AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380016841.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016841.01.T01 MTR_3g096350 99.517 207 1 0 1 207 1 207 2.13e-153 423
MsG0380016841.01.T01 MTR_8g093740 90.865 208 18 1 1 207 1 208 2.52e-139 388
MsG0380016841.01.T01 MTR_1g029450 85.572 201 28 1 8 207 13 213 2.05e-127 358
MsG0380016841.01.T01 MTR_8g093740 91.667 168 14 0 40 207 8 175 5.92e-114 322
MsG0380016841.01.T01 MTR_7g103070 69.154 201 58 3 10 207 14 213 2.81e-102 294
MsG0380016841.01.T01 MTR_1g062760 69.500 200 60 1 9 207 11 210 7.02e-102 293
MsG0380016841.01.T01 MTR_3g096350 99.231 130 1 0 1 130 1 130 2.02e-92 267
MsG0380016841.01.T01 MTR_3g096350 99.231 130 1 0 1 130 1 130 7.62e-92 265
MsG0380016841.01.T01 MTR_1g090717 63.725 204 65 3 9 207 12 211 2.23e-88 259
MsG0380016841.01.T01 MTR_7g103070 69.427 157 45 2 53 207 2 157 1.27e-81 240
MsG0380016841.01.T01 MTR_7g081700 48.259 201 99 4 8 207 4 200 1.44e-57 181
MsG0380016841.01.T01 MTR_2g005500 46.569 204 105 4 5 207 2 202 2.06e-55 175
MsG0380016841.01.T01 MTR_8g006970 52.571 175 80 3 8 181 4 176 2.09e-55 174
MsG0380016841.01.T01 MTR_8g006970 48.000 200 98 5 10 207 20 215 5.03e-55 174
MsG0380016841.01.T01 MTR_1g068740 45.455 209 100 7 8 207 11 214 9.09e-53 169
MsG0380016841.01.T01 MTR_1g068730 45.455 209 100 7 8 207 11 214 2.58e-52 167
MsG0380016841.01.T01 MTR_1g115325 45.411 207 103 7 8 207 11 214 5.02e-52 167
MsG0380016841.01.T01 MTR_7g100020 51.235 162 75 4 8 167 11 170 5.76e-51 164
MsG0380016841.01.T01 MTR_6g021790 49.405 168 82 3 9 175 3 168 8.26e-51 164
MsG0380016841.01.T01 MTR_2g096550 49.701 167 79 4 4 167 7 171 3.92e-50 162
MsG0380016841.01.T01 MTR_8g031870 44.944 178 91 4 11 187 5 176 3.37e-49 159
MsG0380016841.01.T01 MTR_2g027660 49.375 160 78 3 9 167 3 160 7.81e-49 159
MsG0380016841.01.T01 MTR_8g031660 43.069 202 108 4 11 207 5 204 2.05e-48 157
MsG0380016841.01.T01 MTR_2g090865 44.393 214 105 6 4 207 3 212 2.15e-47 155
MsG0380016841.01.T01 MTR_6g079550 46.667 180 93 3 1 179 1 178 2.84e-47 155
MsG0380016841.01.T01 MTR_2g014990 41.981 212 106 5 8 207 9 215 5.42e-47 154
MsG0380016841.01.T01 MTR_4g088090 41.509 212 107 5 8 207 9 215 7.76e-47 154
MsG0380016841.01.T01 MTR_7g051940 43.519 216 90 7 11 207 12 214 9.70e-47 153
MsG0380016841.01.T01 MTR_2g083860 48.521 169 82 4 8 174 9 174 2.21e-46 152
MsG0380016841.01.T01 MTR_8g031680 47.468 158 80 3 11 167 5 160 7.91e-46 151
MsG0380016841.01.T01 MTR_4g063160 48.780 164 78 5 8 167 11 172 8.44e-46 151
MsG0380016841.01.T01 MTR_4g079350 41.981 212 106 5 8 207 9 215 8.50e-46 151
MsG0380016841.01.T01 MTR_8g089985 39.196 199 109 4 7 204 12 199 1.08e-44 148
MsG0380016841.01.T01 MTR_8g027220 44.000 175 95 3 1 174 15 187 1.08e-44 149
MsG0380016841.01.T01 MTR_2g075950 40.476 210 112 6 8 207 9 215 1.76e-44 147
MsG0380016841.01.T01 MTR_3g086980 37.559 213 119 5 7 207 11 221 1.90e-44 147
MsG0380016841.01.T01 MTR_4g064897 37.963 216 122 7 1 207 1 213 2.00e-44 147
MsG0380016841.01.T01 MTR_8g031830 43.820 178 94 4 11 187 5 177 3.43e-44 146
MsG0380016841.01.T01 MTR_1g078200 45.029 171 91 3 10 179 12 180 5.10e-44 147
MsG0380016841.01.T01 MTR_2g005510 41.026 195 107 5 7 196 10 201 1.00e-43 145
MsG0380016841.01.T01 MTR_8g036220 44.809 183 98 3 10 191 14 194 4.87e-43 144
MsG0380016841.01.T01 MTR_3g069510 40.000 190 106 5 1 185 1 187 1.01e-42 143
MsG0380016841.01.T01 MTR_4g099470 43.636 165 89 3 43 207 16 176 3.05e-42 140
MsG0380016841.01.T01 MTR_1g068730 48.000 150 74 4 8 155 11 158 3.11e-42 140
MsG0380016841.01.T01 MTR_1g052475 37.209 215 119 7 7 207 10 222 6.69e-42 141
MsG0380016841.01.T01 MTR_1g068740 43.902 164 86 5 8 168 11 171 1.17e-41 140
MsG0380016841.01.T01 MTR_0262s0050 39.459 185 109 3 8 191 11 193 5.83e-41 139
MsG0380016841.01.T01 MTR_7g405790 43.529 170 93 3 11 179 14 181 9.52e-40 135
MsG0380016841.01.T01 MTR_8g107070 43.182 176 97 3 2 176 4 177 3.01e-39 135
MsG0380016841.01.T01 MTR_5g076590 37.436 195 114 5 14 207 12 199 4.67e-37 128
MsG0380016841.01.T01 MTR_1g094220 41.420 169 94 5 14 180 33 198 7.30e-37 127
MsG0380016841.01.T01 MTR_3g064390 36.410 195 116 5 14 207 12 199 1.31e-36 127
MsG0380016841.01.T01 MTR_7g117910 44.966 149 79 3 7 154 15 161 1.84e-36 127
MsG0380016841.01.T01 MTR_1g094220 41.250 160 90 4 14 171 33 190 5.94e-36 125
MsG0380016841.01.T01 MTR_8g103550 40.741 162 93 3 14 174 11 170 2.31e-35 124
MsG0380016841.01.T01 MTR_2g102060 40.506 158 91 3 14 170 12 167 7.23e-35 122
MsG0380016841.01.T01 MTR_4g098950 41.509 159 90 3 13 170 10 166 7.62e-35 122
MsG0380016841.01.T01 MTR_1g094220 41.401 157 88 4 14 168 33 187 1.40e-34 122
MsG0380016841.01.T01 MTR_1g094220 41.401 157 88 4 14 168 33 187 4.01e-34 121
MsG0380016841.01.T01 MTR_5g013900 35.922 206 110 5 13 206 10 205 4.81e-34 120
MsG0380016841.01.T01 MTR_8g090215 39.623 159 93 3 13 170 10 166 2.31e-33 119
MsG0380016841.01.T01 MTR_3g087160 39.053 169 100 3 13 180 10 176 2.98e-33 118
MsG0380016841.01.T01 MTR_6g087980 33.146 178 104 5 13 178 7 181 1.03e-27 104
MsG0380016841.01.T01 MTR_4g069850 34.637 179 109 5 6 177 2 179 1.73e-27 103
MsG0380016841.01.T01 MTR_2g101890 37.805 164 94 5 12 168 10 172 3.16e-27 103
MsG0380016841.01.T01 MTR_8g092020 37.714 175 99 6 1 167 1 173 8.50e-27 102
MsG0380016841.01.T01 MTR_1g097420 38.037 163 93 5 12 167 8 169 1.54e-26 101
MsG0380016841.01.T01 MTR_3g078260 30.049 203 124 6 3 193 2 198 1.78e-26 101
MsG0380016841.01.T01 MTR_4g012940 36.585 164 96 5 12 168 8 170 4.04e-26 100
MsG0380016841.01.T01 MTR_2g090875 32.000 175 104 5 13 175 7 178 1.23e-25 98.6
MsG0380016841.01.T01 MTR_4g073250 31.217 189 115 5 13 189 7 192 1.57e-25 98.6
MsG0380016841.01.T01 MTR_2g005500 32.843 204 93 4 5 207 2 162 4.47e-25 96.3
MsG0380016841.01.T01 MTR_3g064390 40.000 130 75 3 14 142 12 139 5.42e-25 95.9
MsG0380016841.01.T01 MTR_4g088055 31.176 170 102 5 14 171 8 174 5.74e-23 91.7
MsG0380016841.01.T01 MTR_3g107717 34.066 182 113 5 1 180 1 177 1.94e-22 90.9
MsG0380016841.01.T01 MTR_3g107713 34.066 182 113 5 1 180 1 177 2.07e-22 90.9
MsG0380016841.01.T01 MTR_3g107707 34.066 182 113 5 1 180 1 177 2.20e-22 90.9
MsG0380016841.01.T01 MTR_8g075240 30.857 175 106 5 13 175 7 178 2.45e-22 90.1
MsG0380016841.01.T01 MTR_5g022600 30.857 175 106 5 13 175 7 178 5.95e-22 89.4
MsG0380016841.01.T01 MTR_1g097420 35.758 165 96 6 10 167 35 196 9.05e-22 89.7
MsG0380016841.01.T01 MTR_6g039490 35.185 162 99 4 12 167 8 169 9.18e-19 81.3
MsG0380016841.01.T01 MTR_3g078260 32.824 131 81 4 3 132 2 126 5.20e-18 77.4
MsG0380016841.01.T01 MTR_8g031810 37.736 106 50 3 11 115 5 95 1.87e-16 72.0
MsG0380016841.01.T01 MTR_4g113620 30.247 162 100 4 13 174 14 162 4.22e-16 73.9
MsG0380016841.01.T01 MTR_1452s0010 43.056 72 40 1 38 109 8 78 1.94e-13 64.3
MsG0380016841.01.T01 MTR_5g078090 31.034 174 97 9 9 171 16 177 3.24e-12 62.8
MsG0380016841.01.T01 MTR_8g091980 27.976 168 81 6 14 148 23 183 8.98e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016841.01.T01 AT1G43890 84.343 198 30 1 1 197 1 198 6.66e-123 347
MsG0380016841.01.T01 AT1G43890 84.343 198 30 1 1 197 1 198 6.66e-123 347
MsG0380016841.01.T01 AT1G43890 84.343 198 30 1 1 197 1 198 6.66e-123 347
MsG0380016841.01.T01 AT5G03530 66.986 209 67 2 1 207 1 209 2.85e-105 302
MsG0380016841.01.T01 AT5G03530 66.986 209 67 2 1 207 1 209 2.85e-105 302
MsG0380016841.01.T01 AT3G09910 62.981 208 71 2 1 207 1 203 2.61e-87 256
MsG0380016841.01.T01 AT3G09910 62.981 208 71 2 1 207 1 203 2.61e-87 256
MsG0380016841.01.T01 AT3G09910 62.981 208 71 2 1 207 1 203 2.61e-87 256
MsG0380016841.01.T01 AT3G09910 65.934 182 58 2 1 178 1 182 1.15e-79 236
MsG0380016841.01.T01 AT3G09910 65.934 182 58 2 1 178 1 182 1.15e-79 236
MsG0380016841.01.T01 AT4G17530 48.756 201 98 4 8 207 4 200 3.35e-58 182
MsG0380016841.01.T01 AT5G47200 48.756 201 98 4 8 207 4 200 5.72e-58 181
MsG0380016841.01.T01 AT1G02130 47.761 201 101 4 8 207 4 201 2.92e-57 180
MsG0380016841.01.T01 AT4G35860 50.595 168 80 3 9 175 3 168 3.21e-54 172
MsG0380016841.01.T01 AT3G11730 45.545 202 106 4 8 207 4 203 3.37e-53 169
MsG0380016841.01.T01 AT5G59840 48.876 178 83 5 8 179 11 186 4.75e-52 167
MsG0380016841.01.T01 AT3G53610 51.852 162 74 4 8 167 11 170 8.73e-52 166
MsG0380016841.01.T01 AT3G53610 51.852 162 74 4 8 167 11 170 8.73e-52 166
MsG0380016841.01.T01 AT3G53610 51.852 162 74 4 8 167 11 170 8.73e-52 166
MsG0380016841.01.T01 AT3G46060 51.235 162 75 4 8 167 11 170 4.55e-51 164
MsG0380016841.01.T01 AT3G46060 51.235 162 75 4 8 167 11 170 4.55e-51 164
MsG0380016841.01.T01 AT3G46060 51.235 162 75 4 8 167 11 170 4.55e-51 164
MsG0380016841.01.T01 AT4G17160 49.701 167 81 3 9 174 3 167 6.28e-51 164
MsG0380016841.01.T01 AT5G03520 45.411 207 102 6 8 207 11 213 4.85e-50 162
MsG0380016841.01.T01 AT3G09900 46.377 207 102 6 8 207 11 215 7.35e-50 161
MsG0380016841.01.T01 AT4G17170 49.375 160 78 3 9 167 3 160 1.68e-49 160
MsG0380016841.01.T01 AT4G39990 40.670 209 111 6 10 207 15 221 1.72e-47 155
MsG0380016841.01.T01 AT1G05810 41.014 217 116 5 1 207 1 215 2.04e-47 155
MsG0380016841.01.T01 AT2G33870 41.905 210 110 4 8 207 9 216 3.87e-47 154
MsG0380016841.01.T01 AT1G05810 41.014 217 116 5 1 207 47 261 5.54e-47 155
MsG0380016841.01.T01 AT5G60860 41.981 212 106 5 8 207 9 215 1.72e-46 153
MsG0380016841.01.T01 AT5G45750 43.333 210 105 5 8 207 9 214 1.82e-46 152
MsG0380016841.01.T01 AT3G07410 46.784 171 88 3 10 179 10 178 3.15e-46 152
MsG0380016841.01.T01 AT2G43130 46.199 171 89 3 10 179 10 178 4.22e-46 152
MsG0380016841.01.T01 AT5G47520 40.187 214 106 5 10 207 12 219 6.69e-46 151
MsG0380016841.01.T01 AT4G18430 40.670 209 113 5 8 207 9 215 2.46e-45 150
MsG0380016841.01.T01 AT1G07410 38.605 215 121 6 1 207 1 212 3.52e-45 149
MsG0380016841.01.T01 AT2G31680 41.148 209 110 5 10 207 10 216 4.68e-45 149
MsG0380016841.01.T01 AT1G09630 40.566 212 111 7 7 207 7 214 4.77e-45 149
MsG0380016841.01.T01 AT1G18200 46.552 174 90 3 2 174 3 174 7.22e-45 149
MsG0380016841.01.T01 AT1G16920 41.627 209 110 6 8 207 9 214 7.38e-45 149
MsG0380016841.01.T01 AT3G15060 40.670 209 113 4 8 207 9 215 9.95e-45 148
MsG0380016841.01.T01 AT1G28550 41.905 210 110 5 8 207 9 216 1.23e-44 148
MsG0380016841.01.T01 AT1G06400 46.471 170 86 4 7 174 8 174 4.96e-44 146
MsG0380016841.01.T01 AT1G73640 46.746 169 87 3 7 174 8 174 8.42e-44 146
MsG0380016841.01.T01 AT4G18800 40.291 206 115 4 8 207 9 212 1.20e-43 145
MsG0380016841.01.T01 AT3G46830 42.614 176 96 4 1 174 1 173 1.99e-43 145
MsG0380016841.01.T01 AT3G46830 42.614 176 96 4 1 174 1 173 1.99e-43 145
MsG0380016841.01.T01 AT5G65270 40.936 171 98 3 7 176 12 180 2.48e-43 145
MsG0380016841.01.T01 AT5G59150 41.477 176 98 4 1 174 1 173 1.31e-42 143
MsG0380016841.01.T01 AT3G12160 38.208 212 118 6 7 207 10 219 1.57e-42 143
MsG0380016841.01.T01 AT5G47960 36.866 217 123 6 3 207 6 220 2.23e-42 142
MsG0380016841.01.T01 AT1G01200 41.954 174 97 4 4 175 20 191 4.32e-40 137
MsG0380016841.01.T01 AT4G35860 50.407 123 59 2 53 175 2 122 3.05e-38 130
MsG0380016841.01.T01 AT4G39890 42.767 159 89 2 13 170 10 167 3.07e-38 132
MsG0380016841.01.T01 AT5G03520 42.286 175 91 5 39 207 33 203 1.96e-37 129
MsG0380016841.01.T01 AT4G19640 35.897 195 117 5 14 207 12 199 5.31e-35 123
MsG0380016841.01.T01 AT5G10260 40.881 159 91 3 13 170 10 166 1.56e-34 122
MsG0380016841.01.T01 AT5G45130 35.897 195 117 5 14 207 12 199 3.88e-34 120
MsG0380016841.01.T01 AT2G22290 36.816 201 116 6 13 207 10 205 4.11e-34 120
MsG0380016841.01.T01 AT3G54840 40.252 159 91 4 14 170 35 191 5.03e-34 120
MsG0380016841.01.T01 AT3G54840 39.873 158 91 4 15 170 2 157 1.11e-33 118
MsG0380016841.01.T01 AT5G64990 41.026 156 89 3 13 167 8 161 2.07e-33 119
MsG0380016841.01.T01 AT2G44610 40.252 159 92 3 13 170 10 166 8.18e-33 117
MsG0380016841.01.T01 AT3G54840 40.127 157 90 4 14 168 35 189 8.21e-33 117
MsG0380016841.01.T01 AT5G45130 35.233 193 117 5 16 207 22 207 1.66e-32 117
MsG0380016841.01.T01 AT5G64990 39.264 163 89 4 13 167 8 168 1.24e-30 112
MsG0380016841.01.T01 AT3G18820 37.059 170 99 5 6 168 2 170 5.59e-28 105
MsG0380016841.01.T01 AT1G52280 35.714 196 100 6 12 200 8 184 1.19e-27 104
MsG0380016841.01.T01 AT2G44690 33.708 178 103 5 14 179 20 194 1.25e-27 104
MsG0380016841.01.T01 AT3G16100 40.244 164 90 5 12 168 8 170 1.68e-27 103
MsG0380016841.01.T01 AT1G22740 38.037 163 93 5 12 167 8 169 1.70e-27 103
MsG0380016841.01.T01 AT5G59150 39.024 123 73 2 52 174 2 122 7.09e-27 101
MsG0380016841.01.T01 AT4G28950 31.818 176 107 5 13 178 7 179 1.35e-26 101
MsG0380016841.01.T01 AT1G49300 36.095 169 100 5 6 167 2 169 2.56e-26 100
MsG0380016841.01.T01 AT1G49300 36.095 169 100 5 6 167 2 169 2.56e-26 100
MsG0380016841.01.T01 AT4G09720 38.650 163 92 5 12 167 8 169 6.75e-26 99.8
MsG0380016841.01.T01 AT4G35020 32.022 178 106 5 13 178 7 181 1.55e-25 98.6
MsG0380016841.01.T01 AT4G35020 32.022 178 106 5 13 178 7 181 1.55e-25 98.6
MsG0380016841.01.T01 AT4G35020 32.022 178 106 5 13 178 7 181 1.55e-25 98.6
MsG0380016841.01.T01 AT2G21880 38.415 164 91 6 12 167 9 170 1.72e-25 99.0
MsG0380016841.01.T01 AT4G09720 37.500 168 92 6 12 167 8 174 6.26e-25 97.4
MsG0380016841.01.T01 AT3G48040 31.667 180 107 6 13 180 9 184 6.50e-25 97.4
MsG0380016841.01.T01 AT5G39620 36.471 170 100 5 13 175 6 174 2.43e-24 95.5
MsG0380016841.01.T01 AT4G09720 35.632 174 93 6 12 167 8 180 3.58e-24 95.5
MsG0380016841.01.T01 AT3G51300 31.609 174 104 5 14 175 8 178 4.04e-24 94.7
MsG0380016841.01.T01 AT1G20090 31.609 174 104 5 14 175 7 177 4.97e-24 94.7
MsG0380016841.01.T01 AT1G75840 31.609 174 104 5 14 175 8 178 6.36e-24 94.4
MsG0380016841.01.T01 AT4G19640 39.844 128 74 3 14 140 12 137 9.35e-24 92.4
MsG0380016841.01.T01 AT2G17800 31.429 175 105 5 13 175 7 178 2.16e-23 92.8
MsG0380016841.01.T01 AT2G17800 31.429 175 105 5 13 175 7 178 2.16e-23 92.8
MsG0380016841.01.T01 AT4G19640 39.098 133 78 3 14 145 12 142 2.82e-23 92.4
MsG0380016841.01.T01 AT5G55080 35.976 164 97 6 13 174 14 171 7.24e-23 92.0
MsG0380016841.01.T01 AT5G62880 29.714 175 108 5 13 175 9 180 1.03e-22 91.7
MsG0380016841.01.T01 AT4G35950 30.857 175 106 5 13 175 7 178 1.20e-22 90.9
MsG0380016841.01.T01 AT3G48040 32.353 170 99 6 14 170 10 176 1.56e-22 90.1
MsG0380016841.01.T01 AT5G45970 30.000 170 104 5 14 171 8 174 3.69e-22 89.7
MsG0380016841.01.T01 AT5G20010 33.158 190 112 6 1 180 1 185 2.35e-21 88.2
MsG0380016841.01.T01 AT5G55190 34.091 176 109 5 1 174 1 171 4.14e-21 87.4
MsG0380016841.01.T01 AT5G20020 34.091 176 109 5 1 174 1 171 4.36e-21 87.4
MsG0380016841.01.T01 AT5G62880 30.818 159 95 5 14 160 10 165 2.14e-20 85.1
MsG0380016841.01.T01 AT4G09720 39.695 131 72 4 43 167 6 135 1.76e-19 82.0
MsG0380016841.01.T01 AT4G09720 39.695 131 72 4 43 167 6 135 1.76e-19 82.0
MsG0380016841.01.T01 AT4G09720 39.695 131 72 4 43 167 6 135 1.76e-19 82.0
MsG0380016841.01.T01 AT2G21880 39.394 132 71 5 43 167 16 145 1.06e-18 80.5
MsG0380016841.01.T01 AT2G21880 39.394 132 71 5 43 167 16 145 1.06e-18 80.5
MsG0380016841.01.T01 AT4G35020 35.345 116 71 3 14 128 8 120 3.29e-17 75.5
MsG0380016841.01.T01 AT4G35020 35.345 116 71 3 14 128 8 120 3.29e-17 75.5
MsG0380016841.01.T01 AT3G51290 28.804 184 110 6 9 175 600 779 4.88e-17 79.3
MsG0380016841.01.T01 AT2G21880 33.537 164 91 7 12 167 9 162 3.54e-16 73.9
MsG0380016841.01.T01 AT5G46025 35.577 104 66 1 73 176 6 108 3.21e-14 66.6
MsG0380016841.01.T01 AT3G49870 32.934 167 95 9 13 171 1 158 3.11e-12 62.8
MsG0380016841.01.T01 AT3G49870 32.749 171 98 9 9 171 16 177 4.80e-12 62.4
MsG0380016841.01.T01 AT5G67560 32.749 171 98 9 9 171 16 177 6.26e-12 62.4
MsG0380016841.01.T01 AT5G37680 28.736 174 101 9 9 171 16 177 1.11e-11 61.6
MsG0380016841.01.T01 AT5G09910 34.211 114 60 3 13 112 23 135 1.49e-11 62.8
MsG0380016841.01.T01 AT5G09910 34.211 114 60 3 13 112 23 135 1.49e-11 62.8
MsG0380016841.01.T01 AT5G64813 29.762 168 78 7 14 148 24 184 2.69e-11 62.0
MsG0380016841.01.T01 AT5G64813 29.762 168 78 7 14 148 24 184 2.69e-11 62.0
MsG0380016841.01.T01 AT5G64813 29.762 168 78 7 14 148 24 184 2.69e-11 62.0

Find 70 sgRNAs with CRISPR-Local

Find 405 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTAACACACGCTAGCTTAT+TGG 0.220829 3:+88499999 MsG0380016841.01.T01:three_prime_UTR
TATTTGTAATATAATGATTA+TGG 0.229099 3:+88500086 MsG0380016841.01.T01:three_prime_UTR
TATAATGTTATTATATGTTA+TGG 0.268145 3:+88500127 MsG0380016841.01.T01:three_prime_UTR
TTACAAATCTCTCAGAAGTA+TGG 0.282173 3:+88498456 MsG0380016841.01.T01:CDS
ATAGACTTTGCAAGGGAATA+TGG 0.304694 3:+88499181 MsG0380016841.01.T01:CDS
TATACACCGTTTGGACAAAA+AGG 0.333215 3:+88500166 MsG0380016841.01.T01:three_prime_UTR
AAGCTTGCCATTTGGGATAC+AGG 0.339274 3:+88495559 MsG0380016841.01.T01:CDS
AGACCTTTATTCAACAAATC+AGG 0.359452 3:+88498490 MsG0380016841.01.T01:CDS
AGGCGCTCAAGGGATCATTA+TGG 0.373713 3:+88495742 MsG0380016841.01.T01:CDS
AAAAGTTGAAGCTTGCCATT+TGG 0.375583 3:+88495551 MsG0380016841.01.T01:CDS
AAAGTTGAAGCTTGCCATTT+GGG 0.377111 3:+88495552 MsG0380016841.01.T01:CDS
AGTCCTGATTTGTTGAATAA+AGG 0.377430 3:-88498493 None:intergenic
TTTGTTCCCTTTAGAACCTT+CGG 0.385913 3:-88499831 None:intergenic
CTTTAGTTGTATACACCGTT+TGG 0.393441 3:+88500157 MsG0380016841.01.T01:three_prime_UTR
GTGTTCAAACTCTTGATGAT+TGG 0.393619 3:+88495335 MsG0380016841.01.T01:CDS
GTCAAATACGTCACTATAGA+TGG 0.393632 3:+88495526 MsG0380016841.01.T01:CDS
ACAAATATTCCAGACAAATC+AGG 0.404882 3:-88500070 None:intergenic
GACTGCATCAAGATGCTTGT+TGG 0.419380 3:+88498512 MsG0380016841.01.T01:CDS
GGCGCTCAAGGGATCATTAT+GGG 0.438439 3:+88495743 MsG0380016841.01.T01:CDS
TAGCACTGCATTCAATAAAC+AGG 0.439901 3:-88499207 None:intergenic
GACAGAGGAAGAAGAGAAGA+TGG 0.442778 3:-88495118 None:intergenic
ACCCAGGCTCCTGATTTGTC+TGG 0.442820 3:+88500061 MsG0380016841.01.T01:three_prime_UTR
CACTTGTGGATGCATCGGAC+TGG 0.443993 3:-88499877 None:intergenic
TGTTGGAAACAAAGTTGATA+AGG 0.445163 3:+88498529 MsG0380016841.01.T01:CDS
CGATGAAGATTGCAAAGAAA+AGG 0.448423 3:+88499950 MsG0380016841.01.T01:three_prime_UTR
TTCCAGACAAATCAGGAGCC+TGG 0.451354 3:-88500063 None:intergenic
TAGAGTTTAGACTGAACAAA+AGG 0.454297 3:-88500245 None:intergenic
ATTTCATCTTCTTGATTCCC+AGG 0.457965 3:+88495149 MsG0380016841.01.T01:five_prime_UTR
GGTAAGGCGACCTGGTAAAT+CGG 0.461311 3:+88495059 MsG0380016841.01.T01:five_prime_UTR
GAAAATCTCTCTCCTACAAT+CGG 0.469884 3:+88495413 MsG0380016841.01.T01:CDS
CTCCTAGCCGAAGGTTCTAA+AGG 0.474542 3:+88499824 MsG0380016841.01.T01:CDS
AATAAAAGAAAGAAAGAAAG+TGG 0.478624 3:+88495038 MsG0380016841.01.T01:five_prime_UTR
ACTTGTGGATGCATCGGACT+GGG 0.481819 3:-88499876 None:intergenic
TCCTAGCCGAAGGTTCTAAA+GGG 0.493470 3:+88499825 MsG0380016841.01.T01:CDS
ACGGTGTATACAACTAAAGT+TGG 0.500844 3:-88500153 None:intergenic
GATGGATTCGAGTACGCCTC+AGG 0.506826 3:+88495301 MsG0380016841.01.T01:exon
GAACCTTCGGCTAGGAGGCT+AGG 0.509452 3:-88499818 None:intergenic
TTCTTAGCAACAACCACTTG+TGG 0.511712 3:-88499891 None:intergenic
GTTGAGACCTGTATCCCAAA+TGG 0.515231 3:-88495566 None:intergenic
TCTTATTATCGAGGCGCTCA+AGG 0.516748 3:+88495731 MsG0380016841.01.T01:CDS
CTCTTGATGATTGGAGACTC+CGG 0.517285 3:+88495344 MsG0380016841.01.T01:CDS
GTGAGTGACTCACCGATTGT+AGG 0.518378 3:-88495425 None:intergenic
GATGAAGATTGCAAAGAAAA+GGG 0.518605 3:+88499951 MsG0380016841.01.T01:three_prime_UTR
AAGAGGGAATAGACTTTGCA+AGG 0.523660 3:+88499173 MsG0380016841.01.T01:CDS
AAGAAAGAAAGAAAGTGGTA+AGG 0.527315 3:+88495043 MsG0380016841.01.T01:five_prime_UTR
TCCAGACAAATCAGGAGCCT+GGG 0.532436 3:-88500062 None:intergenic
TACAAATCTCTCAGAAGTAT+GGG 0.533826 3:+88498457 MsG0380016841.01.T01:CDS
TTGGAATCAGTTAATTGCGA+TGG 0.534159 3:+88495283 MsG0380016841.01.T01:intron
CAGAGTTGTGACAAAGAAAG+AGG 0.553412 3:+88499156 MsG0380016841.01.T01:CDS
CTTATTATCGAGGCGCTCAA+GGG 0.555790 3:+88495732 MsG0380016841.01.T01:CDS
AAGAAAGTGGTAAGGCGACC+TGG 0.556443 3:+88495051 MsG0380016841.01.T01:five_prime_UTR
CTTTAGAACCTTCGGCTAGG+AGG 0.560394 3:-88499823 None:intergenic
AAGAAGAGAAACTTGGACAA+AGG 0.569275 3:+88500213 MsG0380016841.01.T01:three_prime_UTR
TCTCTCAGAAGTATGGGCTA+AGG 0.573779 3:+88498463 MsG0380016841.01.T01:CDS
CTTGTGGATGCATCGGACTG+GGG 0.574341 3:-88499875 None:intergenic
ATGATTGGAGACTCCGGTGT+TGG 0.589822 3:+88495350 MsG0380016841.01.T01:CDS
CAGTCCGATGCATCCACAAG+TGG 0.591910 3:+88499878 MsG0380016841.01.T01:CDS
ACAACCACTTGTGGATGCAT+CGG 0.600837 3:-88499882 None:intergenic
AGAGTTGTGACAAAGAAAGA+GGG 0.602646 3:+88499157 MsG0380016841.01.T01:CDS
TCCCTTTAGAACCTTCGGCT+AGG 0.603328 3:-88499826 None:intergenic
GCGACCTGGTAAATCGGATA+CGG 0.606271 3:+88495065 MsG0380016841.01.T01:five_prime_UTR
AAGAATCAGAGGTGAAACAG+AGG 0.609684 3:-88495388 None:intergenic
AGAGGGAATAGACTTTGCAA+GGG 0.613526 3:+88499174 MsG0380016841.01.T01:CDS
CTAACTAGTTCTTATTATCG+AGG 0.634542 3:+88495722 MsG0380016841.01.T01:CDS
ACACCTAGCCTCCTAGCCGA+AGG 0.648865 3:+88499815 MsG0380016841.01.T01:CDS
AACACGTAATCAAATTCCTG+AGG 0.656951 3:-88495317 None:intergenic
GGAACCGTATCCGATTTACC+AGG 0.659068 3:-88495069 None:intergenic
ATGAAATCATGCGTAGACAG+AGG 0.659243 3:-88495133 None:intergenic
AATCAGAGGTGAAACAGAGG+AGG 0.665273 3:-88495385 None:intergenic
GAGACTACTCTTGCCAACAC+CGG 0.676984 3:-88495363 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAAATGTAAATAATGAA+TGG + Chr3:88498939-88498958 MsG0380016841.01.T01:intron 10.0%
!! TATAATGTTATTATATGTTA+TGG + Chr3:88500127-88500146 MsG0380016841.01.T01:three_prime_UTR 10.0%
!! TATTTGTAATATAATGATTA+TGG + Chr3:88500086-88500105 MsG0380016841.01.T01:three_prime_UTR 10.0%
!!! ATTATGGTTTTATATTTATT+TGG + Chr3:88500102-88500121 MsG0380016841.01.T01:three_prime_UTR 10.0%
!! CTTATTTAAATAATAATCGA+AGG - Chr3:88498883-88498902 None:intergenic 15.0%
!! TCAATAAAGATAAGTTAAAA+AGG - Chr3:88497806-88497825 None:intergenic 15.0%
!!! AATTCAATGAAAATTTTAGT+TGG - Chr3:88498287-88498306 None:intergenic 15.0%
!!! AGAATATTATTTTTTTTCCA+AGG + Chr3:88498046-88498065 MsG0380016841.01.T01:intron 15.0%
!!! GAATATTATTTTTTTTCCAA+GGG + Chr3:88498047-88498066 MsG0380016841.01.T01:intron 15.0%
!!! GTTATAACATATGTAAATTT+TGG + Chr3:88499766-88499785 MsG0380016841.01.T01:intron 15.0%
!! AAAGATAAGTTAAAAAGGTT+GGG - Chr3:88497801-88497820 None:intergenic 20.0%
!! AAATCAAATACATAATTCTC+TGG + Chr3:88496033-88496052 MsG0380016841.01.T01:intron 20.0%
!! AATAAAAGAAAGAAAGAAAG+TGG + Chr3:88495038-88495057 MsG0380016841.01.T01:five_prime_UTR 20.0%
!! AATCAAATACATAATTCTCT+GGG + Chr3:88496034-88496053 MsG0380016841.01.T01:intron 20.0%
!! ACATTATCTTTGTATCTTAT+TGG + Chr3:88499308-88499327 MsG0380016841.01.T01:intron 20.0%
!! ATTAAGAAAAAATGGTACAT+GGG + Chr3:88499668-88499687 MsG0380016841.01.T01:intron 20.0%
!! ATTCTAAATATGATATTGAC+AGG + Chr3:88498165-88498184 MsG0380016841.01.T01:intron 20.0%
!! CAAACTTGTAAAACTATTAT+TGG - Chr3:88497537-88497556 None:intergenic 20.0%
!! CAAAGATAATGTAAGAAAAT+AGG - Chr3:88499300-88499319 None:intergenic 20.0%
!! TAAAGATAAGTTAAAAAGGT+TGG - Chr3:88497802-88497821 None:intergenic 20.0%
!! TAATGAGCAAAAAAACAAAT+GGG - Chr3:88496370-88496389 None:intergenic 20.0%
!! TGTTGTCTAATGTAAAAATA+GGG - Chr3:88497093-88497112 None:intergenic 20.0%
!! TTAATGAGCAAAAAAACAAA+TGG - Chr3:88496371-88496390 None:intergenic 20.0%
!! TTATAAAGAGCTACATAAAT+GGG - Chr3:88495851-88495870 None:intergenic 20.0%
!! TTGGAAACATTAAGAAAAAA+TGG + Chr3:88499660-88499679 MsG0380016841.01.T01:intron 20.0%
!! TTGTTGTCTAATGTAAAAAT+AGG - Chr3:88497094-88497113 None:intergenic 20.0%
!!! AATGGAATGTAAAGAAATTT+TGG - Chr3:88496099-88496118 None:intergenic 20.0%
!!! ATCACTTTTTTTTTTTTTGG+GGG + Chr3:88497558-88497577 MsG0380016841.01.T01:intron 20.0%
!!! ATGGAATGTAAAGAAATTTT+GGG - Chr3:88496098-88496117 None:intergenic 20.0%
!!! CAATAATAGTTTTACAAGTT+TGG + Chr3:88497535-88497554 MsG0380016841.01.T01:intron 20.0%
!!! GAACAAAAAGAACATTTTTA+AGG + Chr3:88499847-88499866 MsG0380016841.01.T01:CDS 20.0%
!!! GATCACTTTTTTTTTTTTTG+GGG + Chr3:88497557-88497576 MsG0380016841.01.T01:intron 20.0%
!!! GGATCACTTTTTTTTTTTTT+GGG + Chr3:88497556-88497575 MsG0380016841.01.T01:intron 20.0%
!!! TAAATTTATACTGATGATGA+GGG - Chr3:88499458-88499477 None:intergenic 20.0%
!!! TCATATTTAGAATAATAGAG+TGG - Chr3:88498158-88498177 None:intergenic 20.0%
!!! TGGATCACTTTTTTTTTTTT+TGG + Chr3:88497555-88497574 MsG0380016841.01.T01:intron 20.0%
!!! TTAAATTTATACTGATGATG+AGG - Chr3:88499459-88499478 None:intergenic 20.0%
! AAACTTGATATTGAAGAGAA+AGG - Chr3:88497283-88497302 None:intergenic 25.0%
! AAAGATTCTTGTATTTAAGG+TGG - Chr3:88496834-88496853 None:intergenic 25.0%
! AACATGTTATAAGAGTTAAG+AGG - Chr3:88499497-88499516 None:intergenic 25.0%
! AACTTGATATTGAAGAGAAA+GGG - Chr3:88497282-88497301 None:intergenic 25.0%
! AAGGAATAATATGGAAATTG+TGG - Chr3:88496741-88496760 None:intergenic 25.0%
! AAGTATATTCCATGACAAAT+GGG - Chr3:88498668-88498687 None:intergenic 25.0%
! AATCGATTGTGATGAAAAAA+TGG - Chr3:88497390-88497409 None:intergenic 25.0%
! ACTTGTAAAACTATTATTGG+AGG - Chr3:88497534-88497553 None:intergenic 25.0%
! AGAACAATGATGATTCTTAA+TGG - Chr3:88498985-88499004 None:intergenic 25.0%
! AGTTTGAAGGGATTATAAAT+AGG - Chr3:88498114-88498133 None:intergenic 25.0%
! ATCAACATGAATAATCGAAT+TGG + Chr3:88496766-88496785 MsG0380016841.01.T01:intron 25.0%
! ATCGATTGTGATGAAAAAAT+GGG - Chr3:88497389-88497408 None:intergenic 25.0%
! ATGATCAAAAAGAATGTCAA+AGG - Chr3:88497352-88497371 None:intergenic 25.0%
! ATTAAGTCCAACAATAAGTT+AGG + Chr3:88496248-88496267 MsG0380016841.01.T01:intron 25.0%
! ATTTATTAACTGAATTCACC+TGG + Chr3:88498304-88498323 MsG0380016841.01.T01:intron 25.0%
! CATTAAGAAAAAATGGTACA+TGG + Chr3:88499667-88499686 MsG0380016841.01.T01:intron 25.0%
! CCAATAAGAAACTTTAATAC+TGG - Chr3:88499416-88499435 None:intergenic 25.0%
! CCAGTATTAAAGTTTCTTAT+TGG + Chr3:88499413-88499432 MsG0380016841.01.T01:intron 25.0%
! CTATACAAAGTTACAAACAA+TGG - Chr3:88496117-88496136 None:intergenic 25.0%
! CTATTATTGAATGTCACAAA+GGG + Chr3:88498741-88498760 MsG0380016841.01.T01:intron 25.0%
! GAACAATGATGATTCTTAAT+GGG - Chr3:88498984-88499003 None:intergenic 25.0%
! GGTAAAGATTCTTGTATTTA+AGG - Chr3:88496837-88496856 None:intergenic 25.0%
! GTTATAAAGAGCTACATAAA+TGG - Chr3:88495852-88495871 None:intergenic 25.0%
! TAACGGAAAAAAAATGAATG+AGG - Chr3:88495093-88495112 None:intergenic 25.0%
! TATTAGTTCATTAAGATGCA+AGG - Chr3:88497413-88497432 None:intergenic 25.0%
! TATTATTGAATGTCACAAAG+GGG + Chr3:88498742-88498761 MsG0380016841.01.T01:intron 25.0%
! TCAAACTTAAGTATTTCCAA+CGG + Chr3:88498127-88498146 MsG0380016841.01.T01:intron 25.0%
! TCGAAACAATCATTAATGTA+TGG - Chr3:88495879-88495898 None:intergenic 25.0%
! TCTATTATTGAATGTCACAA+AGG + Chr3:88498740-88498759 MsG0380016841.01.T01:intron 25.0%
! TGATCAAAAAGAATGTCAAA+GGG - Chr3:88497351-88497370 None:intergenic 25.0%
! TGATTAATTAATTATGCAGC+TGG + Chr3:88495680-88495699 MsG0380016841.01.T01:intron 25.0%
! TGCTTTGTCCATAAAAATAA+AGG - Chr3:88498610-88498629 None:intergenic 25.0%
! TGGAAATACTTAAGTTTGAA+GGG - Chr3:88498126-88498145 None:intergenic 25.0%
! TGTCTTTCCCAATTATAAAT+AGG - Chr3:88499549-88499568 None:intergenic 25.0%
! TGTTTGTGATTCATTTGATT+CGG - Chr3:88495224-88495243 None:intergenic 25.0%
! TTCGGAAACAATATATTGAT+TGG - Chr3:88495206-88495225 None:intergenic 25.0%
! TTGGAAATACTTAAGTTTGA+AGG - Chr3:88498127-88498146 None:intergenic 25.0%
!! AAGAGAAGATGGAATTTTAA+CGG - Chr3:88495110-88495129 None:intergenic 25.0%
!! TCGGAAACAATATATTGATT+GGG - Chr3:88495205-88495224 None:intergenic 25.0%
!! TGATAAGGTATACTCTTTTT+AGG + Chr3:88498544-88498563 MsG0380016841.01.T01:intron 25.0%
!! TGTGTTATTGAAAATTATGC+TGG + Chr3:88498017-88498036 MsG0380016841.01.T01:intron 25.0%
!! TGTTTTTCTGATTTCAACAT+AGG + Chr3:88498687-88498706 MsG0380016841.01.T01:intron 25.0%
!!! AAAAAGGTGTCGTTTTTATT+TGG + Chr3:88500182-88500201 MsG0380016841.01.T01:three_prime_UTR 25.0%
!!! ATTTTATGGAGAGCTTTTTT+TGG + Chr3:88498765-88498784 MsG0380016841.01.T01:intron 25.0%
!!! TCACTTTTTTTTTTTTTGGG+GGG + Chr3:88497559-88497578 MsG0380016841.01.T01:intron 25.0%
!!! TTTTATGGAGAGCTTTTTTT+GGG + Chr3:88498766-88498785 MsG0380016841.01.T01:intron 25.0%
AAAAAGAATGTCAAAGGGAT+TGG - Chr3:88497346-88497365 None:intergenic 30.0%
AAAATACAATGGTCAAGAGA+CGG - Chr3:88497314-88497333 None:intergenic 30.0%
AACCTTGAAAATTTGAGTCT+TGG - Chr3:88496591-88496610 None:intergenic 30.0%
AAGAAACTTTAATACTGGTC+TGG - Chr3:88499411-88499430 None:intergenic 30.0%
AAGAAAGAAAGAAAGTGGTA+AGG + Chr3:88495043-88495062 MsG0380016841.01.T01:five_prime_UTR 30.0%
AAGAATGGAATTCTTCTCAA+GGG + Chr3:88497691-88497710 MsG0380016841.01.T01:intron 30.0%
AATCAAACATGCTAACATCA+TGG + Chr3:88499727-88499746 MsG0380016841.01.T01:intron 30.0%
ACAAATATTCCAGACAAATC+AGG - Chr3:88500073-88500092 None:intergenic 30.0%
ACCTAATTGCTATCATAACT+GGG + Chr3:88496438-88496457 MsG0380016841.01.T01:intron 30.0%
AGACCTTTATTCAACAAATC+AGG + Chr3:88498490-88498509 MsG0380016841.01.T01:CDS 30.0%
AGACTTACTATGATCATTTG+AGG + Chr3:88497002-88497021 MsG0380016841.01.T01:intron 30.0%
ATAATATGGAAATTGTGGCA+AGG - Chr3:88496736-88496755 None:intergenic 30.0%
ATACAAGAATCTTTACCACT+AGG + Chr3:88496840-88496859 MsG0380016841.01.T01:intron 30.0%
ATACGCCTCCTATTTATAAT+TGG + Chr3:88499538-88499557 MsG0380016841.01.T01:intron 30.0%
ATTAATGATTGTTTCGAACC+TGG + Chr3:88495882-88495901 MsG0380016841.01.T01:intron 30.0%
ATTGAAAATTATGCTGGAGA+TGG + Chr3:88498023-88498042 MsG0380016841.01.T01:intron 30.0%
ATTGATTGGGTGATAAGAAA+AGG - Chr3:88495192-88495211 None:intergenic 30.0%
ATTGTTCAAAGAGTCACAAT+GGG - Chr3:88496417-88496436 None:intergenic 30.0%
CAAGTATATTCCATGACAAA+TGG - Chr3:88498669-88498688 None:intergenic 30.0%
CGTGAAGAATGAAATGAATA+AGG - Chr3:88495457-88495476 None:intergenic 30.0%
CTGAACAGAAAATAGAGAAT+AGG + Chr3:88495966-88495985 MsG0380016841.01.T01:intron 30.0%
CTTTCCCAATTATAAATAGG+AGG - Chr3:88499546-88499565 None:intergenic 30.0%
GATGAAGATTGCAAAGAAAA+GGG + Chr3:88499951-88499970 MsG0380016841.01.T01:three_prime_UTR 30.0%
GTAAAAATAGGGATTGACAA+GGG - Chr3:88497082-88497101 None:intergenic 30.0%
TAAAAAGGTTGGGATAAGTA+AGG - Chr3:88497791-88497810 None:intergenic 30.0%
TACAATGGAAAAATCGAATG+AGG - Chr3:88497199-88497218 None:intergenic 30.0%
TACGCCTCCTATTTATAATT+GGG + Chr3:88499539-88499558 MsG0380016841.01.T01:intron 30.0%
TATTATTGGAGGAGAAATGA+AGG - Chr3:88497523-88497542 None:intergenic 30.0%
TATTGCCATTGTAACCTATT+TGG - Chr3:88496153-88496172 None:intergenic 30.0%
TCAATATATGGATACTGTGA+GGG - Chr3:88496639-88496658 None:intergenic 30.0%
TCTTTCAACAACATAAACCA+GGG - Chr3:88496189-88496208 None:intergenic 30.0%
TGATGCAACAAGGAATAATA+TGG - Chr3:88496750-88496769 None:intergenic 30.0%
TGGAAAAAAGAAGAGAAACT+TGG + Chr3:88500206-88500225 MsG0380016841.01.T01:three_prime_UTR 30.0%
TGTAAAAATAGGGATTGACA+AGG - Chr3:88497083-88497102 None:intergenic 30.0%
TGTTAGTAAGTTAGGATAGA+AGG - Chr3:88497766-88497785 None:intergenic 30.0%
TTACAAATCTCTCAGAAGTA+TGG + Chr3:88498456-88498475 MsG0380016841.01.T01:CDS 30.0%
TTATTCATGTTGATGCAACA+AGG - Chr3:88496760-88496779 None:intergenic 30.0%
TTCTTACCTATATCATGCTA+TGG + Chr3:88498208-88498227 MsG0380016841.01.T01:intron 30.0%
TTCTTTCAACAACATAAACC+AGG - Chr3:88496190-88496209 None:intergenic 30.0%
! ATGATCATTTGAGGTTTCTT+TGG + Chr3:88497011-88497030 MsG0380016841.01.T01:intron 30.0%
! ATTCTTGTATTTAAGGTGGA+TGG - Chr3:88496830-88496849 None:intergenic 30.0%
! CTAACTAGTTCTTATTATCG+AGG + Chr3:88495722-88495741 MsG0380016841.01.T01:CDS 30.0%
! GAATGTAAAGAAATTTTGGG+AGG - Chr3:88496095-88496114 None:intergenic 30.0%
! GACATTCTTTTTGATCATAG+TGG + Chr3:88497354-88497373 MsG0380016841.01.T01:intron 30.0%
! GAGATTTTCAAAAGAATCAG+AGG - Chr3:88495402-88495421 None:intergenic 30.0%
! TAATCGAATTGGCTTCTAAT+TGG + Chr3:88496777-88496796 MsG0380016841.01.T01:intron 30.0%
! TACAAATCTCTCAGAAGTAT+GGG + Chr3:88498457-88498476 MsG0380016841.01.T01:CDS 30.0%
!! AGTCCTGATTTGTTGAATAA+AGG - Chr3:88498496-88498515 None:intergenic 30.0%
!! GTAAGGTTTGTTAGTAAGTT+AGG - Chr3:88497774-88497793 None:intergenic 30.0%
!! TGTTGGAAACAAAGTTGATA+AGG + Chr3:88498529-88498548 MsG0380016841.01.T01:CDS 30.0%
!! TTCAATTTTAGTGACTTGTG+AGG + Chr3:88498830-88498849 MsG0380016841.01.T01:intron 30.0%
!!! ACTTTTTTTTTTTTTGGGGG+GGG + Chr3:88497561-88497580 MsG0380016841.01.T01:intron 30.0%
!!! CACTTTTTTTTTTTTTGGGG+GGG + Chr3:88497560-88497579 MsG0380016841.01.T01:intron 30.0%
!!! CTCTTGACCATTGTATTTTT+TGG + Chr3:88497315-88497334 MsG0380016841.01.T01:intron 30.0%
!!! GTACTTCGCCTTTATTTTTA+TGG + Chr3:88498599-88498618 MsG0380016841.01.T01:intron 30.0%
!!! TTGTGTAGGTGTTGATTTTA+AGG + Chr3:88495504-88495523 MsG0380016841.01.T01:intron 30.0%
!!! TTTTCTGGTTCCCAATAAAT+TGG - Chr3:88497958-88497977 None:intergenic 30.0%
AAAAAACAAATGGGAGGGAT+CGG - Chr3:88496361-88496380 None:intergenic 35.0%
AAAAACTGTGGAGCATACAA+TGG - Chr3:88497214-88497233 None:intergenic 35.0%
AAAAGAGAAATCCTTTGTGG+AGG - Chr3:88498078-88498097 None:intergenic 35.0%
AAAAGTTGAAGCTTGCCATT+TGG + Chr3:88495551-88495570 MsG0380016841.01.T01:CDS 35.0%
AAAATGGTACATGGGAGAAA+TGG + Chr3:88499676-88499695 MsG0380016841.01.T01:intron 35.0%
AAACTTCTGATAGAACGTTC+AGG - Chr3:88498638-88498657 None:intergenic 35.0%
AAAGAGAAATCCTTTGTGGA+GGG - Chr3:88498077-88498096 None:intergenic 35.0%
AACAAGCCATAGCATGATAT+AGG - Chr3:88498217-88498236 None:intergenic 35.0%
AACACGTAATCAAATTCCTG+AGG - Chr3:88495320-88495339 None:intergenic 35.0%
AACATTGTTAGTGTTCGTTG+TGG - Chr3:88496012-88496031 None:intergenic 35.0%
AACTTTGTATAGTCCACAAC+AGG + Chr3:88496125-88496144 MsG0380016841.01.T01:intron 35.0%
AAGAAGAGAAACTTGGACAA+AGG + Chr3:88500213-88500232 MsG0380016841.01.T01:three_prime_UTR 35.0%
AATCAACCATTGCATTGTGT+AGG + Chr3:88495490-88495509 MsG0380016841.01.T01:intron 35.0%
ACGGTGTATACAACTAAAGT+TGG - Chr3:88500156-88500175 None:intergenic 35.0%
AGAAAGATGTAACCATACAG+AGG - Chr3:88496687-88496706 None:intergenic 35.0%
AGAGTTGTGACAAAGAAAGA+GGG + Chr3:88499157-88499176 MsG0380016841.01.T01:CDS 35.0%
AGCAAACACAAGGATAGAAT+CGG - Chr3:88496873-88496892 None:intergenic 35.0%
AGGATCCAAATAGGTTACAA+TGG + Chr3:88496145-88496164 MsG0380016841.01.T01:intron 35.0%
AGGGAAGGAAACTCAATATA+TGG - Chr3:88496651-88496670 None:intergenic 35.0%
AGTCCAACAATAAGTTAGGT+TGG + Chr3:88496252-88496271 MsG0380016841.01.T01:intron 35.0%
ATAGACTTTGCAAGGGAATA+TGG + Chr3:88499181-88499200 MsG0380016841.01.T01:CDS 35.0%
ATATTCCATGACAAATGGGA+GGG - Chr3:88498664-88498683 None:intergenic 35.0%
ATGGATAATATTTGCTTCGC+AGG + Chr3:88499126-88499145 MsG0380016841.01.T01:intron 35.0%
ATGGTCCATTATTTCCATTG+TGG + Chr3:88498958-88498977 MsG0380016841.01.T01:intron 35.0%
ATTGAAGGAGGCAATGATAA+TGG - Chr3:88497883-88497902 None:intergenic 35.0%
ATTTCATCTTCTTGATTCCC+AGG + Chr3:88495149-88495168 MsG0380016841.01.T01:five_prime_UTR 35.0%
CATCTGATAGTTGTTGTGAA+AGG - Chr3:88497731-88497750 None:intergenic 35.0%
CATTGTTCAAAGAGTCACAA+TGG - Chr3:88496418-88496437 None:intergenic 35.0%
CGATGAAGATTGCAAAGAAA+AGG + Chr3:88499950-88499969 MsG0380016841.01.T01:three_prime_UTR 35.0%
CGTATCTATGGAAATTCGAA+AGG - Chr3:88499523-88499542 None:intergenic 35.0%
CTACCAACCTAACTTATTGT+TGG - Chr3:88496258-88496277 None:intergenic 35.0%
CTCAATATATGGATACTGTG+AGG - Chr3:88496640-88496659 None:intergenic 35.0%
CTCATCAGAAACAGATGATA+TGG - Chr3:88499633-88499652 None:intergenic 35.0%
CTTGGAAGTAGTATGGTTAA+AGG - Chr3:88499359-88499378 None:intergenic 35.0%
CTTTAGTTGTATACACCGTT+TGG + Chr3:88500157-88500176 MsG0380016841.01.T01:three_prime_UTR 35.0%
GAAAATCTCTCTCCTACAAT+CGG + Chr3:88495413-88495432 MsG0380016841.01.T01:CDS 35.0%
GAAACAAGGAGAAAAGAGAA+CGG - Chr3:88496711-88496730 None:intergenic 35.0%
GAAGAATGGAATTCTTCTCA+AGG + Chr3:88497690-88497709 MsG0380016841.01.T01:intron 35.0%
GACCTAATTGCTATCATAAC+TGG + Chr3:88496437-88496456 MsG0380016841.01.T01:intron 35.0%
GAGCAAAAAAACAAATGGGA+GGG - Chr3:88496366-88496385 None:intergenic 35.0%
GATTGTGATGAAAAAATGGG+AGG - Chr3:88497386-88497405 None:intergenic 35.0%
GGAACCAGAAAAAGTTGTAA+TGG + Chr3:88497966-88497985 MsG0380016841.01.T01:intron 35.0%
GGAGTGACCAAAAAATACAA+TGG - Chr3:88497325-88497344 None:intergenic 35.0%
GGCATGAGAGAAATATAGAA+AGG + Chr3:88495912-88495931 MsG0380016841.01.T01:intron 35.0%
GTAAGTGCTCTTTCATCTAA+TGG + Chr3:88498239-88498258 MsG0380016841.01.T01:intron 35.0%
GTCAAATACGTCACTATAGA+TGG + Chr3:88495526-88495545 MsG0380016841.01.T01:CDS 35.0%
GTGAAAAGAGAAATCCTTTG+TGG - Chr3:88498081-88498100 None:intergenic 35.0%
GTTTCTGATGAGACACAAAT+TGG + Chr3:88499641-88499660 MsG0380016841.01.T01:intron 35.0%
TAGCACTGCATTCAATAAAC+AGG - Chr3:88499210-88499229 None:intergenic 35.0%
TATACACCGTTTGGACAAAA+AGG + Chr3:88500166-88500185 MsG0380016841.01.T01:three_prime_UTR 35.0%
TATATTCCATGACAAATGGG+AGG - Chr3:88498665-88498684 None:intergenic 35.0%
TCAGAAACAGATGATATGGT+TGG - Chr3:88499629-88499648 None:intergenic 35.0%
TCAGCATAATGCAAATTTCC+AGG - Chr3:88498325-88498344 None:intergenic 35.0%
TCATTCCACCTAGAATTTGT+AGG + Chr3:88497040-88497059 MsG0380016841.01.T01:intron 35.0%
TGAGCAAAAAAACAAATGGG+AGG - Chr3:88496367-88496386 None:intergenic 35.0%
TGTTAAAAAGCAAAGAACCC+AGG + Chr3:88500045-88500064 MsG0380016841.01.T01:three_prime_UTR 35.0%
TGTTGTGAAAGGAATGTGAA+GGG - Chr3:88497720-88497739 None:intergenic 35.0%
TTCAACCTACAAATTCTAGG+TGG - Chr3:88497048-88497067 None:intergenic 35.0%
TTGAGAGTAAGAAGACCAAA+GGG - Chr3:88497252-88497271 None:intergenic 35.0%
TTGATATTGAAGAGAAAGGG+TGG - Chr3:88497279-88497298 None:intergenic 35.0%
TTGGAATCAGTTAATTGCGA+TGG + Chr3:88495283-88495302 MsG0380016841.01.T01:intron 35.0%
TTGTTGTGAAAGGAATGTGA+AGG - Chr3:88497721-88497740 None:intergenic 35.0%
TTTGAGAGTAAGAAGACCAA+AGG - Chr3:88497253-88497272 None:intergenic 35.0%
! AAAGTTGAAGCTTGCCATTT+GGG + Chr3:88495552-88495571 MsG0380016841.01.T01:CDS 35.0%
! AATTGGCTTCTAATTGGTTG+TGG + Chr3:88496783-88496802 MsG0380016841.01.T01:intron 35.0%
! ATAAATAGGAGGCGTATCTA+TGG - Chr3:88499535-88499554 None:intergenic 35.0%
! ATGTCACAAAGGGGATTTTA+TGG + Chr3:88498751-88498770 MsG0380016841.01.T01:intron 35.0%
! CTTTATACGTACCCAGATTT+TGG + Chr3:88499790-88499809 MsG0380016841.01.T01:intron 35.0%
! GTCCAAGACTCAAATTTTCA+AGG + Chr3:88496586-88496605 MsG0380016841.01.T01:intron 35.0%
! GTGTTCAAACTCTTGATGAT+TGG + Chr3:88495335-88495354 MsG0380016841.01.T01:CDS 35.0%
! TATGCTCCACAGTTTTTGTT+CGG + Chr3:88497217-88497236 MsG0380016841.01.T01:intron 35.0%
! TTTAACACACGCTAGCTTAT+TGG + Chr3:88499999-88500018 MsG0380016841.01.T01:three_prime_UTR 35.0%
!! AATAGCTTTGTGATTATCCC+TGG + Chr3:88496169-88496188 MsG0380016841.01.T01:intron 35.0%
!! CAACAATAAGTTAGGTTGGT+AGG + Chr3:88496256-88496275 MsG0380016841.01.T01:intron 35.0%
!! GCTTCCATTACAACTTTTTC+TGG - Chr3:88497973-88497992 None:intergenic 35.0%
!! TTTGTTCCCTTTAGAACCTT+CGG - Chr3:88499834-88499853 None:intergenic 35.0%
!!! AGGTGTCGTTTTTATTTGGA+TGG + Chr3:88500186-88500205 MsG0380016841.01.T01:three_prime_UTR 35.0%
!!! CTTTGAAGAGCTAGTTTTGA+AGG + Chr3:88499255-88499274 MsG0380016841.01.T01:CDS 35.0%
!!! CTTTTTTTTTTTTTGGGGGG+GGG + Chr3:88497562-88497581 MsG0380016841.01.T01:intron 35.0%
!!! TTTTTTTTTTTTTGGGGGGG+GGG + Chr3:88497563-88497582 MsG0380016841.01.T01:intron 35.0%
AAAATAGGGATTGACAAGGG+AGG - Chr3:88497079-88497098 None:intergenic 40.0%
AAAGAGGAGACCAACAATCA+TGG - Chr3:88497486-88497505 None:intergenic 40.0%
AACCTATTTGGATCCTGTTG+TGG - Chr3:88496141-88496160 None:intergenic 40.0%
AAGAATCAGAGGTGAAACAG+AGG - Chr3:88495391-88495410 None:intergenic 40.0%
AAGAGAAATCCTTTGTGGAG+GGG - Chr3:88498076-88498095 None:intergenic 40.0%
AAGAGGGAATAGACTTTGCA+AGG + Chr3:88499173-88499192 MsG0380016841.01.T01:CDS 40.0%
AAGTCTATGGAGTACAAGGA+GGG - Chr3:88496223-88496242 None:intergenic 40.0%
AATGAGGTGACCAATGAACA+TGG - Chr3:88497183-88497202 None:intergenic 40.0%
AGAGAATAGGTTCTCCTCAA+GGG + Chr3:88495979-88495998 MsG0380016841.01.T01:intron 40.0%
AGAGGGAATAGACTTTGCAA+GGG + Chr3:88499174-88499193 MsG0380016841.01.T01:CDS 40.0%
AGTGAACAGAAAGCGAAGAA+TGG + Chr3:88497676-88497695 MsG0380016841.01.T01:intron 40.0%
AGTGTTACCTGGATCTCTTT+GGG + Chr3:88496505-88496524 MsG0380016841.01.T01:intron 40.0%
ATCAGTGGAATTGCATACCT+GGG - Chr3:88495169-88495188 None:intergenic 40.0%
ATGAAATCATGCGTAGACAG+AGG - Chr3:88495136-88495155 None:intergenic 40.0%
ATGAGGTGACCAATGAACAT+GGG - Chr3:88497182-88497201 None:intergenic 40.0%
ATGATGAGATCCATGAGAGA+AGG - Chr3:88496295-88496314 None:intergenic 40.0%
ATGGGCCACAATGGAAATAA+TGG - Chr3:88498966-88498985 None:intergenic 40.0%
ATTGTGGCAAGGAAGAAACA+AGG - Chr3:88496725-88496744 None:intergenic 40.0%
ATTTCAACATAGGCGTGACT+TGG + Chr3:88498697-88498716 MsG0380016841.01.T01:intron 40.0%
ATTTGAGTCTTGGACAATCC+AGG - Chr3:88496581-88496600 None:intergenic 40.0%
CAAGGGTAATCCATGATTGT+TGG + Chr3:88497473-88497492 MsG0380016841.01.T01:intron 40.0%
CAGAGTTGTGACAAAGAAAG+AGG + Chr3:88499156-88499175 MsG0380016841.01.T01:CDS 40.0%
CATTCCATGCTTGACCTAAT+GGG - Chr3:88496338-88496357 None:intergenic 40.0%
CTCATCATCGACATGCATTT+GGG + Chr3:88496307-88496326 MsG0380016841.01.T01:intron 40.0%
CTGGGCATTATTGTAGCTTT+AGG + Chr3:88496052-88496071 MsG0380016841.01.T01:intron 40.0%
GAACTAATACGACGTCTTCT+TGG + Chr3:88497424-88497443 MsG0380016841.01.T01:intron 40.0%
GACTTAATCGACGAAGTCTA+TGG - Chr3:88496236-88496255 None:intergenic 40.0%
GATCATAGTAAGTCTGAGTG+TGG - Chr3:88496997-88497016 None:intergenic 40.0%
GCAAGAAAGATGGGTGATAT+AGG - Chr3:88496953-88496972 None:intergenic 40.0%
GCCCAGTTATGATAGCAATT+AGG - Chr3:88496442-88496461 None:intergenic 40.0%
GGACGTCTACAATTATCTCA+AGG + Chr3:88498565-88498584 MsG0380016841.01.T01:intron 40.0%
GGGTTCAACCTACAAATTCT+AGG - Chr3:88497051-88497070 None:intergenic 40.0%
GGTGATAAGAAAAGGATCAG+TGG - Chr3:88495184-88495203 None:intergenic 40.0%
GTGATGAAAAAATGGGAGGT+AGG - Chr3:88497382-88497401 None:intergenic 40.0%
GTTGTGAAAGGAATGTGAAG+GGG - Chr3:88497719-88497738 None:intergenic 40.0%
TAGAGAATAGGTTCTCCTCA+AGG + Chr3:88495978-88495997 MsG0380016841.01.T01:intron 40.0%
TAGAGGAGTTGACATGCAAA+TGG + Chr3:88499107-88499126 MsG0380016841.01.T01:intron 40.0%
TATTCCATGACAAATGGGAG+GGG - Chr3:88498663-88498682 None:intergenic 40.0%
TCAACACCTACACAATGCAA+TGG - Chr3:88495499-88495518 None:intergenic 40.0%
TCGTAACCGAACAAAAACTG+TGG - Chr3:88497226-88497245 None:intergenic 40.0%
TCTCATCATCGACATGCATT+TGG + Chr3:88496306-88496325 MsG0380016841.01.T01:intron 40.0%
TCTTTCATCTAATGGAGCTG+TGG + Chr3:88498247-88498266 MsG0380016841.01.T01:intron 40.0%
TGTTTCGAACCTGGAGAAAT+TGG + Chr3:88495891-88495910 MsG0380016841.01.T01:intron 40.0%
TTACTAGACTCAGTGTTACC+TGG + Chr3:88496494-88496513 MsG0380016841.01.T01:intron 40.0%
TTCTCAATAGATGAAGCCAC+AGG - Chr3:88496900-88496919 None:intergenic 40.0%
TTCTTAGCAACAACCACTTG+TGG - Chr3:88499894-88499913 None:intergenic 40.0%
TTGTTAGTGTTCGTTGTGGA+CGG - Chr3:88496008-88496027 None:intergenic 40.0%
TTTCAACATAGGCGTGACTT+GGG + Chr3:88498698-88498717 MsG0380016841.01.T01:intron 40.0%
! ACGACACCTTTTTGTCCAAA+CGG - Chr3:88500175-88500194 None:intergenic 40.0%
! TGATTCTTAATGGGCCACAA+TGG - Chr3:88498975-88498994 None:intergenic 40.0%
! TTTTACCTCTCACCTCTGTA+TGG + Chr3:88496672-88496691 MsG0380016841.01.T01:intron 40.0%
!!! TTTTTTTTTTTTGGGGGGGG+GGG + Chr3:88497564-88497583 MsG0380016841.01.T01:intron 40.0%
AATCAGAGGTGAAACAGAGG+AGG - Chr3:88495388-88495407 None:intergenic 45.0%
AATGTGTCAGTGTGTCTGCT+TGG - Chr3:88499377-88499396 None:intergenic 45.0%
ACAACCACTTGTGGATGCAT+CGG - Chr3:88499885-88499904 None:intergenic 45.0%
ACAGAGGTGAGAGGTAAAAC+AGG - Chr3:88496671-88496690 None:intergenic 45.0%
ACTGCCTCCACTAGAACTAT+CGG - Chr3:88496551-88496570 None:intergenic 45.0%
AGGGTGTGGTATGAGAAAAG+AGG - Chr3:88496620-88496639 None:intergenic 45.0%
ATATGGATACTGTGAGGGTG+TGG - Chr3:88496634-88496653 None:intergenic 45.0%
ATGTTAGACTCCGACAGACA+TGG + Chr3:88497850-88497869 MsG0380016841.01.T01:intron 45.0%
CACAGGAACAAGCAAACACA+AGG - Chr3:88496883-88496902 None:intergenic 45.0%
CAGAGGTGAGAGGTAAAACA+GGG - Chr3:88496670-88496689 None:intergenic 45.0%
CAGTGTTACCTGGATCTCTT+TGG + Chr3:88496504-88496523 MsG0380016841.01.T01:intron 45.0%
CATCGACATGCATTTGGGTA+TGG + Chr3:88496312-88496331 MsG0380016841.01.T01:intron 45.0%
CCATCTTTCTTGCCCATGAA+CGG + Chr3:88496960-88496979 MsG0380016841.01.T01:intron 45.0%
CGTTCATGGGCAAGAAAGAT+GGG - Chr3:88496962-88496981 None:intergenic 45.0%
CTTGGGAGGAAATCTATGTG+TGG + Chr3:88498715-88498734 MsG0380016841.01.T01:intron 45.0%
CTTGTGTTTGCTTGTTCCTG+TGG + Chr3:88496881-88496900 MsG0380016841.01.T01:intron 45.0%
GAAGTCTATGGAGTACAAGG+AGG - Chr3:88496224-88496243 None:intergenic 45.0%
GACAGAGGAAGAAGAGAAGA+TGG - Chr3:88495121-88495140 None:intergenic 45.0%
GACGAAGTCTATGGAGTACA+AGG - Chr3:88496227-88496246 None:intergenic 45.0%
GACTGCATCAAGATGCTTGT+TGG + Chr3:88498512-88498531 MsG0380016841.01.T01:CDS 45.0%
GATCAGTGGAATTGCATACC+TGG - Chr3:88495170-88495189 None:intergenic 45.0%
GATGATATGGTTGGCGTGTT+TGG - Chr3:88499620-88499639 None:intergenic 45.0%
GATTGACAAGGGAGGATGAT+GGG - Chr3:88497071-88497090 None:intergenic 45.0%
GCAGGTCGGACCAATTTATT+GGG + Chr3:88497945-88497964 MsG0380016841.01.T01:intron 45.0%
GCATTCCATGCTTGACCTAA+TGG - Chr3:88496339-88496358 None:intergenic 45.0%
GCTAGGTGTGTCCAAAATCT+GGG - Chr3:88499804-88499823 None:intergenic 45.0%
GCTGACTGTCTGTGGAATTT+AGG + Chr3:88498340-88498359 MsG0380016841.01.T01:intron 45.0%
GTCCACAACAGGATCCAAAT+AGG + Chr3:88496136-88496155 MsG0380016841.01.T01:intron 45.0%
GTGTCTGCTTGGAAGTAGTA+TGG - Chr3:88499366-88499385 None:intergenic 45.0%
GTTCGGTTACGAATTCCCTT+TGG + Chr3:88497234-88497253 MsG0380016841.01.T01:intron 45.0%
GTTGAGACCTGTATCCCAAA+TGG - Chr3:88495569-88495588 None:intergenic 45.0%
TAGCATCTTGTAGCTTCGAC+AGG + Chr3:88496462-88496481 MsG0380016841.01.T01:intron 45.0%
TCGTAAGCTGCAGCAGTTTA+AGG - Chr3:88498416-88498435 None:intergenic 45.0%
TCTCTCATGCATCCAACTAG+AGG + Chr3:88499090-88499109 MsG0380016841.01.T01:intron 45.0%
TCTCTCATGCCAATTTCTCC+AGG - Chr3:88495903-88495922 None:intergenic 45.0%
TGAGAACCTTTCAGTGACAC+AGG + Chr3:88496914-88496933 MsG0380016841.01.T01:intron 45.0%
TGCATGTCAACTCCTCTAGT+TGG - Chr3:88499105-88499124 None:intergenic 45.0%
TGTAACCATACAGAGGTGAG+AGG - Chr3:88496680-88496699 None:intergenic 45.0%
TGTGAGGAAGTCTCTGTAGT+TGG + Chr3:88498846-88498865 MsG0380016841.01.T01:intron 45.0%
TTCATCTAATGGAGCTGTGG+CGG + Chr3:88498250-88498269 MsG0380016841.01.T01:intron 45.0%
TTTGGCTGAGGGAGAAATGA+AGG - Chr3:88497919-88497938 None:intergenic 45.0%
! AAGCTTGCCATTTGGGATAC+AGG + Chr3:88495559-88495578 MsG0380016841.01.T01:CDS 45.0%
! CTCTTGATGATTGGAGACTC+CGG + Chr3:88495344-88495363 MsG0380016841.01.T01:CDS 45.0%
! CTTATTATCGAGGCGCTCAA+GGG + Chr3:88495732-88495751 MsG0380016841.01.T01:CDS 45.0%
! GGTCACAGTGTCATTGAAAG+AGG - Chr3:88497502-88497521 None:intergenic 45.0%
! GTATTTAAGGTGGATGGCGA+TGG - Chr3:88496824-88496843 None:intergenic 45.0%
! TCTCTCAGAAGTATGGGCTA+AGG + Chr3:88498463-88498482 MsG0380016841.01.T01:CDS 45.0%
! TCTTATTATCGAGGCGCTCA+AGG + Chr3:88495731-88495750 MsG0380016841.01.T01:CDS 45.0%
! TGCATTATGCTGACTGTCTG+TGG + Chr3:88498332-88498351 MsG0380016841.01.T01:intron 45.0%
! TGCTGGTTATCCTTCTCTCA+TGG + Chr3:88496282-88496301 MsG0380016841.01.T01:intron 45.0%
!! ATAGTTCTAGTGGAGGCAGT+GGG + Chr3:88496551-88496570 MsG0380016841.01.T01:intron 45.0%
!! TCAACTCCCGATAGTTCTAG+TGG + Chr3:88496541-88496560 MsG0380016841.01.T01:intron 45.0%
!! TCCTAGCCGAAGGTTCTAAA+GGG + Chr3:88499825-88499844 MsG0380016841.01.T01:CDS 45.0%
!!! TTTTTTTTTTTGGGGGGGGG+GGG + Chr3:88497565-88497584 MsG0380016841.01.T01:intron 45.0%
!!! ATATATAATTTATTTTTTGT+TGG + Chr3:88495264-88495283 MsG0380016841.01.T01:intron 5.0%
AAGAAAGTGGTAAGGCGACC+TGG + Chr3:88495051-88495070 MsG0380016841.01.T01:five_prime_UTR 50.0%
ACTTGTGGATGCATCGGACT+GGG - Chr3:88499879-88499898 None:intergenic 50.0%
AGAATCGGAGCTCTACCTAG+TGG - Chr3:88496858-88496877 None:intergenic 50.0%
AGCCTGAGACCCATGTTCAT+TGG + Chr3:88497170-88497189 MsG0380016841.01.T01:intron 50.0%
AGGCGCTCAAGGGATCATTA+TGG + Chr3:88495742-88495761 MsG0380016841.01.T01:CDS 50.0%
ATGATTGGAGACTCCGGTGT+TGG + Chr3:88495350-88495369 MsG0380016841.01.T01:CDS 50.0%
ATGCCAGACTTCAGTGCACA+AGG + Chr3:88497455-88497474 MsG0380016841.01.T01:intron 50.0%
ATGGCCCATTAGGTCAAGCA+TGG + Chr3:88496331-88496350 MsG0380016841.01.T01:intron 50.0%
CCGTTCATGGGCAAGAAAGA+TGG - Chr3:88496963-88496982 None:intergenic 50.0%
CTGCCTCCACTAGAACTATC+GGG - Chr3:88496550-88496569 None:intergenic 50.0%
CTTTCAGTGACACAGGCTGA+TGG + Chr3:88496921-88496940 MsG0380016841.01.T01:intron 50.0%
GACCAATGAACATGGGTCTC+AGG - Chr3:88497175-88497194 None:intergenic 50.0%
GAGACTACTCTTGCCAACAC+CGG - Chr3:88495366-88495385 None:intergenic 50.0%
GCATTTGGGTATGGCCCATT+AGG + Chr3:88496321-88496340 MsG0380016841.01.T01:intron 50.0%
GCGACCTGGTAAATCGGATA+CGG + Chr3:88495065-88495084 MsG0380016841.01.T01:five_prime_UTR 50.0%
GGAACCGTATCCGATTTACC+AGG - Chr3:88495072-88495091 None:intergenic 50.0%
GGATTGACAAGGGAGGATGA+TGG - Chr3:88497072-88497091 None:intergenic 50.0%
GGCAGGTCGGACCAATTTAT+TGG + Chr3:88497944-88497963 MsG0380016841.01.T01:intron 50.0%
GGCGCTCAAGGGATCATTAT+GGG + Chr3:88495743-88495762 MsG0380016841.01.T01:CDS 50.0%
GGCTAGGTGTGTCCAAAATC+TGG - Chr3:88499805-88499824 None:intergenic 50.0%
GGTAAGGCGACCTGGTAAAT+CGG + Chr3:88495059-88495078 MsG0380016841.01.T01:five_prime_UTR 50.0%
GGTGAGAGGTAAAACAGGGA+AGG - Chr3:88496666-88496685 None:intergenic 50.0%
TAATAGAGTGGAGTCGCCGT+TGG - Chr3:88498146-88498165 None:intergenic 50.0%
TACAGTGCCCAAAGAGATCC+AGG - Chr3:88496515-88496534 None:intergenic 50.0%
TACCCTTGTGCACTGAAGTC+TGG - Chr3:88497461-88497480 None:intergenic 50.0%
TCCAGACAAATCAGGAGCCT+GGG - Chr3:88500065-88500084 None:intergenic 50.0%
TGCCAGACTTCAGTGCACAA+GGG + Chr3:88497456-88497475 MsG0380016841.01.T01:intron 50.0%
TGGAGTACAAGGAGGGAAGA+CGG - Chr3:88496216-88496235 None:intergenic 50.0%
TGGATTGCAGCCATGTCTGT+CGG - Chr3:88497863-88497882 None:intergenic 50.0%
TTCCAGACAAATCAGGAGCC+TGG - Chr3:88500066-88500085 None:intergenic 50.0%
TTCTCCCCTCCCATTTGTCA+TGG + Chr3:88498656-88498675 MsG0380016841.01.T01:intron 50.0%
TTCTCCCTCAGCCAAAGATC+TGG + Chr3:88497923-88497942 MsG0380016841.01.T01:intron 50.0%
TTGGAGATCAAGGCGAGACT+CGG - Chr3:88497144-88497163 None:intergenic 50.0%
! CATCAGCCTGTGTCACTGAA+AGG - Chr3:88496923-88496942 None:intergenic 50.0%
! CTCCTAGCCGAAGGTTCTAA+AGG + Chr3:88499824-88499843 MsG0380016841.01.T01:CDS 50.0%
! GTGAGTGACTCACCGATTGT+AGG - Chr3:88495428-88495447 None:intergenic 50.0%
! TTTAAGGTGGATGGCGATGG+TGG - Chr3:88496821-88496840 None:intergenic 50.0%
!! ACTCCCGATAGTTCTAGTGG+AGG + Chr3:88496544-88496563 MsG0380016841.01.T01:intron 50.0%
!! CTTTAGAACCTTCGGCTAGG+AGG - Chr3:88499826-88499845 None:intergenic 50.0%
!! GATAGTTCTAGTGGAGGCAG+TGG + Chr3:88496550-88496569 MsG0380016841.01.T01:intron 50.0%
!! TCCCTTTAGAACCTTCGGCT+AGG - Chr3:88499829-88499848 None:intergenic 50.0%
!!! TTTTTTTTTTGGGGGGGGGG+GGG + Chr3:88497566-88497585 MsG0380016841.01.T01:intron 50.0%
AAAGTCCCCACAGCTGCTGT+AGG + Chr3:88499588-88499607 MsG0380016841.01.T01:intron 55.0%
AAGTCCCCACAGCTGCTGTA+GGG + Chr3:88499589-88499608 MsG0380016841.01.T01:intron 55.0%
ACCTGCCAGATCTTTGGCTG+AGG - Chr3:88497931-88497950 None:intergenic 55.0%
AGTGACACAGGCTGATGGAG+TGG + Chr3:88496926-88496945 MsG0380016841.01.T01:intron 55.0%
ATACCCCCTACAGCAGCTGT+GGG - Chr3:88499597-88499616 None:intergenic 55.0%
CAAGGGTTTCCCCTCCACAA+AGG + Chr3:88498064-88498083 MsG0380016841.01.T01:intron 55.0%
CACTTGTGGATGCATCGGAC+TGG - Chr3:88499880-88499899 None:intergenic 55.0%
CAGCCAAAGATCTGGCAGGT+CGG + Chr3:88497931-88497950 MsG0380016841.01.T01:intron 55.0%
CAGTCCGATGCATCCACAAG+TGG + Chr3:88499878-88499897 MsG0380016841.01.T01:CDS 55.0%
CCTGCCAGATCTTTGGCTGA+GGG - Chr3:88497930-88497949 None:intergenic 55.0%
CTTGTGGATGCATCGGACTG+GGG - Chr3:88499878-88499897 None:intergenic 55.0%
CTTTGTGGAGGGGAAACCCT+TGG - Chr3:88498066-88498085 None:intergenic 55.0%
GCAGCGACAAGACCGTTCAT+GGG - Chr3:88496975-88496994 None:intergenic 55.0%
GGCTCAGCTGTTGGAGATCA+AGG - Chr3:88497154-88497173 None:intergenic 55.0%
GGCTGAGGGAGAAATGAAGG+TGG - Chr3:88497916-88497935 None:intergenic 55.0%
GTTGTGGACGGAAACCCTTG+AGG - Chr3:88495996-88496015 None:intergenic 55.0%
! ACCCAGGCTCCTGATTTGTC+TGG + Chr3:88500061-88500080 MsG0380016841.01.T01:three_prime_UTR 55.0%
! CAACATAGGCGTGACTTGGG+AGG + Chr3:88498701-88498720 MsG0380016841.01.T01:intron 55.0%
! GATGGATTCGAGTACGCCTC+AGG + Chr3:88495301-88495320 MsG0380016841.01.T01:exon 55.0%
! GGCAGCTGTGTCATTGAAGG+AGG - Chr3:88497895-88497914 None:intergenic 55.0%
! GGTGGCAGCTGTGTCATTGA+AGG - Chr3:88497898-88497917 None:intergenic 55.0%
!! GTTAGGTTGGTAGGCGTTGC+TGG + Chr3:88496265-88496284 MsG0380016841.01.T01:intron 55.0%
!!! TTTTTTTTTGGGGGGGGGGG+GGG + Chr3:88497567-88497586 MsG0380016841.01.T01:intron 55.0%
ACACCTAGCCTCCTAGCCGA+AGG + Chr3:88499815-88499834 MsG0380016841.01.T01:CDS 60.0%
AGTCCCCACAGCTGCTGTAG+GGG + Chr3:88499590-88499609 MsG0380016841.01.T01:intron 60.0%
CCCTCAGCCAAAGATCTGGC+AGG + Chr3:88497927-88497946 MsG0380016841.01.T01:intron 60.0%
GAACCTTCGGCTAGGAGGCT+AGG - Chr3:88499821-88499840 None:intergenic 60.0%
GATACCCCCTACAGCAGCTG+TGG - Chr3:88499598-88499617 None:intergenic 60.0%
GGCAGCGACAAGACCGTTCA+TGG - Chr3:88496976-88496995 None:intergenic 60.0%
GGTCCGACCTGCCAGATCTT+TGG - Chr3:88497937-88497956 None:intergenic 60.0%
TACCCCCTACAGCAGCTGTG+GGG - Chr3:88499596-88499615 None:intergenic 60.0%
TGGGTCTCAGGCTCAGCTGT+TGG - Chr3:88497163-88497182 None:intergenic 60.0%
! GTGGAGGCAGTGGGTTTACC+TGG + Chr3:88496560-88496579 MsG0380016841.01.T01:intron 60.0%
!! GTGGATGGCGATGGTGGAGA+AGG - Chr3:88496815-88496834 None:intergenic 60.0%
!!! TTTTTTTTGGGGGGGGGGGG+GGG + Chr3:88497568-88497587 MsG0380016841.01.T01:intron 60.0%
GTCCCCACAGCTGCTGTAGG+GGG + Chr3:88499591-88499610 MsG0380016841.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 88495011 88500264 88495011 ID=MsG0380016841.01;Name=MsG0380016841.01
Chr3 mRNA 88495011 88500264 88495011 ID=MsG0380016841.01.T01;Parent=MsG0380016841.01;Name=MsG0380016841.01.T01;_AED=0.44;_eAED=0.44;_QI=169|1|1|1|0.83|0.85|7|354|207
Chr3 exon 88495011 88495170 88495011 ID=MsG0380016841.01.T01:exon:24974;Parent=MsG0380016841.01.T01
Chr3 exon 88495293 88495434 88495293 ID=MsG0380016841.01.T01:exon:24975;Parent=MsG0380016841.01.T01
Chr3 exon 88495512 88495580 88495512 ID=MsG0380016841.01.T01:exon:24976;Parent=MsG0380016841.01.T01
Chr3 exon 88495699 88495764 88495699 ID=MsG0380016841.01.T01:exon:24977;Parent=MsG0380016841.01.T01
Chr3 exon 88498429 88498550 88498429 ID=MsG0380016841.01.T01:exon:24978;Parent=MsG0380016841.01.T01
Chr3 exon 88499148 88499276 88499148 ID=MsG0380016841.01.T01:exon:24979;Parent=MsG0380016841.01.T01
Chr3 exon 88499806 88500264 88499806 ID=MsG0380016841.01.T01:exon:24980;Parent=MsG0380016841.01.T01
Chr3 five_prime_UTR 88495011 88495170 88495011 ID=MsG0380016841.01.T01:five_prime_utr;Parent=MsG0380016841.01.T01
Chr3 five_prime_UTR 88495293 88495301 88495293 ID=MsG0380016841.01.T01:five_prime_utr;Parent=MsG0380016841.01.T01
Chr3 CDS 88495302 88495434 88495302 ID=MsG0380016841.01.T01:cds;Parent=MsG0380016841.01.T01
Chr3 CDS 88495512 88495580 88495512 ID=MsG0380016841.01.T01:cds;Parent=MsG0380016841.01.T01
Chr3 CDS 88495699 88495764 88495699 ID=MsG0380016841.01.T01:cds;Parent=MsG0380016841.01.T01
Chr3 CDS 88498429 88498550 88498429 ID=MsG0380016841.01.T01:cds;Parent=MsG0380016841.01.T01
Chr3 CDS 88499148 88499276 88499148 ID=MsG0380016841.01.T01:cds;Parent=MsG0380016841.01.T01
Chr3 CDS 88499806 88499910 88499806 ID=MsG0380016841.01.T01:cds;Parent=MsG0380016841.01.T01
Chr3 three_prime_UTR 88499911 88500264 88499911 ID=MsG0380016841.01.T01:three_prime_utr;Parent=MsG0380016841.01.T01
Gene Sequence

>MsG0380016841.01.T01

ATGGATTCGAGTACGCCTCAGGAATTTGATTACGTGTTCAAACTCTTGATGATTGGAGACTCCGGTGTTGGCAAGAGTAGTCTCCTCCTCTGTTTCACCTCTGATTCTTTTGAAAATCTCTCTCCTACAATCGGTGTTGATTTTAAGGTCAAATACGTCACTATAGATGGTAAAAAGTTGAAGCTTGCCATTTGGGATACAGCTGGTCAAGAGAGATTCAGAACACTAACTAGTTCTTATTATCGAGGCGCTCAAGGGATCATTATGGCTTACGATGTTACTCGACGAGATACATTTACAAATCTCTCAGAAGTATGGGCTAAGGAAGTAGACCTTTATTCAACAAATCAGGACTGCATCAAGATGCTTGTTGGAAACAAAGTTGATAAGGAGAGTGACAGAGTTGTGACAAAGAAAGAGGGAATAGACTTTGCAAGGGAATATGGTTGCCTGTTTATTGAATGCAGTGCTAAGACTCGAGTTAATGTACAACATTGCTTTGAAGAGCTAGTTTTGAAGATTTTGGACACACCTAGCCTCCTAGCCGAAGGTTCTAAAGGGAACAAAAAGAACATTTTTAAGGACAAGCCCCAGTCCGATGCATCCACAAGTGGTTGTTGCTAA
Protein sequence

>MsG0380016841.01.T01

MDSSTPQEFDYVFKLLMIGDSGVGKSSLLLCFTSDSFENLSPTIGVDFKVKYVTIDGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMAYDVTRRDTFTNLSEVWAKEVDLYSTNQDCIKMLVGNKVDKESDRVVTKKEGIDFAREYGCLFIECSAKTRVNVQHCFEELVLKILDTPSLLAEGSKGNKKNIFKDKPQSDASTSGCC*