AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680031375.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031375.01.T01 MTR_6g021790 82.422 256 0 1 1 256 1 211 3.01e-151 420
MsG0680031375.01.T01 MTR_2g027660 73.047 256 24 1 1 256 1 211 6.50e-131 369
MsG0680031375.01.T01 MTR_8g031660 68.508 181 57 0 1 181 1 181 1.13e-93 274
MsG0680031375.01.T01 MTR_8g031680 54.688 256 70 2 1 256 1 210 2.85e-91 268
MsG0680031375.01.T01 MTR_8g031870 73.653 167 44 0 1 167 1 167 6.97e-91 266
MsG0680031375.01.T01 MTR_8g031830 70.807 161 47 0 1 161 1 161 1.57e-81 243
MsG0680031375.01.T01 MTR_2g083860 55.689 167 74 0 3 169 10 176 5.13e-63 197
MsG0680031375.01.T01 MTR_2g005510 51.955 179 86 0 3 181 12 190 2.34e-61 192
MsG0680031375.01.T01 MTR_2g075950 53.892 167 77 0 3 169 10 176 4.67e-61 192
MsG0680031375.01.T01 MTR_0262s0050 52.410 166 79 0 4 169 13 178 1.45e-60 191
MsG0680031375.01.T01 MTR_7g081700 53.939 165 76 0 3 167 5 169 3.33e-60 189
MsG0680031375.01.T01 MTR_1g052475 48.315 178 92 0 4 181 13 190 1.37e-59 188
MsG0680031375.01.T01 MTR_4g064897 54.430 158 72 0 3 160 9 166 1.58e-59 188
MsG0680031375.01.T01 MTR_2g014990 48.066 181 94 0 3 183 10 190 3.75e-59 187
MsG0680031375.01.T01 MTR_8g006970 53.939 165 76 0 3 167 5 169 4.47e-59 186
MsG0680031375.01.T01 MTR_8g089985 51.220 164 80 0 4 167 15 178 6.09e-59 187
MsG0680031375.01.T01 MTR_3g086980 51.515 165 80 0 4 168 14 178 1.01e-58 186
MsG0680031375.01.T01 MTR_1g115325 51.149 174 84 1 3 175 12 185 3.52e-58 184
MsG0680031375.01.T01 MTR_4g088090 47.486 179 94 0 3 181 10 188 3.87e-58 184
MsG0680031375.01.T01 MTR_3g069510 53.797 158 73 0 3 160 9 166 1.44e-57 183
MsG0680031375.01.T01 MTR_7g100020 51.163 172 83 1 3 173 12 183 1.68e-57 182
MsG0680031375.01.T01 MTR_8g006970 53.659 164 76 0 4 167 20 183 2.10e-57 182
MsG0680031375.01.T01 MTR_4g079350 46.927 179 95 0 3 181 10 188 3.01e-57 182
MsG0680031375.01.T01 MTR_1g068740 51.176 170 82 1 3 171 12 181 3.43e-57 182
MsG0680031375.01.T01 MTR_7g405790 47.368 190 97 1 5 194 14 200 4.66e-57 182
MsG0680031375.01.T01 MTR_2g005500 50.909 165 81 0 3 167 6 170 1.03e-56 180
MsG0680031375.01.T01 MTR_1g068730 50.588 170 83 1 3 171 12 181 1.17e-56 181
MsG0680031375.01.T01 MTR_6g079550 54.878 164 74 0 4 167 10 173 1.18e-56 181
MsG0680031375.01.T01 MTR_8g036220 51.220 164 80 0 4 167 14 177 1.08e-55 178
MsG0680031375.01.T01 MTR_2g090865 48.315 178 92 0 3 180 8 185 2.87e-55 177
MsG0680031375.01.T01 MTR_8g027220 50.610 164 81 0 4 167 24 187 7.89e-55 176
MsG0680031375.01.T01 MTR_7g051940 47.340 188 96 1 5 192 12 196 2.83e-54 174
MsG0680031375.01.T01 MTR_4g063160 48.851 174 86 2 3 173 12 185 4.42e-53 171
MsG0680031375.01.T01 MTR_1g078200 50.000 168 83 1 4 171 12 178 4.52e-53 172
MsG0680031375.01.T01 MTR_7g103070 51.462 171 77 4 3 169 13 181 2.12e-51 167
MsG0680031375.01.T01 MTR_2g096550 45.977 174 92 2 2 173 11 184 6.68e-51 166
MsG0680031375.01.T01 MTR_8g093740 49.405 168 82 3 3 168 10 176 1.66e-50 164
MsG0680031375.01.T01 MTR_8g107070 47.312 186 90 1 4 189 12 189 2.64e-50 166
MsG0680031375.01.T01 MTR_3g096350 49.112 169 83 3 3 169 9 176 1.13e-49 162
MsG0680031375.01.T01 MTR_1g029450 49.405 168 82 3 3 168 14 180 1.23e-49 162
MsG0680031375.01.T01 MTR_8g103550 44.375 160 89 0 8 167 11 170 1.64e-48 159
MsG0680031375.01.T01 MTR_3g064390 43.750 160 90 0 8 167 12 171 3.36e-48 158
MsG0680031375.01.T01 MTR_5g076590 44.375 160 89 0 8 167 12 171 4.27e-48 158
MsG0680031375.01.T01 MTR_1g090717 50.000 172 81 4 2 169 11 181 7.00e-48 158
MsG0680031375.01.T01 MTR_1g094220 41.615 161 93 1 8 167 33 193 4.98e-47 155
MsG0680031375.01.T01 MTR_1g094220 42.857 154 87 1 8 160 33 186 1.15e-46 154
MsG0680031375.01.T01 MTR_1g094220 42.857 154 87 1 8 160 33 186 1.49e-46 154
MsG0680031375.01.T01 MTR_1g094220 42.857 154 87 1 8 160 33 186 3.63e-46 154
MsG0680031375.01.T01 MTR_1g062760 47.929 169 85 3 3 169 11 178 6.34e-46 153
MsG0680031375.01.T01 MTR_8g031810 65.138 109 24 1 1 109 1 95 6.78e-46 149
MsG0680031375.01.T01 MTR_2g102060 41.875 160 93 0 8 167 12 171 1.49e-45 151
MsG0680031375.01.T01 MTR_7g117910 48.951 143 73 0 4 146 18 160 7.39e-45 150
MsG0680031375.01.T01 MTR_1g068730 52.756 127 60 0 3 129 12 138 1.38e-44 148
MsG0680031375.01.T01 MTR_4g099470 53.846 130 60 0 38 167 16 145 1.78e-44 148
MsG0680031375.01.T01 MTR_1g068740 52.756 127 60 0 3 129 12 138 2.23e-44 148
MsG0680031375.01.T01 MTR_3g087160 37.297 185 111 1 7 186 10 194 1.19e-43 147
MsG0680031375.01.T01 MTR_4g098950 39.130 161 98 0 7 167 10 170 3.12e-42 143
MsG0680031375.01.T01 MTR_8g090215 39.130 161 98 0 7 167 10 170 6.96e-42 142
MsG0680031375.01.T01 MTR_5g013900 39.130 161 98 0 7 167 10 170 3.07e-41 140
MsG0680031375.01.T01 MTR_8g093740 48.120 133 67 2 38 168 11 143 4.97e-37 129
MsG0680031375.01.T01 MTR_7g103070 52.000 125 58 2 47 169 1 125 1.04e-36 127
MsG0680031375.01.T01 MTR_3g096350 50.000 122 58 3 3 122 9 129 1.06e-35 125
MsG0680031375.01.T01 MTR_3g096350 50.000 124 59 3 3 124 9 131 1.33e-35 124
MsG0680031375.01.T01 MTR_8g092020 38.857 175 100 3 6 173 12 186 3.25e-35 125
MsG0680031375.01.T01 MTR_3g064390 42.400 125 72 0 8 132 12 136 3.48e-35 124
MsG0680031375.01.T01 MTR_4g069850 39.766 171 96 3 6 169 8 178 7.44e-35 124
MsG0680031375.01.T01 MTR_1g097420 38.953 172 98 3 6 170 8 179 4.09e-34 122
MsG0680031375.01.T01 MTR_4g012940 37.791 172 100 3 6 170 8 179 3.49e-32 117
MsG0680031375.01.T01 MTR_2g101890 37.209 172 101 3 6 170 10 181 6.33e-32 117
MsG0680031375.01.T01 MTR_6g039490 37.714 175 102 4 6 173 8 182 4.63e-31 115
MsG0680031375.01.T01 MTR_1g097420 36.782 174 101 4 4 170 35 206 4.16e-29 110
MsG0680031375.01.T01 MTR_2g005500 35.758 165 66 1 3 167 6 130 6.53e-28 105
MsG0680031375.01.T01 MTR_6g087980 32.597 181 108 5 1 169 1 179 3.79e-24 96.7
MsG0680031375.01.T01 MTR_2g090875 31.395 172 104 5 1 160 1 170 2.13e-23 94.4
MsG0680031375.01.T01 MTR_3g107713 32.298 161 106 2 7 167 14 171 1.08e-22 93.2
MsG0680031375.01.T01 MTR_3g107707 32.298 161 106 2 7 167 14 171 1.14e-22 92.8
MsG0680031375.01.T01 MTR_3g107717 32.298 161 106 2 7 167 14 171 1.30e-22 92.8
MsG0680031375.01.T01 MTR_4g088055 30.814 172 105 5 1 160 1 170 2.20e-22 91.7
MsG0680031375.01.T01 MTR_4g073250 32.044 181 109 6 1 169 1 179 4.87e-22 90.9
MsG0680031375.01.T01 MTR_3g078260 31.138 167 101 5 6 160 8 172 6.52e-21 88.2
MsG0680031375.01.T01 MTR_8g075240 28.488 172 109 5 1 160 1 170 4.65e-20 85.5
MsG0680031375.01.T01 MTR_5g022600 27.907 172 110 5 1 160 1 170 2.62e-19 83.6
MsG0680031375.01.T01 MTR_1452s0010 40.217 92 55 0 26 117 1 92 5.93e-18 77.4
MsG0680031375.01.T01 MTR_4g113620 27.879 165 107 3 7 171 14 166 3.06e-16 75.5
MsG0680031375.01.T01 MTR_1686s0010 36.957 92 58 0 26 117 1 92 3.18e-16 72.4
MsG0680031375.01.T01 MTR_3g078260 30.172 116 78 3 6 120 8 121 3.49e-14 68.6
MsG0680031375.01.T01 MTR_1g059590 32.704 159 97 5 2 160 427 575 2.90e-13 69.3
MsG0680031375.01.T01 MTR_1g059590 32.704 159 97 5 2 160 394 542 2.91e-13 69.3
MsG0680031375.01.T01 MTR_2g078000 44.262 61 29 1 68 128 47 102 8.39e-13 63.5
MsG0680031375.01.T01 MTR_1g069245 42.667 75 42 1 38 112 125 198 2.65e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031375.01.T01 AT4G35860 74.118 255 21 1 1 255 1 210 1.54e-137 385
MsG0680031375.01.T01 AT4G17170 72.157 255 26 1 1 255 1 210 1.89e-129 365
MsG0680031375.01.T01 AT4G17160 79.891 184 37 0 1 184 1 184 4.14e-108 311
MsG0680031375.01.T01 AT4G35860 68.421 209 21 1 47 255 1 164 7.23e-100 288
MsG0680031375.01.T01 AT5G45750 50.279 179 89 0 3 181 10 188 2.81e-61 192
MsG0680031375.01.T01 AT1G16920 52.695 167 79 0 3 169 10 176 6.08e-61 191
MsG0680031375.01.T01 AT3G12160 51.786 168 81 0 4 171 13 180 4.74e-60 189
MsG0680031375.01.T01 AT4G39990 54.777 157 71 0 4 160 15 171 1.53e-59 188
MsG0680031375.01.T01 AT1G06400 53.333 165 77 0 3 167 10 174 2.12e-59 187
MsG0680031375.01.T01 AT1G02130 52.071 169 81 0 3 171 5 173 2.99e-59 187
MsG0680031375.01.T01 AT5G60860 48.603 179 92 0 3 181 10 188 3.13e-59 187
MsG0680031375.01.T01 AT4G17530 53.333 165 77 0 3 167 5 169 3.16e-59 187
MsG0680031375.01.T01 AT1G09630 55.696 158 70 0 3 160 9 166 3.41e-59 187
MsG0680031375.01.T01 AT5G59150 52.071 169 81 0 3 171 9 177 4.73e-59 187
MsG0680031375.01.T01 AT5G65270 54.140 157 72 0 4 160 15 171 4.86e-59 187
MsG0680031375.01.T01 AT5G47960 53.049 164 77 0 4 167 13 176 7.22e-59 186
MsG0680031375.01.T01 AT3G46830 54.430 158 72 0 3 160 9 166 1.15e-58 186
MsG0680031375.01.T01 AT3G46830 54.430 158 72 0 3 160 9 166 1.15e-58 186
MsG0680031375.01.T01 AT4G18800 52.096 167 80 0 3 169 10 176 1.18e-58 186
MsG0680031375.01.T01 AT5G59840 51.744 172 82 1 3 173 12 183 1.31e-58 186
MsG0680031375.01.T01 AT2G33870 49.171 181 92 0 3 183 10 190 1.49e-58 186
MsG0680031375.01.T01 AT1G07410 53.797 158 73 0 3 160 9 166 1.71e-58 185
MsG0680031375.01.T01 AT4G18430 50.857 175 86 0 3 177 10 184 1.86e-58 185
MsG0680031375.01.T01 AT3G15060 48.619 181 93 0 3 183 10 190 1.98e-58 185
MsG0680031375.01.T01 AT3G53610 51.163 172 83 1 3 173 12 183 7.87e-58 184
MsG0680031375.01.T01 AT3G53610 51.163 172 83 1 3 173 12 183 7.87e-58 184
MsG0680031375.01.T01 AT3G53610 51.163 172 83 1 3 173 12 183 7.87e-58 184
MsG0680031375.01.T01 AT5G47200 52.727 165 78 0 3 167 5 169 1.92e-57 182
MsG0680031375.01.T01 AT1G28550 48.066 181 94 0 3 183 10 190 3.58e-57 182
MsG0680031375.01.T01 AT3G46060 50.581 172 84 1 3 173 12 183 5.61e-57 181
MsG0680031375.01.T01 AT3G46060 50.581 172 84 1 3 173 12 183 5.61e-57 181
MsG0680031375.01.T01 AT3G46060 50.581 172 84 1 3 173 12 183 5.61e-57 181
MsG0680031375.01.T01 AT2G43130 51.190 168 82 0 4 171 10 177 4.23e-56 179
MsG0680031375.01.T01 AT3G09900 50.588 170 83 1 3 171 12 181 3.67e-55 177
MsG0680031375.01.T01 AT3G11730 51.515 165 80 0 3 167 5 169 7.96e-55 176
MsG0680031375.01.T01 AT1G18200 51.829 164 79 0 4 167 11 174 1.34e-54 176
MsG0680031375.01.T01 AT3G07410 46.073 191 100 1 4 194 10 197 1.73e-54 175
MsG0680031375.01.T01 AT1G05810 45.550 191 101 1 4 194 10 197 2.12e-54 175
MsG0680031375.01.T01 AT5G47520 51.176 170 82 1 2 171 10 178 2.13e-54 175
MsG0680031375.01.T01 AT1G73640 52.439 164 78 0 4 167 11 174 2.43e-54 175
MsG0680031375.01.T01 AT5G03520 50.000 172 85 1 3 173 12 183 2.46e-54 174
MsG0680031375.01.T01 AT1G05810 45.550 191 101 1 4 194 56 243 5.70e-54 175
MsG0680031375.01.T01 AT2G31680 49.405 168 85 0 4 171 10 177 1.25e-53 173
MsG0680031375.01.T01 AT1G43890 52.071 169 78 3 3 169 10 177 1.10e-52 170
MsG0680031375.01.T01 AT1G43890 52.071 169 78 3 3 169 10 177 1.10e-52 170
MsG0680031375.01.T01 AT1G43890 52.071 169 78 3 3 169 10 177 1.10e-52 170
MsG0680031375.01.T01 AT1G01200 47.929 169 87 1 4 171 26 194 1.47e-51 168
MsG0680031375.01.T01 AT5G03530 49.708 171 79 4 3 169 10 177 4.07e-48 159
MsG0680031375.01.T01 AT5G03530 49.708 171 79 4 3 169 10 177 4.07e-48 159
MsG0680031375.01.T01 AT5G45130 44.375 160 89 0 8 167 12 171 2.29e-47 156
MsG0680031375.01.T01 AT4G19640 43.125 160 91 0 8 167 12 171 4.37e-47 155
MsG0680031375.01.T01 AT5G45130 44.304 158 88 0 10 167 22 179 1.08e-46 155
MsG0680031375.01.T01 AT3G54840 41.558 154 89 1 8 160 35 188 9.06e-45 149
MsG0680031375.01.T01 AT3G54840 41.558 154 89 1 8 160 35 188 1.31e-44 149
MsG0680031375.01.T01 AT3G54840 41.447 152 88 1 10 160 3 154 1.71e-44 148
MsG0680031375.01.T01 AT4G39890 41.358 162 94 1 7 167 10 171 7.56e-43 145
MsG0680031375.01.T01 AT5G10260 39.130 161 98 0 7 167 10 170 2.92e-42 143
MsG0680031375.01.T01 AT5G59150 50.806 124 61 0 48 171 3 126 5.32e-41 139
MsG0680031375.01.T01 AT2G22290 38.509 161 99 0 7 167 10 170 1.78e-40 139
MsG0680031375.01.T01 AT3G09910 46.286 175 87 4 3 173 10 181 7.32e-40 137
MsG0680031375.01.T01 AT3G09910 46.286 175 87 4 3 173 10 181 7.32e-40 137
MsG0680031375.01.T01 AT2G44610 37.267 161 101 0 7 167 10 170 1.49e-39 136
MsG0680031375.01.T01 AT5G64990 39.024 164 100 0 7 170 8 171 1.74e-39 136
MsG0680031375.01.T01 AT3G09910 44.444 171 88 4 3 169 10 177 8.41e-39 134
MsG0680031375.01.T01 AT3G09910 44.444 171 88 4 3 169 10 177 8.41e-39 134
MsG0680031375.01.T01 AT3G09910 44.444 171 88 4 3 169 10 177 8.41e-39 134
MsG0680031375.01.T01 AT5G03520 47.015 134 70 1 41 173 40 173 1.61e-38 134
MsG0680031375.01.T01 AT5G64990 37.427 171 100 1 7 170 8 178 1.05e-36 129
MsG0680031375.01.T01 AT5G39620 39.766 171 96 3 7 170 6 176 5.49e-36 127
MsG0680031375.01.T01 AT3G18820 39.535 172 97 3 6 170 8 179 1.29e-34 124
MsG0680031375.01.T01 AT2G21880 38.953 172 98 3 6 170 9 180 1.63e-34 124
MsG0680031375.01.T01 AT1G22740 37.714 175 102 3 6 173 8 182 1.80e-34 123
MsG0680031375.01.T01 AT4G19640 40.476 126 75 0 8 133 12 137 7.36e-34 120
MsG0680031375.01.T01 AT4G19640 39.695 131 79 0 8 138 12 142 1.26e-33 120
MsG0680031375.01.T01 AT4G09720 38.953 172 98 3 6 170 8 179 1.58e-33 121
MsG0680031375.01.T01 AT1G49300 39.264 163 92 3 6 161 8 170 6.34e-33 119
MsG0680031375.01.T01 AT1G49300 39.264 163 92 3 6 161 8 170 6.34e-33 119
MsG0680031375.01.T01 AT1G52280 39.506 162 91 3 6 160 8 169 7.36e-33 119
MsG0680031375.01.T01 AT3G16100 37.791 172 100 3 6 170 8 179 3.76e-32 117
MsG0680031375.01.T01 AT4G09720 37.288 177 99 4 6 170 8 184 3.23e-31 115
MsG0680031375.01.T01 AT4G09720 36.612 183 98 4 6 170 8 190 3.17e-30 112
MsG0680031375.01.T01 AT2G21880 37.255 153 89 3 25 170 3 155 3.00e-26 101
MsG0680031375.01.T01 AT2G21880 37.255 153 89 3 25 170 3 155 3.00e-26 101
MsG0680031375.01.T01 AT2G21880 34.302 172 98 4 6 170 9 172 9.33e-25 98.2
MsG0680031375.01.T01 AT4G28950 31.844 179 110 5 1 169 1 177 4.36e-24 96.7
MsG0680031375.01.T01 AT4G09720 38.571 140 79 3 38 170 6 145 1.19e-23 94.4
MsG0680031375.01.T01 AT4G09720 38.571 140 79 3 38 170 6 145 1.19e-23 94.4
MsG0680031375.01.T01 AT4G09720 38.571 140 79 3 38 170 6 145 1.19e-23 94.4
MsG0680031375.01.T01 AT4G35020 32.044 181 109 5 1 169 1 179 1.99e-23 94.4
MsG0680031375.01.T01 AT4G35020 32.044 181 109 5 1 169 1 179 1.99e-23 94.4
MsG0680031375.01.T01 AT4G35020 32.044 181 109 5 1 169 1 179 1.99e-23 94.4
MsG0680031375.01.T01 AT2G44690 31.818 176 106 5 6 169 18 191 2.10e-23 94.7
MsG0680031375.01.T01 AT5G46025 43.396 106 59 1 67 171 5 110 3.19e-23 91.3
MsG0680031375.01.T01 AT5G20020 32.298 161 106 2 7 167 14 171 1.24e-22 92.8
MsG0680031375.01.T01 AT5G20010 32.298 161 106 2 7 167 14 171 1.57e-22 92.8
MsG0680031375.01.T01 AT5G55190 32.298 161 106 2 7 167 14 171 1.71e-22 92.4
MsG0680031375.01.T01 AT1G75840 30.233 172 106 5 1 160 1 170 4.59e-22 90.9
MsG0680031375.01.T01 AT5G55080 31.056 161 108 2 7 167 14 171 2.62e-21 89.4
MsG0680031375.01.T01 AT1G20090 29.940 167 103 5 6 160 5 169 2.90e-21 88.6
MsG0680031375.01.T01 AT5G45970 30.233 172 106 5 1 160 1 170 3.68e-21 88.6
MsG0680031375.01.T01 AT3G51300 28.488 172 109 5 1 160 1 170 2.90e-20 85.9
MsG0680031375.01.T01 AT3G48040 30.539 167 102 5 6 160 8 172 4.79e-20 85.9
MsG0680031375.01.T01 AT2G17800 28.488 172 109 5 1 160 1 170 1.57e-19 84.0
MsG0680031375.01.T01 AT2G17800 28.488 172 109 5 1 160 1 170 1.57e-19 84.0
MsG0680031375.01.T01 AT5G62880 28.090 178 114 5 6 171 8 183 2.07e-19 84.3
MsG0680031375.01.T01 AT4G35950 27.907 172 110 5 1 160 1 170 7.57e-19 82.4
MsG0680031375.01.T01 AT5G62880 29.518 166 103 5 6 159 8 171 9.66e-18 79.3
MsG0680031375.01.T01 AT3G48040 29.814 161 99 5 6 154 8 166 1.24e-17 78.6
MsG0680031375.01.T01 AT4G35020 33.058 121 78 3 1 120 1 119 2.79e-16 73.9
MsG0680031375.01.T01 AT4G35020 33.058 121 78 3 1 120 1 119 2.79e-16 73.9
MsG0680031375.01.T01 AT4G08190 46.875 64 31 1 97 160 67 127 8.52e-11 58.5

Find 66 sgRNAs with CRISPR-Local

Find 466 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCTTGTATTTAGAGTATC+TGG 0.238285 6:-19349191 MsG0680031375.01.T01:intron
AAGATGAAACGACGTCGTTT+AGG 0.242969 6:+19355306 None:intergenic
ATGAGTGTGATTGTCATATT+AGG 0.263971 6:+19350399 None:intergenic
GAGCAATTTGCAAAGGAAAA+TGG 0.296368 6:-19350324 MsG0680031375.01.T01:CDS
GTATGCTTACTATTGATTCT+AGG 0.297790 6:-19355046 MsG0680031375.01.T01:CDS
ACATTAGGTAACAGGAAAAT+AGG 0.321028 6:+19349168 None:intergenic
TTTAGCCAAAAGGAAACATT+AGG 0.325980 6:+19349153 None:intergenic
AGATGAAACGACGTCGTTTA+GGG 0.328844 6:+19355307 None:intergenic
AATATGACAATCACACTCAT+AGG 0.339723 6:-19350396 MsG0680031375.01.T01:CDS
CTTACTATTGGTGTTGAGTT+TGG 0.348994 6:-19355074 MsG0680031375.01.T01:CDS
AAAAGGAAACATTAGGTAAC+AGG 0.358344 6:+19349160 None:intergenic
TGTTACCTAATGTTTCCTTT+TGG 0.359575 6:-19349158 MsG0680031375.01.T01:CDS
GGCCGATTAAGCTTCAGATA+TGG 0.370720 6:-19355025 MsG0680031375.01.T01:CDS
TCCCATATCTGAAGCTTAAT+CGG 0.372606 6:+19355023 None:intergenic
CCTGTTCATGATCTTACTAT+TGG 0.378228 6:-19355086 MsG0680031375.01.T01:CDS
TTCCATCTCTGCCTCCTGCT+TGG 0.391979 6:+19349067 None:intergenic
CATTTAATCATTTAGCAAGT+TGG 0.403675 6:-19350449 MsG0680031375.01.T01:CDS
TCCTTCAGTTCACTGATAAG+AGG 0.407370 6:-19355115 MsG0680031375.01.T01:CDS
CCTCTTTGCTCACCGCCCTT+CGG 0.425447 6:+19350352 None:intergenic
TCATACTACAGAGGAGCAGC+AGG 0.434482 6:-19352199 MsG0680031375.01.T01:CDS
GTGACGTATAATGTGGGTAT+AGG 0.438152 6:+19355441 None:intergenic
GCCGATTAAGCTTCAGATAT+GGG 0.441786 6:-19355024 MsG0680031375.01.T01:CDS
TTCTAGTTTATGACATTACA+AGG 0.459787 6:-19352171 MsG0680031375.01.T01:intron
CTGCCTCCTGCTTGGCCTTG+TGG 0.463852 6:+19349075 None:intergenic
GGCCAAGCAGGAGGCAGAGA+TGG 0.468575 6:-19349069 MsG0680031375.01.T01:CDS
CAGACATGTGGTATAAAAGT+TGG 0.477942 6:-19349108 MsG0680031375.01.T01:CDS
TTCTCTACGGTGCAGGTGTA+GGG 0.493014 6:-19355151 MsG0680031375.01.T01:intron
ACCTCTTATCAGTGAACTGA+AGG 0.507063 6:+19355114 None:intergenic
TTTGAGAAGAAAGGAAAGAG+AGG 0.512702 6:+19355341 None:intergenic
GGACGTCCACAAGGCCAAGC+AGG 0.515013 6:-19349081 MsG0680031375.01.T01:CDS
CCAATAGTAAGATCATGAAC+AGG 0.520338 6:+19355086 None:intergenic
ACTGTAGATAGTTACCTCAT+TGG 0.524670 6:+19350076 None:intergenic
TAATCATTTAGCAAGTTGGC+TGG 0.525305 6:-19350445 MsG0680031375.01.T01:CDS
GACAGCACAAAATGTGGAAG+AGG 0.531272 6:-19350274 MsG0680031375.01.T01:intron
ACACATCAAAGACACCATCT+TGG 0.532495 6:+19350099 None:intergenic
AGAGATGGAACTGTTGCTGC+AGG 0.538333 6:-19349054 MsG0680031375.01.T01:CDS
AACTAATGTGACGTATAATG+TGG 0.538605 6:+19355434 None:intergenic
AGGGCGGTGAGCAAAGAGGA+GGG 0.541053 6:-19350348 MsG0680031375.01.T01:CDS
AAGGGCGGTGAGCAAAGAGG+AGG 0.542119 6:-19350349 MsG0680031375.01.T01:CDS
TGTGGTATAAAAGTTGGCTA+TGG 0.550908 6:-19349102 MsG0680031375.01.T01:CDS
TGTGATTGTCATATTAGGAT+TGG 0.556673 6:+19350404 None:intergenic
CGATGATGATGTACTTGAAG+AGG 0.558316 6:+19355262 None:intergenic
CTCTTCAAGTACATCATCAT+CGG 0.560852 6:-19355261 MsG0680031375.01.T01:CDS
TGCCAAGACAGCACAAAATG+TGG 0.572251 6:-19350280 MsG0680031375.01.T01:CDS
ATATGACAATCACACTCATA+GGG 0.573464 6:-19350395 MsG0680031375.01.T01:CDS
ATTAGTTGTGATGATTGCAT+TGG 0.577277 6:-19350027 MsG0680031375.01.T01:intron
TACATCATCATCGGTGACAC+AGG 0.585497 6:-19355252 MsG0680031375.01.T01:intron
GATGAAACGACGTCGTTTAG+GGG 0.592223 6:+19355308 None:intergenic
CCGAAGGGCGGTGAGCAAAG+AGG 0.595172 6:-19350352 MsG0680031375.01.T01:CDS
ATTCTTCAGAACATCCAAGA+TGG 0.605283 6:-19350113 MsG0680031375.01.T01:CDS
TCTGTAGTATGATCTAGTGA+TGG 0.606223 6:+19352210 None:intergenic
GGAGGGAGAGCAATTTGCAA+AGG 0.613214 6:-19350331 MsG0680031375.01.T01:CDS
GTTGGCTATGGACGTCCACA+AGG 0.613693 6:-19349090 MsG0680031375.01.T01:CDS
GTGTGATCTGTCTCACCGAA+GGG 0.615957 6:-19350367 MsG0680031375.01.T01:CDS
CGTCCACAAGGCCAAGCAGG+AGG 0.622485 6:-19349078 MsG0680031375.01.T01:CDS
ACTAATGTGACGTATAATGT+GGG 0.628468 6:+19355435 None:intergenic
AATCTATTATTGCAGACATG+TGG 0.643188 6:-19349120 MsG0680031375.01.T01:CDS
CAAGTTGGCTGGAAGATGCG+CGG 0.646347 6:-19350434 MsG0680031375.01.T01:CDS
AGTGTGATCTGTCTCACCGA+AGG 0.647561 6:-19350368 MsG0680031375.01.T01:CDS
CATACTACAGAGGAGCAGCA+GGG 0.654741 6:-19352198 MsG0680031375.01.T01:CDS
ATACTACAGAGGAGCAGCAG+GGG 0.656408 6:-19352197 MsG0680031375.01.T01:CDS
GAAGAGGTAGTCGTACGACA+TGG 0.657558 6:+19355278 None:intergenic
GATGGAACTGTTGCTGCAGG+AGG 0.658044 6:-19349051 MsG0680031375.01.T01:CDS
TGATCTGTCTCACCGAAGGG+CGG 0.684516 6:-19350364 MsG0680031375.01.T01:CDS
ATCACTAGATCATACTACAG+AGG 0.697619 6:-19352208 MsG0680031375.01.T01:CDS
TGTCTTTGATGTGTCCAATG+AGG 0.741949 6:-19350090 MsG0680031375.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAAATAAATTATATAAAT+CGG - Chr6:19354552-19354571 MsG0680031375.01.T01:intron 0.0%
!! AAAAAAATTAAATTTGAAGA+TGG - Chr6:19350629-19350648 MsG0680031375.01.T01:intron 10.0%
!! AAAAAATTAAATTTGAAGAT+GGG - Chr6:19350630-19350649 MsG0680031375.01.T01:intron 10.0%
!! ACCAAAAAATTAAATAAATA+AGG + Chr6:19351348-19351367 None:intergenic 10.0%
!! ATAAATGTAAATATAGATAT+TGG - Chr6:19351819-19351838 MsG0680031375.01.T01:intron 10.0%
!! ATACAGTATATTATAATATA+AGG + Chr6:19350545-19350564 None:intergenic 10.0%
!!! AAAGAAAAAAAAATCATTTT+GGG - Chr6:19353230-19353249 MsG0680031375.01.T01:intron 10.0%
!!! ATTTAATTTTTTGGTATAAA+GGG - Chr6:19351353-19351372 MsG0680031375.01.T01:intron 10.0%
!!! ATTTTAGTTTATTTTAATTG+CGG + Chr6:19350023-19350042 None:intergenic 10.0%
!!! TATTTAATTTTTTGGTATAA+AGG - Chr6:19351352-19351371 MsG0680031375.01.T01:intron 10.0%
!!! TCCTTATTTATTTAATTTTT+TGG - Chr6:19351344-19351363 MsG0680031375.01.T01:intron 10.0%
!! AAAAATTAAATTTGAAGATG+GGG - Chr6:19350631-19350650 MsG0680031375.01.T01:intron 15.0%
!! AAAAATTCAATCAATCTTTA+TGG - Chr6:19353379-19353398 MsG0680031375.01.T01:intron 15.0%
!! ATCTATATTTACATTTATAC+AGG + Chr6:19351817-19351836 None:intergenic 15.0%
!! TAAAATTCAATCAATCTTTA+TGG - Chr6:19353288-19353307 MsG0680031375.01.T01:intron 15.0%
!! TAATGAGTTAAATCAAAATA+TGG - Chr6:19351120-19351139 MsG0680031375.01.T01:intron 15.0%
!! TACATACGTAAATTTATATA+TGG + Chr6:19351618-19351637 None:intergenic 15.0%
!! TATAAGAGAAATTATTAAGA+AGG - Chr6:19350718-19350737 MsG0680031375.01.T01:intron 15.0%
!! TGTGTTTAAAAATAGAAATA+GGG - Chr6:19351729-19351748 MsG0680031375.01.T01:intron 15.0%
!! TTGAAAATAAAAAATAAAGC+AGG - Chr6:19350242-19350261 MsG0680031375.01.T01:intron 15.0%
!!! ACAATTTTTATCAAATAATC+TGG - Chr6:19354867-19354886 MsG0680031375.01.T01:intron 15.0%
!!! CAAAGAAAAAAAAATCATTT+TGG - Chr6:19353229-19353248 MsG0680031375.01.T01:intron 15.0%
!!! CTTGCTAATTTTAAAAATAT+AGG - Chr6:19352931-19352950 MsG0680031375.01.T01:intron 15.0%
!!! GATCTTTTATAGATATATAT+CGG + Chr6:19352966-19352985 None:intergenic 15.0%
!!! TGTAACCATATTTTAAAAAT+AGG + Chr6:19351427-19351446 None:intergenic 15.0%
!!! TTTAATTTTTTGGTATAAAG+GGG - Chr6:19351354-19351373 MsG0680031375.01.T01:intron 15.0%
!! AAATTAAAAGGAAATCTTAC+TGG - Chr6:19355141-19355160 MsG0680031375.01.T01:intron 20.0%
!! AACCAAACAATAAAAAGTAA+AGG + Chr6:19351521-19351540 None:intergenic 20.0%
!! AACTAATAATCAATAACACA+AGG + Chr6:19355053-19355072 None:intergenic 20.0%
!! AATTAAAAGGAAATCTTACT+GGG - Chr6:19355142-19355161 MsG0680031375.01.T01:intron 20.0%
!! ACCTTAAAAATATGTTTATG+TGG - Chr6:19353822-19353841 MsG0680031375.01.T01:intron 20.0%
!! AGTTTATTATTTATGAAGCA+CGG - Chr6:19352885-19352904 MsG0680031375.01.T01:intron 20.0%
!! ATAAAAACCTGTAGTATATT+AGG + Chr6:19351958-19351977 None:intergenic 20.0%
!! ATCAGTAATAACAAAAGATA+AGG + Chr6:19352808-19352827 None:intergenic 20.0%
!! ATTGAACTATTTGTAATTAG+TGG - Chr6:19349637-19349656 MsG0680031375.01.T01:intron 20.0%
!! CAAAATCATAATATGTTTGA+GGG + Chr6:19354327-19354346 None:intergenic 20.0%
!! CCTTAAAAATATGTTTATGT+GGG - Chr6:19353823-19353842 MsG0680031375.01.T01:intron 20.0%
!! CTAATAATTGCTAAATGTTT+CGG - Chr6:19352491-19352510 MsG0680031375.01.T01:intron 20.0%
!! CTGATATCATCTTAAAATTA+GGG + Chr6:19353696-19353715 None:intergenic 20.0%
!! CTGTGTTTAAAAATAGAAAT+AGG - Chr6:19351728-19351747 MsG0680031375.01.T01:intron 20.0%
!! GAACAAAGTTATTTATTTAG+GGG + Chr6:19353941-19353960 None:intergenic 20.0%
!! GGAACAAAGTTATTTATTTA+GGG + Chr6:19353942-19353961 None:intergenic 20.0%
!! GTGTTTAAAAATAGAAATAG+GGG - Chr6:19351730-19351749 MsG0680031375.01.T01:intron 20.0%
!! TAAATATAGATATTGGAACA+AGG - Chr6:19351826-19351845 MsG0680031375.01.T01:intron 20.0%
!! TAATAATTGCTAAATGTTTC+GGG - Chr6:19352492-19352511 MsG0680031375.01.T01:intron 20.0%
!! TCTGATATCATCTTAAAATT+AGG + Chr6:19353697-19353716 None:intergenic 20.0%
!! TGGAACAAAGTTATTTATTT+AGG + Chr6:19353943-19353962 None:intergenic 20.0%
!! TGTTTAAAAATAGAAATAGG+GGG - Chr6:19351731-19351750 MsG0680031375.01.T01:intron 20.0%
!! TTAGAACAAAACAGAATTTA+AGG - Chr6:19352071-19352090 MsG0680031375.01.T01:intron 20.0%
!! TTATACCGAAAAGTTAAAAA+TGG - Chr6:19353093-19353112 MsG0680031375.01.T01:intron 20.0%
!!! AAAAAGTAAAGGAGTATAAT+TGG + Chr6:19351510-19351529 None:intergenic 20.0%
!!! AAAAGTAAAGGAGTATAATT+GGG + Chr6:19351509-19351528 None:intergenic 20.0%
!!! AATAATCAAAACCTTTTTTC+TGG + Chr6:19354788-19354807 None:intergenic 20.0%
!!! AATTTTGAATGATCGTTATT+TGG + Chr6:19350088-19350107 None:intergenic 20.0%
!!! ATAGGAAGAAATTTTTTGAT+TGG + Chr6:19353895-19353914 None:intergenic 20.0%
!!! CATAAATTGATTCGTTTATA+TGG + Chr6:19353963-19353982 None:intergenic 20.0%
!!! CTACTTTATTTGACTAATTT+TGG + Chr6:19355079-19355098 None:intergenic 20.0%
!!! GATTGAATTTTTAAGTTTGA+TGG + Chr6:19353371-19353390 None:intergenic 20.0%
!!! TAATGCCATTTTTAACTTTT+CGG + Chr6:19353101-19353120 None:intergenic 20.0%
!!! TAGGAAGAAATTTTTTGATT+GGG + Chr6:19353894-19353913 None:intergenic 20.0%
!!! TAGTAAGACTCATTTTTTAT+TGG + Chr6:19351866-19351885 None:intergenic 20.0%
!!! TCATACTATATCATTTTCTA+TGG + Chr6:19349044-19349063 None:intergenic 20.0%
!!! TGATTGAATTTTAAGTTTGA+TGG + Chr6:19353281-19353300 None:intergenic 20.0%
!!! TGCTAATTTTTTACTTGATT+CGG - Chr6:19353063-19353082 MsG0680031375.01.T01:intron 20.0%
!!! TTGCACCTATTTTTAAAATA+TGG - Chr6:19351419-19351438 MsG0680031375.01.T01:intron 20.0%
!!! TTTCTAATCTTTTCTACTAT+AGG + Chr6:19349866-19349885 None:intergenic 20.0%
! AAAAAAATAATACCACCTCA+AGG + Chr6:19355019-19355038 None:intergenic 25.0%
! AAAATAAAGCAGGTTGTAAA+AGG - Chr6:19350252-19350271 MsG0680031375.01.T01:intron 25.0%
! AAAGATTAGAAACTAGACTT+AGG - Chr6:19349874-19349893 MsG0680031375.01.T01:intron 25.0%
! AAAGTTATTTATTTAGGGGT+GGG + Chr6:19353937-19353956 None:intergenic 25.0%
! ACACAAAGTAGAAAAAATAG+TGG - Chr6:19350999-19351018 MsG0680031375.01.T01:intron 25.0%
! ACATTTAGCAATTATTAGAG+TGG + Chr6:19352489-19352508 None:intergenic 25.0%
! AGAACCTATCAAATATTTGT+TGG - Chr6:19353714-19353733 MsG0680031375.01.T01:intron 25.0%
! AGATTTCGTTGTTTAATTGT+AGG - Chr6:19352272-19352291 MsG0680031375.01.T01:intron 25.0%
! AGTTTCAATTCTTATGAACT+TGG - Chr6:19352841-19352860 MsG0680031375.01.T01:intron 25.0%
! ATCAAATAATCTGGTACAAA+CGG - Chr6:19354876-19354895 MsG0680031375.01.T01:intron 25.0%
! CAAACTAAGAAAAACTAACA+TGG + Chr6:19351668-19351687 None:intergenic 25.0%
! CATTTAATCATTTAGCAAGT+TGG - Chr6:19354077-19354096 MsG0680031375.01.T01:intron 25.0%
! CCAAAATCATAATATGTTTG+AGG + Chr6:19354328-19354347 None:intergenic 25.0%
! GAACCTATCAAATATTTGTT+GGG - Chr6:19353715-19353734 MsG0680031375.01.T01:intron 25.0%
! GGTTGTATGATAGAAAATAA+GGG - Chr6:19351537-19351556 MsG0680031375.01.T01:intron 25.0%
! GTGGATTTGAATGTTATATT+AGG - Chr6:19349656-19349675 MsG0680031375.01.T01:intron 25.0%
! GTTTCTTCATCTTAAACAAA+AGG + Chr6:19354593-19354612 None:intergenic 25.0%
! TAATATAAGGAAAAACTGTG+AGG + Chr6:19350532-19350551 None:intergenic 25.0%
! TATATCAAAAGTAGATCAGA+TGG - Chr6:19351884-19351903 MsG0680031375.01.T01:intron 25.0%
! TATATTTGTCTAAGTATCCT+TGG - Chr6:19352216-19352235 MsG0680031375.01.T01:CDS 25.0%
! TATTTACATTTATACAGGAG+TGG + Chr6:19351812-19351831 None:intergenic 25.0%
! TCAATAACACAAGGTAAATA+TGG + Chr6:19355044-19355063 None:intergenic 25.0%
! TCACTTACAATACATACAAA+AGG - Chr6:19352519-19352538 MsG0680031375.01.T01:intron 25.0%
! TCATTGAATGTTGGTATAAA+CGG + Chr6:19351387-19351406 None:intergenic 25.0%
! TGAAAAATCTGGTTATAAGT+GGG - Chr6:19353620-19353639 MsG0680031375.01.T01:intron 25.0%
! TGGTTGTATGATAGAAAATA+AGG - Chr6:19351536-19351555 MsG0680031375.01.T01:intron 25.0%
! TGTGAACTCTATTCTTTAAA+GGG - Chr6:19352667-19352686 MsG0680031375.01.T01:intron 25.0%
! TTATAGATATATATCGGTGA+CGG + Chr6:19352960-19352979 None:intergenic 25.0%
! TTGAAAAATCTGGTTATAAG+TGG - Chr6:19353619-19353638 MsG0680031375.01.T01:intron 25.0%
! TTGTGAACTCTATTCTTTAA+AGG - Chr6:19352666-19352685 MsG0680031375.01.T01:intron 25.0%
! TTGTGTTTGGTATTTGAATT+AGG - Chr6:19349596-19349615 MsG0680031375.01.T01:intron 25.0%
!! AAAAGTACAATCAATCGTTA+TGG - Chr6:19353453-19353472 MsG0680031375.01.T01:intron 25.0%
!! AAAGTAAAGGAGTATAATTG+GGG + Chr6:19351508-19351527 None:intergenic 25.0%
!! AATTTTCCACTATGTAGAAT+CGG + Chr6:19352002-19352021 None:intergenic 25.0%
!! ACTAGAAAATTTTGTTGATC+AGG - Chr6:19354047-19354066 MsG0680031375.01.T01:intron 25.0%
!! ATTTCTCTTATAGTTTTTCC+AGG + Chr6:19350710-19350729 None:intergenic 25.0%
!! CCTCAAACATATTATGATTT+TGG - Chr6:19354325-19354344 MsG0680031375.01.T01:intron 25.0%
!! GAGATATAAGTTGAAAAATC+TGG - Chr6:19353609-19353628 MsG0680031375.01.T01:intron 25.0%
!! TAACTCAACCTTTAGAAAAT+TGG + Chr6:19353666-19353685 None:intergenic 25.0%
!! TAATGAGTTGGAGAAATATA+TGG - Chr6:19350751-19350770 MsG0680031375.01.T01:intron 25.0%
!! TGAAGTAAAGAAAAAAGTGT+TGG + Chr6:19350436-19350455 None:intergenic 25.0%
!!! AACAGTAGGTTATGTTTTTA+TGG + Chr6:19354354-19354373 None:intergenic 25.0%
!!! AAGTAGAAGTTAATTTGTGT+TGG - Chr6:19354666-19354685 MsG0680031375.01.T01:intron 25.0%
!!! AATTTTCTAAAGGTTGAGTT+AGG - Chr6:19353665-19353684 MsG0680031375.01.T01:intron 25.0%
!!! ATGGTTACATCCTTTTTTAT+TGG - Chr6:19354934-19354953 MsG0680031375.01.T01:intron 25.0%
!!! CATTGAAAATTTTAGCCAAA+AGG + Chr6:19355386-19355405 None:intergenic 25.0%
!!! CCCACATAAACATATTTTTA+AGG + Chr6:19353826-19353845 None:intergenic 25.0%
!!! CTCCTTTACTTTTTATTGTT+TGG - Chr6:19351516-19351535 MsG0680031375.01.T01:intron 25.0%
!!! GAATTATTGCTTTTTGTGTT+TGG - Chr6:19349583-19349602 MsG0680031375.01.T01:intron 25.0%
!!! GATTGTACTTTTAAGTTTGA+TGG + Chr6:19353445-19353464 None:intergenic 25.0%
!!! GTGCACATATTTTTAATCAA+TGG + Chr6:19352600-19352619 None:intergenic 25.0%
!!! TCTCATTTTAACCAGAAAAA+AGG - Chr6:19354774-19354793 MsG0680031375.01.T01:intron 25.0%
!!! TGGTTTTTGATTGAATACTA+TGG - Chr6:19350771-19350790 MsG0680031375.01.T01:intron 25.0%
!!! TTCTAGTTTATGACATTACA+AGG - Chr6:19352355-19352374 MsG0680031375.01.T01:intron 25.0%
!!! TTTTCTAGTTTTCAGTTGAA+TGG + Chr6:19354036-19354055 None:intergenic 25.0%
AAAAGGAAACATTAGGTAAC+AGG + Chr6:19355369-19355388 None:intergenic 30.0%
AACTAATGTGACGTATAATG+TGG + Chr6:19349095-19349114 None:intergenic 30.0%
AAGTAGTGATGTTCAGTTAA+GGG + Chr6:19353143-19353162 None:intergenic 30.0%
AAGTTATTTATTTAGGGGTG+GGG + Chr6:19353936-19353955 None:intergenic 30.0%
AATATGACAATCACACTCAT+AGG - Chr6:19354130-19354149 MsG0680031375.01.T01:intron 30.0%
AATCTATTATTGCAGACATG+TGG - Chr6:19355406-19355425 MsG0680031375.01.T01:five_prime_UTR 30.0%
AATTAAATTTGAAGATGGGG+TGG - Chr6:19350634-19350653 MsG0680031375.01.T01:intron 30.0%
ACATTAGGTAACAGGAAAAT+AGG + Chr6:19355361-19355380 None:intergenic 30.0%
ACATTGTTCATAAAAACACG+CGG + Chr6:19353525-19353544 None:intergenic 30.0%
ACTAATGTGACGTATAATGT+GGG + Chr6:19349094-19349113 None:intergenic 30.0%
AGTTTATGACATTACAAGGT+TGG - Chr6:19352359-19352378 MsG0680031375.01.T01:intron 30.0%
ATATGACAATCACACTCATA+GGG - Chr6:19354131-19354150 MsG0680031375.01.T01:intron 30.0%
ATGAGTGTGATTGTCATATT+AGG + Chr6:19354130-19354149 None:intergenic 30.0%
ATTAGATCCTCATTGAATGT+TGG + Chr6:19351396-19351415 None:intergenic 30.0%
ATTAGTTGTGATGATTGCAT+TGG - Chr6:19354499-19354518 MsG0680031375.01.T01:intron 30.0%
ATTTGTGAAAAGAACAACCA+GGG - Chr6:19350563-19350582 MsG0680031375.01.T01:intron 30.0%
CAAAGTTATTTATTTAGGGG+TGG + Chr6:19353938-19353957 None:intergenic 30.0%
CAAGTTACATACATGTAGAA+GGG + Chr6:19352455-19352474 None:intergenic 30.0%
CACAACATTTAACACAAAAC+TGG - Chr6:19350301-19350320 MsG0680031375.01.T01:CDS 30.0%
CCGATTCTGATTTCAAAATT+GGG - Chr6:19349346-19349365 MsG0680031375.01.T01:intron 30.0%
CGGTGTAAAACTAATTTAAC+CGG - Chr6:19351473-19351492 MsG0680031375.01.T01:intron 30.0%
CTATAGACCTAATATACTAC+AGG - Chr6:19351948-19351967 MsG0680031375.01.T01:intron 30.0%
CTGATGTTGAAAAACATGAA+GGG + Chr6:19351784-19351803 None:intergenic 30.0%
GAATCAATCTTGTTAAGATC+CGG + Chr6:19350591-19350610 None:intergenic 30.0%
GTAAAACTAATTTAACCGGT+GGG - Chr6:19351477-19351496 MsG0680031375.01.T01:intron 30.0%
GTTTATACCAACATTCAATG+AGG - Chr6:19351386-19351405 MsG0680031375.01.T01:intron 30.0%
TAAAACTAATTTAACCGGTG+GGG - Chr6:19351478-19351497 MsG0680031375.01.T01:intron 30.0%
TAAAGTTCAATCTCTCACTT+TGG + Chr6:19352556-19352575 None:intergenic 30.0%
TAGAAATGACATTAGAGAGA+GGG - Chr6:19349828-19349847 MsG0680031375.01.T01:intron 30.0%
TATTTGTGAAAAGAACAACC+AGG - Chr6:19350562-19350581 MsG0680031375.01.T01:intron 30.0%
TCAAATAATCTGGTACAAAC+GGG - Chr6:19354877-19354896 MsG0680031375.01.T01:intron 30.0%
TCACTTCAAAAGTAACACAT+AGG + Chr6:19351242-19351261 None:intergenic 30.0%
TCTGATGTTGAAAAACATGA+AGG + Chr6:19351785-19351804 None:intergenic 30.0%
TGACCCAACAAATATTTGAT+AGG + Chr6:19353721-19353740 None:intergenic 30.0%
TGAGAAGAAAGAGAAAAAAG+TGG - Chr6:19350384-19350403 MsG0680031375.01.T01:CDS 30.0%
TGATGTTGAAAAACATGAAG+GGG + Chr6:19351783-19351802 None:intergenic 30.0%
TGGTTTATGACAGAACATTA+TGG - Chr6:19351140-19351159 MsG0680031375.01.T01:intron 30.0%
TGTAAAACTAATTTAACCGG+TGG - Chr6:19351476-19351495 MsG0680031375.01.T01:intron 30.0%
TGTGATTGTCATATTAGGAT+TGG + Chr6:19354125-19354144 None:intergenic 30.0%
TGTGTAAAAACTGTTTACTC+TGG - Chr6:19351303-19351322 MsG0680031375.01.T01:intron 30.0%
TTAGAAATGACATTAGAGAG+AGG - Chr6:19349827-19349846 MsG0680031375.01.T01:intron 30.0%
TTTAGCCAAAAGGAAACATT+AGG + Chr6:19355376-19355395 None:intergenic 30.0%
! AAAATAGTGGAAAACAAGCT+TGG - Chr6:19351012-19351031 MsG0680031375.01.T01:intron 30.0%
! AAATAGTGGAAAACAAGCTT+GGG - Chr6:19351013-19351032 MsG0680031375.01.T01:intron 30.0%
! AAGTAAAGGAGTATAATTGG+GGG + Chr6:19351507-19351526 None:intergenic 30.0%
! ACCGATTCTGATTTCAAAAT+TGG - Chr6:19349345-19349364 MsG0680031375.01.T01:intron 30.0%
! AGGTTATAGCGTTTTATGTT+TGG + Chr6:19349168-19349187 None:intergenic 30.0%
! AGTAAGAAGAGTATATCAGA+TGG - Chr6:19349935-19349954 MsG0680031375.01.T01:intron 30.0%
! ATGTCTTGGTAATTATCATG+AGG - Chr6:19354989-19355008 MsG0680031375.01.T01:intron 30.0%
! TAACTTTTCGGTATAATCGA+TGG + Chr6:19353089-19353108 None:intergenic 30.0%
! TCTTAACAAGATTGATTCAG+TGG - Chr6:19350593-19350612 MsG0680031375.01.T01:intron 30.0%
! TGTTACCTAATGTTTCCTTT+TGG - Chr6:19355368-19355387 MsG0680031375.01.T01:five_prime_UTR 30.0%
! TGTTGTTGTTATTGCTGTAT+CGG - Chr6:19350858-19350877 MsG0680031375.01.T01:intron 30.0%
! TGTTTAAGATGAAGAAACAG+TGG - Chr6:19354595-19354614 MsG0680031375.01.T01:intron 30.0%
! TTCCTTGTATTTAGAGTATC+TGG - Chr6:19355335-19355354 MsG0680031375.01.T01:five_prime_UTR 30.0%
! TTTAAGGCACTTCATAATTC+AGG - Chr6:19352087-19352106 MsG0680031375.01.T01:intron 30.0%
!! AAATGGACTTTTATTCATGG+AGG - Chr6:19354219-19354238 MsG0680031375.01.T01:intron 30.0%
!! AATGTCACTTTCAAGTTACT+CGG + Chr6:19350169-19350188 None:intergenic 30.0%
!! CAGTTTTGTGTTAAATGTTG+TGG + Chr6:19350303-19350322 None:intergenic 30.0%
!! GGAAAATGGACTTTTATTCA+TGG - Chr6:19354216-19354235 MsG0680031375.01.T01:intron 30.0%
!! GTATGCTTACTATTGATTCT+AGG - Chr6:19349480-19349499 MsG0680031375.01.T01:intron 30.0%
!! TAGGTAGTATTTTCAAGATG+AGG + Chr6:19352418-19352437 None:intergenic 30.0%
!! TTCATGTTTTTCAACATCAG+AGG - Chr6:19351784-19351803 MsG0680031375.01.T01:intron 30.0%
!! TTGATTTTGAGTGTGGATTA+TGG + Chr6:19349143-19349162 None:intergenic 30.0%
!! TTTGGTCTTTTCAAATGTCT+TGG - Chr6:19354975-19354994 MsG0680031375.01.T01:intron 30.0%
!!! AATTGGGTTTTGATTCTCTA+CGG - Chr6:19349362-19349381 MsG0680031375.01.T01:intron 30.0%
!!! CCCAATTTTGAAATCAGAAT+CGG + Chr6:19349349-19349368 None:intergenic 30.0%
!!! GAGTTTTGTTTTGAGAAGAA+AGG + Chr6:19349197-19349216 None:intergenic 30.0%
!!! TTTGGTTTTGATTTTGAGTG+TGG + Chr6:19349150-19349169 None:intergenic 30.0%
AAACTAGACTTAGGTGGTTT+GGG - Chr6:19349883-19349902 MsG0680031375.01.T01:intron 35.0%
AAATAGGGGGTTTGAATGAT+AGG - Chr6:19351744-19351763 MsG0680031375.01.T01:intron 35.0%
AAGTGTCAATGTGTATGTGT+CGG + Chr6:19352914-19352933 None:intergenic 35.0%
ACTGTAGATAGTTACCTCAT+TGG + Chr6:19354453-19354472 None:intergenic 35.0%
AGAAATGACATTAGAGAGAG+GGG - Chr6:19349829-19349848 MsG0680031375.01.T01:intron 35.0%
AGCATTTCACTTCAGTTGTA+TGG + Chr6:19352725-19352744 None:intergenic 35.0%
AGGATGTAACCATTCATTCT+TGG + Chr6:19354927-19354946 None:intergenic 35.0%
AGTAGTGATGTTCAGTTAAG+GGG + Chr6:19353142-19353161 None:intergenic 35.0%
AGTCAAATAAAGTAGACGCA+TGG - Chr6:19355084-19355103 MsG0680031375.01.T01:CDS 35.0%
ATCAAAAGTAGATCAGATGG+AGG - Chr6:19351887-19351906 MsG0680031375.01.T01:intron 35.0%
ATCACTAGATCATACTACAG+AGG - Chr6:19352318-19352337 MsG0680031375.01.T01:intron 35.0%
ATGTGTTGAGAGTCACATAT+TGG - Chr6:19353584-19353603 MsG0680031375.01.T01:intron 35.0%
ATTAATCTGACGGCAGAAAA+TGG + Chr6:19350356-19350375 None:intergenic 35.0%
ATTCTTCAGAACATCCAAGA+TGG - Chr6:19354413-19354432 MsG0680031375.01.T01:intron 35.0%
ATTTAGACCAATAGAGGCAA+AGG - Chr6:19351061-19351080 MsG0680031375.01.T01:intron 35.0%
CAAATAATCTGGTACAAACG+GGG - Chr6:19354878-19354897 MsG0680031375.01.T01:intron 35.0%
CAACAACAACAATAACAACC+AGG + Chr6:19352026-19352045 None:intergenic 35.0%
CAGACATGTGGTATAAAAGT+TGG - Chr6:19355418-19355437 MsG0680031375.01.T01:five_prime_UTR 35.0%
CCAATAGTAAGATCATGAAC+AGG + Chr6:19349443-19349462 None:intergenic 35.0%
CCTGTTCATGATCTTACTAT+TGG - Chr6:19349440-19349459 MsG0680031375.01.T01:intron 35.0%
CTCCAATAAGCAAGATTTAG+AGG - Chr6:19351913-19351932 MsG0680031375.01.T01:intron 35.0%
CTCTTCAAGTACATCATCAT+CGG - Chr6:19349265-19349284 MsG0680031375.01.T01:intron 35.0%
CTTATTGAAAACTACAGCCA+AGG + Chr6:19352236-19352255 None:intergenic 35.0%
CTTCTTACTACATAATCCAC+AGG + Chr6:19349924-19349943 None:intergenic 35.0%
GAAGACATTTAGACCAATAG+AGG - Chr6:19351055-19351074 MsG0680031375.01.T01:intron 35.0%
GAAGTAGTGATGTTCAGTTA+AGG + Chr6:19353144-19353163 None:intergenic 35.0%
GAGCAATTTGCAAAGGAAAA+TGG - Chr6:19354202-19354221 MsG0680031375.01.T01:intron 35.0%
GAGCAGATCACCAATAAAAA+AGG + Chr6:19354947-19354966 None:intergenic 35.0%
GATTAGAAACTAGACTTAGG+TGG - Chr6:19349877-19349896 MsG0680031375.01.T01:intron 35.0%
GCAAGTTACATACATGTAGA+AGG + Chr6:19352456-19352475 None:intergenic 35.0%
GCATTTCACTTCAGTTGTAT+GGG + Chr6:19352724-19352743 None:intergenic 35.0%
GGATGTAACCATTCATTCTT+GGG + Chr6:19354926-19354945 None:intergenic 35.0%
TAGTGCAATATTGATCCAGA+TGG - Chr6:19352142-19352161 MsG0680031375.01.T01:intron 35.0%
TATACTCCTTAGACACTTCT+CGG + Chr6:19353195-19353214 None:intergenic 35.0%
TCGTTGTTTAATTGTAGGCT+GGG - Chr6:19352277-19352296 MsG0680031375.01.T01:intron 35.0%
TCTCCAACTCATTAATCGTT+AGG + Chr6:19350745-19350764 None:intergenic 35.0%
TCTGTAGTATGATCTAGTGA+TGG + Chr6:19352319-19352338 None:intergenic 35.0%
TGATCTGCTCATAAGAACTT+TGG - Chr6:19354957-19354976 MsG0680031375.01.T01:intron 35.0%
TGCATTGCAGAAAAAACAGT+AGG + Chr6:19354368-19354387 None:intergenic 35.0%
TGCCTCTAAATCTTGCTTAT+TGG + Chr6:19351918-19351937 None:intergenic 35.0%
TGTGGTATAAAAGTTGGCTA+TGG - Chr6:19355424-19355443 MsG0680031375.01.T01:five_prime_UTR 35.0%
TTATAAACCCAGTGCCATAT+AGG + Chr6:19354537-19354556 None:intergenic 35.0%
TTATCATGAGGTTTACCTTG+AGG - Chr6:19355001-19355020 MsG0680031375.01.T01:intron 35.0%
TTATGACATTACAAGGTTGG+TGG - Chr6:19352362-19352381 MsG0680031375.01.T01:intron 35.0%
TTCGTTGTTTAATTGTAGGC+TGG - Chr6:19352276-19352295 MsG0680031375.01.T01:intron 35.0%
TTGGAGTTAACCATCAACTT+TGG - Chr6:19353342-19353361 MsG0680031375.01.T01:intron 35.0%
TTTGAGAAGAAAGGAAAGAG+AGG + Chr6:19349188-19349207 None:intergenic 35.0%
! AAAACCGACTTATAAGGTGA+GGG + Chr6:19353855-19353874 None:intergenic 35.0%
! AAGAAGAGTATATCAGATGG+AGG - Chr6:19349938-19349957 MsG0680031375.01.T01:intron 35.0%
! AGAAGAGTATATCAGATGGA+GGG - Chr6:19349939-19349958 MsG0680031375.01.T01:intron 35.0%
! ATGATAGAAAATAAGGGTGC+AGG - Chr6:19351543-19351562 MsG0680031375.01.T01:intron 35.0%
! CCTCACAACCAATTTTCTAA+AGG - Chr6:19353655-19353674 MsG0680031375.01.T01:intron 35.0%
! CCTTTAGAAAATTGGTTGTG+AGG + Chr6:19353658-19353677 None:intergenic 35.0%
! CCTTTTCAATTCGCTCAAAA+GGG - Chr6:19349320-19349339 MsG0680031375.01.T01:intron 35.0%
! CCTTTTGAGCGAATTGAAAA+GGG + Chr6:19349322-19349341 None:intergenic 35.0%
! CTACATAGTGGAAAATTACC+TGG - Chr6:19352005-19352024 MsG0680031375.01.T01:intron 35.0%
! TAATCATTTAGCAAGTTGGC+TGG - Chr6:19354081-19354100 MsG0680031375.01.T01:intron 35.0%
! TCCCATATCTGAAGCTTAAT+CGG + Chr6:19349506-19349525 None:intergenic 35.0%
! TCGAAACCTATCTCTTTTAG+TGG + Chr6:19350410-19350429 None:intergenic 35.0%
! TGATAGAAAATAAGGGTGCA+GGG - Chr6:19351544-19351563 MsG0680031375.01.T01:intron 35.0%
! TTGATGGTATCCAAAGTTGA+TGG + Chr6:19353355-19353374 None:intergenic 35.0%
!! ACCTTATAAGTCGGTTTTGT+AGG - Chr6:19353857-19353876 MsG0680031375.01.T01:intron 35.0%
!! CCTTATAAGTCGGTTTTGTA+GGG - Chr6:19353858-19353877 MsG0680031375.01.T01:intron 35.0%
!! CTTACTATTGGTGTTGAGTT+TGG - Chr6:19349452-19349471 MsG0680031375.01.T01:intron 35.0%
!!! TACTGTTTTTTCTGCAATGC+AGG - Chr6:19354367-19354386 MsG0680031375.01.T01:intron 35.0%
AAAGATGCAGCGCGAATATA+TGG - Chr6:19354299-19354318 MsG0680031375.01.T01:intron 40.0%
AAAGTGAACTCGTGTTGCAT+TGG - Chr6:19351446-19351465 MsG0680031375.01.T01:intron 40.0%
AAGATGAAACGACGTCGTTT+AGG + Chr6:19349223-19349242 None:intergenic 40.0%
AAGGAAATCTTACTGGGATC+TGG - Chr6:19355148-19355167 MsG0680031375.01.T01:intron 40.0%
AAGTGGCCACTAAAAGAGAT+AGG - Chr6:19350401-19350420 MsG0680031375.01.T01:CDS 40.0%
AATAGAGACTAGAGAGAGTC+GGG - Chr6:19350971-19350990 MsG0680031375.01.T01:intron 40.0%
AATTTATGTCCAATCCCGTG+TGG - Chr6:19353975-19353994 MsG0680031375.01.T01:intron 40.0%
ACACATCAAAGACACCATCT+TGG + Chr6:19354430-19354449 None:intergenic 40.0%
ACCTCATACATAACACCACA+CGG + Chr6:19353993-19354012 None:intergenic 40.0%
ACCTCTTATCAGTGAACTGA+AGG + Chr6:19349415-19349434 None:intergenic 40.0%
AGAAAATTGGTTGTGAGGTG+AGG + Chr6:19353653-19353672 None:intergenic 40.0%
AGATGAAACGACGTCGTTTA+GGG + Chr6:19349222-19349241 None:intergenic 40.0%
AGTCAAATCACTAGAGGTAG+AGG - Chr6:19349963-19349982 MsG0680031375.01.T01:intron 40.0%
AGTTCAATCTCTCACTTTGG+AGG + Chr6:19352553-19352572 None:intergenic 40.0%
AGTTCTTCCTTTGCCTCTAT+TGG + Chr6:19351071-19351090 None:intergenic 40.0%
ATCCTACAGTCCAGATTGTA+TGG - Chr6:19355295-19355314 MsG0680031375.01.T01:exon 40.0%
CAATAGAGACTAGAGAGAGT+CGG - Chr6:19350970-19350989 MsG0680031375.01.T01:intron 40.0%
CAATCGCTGGATTAATCTGA+CGG + Chr6:19350366-19350385 None:intergenic 40.0%
CTTAGTGGGATACCTTGTAT+CGG - Chr6:19351191-19351210 MsG0680031375.01.T01:intron 40.0%
CTTATCCCACTAAGTGAGAT+CGG + Chr6:19350816-19350835 None:intergenic 40.0%
GAAACTAGACTTAGGTGGTT+TGG - Chr6:19349882-19349901 MsG0680031375.01.T01:intron 40.0%
GAGCCAGACAAAAAAGTTTG+GGG - Chr6:19349994-19350013 MsG0680031375.01.T01:intron 40.0%
GCACATCTAAATTGAGCTAC+TGG - Chr6:19353010-19353029 MsG0680031375.01.T01:intron 40.0%
GCCGATTAAGCTTCAGATAT+GGG - Chr6:19349502-19349521 MsG0680031375.01.T01:intron 40.0%
GGACCTAACGATTAATGAGT+TGG - Chr6:19350739-19350758 MsG0680031375.01.T01:intron 40.0%
GGAGCCAGACAAAAAAGTTT+GGG - Chr6:19349993-19350012 MsG0680031375.01.T01:intron 40.0%
GGCCAGATACTCTAAATACA+AGG + Chr6:19355340-19355359 None:intergenic 40.0%
GTGACGTATAATGTGGGTAT+AGG + Chr6:19349088-19349107 None:intergenic 40.0%
GTTAGGTGTCTTCAAACCTT+TGG - Chr6:19352758-19352777 MsG0680031375.01.T01:intron 40.0%
GTTTGTGTCCCAAGAATGAA+TGG - Chr6:19354915-19354934 MsG0680031375.01.T01:intron 40.0%
TAAATTTGAAGATGGGGTGG+CGG - Chr6:19350637-19350656 MsG0680031375.01.T01:intron 40.0%
TACATACATGTAGAAGGGCA+CGG + Chr6:19352450-19352469 None:intergenic 40.0%
TATTTATTTAGGGGTGGGGA+GGG + Chr6:19353932-19353951 None:intergenic 40.0%
TCCTTCAGTTCACTGATAAG+AGG - Chr6:19349411-19349430 MsG0680031375.01.T01:intron 40.0%
TCTACAAATATGCCTCCATC+TGG + Chr6:19352160-19352179 None:intergenic 40.0%
TGAACCTGATCTACCAAAGT+CGG - Chr6:19355251-19355270 MsG0680031375.01.T01:intron 40.0%
TGATGGTTAACTCCAAAGCA+TGG + Chr6:19353338-19353357 None:intergenic 40.0%
TGCAATATTGATCCAGATGG+AGG - Chr6:19352145-19352164 MsG0680031375.01.T01:intron 40.0%
TGCTGTACATTTGTGCAGTT+AGG - Chr6:19352741-19352760 MsG0680031375.01.T01:intron 40.0%
TGTAAGATGTGTCCATGCTT+CGG - Chr6:19353323-19353342 MsG0680031375.01.T01:intron 40.0%
TGTAAGATGTGTCCATGCTT+TGG - Chr6:19353323-19353342 MsG0680031375.01.T01:intron 40.0%
TGTCTTTGATGTGTCCAATG+AGG - Chr6:19354436-19354455 MsG0680031375.01.T01:intron 40.0%
TTAACACAAAACTGGCGTGT+AGG - Chr6:19350309-19350328 MsG0680031375.01.T01:CDS 40.0%
TTATTTATTTAGGGGTGGGG+AGG + Chr6:19353933-19353952 None:intergenic 40.0%
TTCTCTTTCTTCTCAATCGC+TGG + Chr6:19350379-19350398 None:intergenic 40.0%
! AAACCGACTTATAAGGTGAG+GGG + Chr6:19353854-19353873 None:intergenic 40.0%
! AAGGCACTTCATAATTCAGG+TGG - Chr6:19352090-19352109 MsG0680031375.01.T01:intron 40.0%
! AAGGGCACGGATATAAAGTT+AGG + Chr6:19352437-19352456 None:intergenic 40.0%
! ATACAAGGTATCCCACTAAG+TGG + Chr6:19351191-19351210 None:intergenic 40.0%
! CAAAACCGACTTATAAGGTG+AGG + Chr6:19353856-19353875 None:intergenic 40.0%
! CCCTACAAAACCGACTTATA+AGG + Chr6:19353861-19353880 None:intergenic 40.0%
! CCCTTTTCAATTCGCTCAAA+AGG - Chr6:19349319-19349338 MsG0680031375.01.T01:intron 40.0%
! CCCTTTTGAGCGAATTGAAA+AGG + Chr6:19349323-19349342 None:intergenic 40.0%
! CGATGATGATGTACTTGAAG+AGG + Chr6:19349267-19349286 None:intergenic 40.0%
! CTTGGAGTCTAGAACATTTG+TGG - Chr6:19352859-19352878 MsG0680031375.01.T01:intron 40.0%
! GAAGAGTATATCAGATGGAG+GGG - Chr6:19349940-19349959 MsG0680031375.01.T01:intron 40.0%
! TACAAGGTATCCCACTAAGT+GGG + Chr6:19351190-19351209 None:intergenic 40.0%
! TTCCACATTTTGTGCTGTCT+TGG + Chr6:19354251-19354270 None:intergenic 40.0%
!! ATGCACTATCGCTGTTTTAC+GGG - Chr6:19349706-19349725 MsG0680031375.01.T01:intron 40.0%
!! CATGCACTATCGCTGTTTTA+CGG - Chr6:19349705-19349724 MsG0680031375.01.T01:intron 40.0%
!! GGTTGTTTCTCGTCTAATGT+AGG + Chr6:19353805-19353824 None:intergenic 40.0%
!! TTTGTTGGGTCACTTGCTAT+CGG - Chr6:19353729-19353748 MsG0680031375.01.T01:intron 40.0%
AAGTTGTTGCCTTGAGTGTG+TGG - Chr6:19349784-19349803 MsG0680031375.01.T01:intron 45.0%
AATCATGCAGTCGCCTATCT+TGG - Chr6:19355182-19355201 MsG0680031375.01.T01:intron 45.0%
ACACTTCTCGGACACTTCTA+TGG + Chr6:19353183-19353202 None:intergenic 45.0%
ACTCGTGTTGCATTGGATGT+CGG - Chr6:19351453-19351472 MsG0680031375.01.T01:intron 45.0%
AGAAAATGGAGCAGGAGAGA+TGG + Chr6:19350342-19350361 None:intergenic 45.0%
AGACCCCTCACCTTATAAGT+CGG - Chr6:19353848-19353867 MsG0680031375.01.T01:intron 45.0%
AGCCATACAATCTGGACTGT+AGG + Chr6:19355300-19355319 None:intergenic 45.0%
AGGTGTCTTCAAACCTTTGG+TGG - Chr6:19352761-19352780 MsG0680031375.01.T01:intron 45.0%
ATAGAGACTAGAGAGAGTCG+GGG - Chr6:19350972-19350991 MsG0680031375.01.T01:intron 45.0%
ATGTAGCCGATCTCACTTAG+TGG - Chr6:19350807-19350826 MsG0680031375.01.T01:intron 45.0%
ATGTATGTGTGCGTGGAGAA+TGG - Chr6:19351637-19351656 MsG0680031375.01.T01:intron 45.0%
ATTTGACTCCTCCAGAGTGA+AGG + Chr6:19352701-19352720 None:intergenic 45.0%
CACTTCTCGGACACTTCTAT+GGG + Chr6:19353182-19353201 None:intergenic 45.0%
CCAGACAAAAAAGTTTGGGG+TGG - Chr6:19349997-19350016 MsG0680031375.01.T01:intron 45.0%
CCTCATACATAACACCACAC+GGG + Chr6:19353992-19354011 None:intergenic 45.0%
CGAGAGTAAAACAAGCGTAG+TGG - Chr6:19350887-19350906 MsG0680031375.01.T01:intron 45.0%
CGATCTCACTTAGTGGGATA+AGG - Chr6:19350814-19350833 MsG0680031375.01.T01:intron 45.0%
CGCTTAACTTATGTTCGTGC+TGG + Chr6:19349753-19349772 None:intergenic 45.0%
CGGAGCCAGACAAAAAAGTT+TGG - Chr6:19349992-19350011 MsG0680031375.01.T01:intron 45.0%
CGTATGTATGTATGTGTGCG+TGG - Chr6:19351630-19351649 MsG0680031375.01.T01:intron 45.0%
GAAAACAAGCTTGGGTGGTT+TGG - Chr6:19351021-19351040 MsG0680031375.01.T01:intron 45.0%
GAAAAGAACAACCAGGGAAC+CGG - Chr6:19350569-19350588 MsG0680031375.01.T01:intron 45.0%
GAAACTTGTCTGACACGTGT+TGG - Chr6:19353252-19353271 MsG0680031375.01.T01:intron 45.0%
GACAGCACAAAATGTGGAAG+AGG - Chr6:19354252-19354271 MsG0680031375.01.T01:intron 45.0%
GATGAAACGACGTCGTTTAG+GGG + Chr6:19349221-19349240 None:intergenic 45.0%
GCAGTGTAAACACCGATACA+AGG + Chr6:19351206-19351225 None:intergenic 45.0%
GGCCGATTAAGCTTCAGATA+TGG - Chr6:19349501-19349520 MsG0680031375.01.T01:intron 45.0%
TACATAACACCACACGGGAT+TGG + Chr6:19353987-19354006 None:intergenic 45.0%
TACATCATCATCGGTGACAC+AGG - Chr6:19349274-19349293 MsG0680031375.01.T01:intron 45.0%
TAGTGGAAAACAAGCTTGGG+TGG - Chr6:19351016-19351035 MsG0680031375.01.T01:intron 45.0%
TCACTTAGTGGGATAAGGCT+TGG - Chr6:19350819-19350838 MsG0680031375.01.T01:intron 45.0%
TCATGAGGTTTACCTTGAGG+TGG - Chr6:19355004-19355023 MsG0680031375.01.T01:intron 45.0%
TGACATTAGAGAGAGGGGTT+CGG - Chr6:19349834-19349853 MsG0680031375.01.T01:intron 45.0%
TGATGGTTAACTCCGAAGCA+TGG + Chr6:19353428-19353447 None:intergenic 45.0%
TGCCAAGACAGCACAAAATG+TGG - Chr6:19354246-19354265 MsG0680031375.01.T01:intron 45.0%
TGTAGCCGATCTCACTTAGT+GGG - Chr6:19350808-19350827 MsG0680031375.01.T01:intron 45.0%
TGTTCCGACTTTGGTAGATC+AGG + Chr6:19355258-19355277 None:intergenic 45.0%
TTAGACGCAGCCATACAATC+TGG + Chr6:19355308-19355327 None:intergenic 45.0%
TTTGACTCCTCCAGAGTGAA+GGG + Chr6:19352700-19352719 None:intergenic 45.0%
! AAAATAAGGGTGCAGGGACA+TGG - Chr6:19351550-19351569 MsG0680031375.01.T01:intron 45.0%
! ACAAGGTATCCCACTAAGTG+GGG + Chr6:19351189-19351208 None:intergenic 45.0%
! TGTATCGGTGTTTACACTGC+TGG - Chr6:19351206-19351225 MsG0680031375.01.T01:intron 45.0%
! TTGGGTGGTTTGGACATGTA+GGG - Chr6:19351031-19351050 MsG0680031375.01.T01:intron 45.0%
!! AAGTGTCCGAGAAGTGTCTA+AGG - Chr6:19353186-19353205 MsG0680031375.01.T01:intron 45.0%
!! ATGTCGCCGATTCTACATAG+TGG - Chr6:19351993-19352012 MsG0680031375.01.T01:intron 45.0%
!! CGGTTTTGTAGGGTTCAGTT+AGG - Chr6:19353868-19353887 MsG0680031375.01.T01:intron 45.0%
!! CTAGTCTTACCACACACTCA+AGG + Chr6:19349796-19349815 None:intergenic 45.0%
!! TTGTTGGGTCACTTGCTATC+GGG - Chr6:19353730-19353749 MsG0680031375.01.T01:intron 45.0%
!!! CCACCCCAAACTTTTTTGTC+TGG + Chr6:19350000-19350019 None:intergenic 45.0%
!!! GTTTTGATTCTCTACGGTGC+AGG - Chr6:19349368-19349387 MsG0680031375.01.T01:intron 45.0%
!! TTCAAATAAATAAAATTAAA+AGG - Chr6:19355129-19355148 MsG0680031375.01.T01:CDS 5.0%
!!! ACTTTAAAAAAAAAAAATTA+AGG + Chr6:19354841-19354860 None:intergenic 5.0%
AACCCAGTGCCATATAGGTG+TGG + Chr6:19354532-19354551 None:intergenic 50.0%
AAGCTTCAGTCAGCCACCAA+AGG + Chr6:19352777-19352796 None:intergenic 50.0%
ACATGGCTGTGAGCATGCAA+GGG - Chr6:19351567-19351586 MsG0680031375.01.T01:intron 50.0%
AGAGATGGAACTGTTGCTGC+AGG - Chr6:19355472-19355491 MsG0680031375.01.T01:five_prime_UTR 50.0%
AGTCATCCGATCTTGATCCG+TGG + Chr6:19355209-19355228 None:intergenic 50.0%
AGTGTGATCTGTCTCACCGA+AGG - Chr6:19354158-19354177 MsG0680031375.01.T01:intron 50.0%
ATAATTGGGGGATTCCCCAC+CGG + Chr6:19351495-19351514 None:intergenic 50.0%
ATACTACAGAGGAGCAGCAG+GGG - Chr6:19352329-19352348 MsG0680031375.01.T01:intron 50.0%
ATCACTAGAGGTAGAGGCAG+TGG - Chr6:19349969-19349988 MsG0680031375.01.T01:intron 50.0%
ATGCCACACCTATATGGCAC+TGG - Chr6:19354526-19354545 MsG0680031375.01.T01:intron 50.0%
ATGTAGTCGACCCCACTTAG+TGG - Chr6:19351176-19351195 MsG0680031375.01.T01:intron 50.0%
ATTCTCTACGGTGCAGGTGT+AGG - Chr6:19349374-19349393 MsG0680031375.01.T01:intron 50.0%
CAACACACCCTCTCATGCTT+AGG + Chr6:19353776-19353795 None:intergenic 50.0%
CATACTACAGAGGAGCAGCA+GGG - Chr6:19352328-19352347 MsG0680031375.01.T01:intron 50.0%
CTTGTTAAGATCCGGTTCCC+TGG + Chr6:19350583-19350602 None:intergenic 50.0%
GAAGAGGTAGTCGTACGACA+TGG + Chr6:19349251-19349270 None:intergenic 50.0%
GACATTAGAGAGAGGGGTTC+GGG - Chr6:19349835-19349854 MsG0680031375.01.T01:intron 50.0%
GACGTCTCATGTTCCGACTT+TGG + Chr6:19355267-19355286 None:intergenic 50.0%
GAGGGGAGTCAAATCACTAG+AGG - Chr6:19349957-19349976 MsG0680031375.01.T01:intron 50.0%
GCATGCAGAGAGAAAACCTG+TGG - Chr6:19349905-19349924 MsG0680031375.01.T01:intron 50.0%
GGAGGGAGAGCAATTTGCAA+AGG - Chr6:19354195-19354214 MsG0680031375.01.T01:intron 50.0%
GGTCTCATGCCACACCTATA+TGG - Chr6:19354520-19354539 MsG0680031375.01.T01:intron 50.0%
GTCATCCGATCTTGATCCGT+GGG + Chr6:19355208-19355227 None:intergenic 50.0%
GTCCAGTCCTAAGCATGAGA+GGG - Chr6:19353766-19353785 MsG0680031375.01.T01:intron 50.0%
GTGTGATCTGTCTCACCGAA+GGG - Chr6:19354159-19354178 MsG0680031375.01.T01:intron 50.0%
TCATACTACAGAGGAGCAGC+AGG - Chr6:19352327-19352346 MsG0680031375.01.T01:intron 50.0%
TGCCACACCTATATGGCACT+GGG - Chr6:19354527-19354546 MsG0680031375.01.T01:intron 50.0%
TGGAGACGAAGATGTTGCGT+TGG - Chr6:19350907-19350926 MsG0680031375.01.T01:intron 50.0%
TGTAGTCGACCCCACTTAGT+GGG - Chr6:19351177-19351196 MsG0680031375.01.T01:intron 50.0%
TTCTCTACGGTGCAGGTGTA+GGG - Chr6:19349375-19349394 MsG0680031375.01.T01:intron 50.0%
! CTTGGGTGGTTTGGACATGT+AGG - Chr6:19351030-19351049 MsG0680031375.01.T01:intron 50.0%
! GTTTTCCAATCCCTCATCCG+AGG - Chr6:19353475-19353494 MsG0680031375.01.T01:intron 50.0%
!! CCCGTGTGGTGTTATGTATG+AGG - Chr6:19353989-19354008 MsG0680031375.01.T01:intron 50.0%
!! TCGCTGTTTTACGGGAGTGT+TGG - Chr6:19349714-19349733 MsG0680031375.01.T01:intron 50.0%
!!! CGCTGTTTTACGGGAGTGTT+GGG - Chr6:19349715-19349734 MsG0680031375.01.T01:intron 50.0%
!!! TGTTTTACGGGAGTGTTGGG+CGG - Chr6:19349718-19349737 MsG0680031375.01.T01:intron 50.0%
AATGGAGCAGGAGAGATGGC+AGG + Chr6:19350338-19350357 None:intergenic 55.0%
ACTAGAGGTAGAGGCAGTGG+CGG - Chr6:19349972-19349991 MsG0680031375.01.T01:intron 55.0%
ACTCCTCCAGAGTGAAGGGA+GGG + Chr6:19352696-19352715 None:intergenic 55.0%
CACCCTCTCATGCTTAGGAC+TGG + Chr6:19353771-19353790 None:intergenic 55.0%
CACTACAGCTCCTCGGATGA+GGG + Chr6:19353488-19353507 None:intergenic 55.0%
CGTCCAGTCCTAAGCATGAG+AGG - Chr6:19353765-19353784 MsG0680031375.01.T01:intron 55.0%
CTGACGGCAGAAAATGGAGC+AGG + Chr6:19350350-19350369 None:intergenic 55.0%
CTTGATCCGTGGGCCAAGAT+AGG + Chr6:19355198-19355217 None:intergenic 55.0%
CTTGGCCCACGGATCAAGAT+CGG - Chr6:19355200-19355219 MsG0680031375.01.T01:intron 55.0%
GACATGGCTGTGAGCATGCA+AGG - Chr6:19351566-19351585 MsG0680031375.01.T01:intron 55.0%
GATGGAACTGTTGCTGCAGG+AGG - Chr6:19355475-19355494 MsG0680031375.01.T01:five_prime_UTR 55.0%
GTTGGCTATGGACGTCCACA+AGG - Chr6:19355436-19355455 MsG0680031375.01.T01:five_prime_UTR 55.0%
TATTTAGGGGTGGGGAGGGT+GGG + Chr6:19353928-19353947 None:intergenic 55.0%
TGATCTGTCTCACCGAAGGG+CGG - Chr6:19354162-19354181 MsG0680031375.01.T01:intron 55.0%
TTATTTAGGGGTGGGGAGGG+TGG + Chr6:19353929-19353948 None:intergenic 55.0%
TTCCATCTCTGCCTCCTGCT+TGG + Chr6:19355462-19355481 None:intergenic 55.0%
! ATTTGAAGATGGGGTGGCGG+TGG - Chr6:19350640-19350659 MsG0680031375.01.T01:intron 55.0%
! CAAGTTGGCTGGAAGATGCG+CGG - Chr6:19354092-19354111 MsG0680031375.01.T01:intron 55.0%
AACCCCTCCCTTCACTCTGG+AGG - Chr6:19352690-19352709 MsG0680031375.01.T01:intron 60.0%
AAGGGCGGTGAGCAAAGAGG+AGG - Chr6:19354177-19354196 MsG0680031375.01.T01:intron 60.0%
AGGGCGGTGAGCAAAGAGGA+GGG - Chr6:19354178-19354197 MsG0680031375.01.T01:intron 60.0%
ATTTAGGGGTGGGGAGGGTG+GGG + Chr6:19353927-19353946 None:intergenic 60.0%
CAGCTCCTCGGATGAGGGAT+TGG + Chr6:19353483-19353502 None:intergenic 60.0%
CAGTCGCCTATCTTGGCCCA+CGG - Chr6:19355189-19355208 MsG0680031375.01.T01:intron 60.0%
CCACTGGGTAGAGGAAGACC+TGG - Chr6:19350689-19350708 MsG0680031375.01.T01:intron 60.0%
CCAGCAGCACTACAGCTCCT+CGG + Chr6:19353495-19353514 None:intergenic 60.0%
CCAGGTCTTCCTCTACCCAG+TGG + Chr6:19350692-19350711 None:intergenic 60.0%
CCTCTTTGCTCACCGCCCTT+CGG + Chr6:19354177-19354196 None:intergenic 60.0%
CTCCTCCAGAGTGAAGGGAG+GGG + Chr6:19352695-19352714 None:intergenic 60.0%
GACTCCTCCAGAGTGAAGGG+AGG + Chr6:19352697-19352716 None:intergenic 60.0%
GCACTACAGCTCCTCGGATG+AGG + Chr6:19353489-19353508 None:intergenic 60.0%
GGTCTTCCTCTACCCAGTGG+CGG + Chr6:19350689-19350708 None:intergenic 60.0%
TCATGTAGCAGCAGCAGCCG+CGG + Chr6:19350474-19350493 None:intergenic 60.0%
CCGAAGGGCGGTGAGCAAAG+AGG - Chr6:19354174-19354193 MsG0680031375.01.T01:intron 65.0%
CCGAGGAGCTGTAGTGCTGC+TGG - Chr6:19353492-19353511 MsG0680031375.01.T01:intron 65.0%
CGTCCACAAGGCCAAGCAGG+AGG - Chr6:19355448-19355467 MsG0680031375.01.T01:five_prime_UTR 65.0%
GGACGTCCACAAGGCCAAGC+AGG - Chr6:19355445-19355464 MsG0680031375.01.T01:five_prime_UTR 65.0%
GGCCAAGCAGGAGGCAGAGA+TGG - Chr6:19355457-19355476 MsG0680031375.01.T01:five_prime_UTR 65.0%
GGGAACCCCTCCCTTCACTC+TGG - Chr6:19352687-19352706 MsG0680031375.01.T01:intron 65.0%
TTTAGGGGTGGGGAGGGTGG+GGG + Chr6:19353926-19353945 None:intergenic 65.0%
! TCTACCCAGTGGCGGAGCCA+GGG + Chr6:19350681-19350700 None:intergenic 65.0%
!! CTGCCTCCTGCTTGGCCTTG+TGG + Chr6:19355454-19355473 None:intergenic 65.0%
AGCAGCAGCCGCGGCGTTTG+TGG + Chr6:19350465-19350484 None:intergenic 70.0%
AGCCGCGGCGTTTGTGGCGA+CGG + Chr6:19350459-19350478 None:intergenic 70.0%
CACCGTCGCCACAAACGCCG+CGG - Chr6:19350454-19350473 MsG0680031375.01.T01:CDS 70.0%
CTGGCTCCGCCACTGGGTAG+AGG - Chr6:19350680-19350699 MsG0680031375.01.T01:intron 70.0%
! AGGGTGGGGGTGGGGAGCAT+AGG + Chr6:19353913-19353932 None:intergenic 70.0%
! CTACCCAGTGGCGGAGCCAG+GGG + Chr6:19350680-19350699 None:intergenic 70.0%
! CTCTACCCAGTGGCGGAGCC+AGG + Chr6:19350682-19350701 None:intergenic 70.0%
! TACCCAGTGGCGGAGCCAGG+GGG + Chr6:19350679-19350698 None:intergenic 70.0%
CACCCCCTGGCTCCGCCACT+GGG - Chr6:19350674-19350693 MsG0680031375.01.T01:intron 75.0%
CGGAGCCAGGGGGTGGCAAG+GGG + Chr6:19350669-19350688 None:intergenic 75.0%
GCGGAGCCAGGGGGTGGCAA+GGG + Chr6:19350670-19350689 None:intergenic 75.0%
GGAGCCAGGGGGTGGCAAGG+GGG + Chr6:19350668-19350687 None:intergenic 75.0%
! AGGGGTGGGGAGGGTGGGGG+TGG + Chr6:19353923-19353942 None:intergenic 80.0%
! CCACCCCCTGGCTCCGCCAC+TGG - Chr6:19350673-19350692 MsG0680031375.01.T01:intron 80.0%
! GGCGGAGCCAGGGGGTGGCA+AGG + Chr6:19350671-19350690 None:intergenic 80.0%
! GGCTCCCCCTTGCCACCCCC+TGG - Chr6:19350661-19350680 MsG0680031375.01.T01:intron 80.0%
! GGGGTGGGGAGGGTGGGGGT+GGG + Chr6:19353922-19353941 None:intergenic 80.0%
! GGGTGGGGAGGGTGGGGGTG+GGG + Chr6:19353921-19353940 None:intergenic 80.0%
!! CCAGTGGCGGAGCCAGGGGG+TGG + Chr6:19350676-19350695 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr6 gene 19349035 19355513 19349035 ID=MsG0680031375.01;Name=MsG0680031375.01
Chr6 mRNA 19349035 19355513 19349035 ID=MsG0680031375.01.T01;Parent=MsG0680031375.01;Name=MsG0680031375.01.T01;_AED=0.49;_eAED=0.54;_QI=215|0.8|0.66|1|0.8|0.66|6|0|256
Chr6 exon 19349035 19349199 19349035 ID=MsG0680031375.01.T01:exon:12797;Parent=MsG0680031375.01.T01
Chr6 exon 19350028 19350159 19350028 ID=MsG0680031375.01.T01:exon:12796;Parent=MsG0680031375.01.T01
Chr6 exon 19350275 19350479 19350275 ID=MsG0680031375.01.T01:exon:12795;Parent=MsG0680031375.01.T01
Chr6 exon 19352172 19352254 19352172 ID=MsG0680031375.01.T01:exon:12794;Parent=MsG0680031375.01.T01
Chr6 exon 19355019 19355158 19355019 ID=MsG0680031375.01.T01:exon:12793;Parent=MsG0680031375.01.T01
Chr6 exon 19355253 19355513 19355253 ID=MsG0680031375.01.T01:exon:12792;Parent=MsG0680031375.01.T01
Chr6 five_prime_UTR 19355299 19355513 19355299 ID=MsG0680031375.01.T01:five_prime_utr;Parent=MsG0680031375.01.T01
Chr6 CDS 19355253 19355298 19355253 ID=MsG0680031375.01.T01:cds;Parent=MsG0680031375.01.T01
Chr6 CDS 19355019 19355158 19355019 ID=MsG0680031375.01.T01:cds;Parent=MsG0680031375.01.T01
Chr6 CDS 19352172 19352254 19352172 ID=MsG0680031375.01.T01:cds;Parent=MsG0680031375.01.T01
Chr6 CDS 19350275 19350479 19350275 ID=MsG0680031375.01.T01:cds;Parent=MsG0680031375.01.T01
Chr6 CDS 19350028 19350159 19350028 ID=MsG0680031375.01.T01:cds;Parent=MsG0680031375.01.T01
Chr6 CDS 19349035 19349199 19349035 ID=MsG0680031375.01.T01:cds;Parent=MsG0680031375.01.T01
Gene Sequence

>MsG0680031375.01.T01

ATGTCGTACGACTACCTCTTCAAGTACATCATCATCGGTGACACAGGTGTAGGGAAATCTTGTTTGCTCCTTCAGTTCACTGATAAGAGGTTTCAACCTGTTCATGATCTTACTATTGGTGTTGAGTTTGGTGCTCGTATGCTTACTATTGATTCTAGGCCGATTAAGCTTCAGATATGGGATACTGCTGGGCAAGAATCTTTTAGATCCATCACTAGATCATACTACAGAGGAGCAGCAGGGGCACTTCTAGTTTATGACATTACAAGGAGAGAGACATTTAATCATTTAGCAAGTTGGCTGGAAGATGCGCGGCAGCATGCCAATCCTAATATGACAATCACACTCATAGGGAACAAGTGTGATCTGTCTCACCGAAGGGCGGTGAGCAAAGAGGAGGGAGAGCAATTTGCAAAGGAAAATGGACTTTTATTCATGGAGGCTTCTGCCAAGACAGCACAAAATGTGGAAGAGGCTTTCATAAAAACTGCTGCAAAGATTCTTCAGAACATCCAAGATGGTGTCTTTGATGTGTCCAATGAGGTAACTATCTACAGTCAGTTCAATGTAAACAGATGCGCAAAATTAGTTGTGATGATTGCATTGAGTATCTGGCCTATTTTCCTGTTACCTAATGTTTCCTTTTGGCTAAAATTTTCAATGAATCTATTATTGCAGACATGTGGTATAAAAGTTGGCTATGGACGTCCACAAGGCCAAGCAGGAGGCAGAGATGGAACTGTTGCTGCAGGAGGTGCATGTTGCAGCTGA
Protein sequence

>MsG0680031375.01.T01

MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMLTIDSRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTITLIGNKCDLSHRRAVSKEEGEQFAKENGLLFMEASAKTAQNVEEAFIKTAAKILQNIQDGVFDVSNEVTIYSQFNVNRCAKLVVMIALSIWPIFLLPNVSFWLKFSMNLLLQTCGIKVGYGRPQGQAGGRDGTVAAGGACCS*