Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016663.01.T01 | AES72641.1 | 98.707 | 232 | 3 | 0 | 1 | 232 | 62 | 293 | 2.32E-166 | 470 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016663.01.T01 | G7J908 | 98.707 | 232 | 3 | 0 | 1 | 232 | 62 | 293 | 1.11e-166 | 470 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047967.01 | MsG0380016663.01 | 0.800780 | 1.227200e-48 | 5.763780e-46 |
| MsG0180003324.01 | MsG0380016663.01 | 0.824158 | 9.390290e-54 | 8.251570e-51 |
| MsG0180005369.01 | MsG0380016663.01 | 0.813578 | 2.384772e-51 | 1.563286e-48 |
| MsG0280010617.01 | MsG0380016663.01 | -0.803115 | 4.065448e-49 | 2.026069e-46 |
| MsG0280010825.01 | MsG0380016663.01 | -0.838276 | 3.166640e-57 | 4.219882e-54 |
| MsG0280010994.01 | MsG0380016663.01 | 0.839575 | 1.460028e-57 | 2.024644e-54 |
| MsG0380013999.01 | MsG0380016663.01 | 0.821662 | 3.583438e-53 | 2.933744e-50 |
| MsG0380014017.01 | MsG0380016663.01 | 0.807698 | 4.450664e-50 | 2.495720e-47 |
| MsG0380014864.01 | MsG0380016663.01 | 0.801703 | 7.944528e-49 | 3.819380e-46 |
| MsG0380016531.01 | MsG0380016663.01 | 0.811022 | 8.616611e-51 | 5.275942e-48 |
| MsG0380016663.01 | MsG0480023364.01 | -0.824949 | 6.115887e-54 | 5.497726e-51 |
| MsG0380016663.01 | MsG0580028107.01 | -0.836723 | 7.916664e-57 | 1.006280e-53 |
| MsG0380016663.01 | MsG0680030658.01 | 0.819570 | 1.083492e-52 | 8.368777e-50 |
| MsG0380016663.01 | MsG0680031356.01 | -0.823630 | 1.249277e-53 | 1.081567e-50 |
| MsG0380016663.01 | MsG0780040321.01 | 0.804574 | 2.023765e-49 | 1.047107e-46 |
| MsG0380016663.01 | MsG0780041121.01 | 0.825847 | 3.748638e-54 | 3.457257e-51 |
| MsG0380016663.01 | MsG0880044968.01 | 0.814377 | 1.588844e-51 | 1.064372e-48 |
| MsG0380016663.01 | MsG0880045321.01 | 0.803133 | 4.031133e-49 | 2.009894e-46 |
| MsG0280009864.01 | MsG0380016663.01 | 0.812243 | 4.676999e-51 | 2.958221e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016663.01.T01 | MTR_3g092810 | 98.707 | 232 | 3 | 0 | 1 | 232 | 62 | 293 | 2.81e-170 | 470 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380016663.01.T01 | AT5G24460 | 68.075 | 213 | 60 | 3 | 26 | 231 | 88 | 299 | 9.85e-90 | 267 |
Find 73 sgRNAs with CRISPR-Local
Find 82 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAAGAACGTTCACAATCTT+TGG | 0.212837 | 3:-86324601 | MsG0380016663.01.T01:CDS |
| AGAGTGGAGGAGAGGAATTC+AGG | 0.229370 | 3:-86324281 | MsG0380016663.01.T01:CDS |
| CCGGAATCTGCTGCTGTTAG+AGG | 0.301266 | 3:-86324389 | MsG0380016663.01.T01:CDS |
| TGCTGCTGTTAGAGGGATTA+AGG | 0.305461 | 3:-86324381 | MsG0380016663.01.T01:CDS |
| CGTTCAGGTTGTTACGGTTC+GGG | 0.323431 | 3:-86324522 | MsG0380016663.01.T01:CDS |
| GGTTGTTACGGTTCGGGTTG+TGG | 0.333708 | 3:-86324516 | MsG0380016663.01.T01:CDS |
| TTGTGAACGTTCTTCGTTCC+GGG | 0.333866 | 3:+86324608 | None:intergenic |
| TCTTTGGCTTGAACTTTCTC+AGG | 0.350434 | 3:-86324585 | MsG0380016663.01.T01:CDS |
| ATTGTGAACGTTCTTCGTTC+CGG | 0.357840 | 3:+86324607 | None:intergenic |
| CCGTTCAGGTTGTTACGGTT+CGG | 0.359505 | 3:-86324523 | MsG0380016663.01.T01:CDS |
| CCTCTAACAGCAGCAGATTC+CGG | 0.363566 | 3:+86324389 | None:intergenic |
| TTGCGACGGTTATTTCTGTT+AGG | 0.364535 | 3:+86324710 | None:intergenic |
| TGCTACAGTGGAGGGTTTGC+CGG | 0.370222 | 3:-86324213 | MsG0380016663.01.T01:CDS |
| GTTATTTCTGTTAGGGTTTG+AGG | 0.370357 | 3:+86324718 | None:intergenic |
| GGGTCTTATCCTGGTTTGCC+TGG | 0.373494 | 3:-86324260 | MsG0380016663.01.T01:CDS |
| AGCTTGGGTCTGTGATTAAC+GGG | 0.384878 | 3:-86324355 | MsG0380016663.01.T01:CDS |
| ACCTCCGGTTCGAACCGTTC+AGG | 0.390106 | 3:-86324537 | MsG0380016663.01.T01:CDS |
| GTTGTTACGGTTCGGGTTGT+GGG | 0.392998 | 3:-86324515 | MsG0380016663.01.T01:CDS |
| ACTCTCATCTCATAAGAATT+CGG | 0.424129 | 3:+86324299 | None:intergenic |
| TGATAAGAAAGTTGCACATC+AGG | 0.427025 | 3:-86324144 | MsG0380016663.01.T01:CDS |
| GAGTGGAGGAGAGGAATTCA+GGG | 0.441498 | 3:-86324280 | MsG0380016663.01.T01:CDS |
| GAGCTTGGGTCTGTGATTAA+CGG | 0.452338 | 3:-86324356 | MsG0380016663.01.T01:CDS |
| TGCGACGGTTATTTCTGTTA+GGG | 0.460191 | 3:+86324711 | None:intergenic |
| AGGAATTCAGGGTCTTATCC+TGG | 0.469785 | 3:-86324269 | MsG0380016663.01.T01:CDS |
| GCAGATTCCGGATCCTCATT+CGG | 0.471071 | 3:+86324401 | None:intergenic |
| GGAGCGGGGTAGGCCGTTGT+CGG | 0.474043 | 3:-86324435 | MsG0380016663.01.T01:CDS |
| GGAAAGTGAGGGAGCGGGGT+AGG | 0.476650 | 3:-86324445 | MsG0380016663.01.T01:CDS |
| CTTCAGATTCCTTCGCCACA+TGG | 0.478995 | 3:-86324640 | MsG0380016663.01.T01:CDS |
| GATGAAGCCGAATGAGGATC+CGG | 0.481724 | 3:-86324408 | MsG0380016663.01.T01:CDS |
| AATTCTTGTGGAATCCCATC+AGG | 0.484227 | 3:-86324480 | MsG0380016663.01.T01:CDS |
| CGCCGCAATCTCTCTCTGAA+TGG | 0.485327 | 3:-86324679 | MsG0380016663.01.T01:CDS |
| TGATGGGAAAGTGAGGGAGC+GGG | 0.486670 | 3:-86324450 | MsG0380016663.01.T01:CDS |
| AGAGGGATTAAGGAAGAGCT+TGG | 0.490718 | 3:-86324371 | MsG0380016663.01.T01:CDS |
| TCGAACCGTTCAGGTTGTTA+CGG | 0.491425 | 3:-86324528 | MsG0380016663.01.T01:CDS |
| ATGAGATGAGAGTGGAGGAG+AGG | 0.492903 | 3:-86324289 | MsG0380016663.01.T01:CDS |
| GCTTGATGATTCTGAACCTC+CGG | 0.496586 | 3:-86324552 | MsG0380016663.01.T01:CDS |
| ACAACCTGAACGGTTCGAAC+CGG | 0.503764 | 3:+86324533 | None:intergenic |
| CCCATCAGACAATTCCTGAT+GGG | 0.508953 | 3:+86324466 | None:intergenic |
| GCCACATGGGGTGTTAAGCC+CGG | 0.518471 | 3:-86324626 | MsG0380016663.01.T01:CDS |
| TTCAGATTCCTTCGCCACAT+GGG | 0.522542 | 3:-86324639 | MsG0380016663.01.T01:CDS |
| GGCTTCATCTTCTCCGACAA+CGG | 0.523703 | 3:+86324422 | None:intergenic |
| AACAGAGATTTGTGATATTG+TGG | 0.526664 | 3:-86324330 | MsG0380016663.01.T01:CDS |
| GAGGGATTAAGGAAGAGCTT+GGG | 0.532159 | 3:-86324370 | MsG0380016663.01.T01:CDS |
| TCCCATCAGGAATTGTCTGA+TGG | 0.535968 | 3:-86324467 | MsG0380016663.01.T01:CDS |
| CGGAATCTGCTGCTGTTAGA+GGG | 0.548193 | 3:-86324388 | MsG0380016663.01.T01:CDS |
| CTTTGGCTTGAACTTTCTCA+GGG | 0.549743 | 3:-86324584 | MsG0380016663.01.T01:CDS |
| ACCTGAACGGTTCGAACCGG+AGG | 0.552233 | 3:+86324536 | None:intergenic |
| TCCCATCAGACAATTCCTGA+TGG | 0.557523 | 3:+86324465 | None:intergenic |
| CCCATCAGGAATTGTCTGAT+GGG | 0.562427 | 3:-86324466 | MsG0380016663.01.T01:CDS |
| CTGATGGGAAAGTGAGGGAG+CGG | 0.566359 | 3:-86324451 | MsG0380016663.01.T01:CDS |
| TACAGTGGAGGGTTTGCCGG+AGG | 0.567653 | 3:-86324210 | MsG0380016663.01.T01:CDS |
| CTTAACACCCCATGTGGCGA+AGG | 0.570050 | 3:+86324631 | None:intergenic |
| GATGGGAAAGTGAGGGAGCG+GGG | 0.571896 | 3:-86324449 | MsG0380016663.01.T01:CDS |
| ACAGTGGAGGGTTTGCCGGA+GGG | 0.574179 | 3:-86324209 | MsG0380016663.01.T01:CDS |
| AGCCATTCAGAGAGAGATTG+CGG | 0.577556 | 3:+86324677 | None:intergenic |
| ACATAACAACCAGGCAAACC+AGG | 0.592229 | 3:+86324251 | None:intergenic |
| TCAGATTCCTTCGCCACATG+GGG | 0.592708 | 3:-86324638 | MsG0380016663.01.T01:CDS |
| GGAGAAGATGAAGCCGAATG+AGG | 0.599580 | 3:-86324414 | MsG0380016663.01.T01:CDS |
| GTTCGGGTTGTGGGAAAAGA+CGG | 0.603801 | 3:-86324506 | MsG0380016663.01.T01:CDS |
| AATTGTCTGATGGGAAAGTG+AGG | 0.612406 | 3:-86324457 | MsG0380016663.01.T01:CDS |
| GCGGCGATGCGAAATTGCGA+CGG | 0.630824 | 3:+86324696 | None:intergenic |
| GGTAGATATGTTGTTAGACA+TGG | 0.631652 | 3:+86324763 | None:intergenic |
| ATTGTCTGATGGGAAAGTGA+GGG | 0.652401 | 3:-86324456 | MsG0380016663.01.T01:CDS |
| TTCTTATGAGATGAGAGTGG+AGG | 0.652905 | 3:-86324294 | MsG0380016663.01.T01:CDS |
| AGGTTCAGAATCATCAAGCG+AGG | 0.657763 | 3:+86324556 | None:intergenic |
| GAATTCTTATGAGATGAGAG+TGG | 0.659927 | 3:-86324297 | MsG0380016663.01.T01:CDS |
| TCCGGGCTTAACACCCCATG+TGG | 0.663446 | 3:+86324625 | None:intergenic |
| CCGAACCGTAACAACCTGAA+CGG | 0.668287 | 3:+86324523 | None:intergenic |
| TGAAGATGATGATAATGATG+AGG | 0.678913 | 3:+86324742 | None:intergenic |
| ATATGCAAAACATAACAACC+AGG | 0.704010 | 3:+86324242 | None:intergenic |
| CATGTGGCGAAGGAATCTGA+AGG | 0.726001 | 3:+86324641 | None:intergenic |
| GCTTGGGTCTGTGATTAACG+GGG | 0.744662 | 3:-86324354 | MsG0380016663.01.T01:CDS |
| AAGGAATCTGAAGGTAAACG+AGG | 0.750658 | 3:+86324650 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAGAAACATTTTTGGAAAT+GGG | - | Chr3:86324735-86324754 | MsG0380016663.01.T01:CDS | 20.0% |
| !!! | TTAAGAAACATTTTTGGAAA+TGG | - | Chr3:86324734-86324753 | MsG0380016663.01.T01:CDS | 20.0% |
| !!! | TTTCTGTTAAGAAACATTTT+TGG | - | Chr3:86324728-86324747 | MsG0380016663.01.T01:CDS | 20.0% |
| AAAAGACGGAAAAATTCTTG+TGG | - | Chr3:86324354-86324373 | MsG0380016663.01.T01:CDS | 30.0% | |
| AACAGAGATTTGTGATATTG+TGG | - | Chr3:86324516-86324535 | MsG0380016663.01.T01:CDS | 30.0% | |
| ACTCTCATCTCATAAGAATT+CGG | + | Chr3:86324550-86324569 | None:intergenic | 30.0% | |
| ATATGCAAAACATAACAACC+AGG | + | Chr3:86324607-86324626 | None:intergenic | 30.0% | |
| ! | TGAAGATGATGATAATGATG+AGG | + | Chr3:86324107-86324126 | None:intergenic | 30.0% |
| GAATTCTTATGAGATGAGAG+TGG | - | Chr3:86324549-86324568 | MsG0380016663.01.T01:CDS | 35.0% | |
| TGATAAGAAAGTTGCACATC+AGG | - | Chr3:86324702-86324721 | MsG0380016663.01.T01:CDS | 35.0% | |
| ! | ATTTTGAATGCTACAGTGGA+GGG | - | Chr3:86324625-86324644 | MsG0380016663.01.T01:CDS | 35.0% |
| !! | GCATATTTTGAATGCTACAG+TGG | - | Chr3:86324621-86324640 | MsG0380016663.01.T01:CDS | 35.0% |
| !! | GTTATTTCTGTTAGGGTTTG+AGG | + | Chr3:86324131-86324150 | None:intergenic | 35.0% |
| !! | TATTTTGAATGCTACAGTGG+AGG | - | Chr3:86324624-86324643 | MsG0380016663.01.T01:CDS | 35.0% |
| AAGGAATCTGAAGGTAAACG+AGG | + | Chr3:86324199-86324218 | None:intergenic | 40.0% | |
| AATTCTTGTGGAATCCCATC+AGG | - | Chr3:86324366-86324385 | MsG0380016663.01.T01:CDS | 40.0% | |
| AATTGTCTGATGGGAAAGTG+AGG | - | Chr3:86324389-86324408 | MsG0380016663.01.T01:CDS | 40.0% | |
| ATTGTCTGATGGGAAAGTGA+GGG | - | Chr3:86324390-86324409 | MsG0380016663.01.T01:CDS | 40.0% | |
| ATTGTGAACGTTCTTCGTTC+CGG | + | Chr3:86324242-86324261 | None:intergenic | 40.0% | |
| CGAAGAACGTTCACAATCTT+TGG | - | Chr3:86324245-86324264 | MsG0380016663.01.T01:CDS | 40.0% | |
| TTCTTATGAGATGAGAGTGG+AGG | - | Chr3:86324552-86324571 | MsG0380016663.01.T01:CDS | 40.0% | |
| ! | TGATTTTTGCACGTATGAGG+TGG | - | Chr3:86324660-86324679 | MsG0380016663.01.T01:CDS | 40.0% |
| !! | CTTTGGCTTGAACTTTCTCA+GGG | - | Chr3:86324262-86324281 | MsG0380016663.01.T01:CDS | 40.0% |
| !! | TCTTTGGCTTGAACTTTCTC+AGG | - | Chr3:86324261-86324280 | MsG0380016663.01.T01:CDS | 40.0% |
| !! | TGCGACGGTTATTTCTGTTA+GGG | + | Chr3:86324138-86324157 | None:intergenic | 40.0% |
| !! | TTGCGACGGTTATTTCTGTT+AGG | + | Chr3:86324139-86324158 | None:intergenic | 40.0% |
| ACATAACAACCAGGCAAACC+AGG | + | Chr3:86324598-86324617 | None:intergenic | 45.0% | |
| AGAGGGATTAAGGAAGAGCT+TGG | - | Chr3:86324475-86324494 | MsG0380016663.01.T01:CDS | 45.0% | |
| AGCCATTCAGAGAGAGATTG+CGG | + | Chr3:86324172-86324191 | None:intergenic | 45.0% | |
| AGCTTGGGTCTGTGATTAAC+GGG | - | Chr3:86324491-86324510 | MsG0380016663.01.T01:CDS | 45.0% | |
| AGGTTCAGAATCATCAAGCG+AGG | + | Chr3:86324293-86324312 | None:intergenic | 45.0% | |
| CCCATCAGACAATTCCTGAT+GGG | + | Chr3:86324383-86324402 | None:intergenic | 45.0% | |
| CCCATCAGGAATTGTCTGAT+GGG | - | Chr3:86324380-86324399 | MsG0380016663.01.T01:CDS | 45.0% | |
| GAGCTTGGGTCTGTGATTAA+CGG | - | Chr3:86324490-86324509 | MsG0380016663.01.T01:CDS | 45.0% | |
| GAGGGATTAAGGAAGAGCTT+GGG | - | Chr3:86324476-86324495 | MsG0380016663.01.T01:CDS | 45.0% | |
| TACGTGCAAAAATCACCCTC+CGG | + | Chr3:86324655-86324674 | None:intergenic | 45.0% | |
| TCCCATCAGACAATTCCTGA+TGG | + | Chr3:86324384-86324403 | None:intergenic | 45.0% | |
| TCCCATCAGGAATTGTCTGA+TGG | - | Chr3:86324379-86324398 | MsG0380016663.01.T01:CDS | 45.0% | |
| TGCTGCTGTTAGAGGGATTA+AGG | - | Chr3:86324465-86324484 | MsG0380016663.01.T01:CDS | 45.0% | |
| TTCAGATTCCTTCGCCACAT+GGG | - | Chr3:86324207-86324226 | MsG0380016663.01.T01:CDS | 45.0% | |
| TTGTGAACGTTCTTCGTTCC+GGG | + | Chr3:86324241-86324260 | None:intergenic | 45.0% | |
| ! | AGGAATTCAGGGTCTTATCC+TGG | - | Chr3:86324577-86324596 | MsG0380016663.01.T01:CDS | 45.0% |
| ! | GCTTGATGATTCTGAACCTC+CGG | - | Chr3:86324294-86324313 | MsG0380016663.01.T01:CDS | 45.0% |
| ! | GGGTGATTTTTGCACGTATG+AGG | - | Chr3:86324657-86324676 | MsG0380016663.01.T01:CDS | 45.0% |
| !! | TCGAACCGTTCAGGTTGTTA+CGG | - | Chr3:86324318-86324337 | MsG0380016663.01.T01:CDS | 45.0% |
| ACAACCTGAACGGTTCGAAC+CGG | + | Chr3:86324316-86324335 | None:intergenic | 50.0% | |
| AGAGTGGAGGAGAGGAATTC+AGG | - | Chr3:86324565-86324584 | MsG0380016663.01.T01:CDS | 50.0% | |
| ATGAGATGAGAGTGGAGGAG+AGG | - | Chr3:86324557-86324576 | MsG0380016663.01.T01:CDS | 50.0% | |
| CATGTGGCGAAGGAATCTGA+AGG | + | Chr3:86324208-86324227 | None:intergenic | 50.0% | |
| CCGAACCGTAACAACCTGAA+CGG | + | Chr3:86324326-86324345 | None:intergenic | 50.0% | |
| CCTCTAACAGCAGCAGATTC+CGG | + | Chr3:86324460-86324479 | None:intergenic | 50.0% | |
| CGGAATCTGCTGCTGTTAGA+GGG | - | Chr3:86324458-86324477 | MsG0380016663.01.T01:CDS | 50.0% | |
| CTTCAGATTCCTTCGCCACA+TGG | - | Chr3:86324206-86324225 | MsG0380016663.01.T01:CDS | 50.0% | |
| GAGTGGAGGAGAGGAATTCA+GGG | - | Chr3:86324566-86324585 | MsG0380016663.01.T01:CDS | 50.0% | |
| GATGAAGCCGAATGAGGATC+CGG | - | Chr3:86324438-86324457 | MsG0380016663.01.T01:CDS | 50.0% | |
| GCAGATTCCGGATCCTCATT+CGG | + | Chr3:86324448-86324467 | None:intergenic | 50.0% | |
| GCTTGGGTCTGTGATTAACG+GGG | - | Chr3:86324492-86324511 | MsG0380016663.01.T01:CDS | 50.0% | |
| GGAGAAGATGAAGCCGAATG+AGG | - | Chr3:86324432-86324451 | MsG0380016663.01.T01:CDS | 50.0% | |
| GGCTTCATCTTCTCCGACAA+CGG | + | Chr3:86324427-86324446 | None:intergenic | 50.0% | |
| TCAGATTCCTTCGCCACATG+GGG | - | Chr3:86324208-86324227 | MsG0380016663.01.T01:CDS | 50.0% | |
| !! | CCGTTCAGGTTGTTACGGTT+CGG | - | Chr3:86324323-86324342 | MsG0380016663.01.T01:CDS | 50.0% |
| !! | CGTTCAGGTTGTTACGGTTC+GGG | - | Chr3:86324324-86324343 | MsG0380016663.01.T01:CDS | 50.0% |
| !! | GTTCGGGTTGTGGGAAAAGA+CGG | - | Chr3:86324340-86324359 | MsG0380016663.01.T01:CDS | 50.0% |
| !! | GTTGTTACGGTTCGGGTTGT+GGG | - | Chr3:86324331-86324350 | MsG0380016663.01.T01:CDS | 50.0% |
| CCGGAATCTGCTGCTGTTAG+AGG | - | Chr3:86324457-86324476 | MsG0380016663.01.T01:CDS | 55.0% | |
| CGCCGCAATCTCTCTCTGAA+TGG | - | Chr3:86324167-86324186 | MsG0380016663.01.T01:CDS | 55.0% | |
| CTGATGGGAAAGTGAGGGAG+CGG | - | Chr3:86324395-86324414 | MsG0380016663.01.T01:CDS | 55.0% | |
| CTTAACACCCCATGTGGCGA+AGG | + | Chr3:86324218-86324237 | None:intergenic | 55.0% | |
| TGATGGGAAAGTGAGGGAGC+GGG | - | Chr3:86324396-86324415 | MsG0380016663.01.T01:CDS | 55.0% | |
| TGCTACAGTGGAGGGTTTGC+CGG | - | Chr3:86324633-86324652 | MsG0380016663.01.T01:CDS | 55.0% | |
| ! | GGGTCTTATCCTGGTTTGCC+TGG | - | Chr3:86324586-86324605 | MsG0380016663.01.T01:CDS | 55.0% |
| !! | GGTTGTTACGGTTCGGGTTG+TGG | - | Chr3:86324330-86324349 | MsG0380016663.01.T01:CDS | 55.0% |
| ACAGTGGAGGGTTTGCCGGA+GGG | - | Chr3:86324637-86324656 | MsG0380016663.01.T01:CDS | 60.0% | |
| ACCTGAACGGTTCGAACCGG+AGG | + | Chr3:86324313-86324332 | None:intergenic | 60.0% | |
| GATGGGAAAGTGAGGGAGCG+GGG | - | Chr3:86324397-86324416 | MsG0380016663.01.T01:CDS | 60.0% | |
| GCGGCGATGCGAAATTGCGA+CGG | + | Chr3:86324153-86324172 | None:intergenic | 60.0% | |
| TACAGTGGAGGGTTTGCCGG+AGG | - | Chr3:86324636-86324655 | MsG0380016663.01.T01:CDS | 60.0% | |
| TCCGGGCTTAACACCCCATG+TGG | + | Chr3:86324224-86324243 | None:intergenic | 60.0% | |
| ! | ACCTCCGGTTCGAACCGTTC+AGG | - | Chr3:86324309-86324328 | MsG0380016663.01.T01:CDS | 60.0% |
| ! | GCCACATGGGGTGTTAAGCC+CGG | - | Chr3:86324220-86324239 | MsG0380016663.01.T01:CDS | 60.0% |
| GGAAAGTGAGGGAGCGGGGT+AGG | - | Chr3:86324401-86324420 | MsG0380016663.01.T01:CDS | 65.0% | |
| GGAGCGGGGTAGGCCGTTGT+CGG | - | Chr3:86324411-86324430 | MsG0380016663.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 86324085 | 86324783 | 86324085 | ID=MsG0380016663.01;Name=MsG0380016663.01 |
| Chr3 | mRNA | 86324085 | 86324783 | 86324085 | ID=MsG0380016663.01.T01;Parent=MsG0380016663.01;Name=MsG0380016663.01.T01;_AED=0.47;_eAED=0.47;_QI=0|-1|0|1|-1|1|1|0|232 |
| Chr3 | exon | 86324085 | 86324783 | 86324085 | ID=MsG0380016663.01.T01:exon:15808;Parent=MsG0380016663.01.T01 |
| Chr3 | CDS | 86324085 | 86324783 | 86324085 | ID=MsG0380016663.01.T01:cds;Parent=MsG0380016663.01.T01 |
| Gene Sequence |
| Protein sequence |
