAATG+TGG + Chr8:9874424-9874443 None:intergenic 35.0%
AGACTATTAAGAGCCTAAGT+AGG - Chr8:9877626-9877645 MsG0880042512.01.T01:intron 35.0%
AGACTTCTCATTCTATCAAG+AGG - Chr8:9878529-9878548 MsG0880042512.01.T01:CDS 35.0%
AGTGTCATGACACCATTTAT+GGG - Chr8:9878500-9878519 MsG0880042512.01.T01:CDS 35.0%
ATCTCACATCGCTTATGAAT+TGG + Chr8:9875499-9875518 None:intergenic 35.0%
ATTTGTATGGAGCAACATAG+AGG + Chr8:9875270-9875289 None:intergenic 35.0%
CATTCACAAAATGTTCATGC+AGG + Chr8:9878445-9878464 None:intergenic 35.0%
CGTAAAGTTAACTCAGAAAC+AGG - Chr8:9878118-9878137 MsG0880042512.01.T01:intron 35.0%
CTAACTCATCCATACAAAAC+CGG + Chr8:9874489-9874508 None:intergenic 35.0%
CTCATATACGTAATGCCTTA+AGG + Chr8:9875447-9875466 None:intergenic 35.0%
CTGATTGCTTAGCATAGTTA+TGG + Chr8:9877547-9877566 None:intergenic 35.0%
GAAAATGTCACTGCTATCTT+TGG - Chr8:9876984-9877003 MsG0880042512.01.T01:CDS 35.0%
GAATCCTATCTATCCAATGT+GGG + Chr8:9874423-9874442 None:intergenic 35.0%
GAATTTATCAGTAATCCACG+AGG + Chr8:9876866-9876885 None:intergenic 35.0%
GAATTTGAAGGAAGAAGACA+TGG + Chr8:9873927-9873946 None:intergenic 35.0%
GAGAAGAGATTATAAAGAGG+AGG - Chr8:9874445-9874464 MsG0880042512.01.T01:intron 35.0%
GATGACAAAATTTGTGTTGC+AGG + Chr8:9873989-9874008 None:intergenic 35.0%
GATTCATGAGAATCCAGAAT+TGG - Chr8:9874094-9874113 MsG0880042512.01.T01:CDS 35.0%
GCAAAAATAAATGGAAAGGG+AGG - Chr8:9877089-9877108 MsG0880042512.01.T01:intron 35.0%
TAATTTACCTGGGAGTCTAA+AGG + Chr8:9877209-9877228 None:intergenic 35.0%
TACGTACAATCAAGCTAATC+AGG + Chr8:9878102-9878121 None:intergenic 35.0%
TAGTGTCATGACACCATTTA+TGG - Chr8:9878499-9878518 MsG0880042512.01.T01:CDS 35.0%
TATCCTCCAACTGTAAACAA+TGG - Chr8:9878416-9878435 MsG0880042512.01.T01:intron 35.0%
TCAAGTCGTTTATCCAAACA+AGG - Chr8:9878297-9878316 MsG0880042512.01.T01:intron 35.0%
TCAGCTCTTAAAGCAACAAA+AGG + Chr8:9874239-9874258 None:intergenic 35.0%
TGCATAAATGAATCAGTCCT+AGG + Chr8:9878323-9878342 None:intergenic 35.0%
TGGTTGGAAAACAAGAACAA+TGG + Chr8:9876913-9876932 None:intergenic 35.0%
TGTCAGTATTAATATCGTGG+CGG - Chr8:9876783-9876802 MsG0880042512.01.T01:intron 35.0%
TTATGTAAGCAAGACAAGAG+GGG + Chr8:9877805-9877824 None:intergenic 35.0%
! AAGCTGATGATGCATACTAT+AGG + Chr8:9878038-9878057 None:intergenic 35.0%
! AATCAAAACCTCAGGACTTT+TGG + Chr8:9874052-9874071 None:intergenic 35.0%
! ACGTAATGCCTTAAGGTTTT+GGG + Chr8:9875440-9875459 None:intergenic 35.0%
! AGCTTTCTTTAGAAAAGGCT+CGG + Chr8:9877920-9877939 None:intergenic 35.0%
! AGTTTTCACTACATACTCTG+TGG - Chr8:9878814-9878833 MsG0880042512.01.T01:five_prime_UTR 35.0%
! ATTATGTAAAGTACTCCCTC+CGG + Chr8:9874892-9874911 None:intergenic 35.0%
! TACGTAATGCCTTAAGGTTT+TGG + Chr8:9875441-9875460 None:intergenic 35.0%
! TAGGACTGATTCATTTATGC+AGG - Chr8:9878322-9878341 MsG0880042512.01.T01:intron 35.0%
! TCTCTAGAAATTGCTGAATG+AGG + Chr8:9874026-9874045 None:intergenic 35.0%
! TGATATTTTCTCTCAACACC+AGG + Chr8:9878728-9878747 None:intergenic 35.0%
! TTCCAGCTTCACATTTTTCA+CGG + Chr8:9874666-9874685 None:intergenic 35.0%
!! AAAAGTCCTGAGGTTTTGAT+TGG - Chr8:9874051-9874070 MsG0880042512.01.T01:CDS 35.0%
!! TCTTGTGGTTCTAAAGCATT+TGG + Chr8:9875396-9875415 None:intergenic 35.0%
!! TGTTGCTTTAAGAGCTGATA+TGG - Chr8:9874241-9874260 MsG0880042512.01.T01:CDS 35.0%
!!! GAAGAAGACATGGTTTGTTT+TGG + Chr8:9873917-9873936 None:intergenic 35.0%
AATGAAGATGGTCTCCCTTA+TGG - Chr8:9878641-9878660 MsG0880042512.01.T01:five_prime_UTR 40.0%
AATGTTGCGGTGAATATGCT+TGG - Chr8:9878461-9878480 MsG0880042512.01.T01:CDS 40.0%
ACTTCACCAATTGGTAAGTC+AGG + Chr8:9877023-9877042 None:intergenic 40.0%
AGGTCACCATTGTTTACAGT+TGG + Chr8:9878425-9878444 None:intergenic 40.0%
ATCTATGGCTAAGGCAACAT+TGG + Chr8:9878784-9878803 None:intergenic 40.0%
ATGGGGTCTATAGATTGTTG+AGG + Chr8:9877128-9877147 None:intergenic 40.0%
ATTCCGGATCATGTCACAAT+TGG - Chr8:9877885-9877904 MsG0880042512.01.T01:intron 40.0%
ATTGCTCCTGACTTACCAAT+TGG - Chr8:9877014-9877033 MsG0880042512.01.T01:intron 40.0%
CACTTTGGACAATAGAGAAG+TGG + Chr8:9876086-9876105 None:intergenic 40.0%
CATAACTGAGAGTCATGCAT+TGG - Chr8:9878204-9878223 MsG0880042512.01.T01:intron 40.0%
CATTGAATGCATTACCTCCT+TGG + Chr8:9877863-9877882 None:intergenic 40.0%
CCACAAATAGGTTCCTACTT+AGG + Chr8:9877642-9877661 None:intergenic 40.0%
CCTAAGTAGGAACCTATTTG+TGG - Chr8:9877639-9877658 MsG0880042512.01.T01:intron 40.0%
CCTGCTTCTTCTGCATAAAA+TGG - Chr8:9877672-9877691 MsG0880042512.01.T01:intron 40.0%
CTGACTCCCCAATATACATA+GGG + Chr8:9875348-9875367 None:intergenic 40.0%
GAATCCAGAATTGGGTTATG+AGG - Chr8:9874103-9874122 MsG0880042512.01.T01:CDS 40.0%
GAGCTAATGTAAACAGCTCA+TGG + Chr8:9877465-9877484 None:intergenic 40.0%
GATCATCCAATCAAAACCTC+AGG + Chr8:9874060-9874079 None:intergenic 40.0%
GATGATGCATACTATAGGAG+AGG + Chr8:9878033-9878052 None:intergenic 40.0%
GCTAACACCGACAAAATTGA+CGG + Chr8:9874377-9874396 None:intergenic 40.0%
GCTCTTAAAGCAACAAAAGG+AGG + Chr8:9874236-9874255 None:intergenic 40.0%
TAAACCCTCCCAGTTTCTAT+GGG + Chr8:9876003-9876022 None:intergenic 40.0%
TAAGATGAAGATTAGGTGGC+TGG + Chr8:9873812-9873831 None:intergenic 40.0%
TAGTCCCACATTGGATAGAT+AGG - Chr8:9874416-9874435 MsG0880042512.01.T01:intron 40.0%
TATGGATGCTCTTTCTATGC+AGG - Chr8:9874259-9874278 MsG0880042512.01.T01:CDS 40.0%
TCACCATTGTTTACAGTTGG+AGG + Chr8:9878422-9878441 None:intergenic 40.0%
TCCATGGCTGGAATAATTCA+TGG - Chr8:9875974-9875993 MsG0880042512.01.T01:intron 40.0%
TGACTCCCCAATATACATAG+GGG + Chr8:9875347-9875366 None:intergenic 40.0%
TGACTTACCAATTGGTGAAG+TGG - Chr8:9877022-9877041 MsG0880042512.01.T01:intron 40.0%
TGCCTTCCCCTATGTATATT+GGG - Chr8:9875338-9875357 MsG0880042512.01.T01:intron 40.0%
TTCTATCAAGAGGTCATACC+TGG - Chr8:9878539-9878558 MsG0880042512.01.T01:CDS 40.0%
TTCTTACATATGAGACCGGA+GGG + Chr8:9874757-9874776 None:intergenic 40.0%
TTGCAAGCTAATAATCGCAC+CGG + Chr8:9877162-9877181 None:intergenic 40.0%
TTGCCTTCCCCTATGTATAT+TGG - Chr8:9875337-9875356 MsG0880042512.01.T01:intron 40.0%
TTGTAGAGTTTGGCAAAACG+TGG - Chr8:9874687-9874706 MsG0880042512.01.T01:intron 40.0%
TTTATCAGTAATCCACGAGG+AGG + Chr8:9876863-9876882 None:intergenic 40.0%
TTTCTTACATATGAGACCGG+AGG + Chr8:9874758-9874777 None:intergenic 40.0%
! AAACTTAGGAAATGGTGGAG+TGG - Chr8:9875693-9875712 MsG0880042512.01.T01:CDS 40.0%
! AACTTAGGAAATGGTGGAGT+GGG - Chr8:9875694-9875713 MsG0880042512.01.T01:CDS 40.0%
! AGTTTGGCAAAACGTGGTTT+TGG - Chr8:9874693-9874712 MsG0880042512.01.T01:intron 40.0%
! CCATTTTATGCAGAAGAAGC+AGG + Chr8:9877675-9877694 None:intergenic 40.0%
! GCACTGACACTTCAGATTAA+AGG - Chr8:9876683-9876702 MsG0880042512.01.T01:intron 40.0%
! GGTGGAAGTTTTCCACAAAT+AGG + Chr8:9877654-9877673 None:intergenic 40.0%
! TTCTTACATTTGAGACCGGA+GGG - Chr8:9874874-9874893 MsG0880042512.01.T01:intron 40.0%
! TTCTTTAGAAAAGGCTCGGA+AGG + Chr8:9877916-9877935 None:intergenic 40.0%
! TTTCTTACATTTGAGACCGG+AGG - Chr8:9874873-9874892 MsG0880042512.01.T01:intron 40.0%
! TTTTATGCAGAAGAAGCAGG+TGG + Chr8:9877672-9877691 None:intergenic 40.0%
! TTTTCACGGTGGAAATGCAT+TGG + Chr8:9874652-9874671 None:intergenic 40.0%
!! ATGCTTTAGAACCACAAGAG+AGG - Chr8:9875397-9875416 MsG0880042512.01.T01:intron 40.0%
!! CGGTTTTGTATGGATGAGTT+AGG - Chr8:9874487-9874506 MsG0880042512.01.T01:intron 40.0%
!! TGCTTTAGAACCACAAGAGA+GGG - Chr8:9875398-9875417 MsG0880042512.01.T01:intron 40.0%
!!! GAAGACATGGTTTGTTTTGG+TGG + Chr8:9873914-9873933 None:intergenic 40.0%
!!! GTCAATTTTGTCGGTGTTAG+CGG - Chr8:9874376-9874395 MsG0880042512.01.T01:intron 40.0%
!!! TAATGCCTTAAGGTTTTGGG+TGG + Chr8:9875437-9875456 None:intergenic 40.0%
AAACATCCAGTTGCAGTCAC+TGG - Chr8:9874182-9874201 MsG0880042512.01.T01:CDS 45.0%
AACAAGTGGCTTGACTCAGT+TGG - Chr8:9875903-9875922 MsG0880042512.01.T01:intron 45.0%
AAGCCACTTCCTGCCAATAT+TGG + Chr8:9877062-9877081 None:intergenic 45.0%
AATGTGGGACTAAATCCCCT+CGG + Chr8:9874408-9874427 None:intergenic 45.0%
ACGATTGCAAAGATCCAAGG+AGG - Chr8:9877846-9877865 MsG0880042512.01.T01:intron 45.0%
ATGTATATTGGGGAGTCAGG+AGG - Chr8:9875349-9875368 MsG0880042512.01.T01:intron 45.0%
CAATATTGGACCAGACCTAG+AGG + Chr8:9877048-9877067 None:intergenic 45.0%
CACCGTGAAAAATGTGAAGC+TGG - Chr8:9874661-9874680 MsG0880042512.01.T01:intron 45.0%
CATCAGCAGGATATTGTACC+TGG - Chr8:9878707-9878726 MsG0880042512.01.T01:five_prime_UTR 45.0%
CATCTCCACCCAAAACCTTA+AGG - Chr8:9875429-9875448 MsG0880042512.01.T01:intron 45.0%
CATGAAGTGCAGCTCCATAA+GGG + Chr8:9878658-9878677 None:intergenic 45.0%
CCACCAATTGTGACATGATC+CGG + Chr8:9877891-9877910 None:intergenic 45.0%
CCTATGTATATTGGGGAGTC+AGG - Chr8:9875346-9875365 MsG0880042512.01.T01:intron 45.0%
CCTGACTCCCCAATATACAT+AGG + Chr8:9875349-9875368 None:intergenic 45.0%
CCTGGATACTTCTTCATGCT+TGG - Chr8:9878557-9878576 MsG0880042512.01.T01:CDS 45.0%
CGTTTATCCAAACAAGGCCT+AGG - Chr8:9878303-9878322 MsG0880042512.01.T01:intron 45.0%
CTAAACCCTCCCAGTTTCTA+TGG + Chr8:9876004-9876023 None:intergenic 45.0%
CTCTAGGTCTGGTCCAATAT+TGG - Chr8:9877046-9877065 MsG0880042512.01.T01:intron 45.0%
GCCATGAATTATTCCAGCCA+TGG + Chr8:9875978-9875997 None:intergenic 45.0%
GCCTTCCCCTATGTATATTG+GGG - Chr8:9875339-9875358 MsG0880042512.01.T01:intron 45.0%
GCTCATGTTACCATGCTACT+TGG - Chr8:9875764-9875783 MsG0880042512.01.T01:CDS 45.0%
GCTTTAACCAACTGAGACAG+CGG - Chr8:9877937-9877956 MsG0880042512.01.T01:intron 45.0%
GTGACGATTGCAAAGATCCA+AGG - Chr8:9877843-9877862 MsG0880042512.01.T01:intron 45.0%
TACATAATTCATGCTCCCGC+AGG - Chr8:9877818-9877837 MsG0880042512.01.T01:intron 45.0%
TCCCCAATATACATAGGGGA+AGG + Chr8:9875343-9875362 None:intergenic 45.0%
TTTGCAATCGTCACAACCTG+CGG + Chr8:9877837-9877856 None:intergenic 45.0%
! ACTGAGAGTCATGCATTGGT+TGG - Chr8:9878208-9878227 MsG0880042512.01.T01:intron 45.0%
! CAGCTTCACATTTTTCACGG+TGG + Chr8:9874663-9874682 None:intergenic 45.0%
! CGGATTGAGGAGGTATGTAT+TGG - Chr8:9877957-9877976 MsG0880042512.01.T01:intron 45.0%
! CTGAAGTGTCAGTGCTACAT+AGG + Chr8:9876678-9876697 None:intergenic 45.0%
! GAGCACAAGAGTAAAGTACC+TGG - Chr8:9875716-9875735 MsG0880042512.01.T01:CDS 45.0%
!! AATCAGTCCTAGGCCTTGTT+TGG + Chr8:9878313-9878332 None:intergenic 45.0%
!! ACTCGAGTTTTATCCATGGC+TGG - Chr8:9875962-9875981 MsG0880042512.01.T01:intron 45.0%
!! ACTGGTGTCATTGGCTTCAT+TGG - Chr8:9874200-9874219 MsG0880042512.01.T01:CDS 45.0%
!! CCAAGCATGAAGAAGTATCC+AGG + Chr8:9878560-9878579 None:intergenic 45.0%
!! CCATACAAAACCGGCTTGTA+TGG + Chr8:9874480-9874499 None:intergenic 45.0%
!! CCATACAAGCCGGTTTTGTA+TGG - Chr8:9874477-9874496 MsG0880042512.01.T01:intron 45.0%
!! GAGCACTCGAGTTTTATCCA+TGG - Chr8:9875958-9875977 MsG0880042512.01.T01:intron 45.0%
!! GTCATTGGCTTCATTGGAAC+AGG - Chr8:9874206-9874225 MsG0880042512.01.T01:CDS 45.0%
!!! TCTTGTTTTCCAACCAGCAG+AGG - Chr8:9876917-9876936 MsG0880042512.01.T01:CDS 45.0%
!!! TGGCAAAACGTGGTTTTGGT+GGG - Chr8:9874697-9874716 MsG0880042512.01.T01:intron 45.0%
!!! TTGGCAAAACGTGGTTTTGG+TGG - Chr8:9874696-9874715 MsG0880042512.01.T01:intron 45.0%
!! GAATAATAATAATATAATAA+CGG + Chr8:9876638-9876657 None:intergenic 5.0%
AGGTCTGGTCCAATATTGGC+AGG - Chr8:9877050-9877069 MsG0880042512.01.T01:intron 50.0%
ATGACACCAGTGACTGCAAC+TGG + Chr8:9874191-9874210 None:intergenic 50.0%
CAATTGGTGAAGTGGCCTCT+AGG - Chr8:9877030-9877049 MsG0880042512.01.T01:intron 50.0%
CACCGGAAGCTGCTAATATG+GGG + Chr8:9877145-9877164 None:intergenic 50.0%
CATGGCCACCCATAGAAACT+GGG - Chr8:9875992-9876011 MsG0880042512.01.T01:intron 50.0%
CCGGATCATGTCACAATTGG+TGG - Chr8:9877888-9877907 MsG0880042512.01.T01:intron 50.0%
CGCAGCTGTAACGAATATCG+AGG + Chr8:9874513-9874532 None:intergenic 50.0%
CTAGAGGCCACTTCACCAAT+TGG + Chr8:9877032-9877051 None:intergenic 50.0%
CTTTGCAGCACCAAGTAGCA+TGG + Chr8:9875777-9875796 None:intergenic 50.0%
GACCCCATATTAGCAGCTTC+CGG - Chr8:9877140-9877159 MsG0880042512.01.T01:intron 50.0%
GAGGGGATTTAGTCCCACAT+TGG - Chr8:9874407-9874426 MsG0880042512.01.T01:intron 50.0%
GCAACTGTGGACTTCCTTCA+TGG - Chr8:9878380-9878399 MsG0880042512.01.T01:intron 50.0%
GCACCGGAAGCTGCTAATAT+GGG + Chr8:9877146-9877165 None:intergenic 50.0%
GCATAGGTGCAATGCAACTG+TGG - Chr8:9878367-9878386 MsG0880042512.01.T01:intron 50.0%
GCATGAAGTGCAGCTCCATA+AGG + Chr8:9878659-9878678 None:intergenic 50.0%
GGTCCAATATTGGCAGGAAG+TGG - Chr8:9877056-9877075 MsG0880042512.01.T01:intron 50.0%
TATCGGAGGGTTTGCCATCA+CGG + Chr8:9874729-9874748 None:intergenic 50.0%
TCATGGCCACCCATAGAAAC+TGG - Chr8:9875991-9876010 MsG0880042512.01.T01:intron 50.0%
TTGCAATCGTCACAACCTGC+GGG + Chr8:9877836-9877855 None:intergenic 50.0%
TTGGACAAGCTGCTGTGCAT+AGG - Chr8:9878351-9878370 MsG0880042512.01.T01:intron 50.0%
! GTTTTCCAACCAGCAGAGGA+AGG - Chr8:9876921-9876940 MsG0880042512.01.T01:CDS 50.0%
!! AGAGAGTGCCAAAAGTCCTG+AGG - Chr8:9874041-9874060 MsG0880042512.01.T01:CDS 50.0%
!! CAAAACCGGCTTGTATGGTG+AGG + Chr8:9874475-9874494 None:intergenic 50.0%
!! GAGACCGGAGGGAGTATTAT+CGG + Chr8:9874746-9874765 None:intergenic 50.0%
!! GTTGCAGTCACTGGTGTCAT+TGG - Chr8:9874191-9874210 MsG0880042512.01.T01:CDS 50.0%
ACCCTCCCAGTTTCTATGGG+TGG + Chr8:9876000-9876019 None:intergenic 55.0%
CCACACGCATGCATCTTTCC+AGG + Chr8:9875737-9875756 None:intergenic 55.0%
CCCTCCGATAATACTCCCTC+CGG - Chr8:9874739-9874758 MsG0880042512.01.T01:intron 55.0%
CCTCAATCCGCTGTCTCAGT+TGG + Chr8:9877947-9877966 None:intergenic 55.0%
CCTGGAAAGATGCATGCGTG+TGG - Chr8:9875734-9875753 MsG0880042512.01.T01:CDS 55.0%
CGCACCGGAAGCTGCTAATA+TGG + Chr8:9877147-9877166 None:intergenic 55.0%
GATCAGCCTCGCGAGAAACA+AGG + Chr8:9877187-9877206 None:intergenic 55.0%
GCACTCCTCACCATACAAGC+CGG - Chr8:9874467-9874486 MsG0880042512.01.T01:intron 55.0%
GCCACCCATAGAAACTGGGA+GGG - Chr8:9875996-9876015 MsG0880042512.01.T01:intron 55.0%
GGAGCAACATAGAGGCGACA+CGG + Chr8:9875262-9875281 None:intergenic 55.0%
GGCTGATCCTTTAGACTCCC+AGG - Chr8:9877199-9877218 MsG0880042512.01.T01:intron 55.0%
TCCAACCAGCAGAGGAAGGA+GGG - Chr8:9876925-9876944 MsG0880042512.01.T01:CDS 55.0%
TGTGTCGTCTCCCTCTCTTG+TGG + Chr8:9875411-9875430 None:intergenic 55.0%
TTCCAACCAGCAGAGGAAGG+AGG - Chr8:9876924-9876943 MsG0880042512.01.T01:CDS 55.0%
! GCAACACCTTGTTTCTCGCG+AGG - Chr8:9877178-9877197 MsG0880042512.01.T01:intron 55.0%
! GGACTAAATCCCCTCGGTGT+TGG + Chr8:9874402-9874421 None:intergenic 55.0%
! TCTTGGTCTTCACCTCCTCG+TGG - Chr8:9876848-9876867 MsG0880042512.01.T01:intron 55.0%
! TTGGTGGGTATCCACCGTGA+TGG - Chr8:9874712-9874731 MsG0880042512.01.T01:intron 55.0%
!! ACCGGAGGGAGTATTATCGG+AGG + Chr8:9874743-9874762 None:intergenic 55.0%
!! ACTGAGACAGCGGATTGAGG+AGG - Chr8:9877947-9877966 MsG0880042512.01.T01:intron 55.0%
!! AGGAGCGTCGGGAGAAACAA+CGG - Chr8:9875369-9875388 MsG0880042512.01.T01:intron 55.0%
!! CCAACTGAGACAGCGGATTG+AGG - Chr8:9877944-9877963 MsG0880042512.01.T01:intron 55.0%
!! CCGGAGGGAGTATTATCGGA+GGG + Chr8:9874742-9874761 None:intergenic 55.0%
CAACCAGCAGAGGAAGGAGG+GGG - Chr8:9876927-9876946 MsG0880042512.01.T01:CDS 60.0%
CCAACCAGCAGAGGAAGGAG+GGG - Chr8:9876926-9876945 MsG0880042512.01.T01:CDS 60.0%
GGCCACCCATAGAAACTGGG+AGG - Chr8:9875995-9876014 MsG0880042512.01.T01:intron 60.0%
GGTGAAGTGGCCTCTAGGTC+TGG - Chr8:9877035-9877054 MsG0880042512.01.T01:intron 60.0%
GTGTTAGCGGCCAACACCGA+GGG - Chr8:9874389-9874408 MsG0880042512.01.T01:intron 60.0%
TGTTAGCGGCCAACACCGAG+GGG - Chr8:9874390-9874409 MsG0880042512.01.T01:intron 60.0%
!! GGAGCGTCGGGAGAAACAAC+GGG - Chr8:9875370-9875389 MsG0880042512.01.T01:intron 60.0%
AGCAGAGGAAGGAGGGGGAG+GGG - Chr8:9876932-9876951 MsG0880042512.01.T01:CDS 65.0%
CAGCAGAGGAAGGAGGGGGA+GGG - Chr8:9876931-9876950 MsG0880042512.01.T01:CDS 65.0%
CCCCTCCTTCCTCTGCTGGT+TGG + Chr8:9876929-9876948 None:intergenic 65.0%
CGGAGGGTTTGCCATCACGG+TGG + Chr8:9874726-9874745 None:intergenic 65.0%
GGTGTTAGCGGCCAACACCG+AGG - Chr8:9874388-9874407 MsG0880042512.01.T01:intron 65.0%
! TGGGGAGTCAGGAGGAGCGT+CGG - Chr8:9875357-9875376 MsG0880042512.01.T01:intron 65.0%
CCAGCAGAGGAAGGAGGGGG+AGG - Chr8:9876930-9876949 MsG0880042512.01.T01:CDS 70.0%
CCTCCCCCTCCTTCCTCTGC+TGG + Chr8:9876933-9876952 None:intergenic 70.0%
!! GGGGAGTCAGGAGGAGCGTC+GGG - Chr8:9875358-9875377 MsG0880042512.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 9873780 9878934 9873780 ID=MsG0880042512.01;Name=MsG0880042512.01
Chr8 mRNA 9873780 9878934 9873780 ID=MsG0880042512.01.T01;Parent=MsG0880042512.01;Name=MsG0880042512.01.T01;_AED=0.41;_eAED=0.41;_QI=294|1|1|1|1|1|5|174|397
Chr8 exon 9873780 9874370 9873780 ID=MsG0880042512.01.T01:exon:2662;Parent=MsG0880042512.01.T01
Chr8 exon 9874746 9874874 9874746 ID=MsG0880042512.01.T01:exon:2661;Parent=MsG0880042512.01.T01
Chr8 exon 9875494 9875808 9875494 ID=MsG0880042512.01.T01:exon:2660;Parent=MsG0880042512.01.T01
Chr8 exon 9876888 9877013 9876888 ID=MsG0880042512.01.T01:exon:2659;Parent=MsG0880042512.01.T01
Chr8 exon 9878434 9878934 9878434 ID=MsG0880042512.01.T01:exon:2658;Parent=MsG0880042512.01.T01
Chr8 five_prime_UTR 9878641 9878934 9878641 ID=MsG0880042512.01.T01:five_prime_utr;Parent=MsG0880042512.01.T01
Chr8 CDS 9878434 9878640 9878434 ID=MsG0880042512.01.T01:cds;Parent=MsG0880042512.01.T01
Chr8 CDS 9876888 9877013 9876888 ID=MsG0880042512.01.T01:cds;Parent=MsG0880042512.01.T01
Chr8 CDS 9875494 9875808 9875494 ID=MsG0880042512.01.T01:cds;Parent=MsG0880042512.01.T01
Chr8 CDS 9874746 9874874 9874746 ID=MsG0880042512.01.T01:cds;Parent=MsG0880042512.01.T01
Chr8 CDS 9873954 9874370 9873954 ID=MsG0880042512.01.T01:cds;Parent=MsG0880042512.01.T01
Chr8 three_prime_UTR 9873780 9873953 9873780 ID=MsG0880042512.01.T01:three_prime_utr;Parent=MsG0880042512.01.T01
Gene Sequence

>MsG0880042512.01.T01

ATGATCAATATTAGAAGGAAGATTCATGAGAATCCAGAATTGGGTTATGAGGAATTTGAGACAAGTGAATTGATAAGAGCAGAATTGGATAAGATGAGTATTCCTTATAAACATCCAGTTGCAGTCACTGGTGTCATTGGCTTCATTGGAACAGGAATGCCTCCTTTTGTTGCTTTAAGAGCTGATATGGATGCTCTTTCTATGCAGGAAATGGTGGAGTGGGAGCACAAGAGTAAAGTACCTGGAAAGATGCATGCGTGTGGTCATGATGCTCATGTTACCATGCTACTTGGTGCTGCAAAGATTCTCAAACAGCATGAAAAAGAGATACAGGGAACCATTGTTCTTGTTTTCCAACCAGCAGAGGAAGGAGGGGGAGGGGCTAAGAAAATTTTAGATGCTGGGGCATTAGAAAATGTCACTGCTATCTTTGGATTGCATATTGCTCCTGACTTACCAATTGGTGAAGTGGCCTCTAGGTCTGGTCCAATATTGGCAGGAAGTGGCTTCTTTGAAGCAAAAATAAATGGAAAGGGAGGTCATGCAGCTATTCCTCAACAATCTATAGACCCCATATTAGCAGCTTCCGGTGCGATTATTAGCTTGCAACACCTTGTTTCTCGCGAGGCTGATCCTTTAGACTCCCAGGTTGTGACGATTGCAAAGATCCAAGGAGGTAATGCATTCAATGTTATTCCGGATCATGTCACAATTGGTGGTACCTTCCGAGCCTTTTCTAAAGAAAGCTTTAACCAACTGAGACAGCGGATTGAGGAGGTTATCATTGGACAAGCTGCTGTGCATAGGTGCAATGCAACTGTGGACTTCCTTCATGGAGTGAAACCTTTTTATCCTCCAACTGTAAACAATGGTGACCTGCATGAACATTTTGTGAATGTTGCGGTGAATATGCTTGGCATCAACAATGTTGATAGTGTCATGACACCATTTATGGGATCTGAAGACTTCTCATTCTATCAAGAGGTCATACCTGGATACTTCTTCATGCTTGGAGTGAAGAATGCTTCACATAAACGGTTCGAGTCTTTATTACACTCACCTTATCTCGAAATCAATGAAGATGGTCTCCCTTATGGAGCTGCACTTCATGCATCTTTAGCTGCTAGTTATCTTCTAAAACATCAGCAGGATATTGTACCTGGTGTTGAGAGAAAATATCATGATGAATTATAA
Protein sequence

>MsG0880042512.01.T01

MINIRRKIHENPELGYEEFETSELIRAELDKMSIPYKHPVAVTGVIGFIGTGMPPFVALRADMDALSMQEMVEWEHKSKVPGKMHACGHDAHVTMLLGAAKILKQHEKEIQGTIVLVFQPAEEGGGGAKKILDAGALENVTAIFGLHIAPDLPIGEVASRSGPILAGSGFFEAKINGKGGHAAIPQQSIDPILAASGAIISLQHLVSREADPLDSQVVTIAKIQGGNAFNVIPDHVTIGGTFRAFSKESFNQLRQRIEEVIIGQAAVHRCNATVDFLHGVKPFYPPTVNNGDLHEHFVNVAVNMLGINNVDSVMTPFMGSEDFSFYQEVIPGYFFMLGVKNASHKRFESLLHSPYLEINEDGLPYGAALHASLAASYLLKHQQDIVPGVERKYHDEL*