AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780041016.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041016.01.T01 MTR_7g103070 97.765 179 4 0 1 179 1 179 9.31e-126 353
MsG0780041016.01.T01 MTR_1g062760 86.228 167 22 1 13 179 11 176 2.99e-101 291
MsG0780041016.01.T01 MTR_1g090717 72.778 180 47 2 1 179 1 179 5.06e-91 265
MsG0780041016.01.T01 MTR_8g093740 70.391 179 49 2 1 179 1 175 4.12e-90 263
MsG0780041016.01.T01 MTR_1g029450 72.892 166 44 1 14 179 15 179 6.75e-89 260
MsG0780041016.01.T01 MTR_3g096350 72.892 166 44 1 14 179 10 174 1.06e-88 259
MsG0780041016.01.T01 MTR_7g103070 98.361 122 2 0 58 179 2 123 4.92e-84 246
MsG0780041016.01.T01 MTR_8g093740 74.074 135 35 0 45 179 8 142 1.57e-73 219
MsG0780041016.01.T01 MTR_3g096350 77.236 123 27 1 13 135 9 130 7.00e-67 202
MsG0780041016.01.T01 MTR_3g096350 74.615 130 30 2 14 141 10 138 9.83e-67 201
MsG0780041016.01.T01 MTR_7g081700 54.762 168 74 2 13 180 5 170 2.21e-58 182
MsG0780041016.01.T01 MTR_8g006970 51.124 178 84 3 13 190 5 179 3.66e-56 176
MsG0780041016.01.T01 MTR_8g006970 52.695 167 77 2 14 180 20 184 4.62e-55 174
MsG0780041016.01.T01 MTR_1g068740 52.632 171 78 3 11 180 10 178 1.95e-54 172
MsG0780041016.01.T01 MTR_1g068730 52.047 171 79 3 11 180 10 178 4.96e-54 171
MsG0780041016.01.T01 MTR_1g115325 52.663 169 77 3 13 180 12 178 6.39e-54 171
MsG0780041016.01.T01 MTR_7g100020 52.663 169 77 3 13 180 12 178 1.83e-53 170
MsG0780041016.01.T01 MTR_2g005500 52.047 171 80 2 10 180 3 171 5.08e-53 169
MsG0780041016.01.T01 MTR_8g031870 49.091 165 82 2 16 180 6 168 1.05e-50 162
MsG0780041016.01.T01 MTR_6g021790 50.888 169 77 4 13 179 3 167 3.35e-50 162
MsG0780041016.01.T01 MTR_2g027660 51.852 162 72 4 17 176 7 164 6.86e-49 158
MsG0780041016.01.T01 MTR_4g063160 50.292 171 80 4 13 180 12 180 1.54e-48 157
MsG0780041016.01.T01 MTR_2g096550 46.857 175 90 3 12 185 11 183 1.75e-48 157
MsG0780041016.01.T01 MTR_8g031660 50.000 164 80 2 13 176 3 164 3.41e-48 156
MsG0780041016.01.T01 MTR_8g031680 46.951 164 85 2 13 176 3 164 6.16e-48 156
MsG0780041016.01.T01 MTR_4g064897 48.503 167 84 2 13 179 9 173 3.26e-47 154
MsG0780041016.01.T01 MTR_8g031830 47.742 155 79 2 16 170 6 158 6.80e-45 147
MsG0780041016.01.T01 MTR_2g014990 49.102 167 83 2 13 179 10 174 3.18e-44 147
MsG0780041016.01.T01 MTR_4g099470 52.632 133 61 2 48 180 16 146 4.20e-44 145
MsG0780041016.01.T01 MTR_2g075950 48.837 172 84 3 13 184 10 177 4.45e-44 146
MsG0780041016.01.T01 MTR_3g069510 47.305 167 86 2 13 179 9 173 5.32e-44 146
MsG0780041016.01.T01 MTR_2g083860 50.307 163 79 2 13 175 10 170 6.76e-44 145
MsG0780041016.01.T01 MTR_2g005510 49.068 161 80 2 13 173 12 170 1.06e-43 145
MsG0780041016.01.T01 MTR_1g068730 49.007 151 74 3 11 160 10 158 1.14e-43 144
MsG0780041016.01.T01 MTR_1g068740 49.669 151 73 3 11 160 10 158 1.62e-43 144
MsG0780041016.01.T01 MTR_7g051940 49.682 157 77 2 17 173 14 168 2.00e-43 144
MsG0780041016.01.T01 MTR_8g089985 45.087 173 92 3 1 172 1 171 2.09e-43 145
MsG0780041016.01.T01 MTR_6g079550 48.503 167 84 2 14 180 10 174 3.28e-43 144
MsG0780041016.01.T01 MTR_3g086980 44.444 171 92 3 3 172 2 170 3.88e-43 144
MsG0780041016.01.T01 MTR_1g078200 45.509 167 89 2 13 179 11 175 5.67e-43 144
MsG0780041016.01.T01 MTR_4g088090 47.904 167 85 2 13 179 10 174 7.76e-43 143
MsG0780041016.01.T01 MTR_4g079350 47.904 167 85 2 13 179 10 174 1.06e-42 142
MsG0780041016.01.T01 MTR_8g036220 45.930 172 91 2 1 172 1 170 1.78e-42 142
MsG0780041016.01.T01 MTR_8g027220 46.296 162 85 2 14 175 24 183 7.53e-42 141
MsG0780041016.01.T01 MTR_0262s0050 45.029 171 90 3 14 184 13 179 9.83e-42 140
MsG0780041016.01.T01 MTR_1g052475 43.860 171 92 3 14 184 13 179 1.77e-40 137
MsG0780041016.01.T01 MTR_7g405790 47.134 157 81 2 17 173 16 170 1.78e-40 137
MsG0780041016.01.T01 MTR_2g090865 46.707 167 87 2 13 179 8 172 6.59e-40 135
MsG0780041016.01.T01 MTR_5g076590 42.604 169 94 3 12 179 5 171 2.30e-38 131
MsG0780041016.01.T01 MTR_3g064390 40.828 169 97 3 12 179 5 171 4.62e-37 127
MsG0780041016.01.T01 MTR_1g094220 37.640 178 108 3 3 179 18 193 5.89e-37 127
MsG0780041016.01.T01 MTR_7g117910 44.828 145 78 2 14 158 18 160 1.10e-36 127
MsG0780041016.01.T01 MTR_1g094220 36.508 189 115 4 3 188 18 204 1.71e-36 126
MsG0780041016.01.T01 MTR_2g102060 38.889 162 97 2 18 179 12 171 4.41e-36 125
MsG0780041016.01.T01 MTR_1g094220 37.356 174 106 3 3 175 18 189 5.78e-36 125
MsG0780041016.01.T01 MTR_8g107070 47.531 162 83 2 14 175 12 171 8.06e-36 126
MsG0780041016.01.T01 MTR_8g103550 38.788 165 99 2 15 179 8 170 6.33e-35 122
MsG0780041016.01.T01 MTR_1g094220 37.791 172 104 3 3 173 18 187 1.57e-34 122
MsG0780041016.01.T01 MTR_4g098950 38.750 160 96 2 17 176 10 167 4.58e-34 120
MsG0780041016.01.T01 MTR_8g090215 38.125 160 97 2 17 176 10 167 1.92e-33 119
MsG0780041016.01.T01 MTR_5g013900 38.125 160 97 2 17 176 10 167 2.63e-33 118
MsG0780041016.01.T01 MTR_3g087160 37.500 160 98 2 17 176 10 167 1.44e-32 116
MsG0780041016.01.T01 MTR_3g064390 39.073 151 87 4 12 161 5 151 1.29e-28 105
MsG0780041016.01.T01 MTR_2g101890 39.264 163 92 5 17 173 11 172 8.30e-28 104
MsG0780041016.01.T01 MTR_4g069850 36.364 165 98 4 18 176 10 173 1.16e-27 103
MsG0780041016.01.T01 MTR_2g090875 34.483 174 99 5 17 179 7 176 2.53e-27 102
MsG0780041016.01.T01 MTR_4g012940 37.576 165 96 5 18 176 10 173 9.20e-27 101
MsG0780041016.01.T01 MTR_8g092020 37.654 162 94 5 17 172 13 173 2.29e-26 100
MsG0780041016.01.T01 MTR_1g097420 36.810 163 94 5 17 172 9 169 3.31e-26 100
MsG0780041016.01.T01 MTR_4g088055 33.526 173 100 6 18 179 8 176 1.68e-25 98.2
MsG0780041016.01.T01 MTR_6g087980 33.908 174 100 5 17 179 7 176 2.94e-25 97.8
MsG0780041016.01.T01 MTR_4g073250 33.333 174 101 6 17 179 7 176 5.38e-25 96.7
MsG0780041016.01.T01 MTR_3g078260 33.333 168 98 4 17 173 9 173 6.68e-25 97.1
MsG0780041016.01.T01 MTR_8g075240 33.526 173 100 6 18 179 8 176 2.80e-24 95.1
MsG0780041016.01.T01 MTR_5g022600 33.929 168 97 5 17 173 7 171 3.98e-24 94.4
MsG0780041016.01.T01 MTR_1g097420 34.911 169 97 6 11 172 34 196 7.07e-22 89.4
MsG0780041016.01.T01 MTR_3g107707 33.537 164 104 3 16 179 13 171 4.98e-21 87.0
MsG0780041016.01.T01 MTR_3g107717 33.537 164 104 3 16 179 13 171 5.71e-21 87.0
MsG0780041016.01.T01 MTR_2g005500 34.503 171 70 2 10 180 3 131 5.94e-21 85.5
MsG0780041016.01.T01 MTR_3g107713 33.537 164 104 3 16 179 13 171 6.82e-21 86.7
MsG0780041016.01.T01 MTR_6g039490 34.783 161 100 3 17 172 9 169 1.35e-19 83.2
MsG0780041016.01.T01 MTR_3g078260 35.000 120 75 2 18 137 10 126 2.36e-18 78.2
MsG0780041016.01.T01 MTR_8g031810 41.304 92 40 1 17 108 7 84 6.01e-16 70.5
MsG0780041016.01.T01 MTR_1452s0010 43.836 73 40 1 43 115 8 79 8.62e-15 67.8
MsG0780041016.01.T01 MTR_4g113620 29.878 164 101 4 16 179 13 162 1.27e-14 69.7
MsG0780041016.01.T01 MTR_5g092060 28.495 186 120 6 2 179 89 269 4.18e-14 69.3
MsG0780041016.01.T01 MTR_1686s0010 42.647 68 38 1 48 115 13 79 3.13e-13 63.2
MsG0780041016.01.T01 MTR_5g078090 34.000 150 79 8 21 160 24 163 4.91e-13 65.1
MsG0780041016.01.T01 MTR_4g047870 27.647 170 115 3 15 179 90 256 1.43e-12 65.1
MsG0780041016.01.T01 MTR_8g091980 28.369 141 76 3 18 134 23 162 2.41e-11 61.6
MsG0780041016.01.T01 MTR_8g091980 28.369 141 76 3 18 134 23 162 2.64e-11 62.0
MsG0780041016.01.T01 MTR_5g015370 30.864 162 96 8 21 175 24 176 2.88e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780041016.01.T01 AT5G03530 84.916 179 23 2 1 179 1 175 5.90e-107 306
MsG0780041016.01.T01 AT5G03530 84.916 179 23 2 1 179 1 175 5.90e-107 306
MsG0780041016.01.T01 AT1G43890 73.743 179 43 2 1 179 1 175 2.18e-94 274
MsG0780041016.01.T01 AT1G43890 73.743 179 43 2 1 179 1 175 2.18e-94 274
MsG0780041016.01.T01 AT1G43890 73.743 179 43 2 1 179 1 175 2.18e-94 274
MsG0780041016.01.T01 AT3G09910 76.111 180 39 2 1 180 1 176 2.02e-92 268
MsG0780041016.01.T01 AT3G09910 76.111 180 39 2 1 180 1 176 2.02e-92 268
MsG0780041016.01.T01 AT3G09910 75.419 179 40 2 1 179 1 175 5.62e-91 265
MsG0780041016.01.T01 AT3G09910 75.419 179 40 2 1 179 1 175 5.62e-91 265
MsG0780041016.01.T01 AT3G09910 75.419 179 40 2 1 179 1 175 5.62e-91 265
MsG0780041016.01.T01 AT1G02130 53.571 168 76 2 13 180 5 170 9.91e-57 178
MsG0780041016.01.T01 AT4G17530 53.714 175 77 3 13 185 5 177 2.32e-56 177
MsG0780041016.01.T01 AT5G47200 53.714 175 77 3 13 185 5 177 2.40e-56 177
MsG0780041016.01.T01 AT3G11730 53.216 171 78 2 10 180 2 170 2.79e-55 174
MsG0780041016.01.T01 AT5G59840 52.663 169 77 3 13 180 12 178 4.09e-54 172
MsG0780041016.01.T01 AT3G53610 52.663 169 77 3 13 180 12 178 5.73e-54 171
MsG0780041016.01.T01 AT3G53610 52.663 169 77 3 13 180 12 178 5.73e-54 171
MsG0780041016.01.T01 AT3G53610 52.663 169 77 3 13 180 12 178 5.73e-54 171
MsG0780041016.01.T01 AT3G09900 52.632 171 78 3 11 180 10 178 9.30e-54 171
MsG0780041016.01.T01 AT3G46060 52.071 169 78 3 13 180 12 178 6.84e-53 169
MsG0780041016.01.T01 AT3G46060 52.071 169 78 3 13 180 12 178 6.84e-53 169
MsG0780041016.01.T01 AT3G46060 52.071 169 78 3 13 180 12 178 6.84e-53 169
MsG0780041016.01.T01 AT5G03520 52.632 171 78 3 11 180 10 178 7.62e-53 169
MsG0780041016.01.T01 AT4G35860 52.663 169 74 4 13 179 3 167 1.25e-52 168
MsG0780041016.01.T01 AT4G17160 50.909 165 75 4 17 179 7 167 6.63e-50 160
MsG0780041016.01.T01 AT4G17170 50.909 165 75 4 17 179 7 167 3.22e-49 159
MsG0780041016.01.T01 AT1G05810 49.080 163 81 2 17 179 13 173 2.51e-46 152
MsG0780041016.01.T01 AT1G18200 53.459 159 72 2 14 172 11 167 2.92e-46 152
MsG0780041016.01.T01 AT1G05810 49.080 163 81 2 17 179 59 219 8.33e-46 152
MsG0780041016.01.T01 AT2G43130 48.765 162 81 2 12 173 8 167 2.04e-45 149
MsG0780041016.01.T01 AT1G07410 48.466 163 82 2 13 175 9 169 2.65e-45 149
MsG0780041016.01.T01 AT5G59150 49.068 161 80 2 13 173 9 167 7.48e-45 148
MsG0780041016.01.T01 AT3G46830 48.466 163 82 2 13 175 9 169 9.70e-45 148
MsG0780041016.01.T01 AT3G46830 48.466 163 82 2 13 175 9 169 9.70e-45 148
MsG0780041016.01.T01 AT2G31680 47.904 167 85 2 7 173 3 167 1.32e-44 147
MsG0780041016.01.T01 AT3G07410 44.974 189 101 3 6 194 2 187 1.46e-44 147
MsG0780041016.01.T01 AT4G39990 45.783 166 88 2 14 179 15 178 2.26e-44 147
MsG0780041016.01.T01 AT5G47520 46.988 166 86 2 14 179 12 175 2.32e-44 147
MsG0780041016.01.T01 AT1G16920 49.419 172 83 3 13 184 10 177 2.39e-44 147
MsG0780041016.01.T01 AT1G73640 51.572 159 75 2 14 172 11 167 4.07e-44 147
MsG0780041016.01.T01 AT1G09630 48.256 172 85 3 13 184 9 176 5.09e-44 146
MsG0780041016.01.T01 AT2G33870 48.503 167 84 2 13 179 10 174 9.09e-44 145
MsG0780041016.01.T01 AT5G60860 49.693 163 80 2 13 175 10 170 2.10e-43 144
MsG0780041016.01.T01 AT1G28550 47.904 167 85 2 13 179 10 174 2.21e-43 144
MsG0780041016.01.T01 AT5G65270 44.509 173 93 3 1 172 1 171 2.95e-43 144
MsG0780041016.01.T01 AT5G45750 47.619 168 86 2 13 180 10 175 5.71e-43 143
MsG0780041016.01.T01 AT3G15060 49.693 163 80 2 13 175 10 170 6.76e-43 143
MsG0780041016.01.T01 AT3G12160 45.029 171 90 3 14 184 13 179 4.11e-42 141
MsG0780041016.01.T01 AT4G18800 47.305 167 86 2 13 179 10 174 6.29e-42 140
MsG0780041016.01.T01 AT1G06400 47.619 168 86 2 13 180 10 175 7.74e-42 140
MsG0780041016.01.T01 AT4G18430 46.108 167 88 2 13 179 10 174 2.35e-41 139
MsG0780041016.01.T01 AT5G47960 43.860 171 92 3 14 184 13 179 1.72e-40 137
MsG0780041016.01.T01 AT5G03520 51.825 137 63 3 45 180 34 168 4.29e-40 135
MsG0780041016.01.T01 AT4G35860 54.098 122 54 2 58 179 2 121 2.38e-38 130
MsG0780041016.01.T01 AT1G01200 44.375 160 86 3 14 172 26 183 2.83e-38 132
MsG0780041016.01.T01 AT3G54840 38.636 176 105 3 1 175 18 191 1.65e-37 129
MsG0780041016.01.T01 AT3G54840 38.506 174 104 3 1 173 18 189 2.53e-36 125
MsG0780041016.01.T01 AT5G45130 41.667 168 95 3 10 176 3 168 7.59e-36 125
MsG0780041016.01.T01 AT3G54840 40.506 158 91 3 19 175 2 157 8.70e-36 124
MsG0780041016.01.T01 AT4G19640 39.429 175 101 3 5 179 2 171 1.22e-35 124
MsG0780041016.01.T01 AT4G39890 39.375 160 96 1 17 176 10 168 2.08e-35 124
MsG0780041016.01.T01 AT5G45130 42.038 157 89 2 20 176 22 176 9.33e-34 119
MsG0780041016.01.T01 AT2G44610 37.500 160 98 2 17 176 10 167 1.93e-32 116
MsG0780041016.01.T01 AT5G10260 36.875 160 99 2 17 176 10 167 5.82e-32 115
MsG0780041016.01.T01 AT2G22290 37.500 160 98 2 17 176 10 167 3.31e-31 113
MsG0780041016.01.T01 AT5G64990 38.462 156 94 2 17 172 8 161 8.47e-31 112
MsG0780041016.01.T01 AT5G59150 48.276 116 58 2 58 173 3 116 7.24e-30 108
MsG0780041016.01.T01 AT1G22740 37.647 170 96 5 17 177 9 177 6.16e-29 107
MsG0780041016.01.T01 AT2G44690 37.572 173 93 6 18 179 20 188 1.19e-28 106
MsG0780041016.01.T01 AT3G18820 37.349 166 97 4 17 176 9 173 3.06e-28 105
MsG0780041016.01.T01 AT5G64990 36.810 163 94 3 17 172 8 168 5.37e-28 105
MsG0780041016.01.T01 AT4G09720 38.788 165 94 5 18 176 10 173 1.20e-27 103
MsG0780041016.01.T01 AT4G19640 40.741 135 78 2 15 149 9 141 2.53e-27 101
MsG0780041016.01.T01 AT1G52280 37.647 170 99 5 10 173 2 170 4.91e-27 102
MsG0780041016.01.T01 AT3G51300 34.731 167 95 5 18 173 8 171 9.80e-27 101
MsG0780041016.01.T01 AT4G09720 37.427 171 95 5 17 176 9 178 1.01e-26 101
MsG0780041016.01.T01 AT1G49300 36.420 162 96 4 17 172 9 169 1.46e-26 101
MsG0780041016.01.T01 AT1G49300 36.420 162 96 4 17 172 9 169 1.46e-26 101
MsG0780041016.01.T01 AT4G35020 34.682 173 98 6 18 179 8 176 1.51e-26 100
MsG0780041016.01.T01 AT4G35020 34.682 173 98 6 18 179 8 176 1.51e-26 100
MsG0780041016.01.T01 AT4G35020 34.682 173 98 6 18 179 8 176 1.51e-26 100
MsG0780041016.01.T01 AT4G19640 42.520 127 71 2 18 144 12 136 1.96e-26 100
MsG0780041016.01.T01 AT4G09720 36.723 177 94 5 17 176 9 184 2.46e-26 100
MsG0780041016.01.T01 AT2G21880 36.145 166 99 4 17 176 10 174 3.35e-26 100
MsG0780041016.01.T01 AT2G17800 34.731 167 95 5 18 173 8 171 6.28e-26 99.4
MsG0780041016.01.T01 AT2G17800 34.731 167 95 5 18 173 8 171 6.28e-26 99.4
MsG0780041016.01.T01 AT1G20090 32.948 173 101 6 18 179 7 175 1.15e-25 98.6
MsG0780041016.01.T01 AT1G75840 32.948 173 101 6 18 179 8 176 1.60e-25 98.2
MsG0780041016.01.T01 AT4G35950 34.132 167 96 5 18 173 8 171 4.18e-25 97.1
MsG0780041016.01.T01 AT3G48040 33.333 174 101 5 17 179 9 178 5.12e-25 97.1
MsG0780041016.01.T01 AT5G45970 34.132 167 96 5 18 173 8 171 5.33e-25 97.1
MsG0780041016.01.T01 AT4G28950 33.140 172 102 5 17 179 7 174 5.64e-25 97.1
MsG0780041016.01.T01 AT3G16100 36.145 166 99 5 17 176 9 173 7.17e-25 96.7
MsG0780041016.01.T01 AT5G39620 36.905 168 99 4 17 178 6 172 2.53e-24 95.1
MsG0780041016.01.T01 AT5G62880 32.143 168 100 4 17 173 9 173 9.26e-23 91.7
MsG0780041016.01.T01 AT3G48040 32.500 160 94 4 18 166 10 166 2.25e-22 89.7
MsG0780041016.01.T01 AT5G55080 35.542 166 98 6 16 179 13 171 2.89e-22 90.5
MsG0780041016.01.T01 AT4G09720 40.741 135 73 5 48 176 6 139 3.55e-21 86.3
MsG0780041016.01.T01 AT4G09720 40.741 135 73 5 48 176 6 139 3.55e-21 86.3
MsG0780041016.01.T01 AT4G09720 40.741 135 73 5 48 176 6 139 3.55e-21 86.3
MsG0780041016.01.T01 AT5G20020 33.537 164 104 3 16 179 13 171 4.27e-21 87.4
MsG0780041016.01.T01 AT5G55190 33.537 164 104 3 16 179 13 171 5.16e-21 87.0
MsG0780041016.01.T01 AT5G62880 30.688 189 111 6 18 195 10 189 5.83e-21 86.3
MsG0780041016.01.T01 AT5G20010 33.537 164 104 3 16 179 13 171 7.29e-21 86.7
MsG0780041016.01.T01 AT2G21880 37.778 135 77 4 48 176 16 149 3.17e-19 81.6
MsG0780041016.01.T01 AT2G21880 37.778 135 77 4 48 176 16 149 3.17e-19 81.6
MsG0780041016.01.T01 AT4G35020 35.345 116 72 2 18 133 8 120 8.44e-19 79.3
MsG0780041016.01.T01 AT4G35020 35.345 116 72 2 18 133 8 120 8.44e-19 79.3
MsG0780041016.01.T01 AT3G51290 33.803 142 80 5 43 173 634 772 8.36e-17 78.2
MsG0780041016.01.T01 AT2G21880 31.325 166 99 5 17 176 10 166 9.75e-17 75.5
MsG0780041016.01.T01 AT5G46025 38.235 102 62 1 78 179 6 106 4.13e-16 71.2
MsG0780041016.01.T01 AT3G21700 29.508 183 119 4 4 179 93 272 6.57e-13 66.2
MsG0780041016.01.T01 AT5G37680 29.375 160 101 6 21 175 24 176 7.08e-13 64.7
MsG0780041016.01.T01 AT5G09910 32.456 114 63 2 17 117 23 135 1.16e-12 65.9
MsG0780041016.01.T01 AT5G09910 32.456 114 63 2 17 117 23 135 1.16e-12 65.9
MsG0780041016.01.T01 AT5G64813 28.369 141 76 3 18 134 24 163 1.37e-11 62.8
MsG0780041016.01.T01 AT5G64813 28.369 141 76 3 18 134 24 163 1.37e-11 62.8
MsG0780041016.01.T01 AT5G64813 28.369 141 76 3 18 134 24 163 1.37e-11 62.8
MsG0780041016.01.T01 AT3G49860 29.605 152 91 6 21 164 16 159 7.29e-11 58.9

Find 55 sgRNAs with CRISPR-Local

Find 179 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGCCCTAATGTTAGTTAAT+TGG 0.205733 7:+85553129 None:intergenic
ATCTTGTTGATTGGTGATTC+TGG 0.251391 7:-85555886 MsG0780041016.01.T01:CDS
TAAGACAGAAACATCATTAA+AGG 0.274771 7:+85553163 None:intergenic
GTGTTGTGGCTATCTTAAAA+AGG 0.278245 7:+85556005 None:intergenic
AAAGATTAAAACTTACCATT+TGG 0.318307 7:-85555302 MsG0780041016.01.T01:CDS
TAGTAGTAGTAGTAACTAAA+AGG 0.333101 7:+85556062 None:intergenic
AAGATTAAAACTTACCATTT+GGG 0.367846 7:-85555301 MsG0780041016.01.T01:CDS
CTTAGCCCTTGCTAAAGAAC+TGG 0.372774 7:-85553278 MsG0780041016.01.T01:CDS
TCTTTCAAGATCTTGTTGAT+TGG 0.384126 7:-85555895 MsG0780041016.01.T01:CDS
GGAACTCTATTCAACTAATC+AGG 0.391791 7:-85554785 MsG0780041016.01.T01:CDS
AGAAGTGTGGTCTAAGGAAT+TGG 0.405138 7:-85554806 MsG0780041016.01.T01:CDS
TTGATTGGTGATTCTGGTGT+TGG 0.414485 7:-85555880 MsG0780041016.01.T01:CDS
GCCACACTGTTTCTGTAAGT+TGG 0.417467 7:+85556084 None:intergenic
TGGATATATTGCAGCTGGAC+AGG 0.439917 7:-85555106 MsG0780041016.01.T01:intron
CAGCTGGACAGGAAAGGTTC+CGG 0.460899 7:-85555095 MsG0780041016.01.T01:CDS
AAGATCTTCAACAGAGGAGT+TGG 0.478557 7:+85555828 None:intergenic
CTAACAAGTTCTTACTATAG+AGG 0.484550 7:-85555069 MsG0780041016.01.T01:CDS
AAAATGCAATGCCACCCAAT+GGG 0.488928 7:+85556107 None:intergenic
AGATCTTGAAAGAGAGATCA+TGG 0.489933 7:+85555905 None:intergenic
ATCAAAACGCTCACGGTAGG+TGG 0.491465 7:-85555327 MsG0780041016.01.T01:CDS
CACTTCTGACAAGTTTGTAA+AGG 0.493613 7:+85554822 None:intergenic
CTTGTCAGAAGTGTGGTCTA+AGG 0.494158 7:-85554812 MsG0780041016.01.T01:CDS
TGTCTGTGTGTTATGTGTTG+TGG 0.499753 7:+85555991 None:intergenic
CTTTGAAGAACTCGCTCTAA+AGG 0.500370 7:-85553203 MsG0780041016.01.T01:CDS
GAAGATCTTTCACCTACCAT+TGG 0.506624 7:-85555814 MsG0780041016.01.T01:intron
AGTAAGAACTTGTTAGAGTC+CGG 0.513973 7:+85555076 None:intergenic
AAATGAAGTGATACCCCATT+GGG 0.515704 7:-85556121 MsG0780041016.01.T01:five_prime_UTR
GGAGCACAAGGAATCATTCT+CGG 0.521124 7:-85555048 MsG0780041016.01.T01:intron
GTATATACCTGTGTCCCAAA+TGG 0.522502 7:+85555287 None:intergenic
AAACTTACCATTTGGGACAC+AGG 0.524690 7:-85555294 MsG0780041016.01.T01:intron
ATGAGTTCATCATCAGGCTC+TGG 0.529393 7:-85555940 MsG0780041016.01.T01:CDS
AACACCCCAGTTCTTTAGCA+AGG 0.534481 7:+85553272 None:intergenic
TGCTAAAACTCGAGAAAATG+TGG 0.538765 7:-85553233 MsG0780041016.01.T01:CDS
GAAAATGCAATGCCACCCAA+TGG 0.544095 7:+85556106 None:intergenic
TAAATGAAGTGATACCCCAT+TGG 0.545515 7:-85556122 MsG0780041016.01.T01:five_prime_UTR
GAGTGCGTGAAGATGCTAGT+TGG 0.552532 7:-85554763 MsG0780041016.01.T01:CDS
TTAGCCCTTGCTAAAGAACT+GGG 0.569011 7:-85553277 MsG0780041016.01.T01:CDS
TATTACTCAGGATTCTGAGA+GGG 0.575708 7:-85553320 MsG0780041016.01.T01:intron
AGGGCTGTAAGCAGAGAAGA+GGG 0.578470 7:-85553301 MsG0780041016.01.T01:CDS
AAGATCAAAACGCTCACGGT+AGG 0.599927 7:-85555330 MsG0780041016.01.T01:CDS
ACACCCCAGTTCTTTAGCAA+GGG 0.602057 7:+85553273 None:intergenic
TCAAAACGCTCACGGTAGGT+GGG 0.605917 7:-85555326 MsG0780041016.01.T01:CDS
GAGGGCTGTAAGCAGAGAAG+AGG 0.606706 7:-85553302 MsG0780041016.01.T01:CDS
TTCTAGTTTATGATGTCACA+AGG 0.619598 7:-85554852 MsG0780041016.01.T01:intron
GAGTTGTAAATACCAATGGT+AGG 0.627519 7:+85555802 None:intergenic
TTACAAACTTGTCAGAAGTG+TGG 0.645757 7:-85554819 MsG0780041016.01.T01:CDS
TCAGGCTCTGGTCATAGCAG+TGG 0.656173 7:-85555928 MsG0780041016.01.T01:CDS
TGAAGTGATACCCCATTGGG+TGG 0.657814 7:-85556118 MsG0780041016.01.T01:five_prime_UTR
AGGTGAAAGATCTTCAACAG+AGG 0.662959 7:+85555822 None:intergenic
TCTTACTATAGAGGAGCACA+AGG 0.667709 7:-85555060 MsG0780041016.01.T01:CDS
TTATTACTCAGGATTCTGAG+AGG 0.670728 7:-85553321 MsG0780041016.01.T01:intron
AAATGCAATGCCACCCAATG+GGG 0.679046 7:+85556108 None:intergenic
ATATTGCAGCTGGACAGGAA+AGG 0.695869 7:-85555101 MsG0780041016.01.T01:intron
TCCAACTTACAGAAACAGTG+TGG 0.709636 7:-85556085 MsG0780041016.01.T01:five_prime_UTR
TAGCCCTTGCTAAAGAACTG+GGG 0.718721 7:-85553276 MsG0780041016.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTTTATTTTTTTTCTTTTT+TGG - Chr7:85555192-85555211 MsG0780041016.01.T01:intron 10.0%
!!! TTAAATTAAATTAGACATTT+TGG + Chr7:85554124-85554143 None:intergenic 10.0%
!! TTTCACTTATAAAAACTATT+AGG + Chr7:85555072-85555091 None:intergenic 15.0%
!!! AATGTCTAATTTAATTTAAG+TGG - Chr7:85554125-85554144 MsG0780041016.01.T01:intron 15.0%
!!! TGAAATATTTTTTATTGGAT+TGG - Chr7:85554771-85554790 MsG0780041016.01.T01:CDS 15.0%
!!! TGTCTTGAAATATTTTTTAT+TGG - Chr7:85554766-85554785 MsG0780041016.01.T01:CDS 15.0%
!! AAAGATTAAAACTTACCATT+TGG - Chr7:85553975-85553994 MsG0780041016.01.T01:intron 20.0%
!! AAAGTCTATGAAATATTTGT+TGG - Chr7:85555162-85555181 MsG0780041016.01.T01:intron 20.0%
!! AAGATTAAAACTTACCATTT+GGG - Chr7:85553976-85553995 MsG0780041016.01.T01:intron 20.0%
!! AAGTCTATGAAATATTTGTT+GGG - Chr7:85555163-85555182 MsG0780041016.01.T01:intron 20.0%
!! AATCCAATGACATATATAAA+AGG + Chr7:85553670-85553689 None:intergenic 20.0%
!! ATCTTATCTATATGTATCTT+GGG - Chr7:85554316-85554335 MsG0780041016.01.T01:intron 20.0%
!! TCTCATTTCTATTAAGTTAT+TGG - Chr7:85553498-85553517 MsG0780041016.01.T01:intron 20.0%
!!! AATGGATTTTTTTATTGGAT+TGG - Chr7:85554735-85554754 MsG0780041016.01.T01:intron 20.0%
!!! ATATTTTTTATTGGATTGGT+TGG - Chr7:85554775-85554794 MsG0780041016.01.T01:CDS 20.0%
!!! ATTGACTTATAAAATAGCAT+TGG - Chr7:85554151-85554170 MsG0780041016.01.T01:intron 20.0%
!!! TAAAAGAGTATTTTTCAAGT+AGG - Chr7:85555426-85555445 MsG0780041016.01.T01:intron 20.0%
!!! TACTTGAAAAATACTCTTTT+AGG + Chr7:85555427-85555446 None:intergenic 20.0%
!!! TAGAGAATGGATTTTTTTAT+TGG - Chr7:85554730-85554749 MsG0780041016.01.T01:intron 20.0%
!!! TAGTTGTTATTTTGTTAGTA+GGG - Chr7:85555227-85555246 MsG0780041016.01.T01:intron 20.0%
!!! TTAGTTGTTATTTTGTTAGT+AGG - Chr7:85555226-85555245 MsG0780041016.01.T01:intron 20.0%
! AAGAAAAAAAATAAAACGGC+TGG + Chr7:85555189-85555208 None:intergenic 25.0%
! AGATTAAAGCAACATAGTTA+AGG + Chr7:85553871-85553890 None:intergenic 25.0%
! ATATCTACATGTACATAAAC+TGG + Chr7:85554260-85554279 None:intergenic 25.0%
! ATCAGATATACAATTGTATG+TGG - Chr7:85555566-85555585 MsG0780041016.01.T01:intron 25.0%
! CTATTATAAGAAAAGTCTTC+TGG + Chr7:85554657-85554676 None:intergenic 25.0%
! GATCTTATCTATATGTATCT+TGG - Chr7:85554315-85554334 MsG0780041016.01.T01:intron 25.0%
! TAAGACAGAAACATCATTAA+AGG + Chr7:85556117-85556136 None:intergenic 25.0%
! TAGATATGTTAAATTCTTCC+AGG - Chr7:85554623-85554642 MsG0780041016.01.T01:intron 25.0%
! TAGTAGTAGTAGTAACTAAA+AGG + Chr7:85553218-85553237 None:intergenic 25.0%
! TATCTACATGTACATAAACT+GGG + Chr7:85554259-85554278 None:intergenic 25.0%
! TCTTAAAAAGGAATAGTGAA+AGG + Chr7:85553263-85553282 None:intergenic 25.0%
! TGTAATCTAAAGATATACGA+CGG - Chr7:85553762-85553781 MsG0780041016.01.T01:intron 25.0%
!! CATTTTGAATAGTAATGTGA+GGG + Chr7:85555540-85555559 None:intergenic 25.0%
!! TCATTTTGAATAGTAATGTG+AGG + Chr7:85555541-85555560 None:intergenic 25.0%
!!! AGTTGTTATTTTGTTAGTAG+GGG - Chr7:85555228-85555247 MsG0780041016.01.T01:intron 25.0%
!!! GATTTTTTTATTGGATTGGT+AGG - Chr7:85554739-85554758 MsG0780041016.01.T01:intron 25.0%
AAAATTCATCTATCTCCACA+AGG + Chr7:85555734-85555753 None:intergenic 30.0%
AAGCAATGTTATCGTAAGTA+AGG + Chr7:85555459-85555478 None:intergenic 30.0%
AATGACATTTGTGCTAAATG+AGG + Chr7:85555767-85555786 None:intergenic 30.0%
ACCTATCTTAAGTATGCTTT+AGG - Chr7:85554954-85554973 MsG0780041016.01.T01:intron 30.0%
AGAAAAATGAGTTCATCATC+AGG - Chr7:85553331-85553350 MsG0780041016.01.T01:intron 30.0%
AGCAATGTTATCGTAAGTAA+GGG + Chr7:85555458-85555477 None:intergenic 30.0%
AGGAATATCACATTGAACAT+GGG + Chr7:85555407-85555426 None:intergenic 30.0%
CATATGATTTACAGTTCTAC+TGG - Chr7:85555686-85555705 MsG0780041016.01.T01:intron 30.0%
CTAACAAGTTCTTACTATAG+AGG - Chr7:85554208-85554227 MsG0780041016.01.T01:intron 30.0%
GATCTTAAAATCAACACCTA+CGG + Chr7:85553933-85553952 None:intergenic 30.0%
GCTCAGTCTTAATATTAAGA+TGG - Chr7:85555135-85555154 MsG0780041016.01.T01:intron 30.0%
GGAGCAAAACAATTAAACAA+TGG + Chr7:85553649-85553668 None:intergenic 30.0%
TACAAACCATATGAAAGACA+AGG + Chr7:85554999-85555018 None:intergenic 30.0%
TAGGAATATCACATTGAACA+TGG + Chr7:85555408-85555427 None:intergenic 30.0%
TCTGAGTTTATGATTACCAT+AGG - Chr7:85554705-85554724 MsG0780041016.01.T01:intron 30.0%
TCTTTCAAGATCTTGTTGAT+TGG - Chr7:85553382-85553401 MsG0780041016.01.T01:intron 30.0%
TGTAAATCATATGCTCAAGT+TGG + Chr7:85555679-85555698 None:intergenic 30.0%
TGTATGTCATCAGAATATCA+CGG + Chr7:85555503-85555522 None:intergenic 30.0%
TGTTTCATCATTGAATCTGT+TGG - Chr7:85553613-85553632 MsG0780041016.01.T01:intron 30.0%
TTGTCATTAGTTCCAATGAA+TGG + Chr7:85554866-85554885 None:intergenic 30.0%
TTGTCTATTTCACCATTCAT+TGG - Chr7:85554851-85554870 MsG0780041016.01.T01:intron 30.0%
! ATGTGAGATTTTCACATGAT+TGG - Chr7:85555900-85555919 MsG0780041016.01.T01:CDS 30.0%
! GCTCCTTTTATATATGTCAT+TGG - Chr7:85553664-85553683 MsG0780041016.01.T01:intron 30.0%
! GTTATTTCATTGTCTAAACG+TGG + Chr7:85554822-85554841 None:intergenic 30.0%
!! CTCTAAAGGTACGATTTTAT+AGG - Chr7:85556088-85556107 MsG0780041016.01.T01:five_prime_UTR 30.0%
!! TTCTAGTTTATGATGTCACA+AGG - Chr7:85554425-85554444 MsG0780041016.01.T01:intron 30.0%
!!! AAGAGTATTTTTCAAGTAGG+AGG - Chr7:85555429-85555448 MsG0780041016.01.T01:intron 30.0%
!!! TTTTAAGATCAAAACGCTCA+CGG - Chr7:85553943-85553962 MsG0780041016.01.T01:intron 30.0%
AAAGACAAGGTCTTCTAAGT+TGG + Chr7:85554986-85555005 None:intergenic 35.0%
AAATCCATTCTCTATGCCTA+TGG + Chr7:85554724-85554743 None:intergenic 35.0%
AAATGAAGTGATACCCCATT+GGG - Chr7:85553156-85553175 MsG0780041016.01.T01:CDS 35.0%
ACACAGGTCTAATTTCATGA+AGG + Chr7:85554045-85554064 None:intergenic 35.0%
ACATAGGAGTTGGAATGATA+AGG + Chr7:85555272-85555291 None:intergenic 35.0%
ACGAATGTGTGAAAAATGAC+AGG - Chr7:85554597-85554616 MsG0780041016.01.T01:intron 35.0%
AGAAGACCTTGTCTTTCATA+TGG - Chr7:85554990-85555009 MsG0780041016.01.T01:intron 35.0%
AGATCTTGAAAGAGAGATCA+TGG + Chr7:85553375-85553394 None:intergenic 35.0%
ATTACCATAGGCATAGAGAA+TGG - Chr7:85554717-85554736 MsG0780041016.01.T01:intron 35.0%
ATTGCACATAGCAATAGCAT+AGG - Chr7:85555791-85555810 MsG0780041016.01.T01:intron 35.0%
CACAGGTCTAATTTCATGAA+GGG + Chr7:85554044-85554063 None:intergenic 35.0%
CACTTCTGACAAGTTTGTAA+AGG + Chr7:85554458-85554477 None:intergenic 35.0%
CTAACACCACTCTACAAAAT+CGG + Chr7:85555115-85555134 None:intergenic 35.0%
CTAATGTGTGTCTAAAAGTG+AGG + Chr7:85555832-85555851 None:intergenic 35.0%
CTGTCATCTAATATCTGCTA+TGG - Chr7:85555932-85555951 MsG0780041016.01.T01:CDS 35.0%
GAGAGAGTTGTAAATACCAA+TGG + Chr7:85553482-85553501 None:intergenic 35.0%
GAGTTGTAAATACCAATGGT+AGG + Chr7:85553478-85553497 None:intergenic 35.0%
GCCTAAAGCATACTTAAGAT+AGG + Chr7:85554958-85554977 None:intergenic 35.0%
GGAACTCTATTCAACTAATC+AGG - Chr7:85554492-85554511 MsG0780041016.01.T01:intron 35.0%
GTGTTGTGGCTATCTTAAAA+AGG + Chr7:85553275-85553294 None:intergenic 35.0%
TAAATGAAGTGATACCCCAT+TGG - Chr7:85553155-85553174 MsG0780041016.01.T01:CDS 35.0%
TAGCTAGATCAAGAATCAAG+AGG + Chr7:85553530-85553549 None:intergenic 35.0%
TATGCTATTGCTATGTGCAA+TGG + Chr7:85555792-85555811 None:intergenic 35.0%
TCATTGAATCTGTTGGCAAT+AGG - Chr7:85553620-85553639 MsG0780041016.01.T01:intron 35.0%
TCTGCTATGGTTTATTACTC+AGG - Chr7:85555945-85555964 MsG0780041016.01.T01:exon 35.0%
TGCTAAAACTCGAGAAAATG+TGG - Chr7:85556044-85556063 MsG0780041016.01.T01:five_prime_UTR 35.0%
TTACAAACTTGTCAGAAGTG+TGG - Chr7:85554458-85554477 MsG0780041016.01.T01:intron 35.0%
TTATTACTCAGGATTCTGAG+AGG - Chr7:85555956-85555975 MsG0780041016.01.T01:exon 35.0%
TTGTTCTTCCTGAGAAATTG+TGG - Chr7:85554288-85554307 MsG0780041016.01.T01:intron 35.0%
! AGTATTACACTGCCATTTAG+AGG - Chr7:85555632-85555651 MsG0780041016.01.T01:intron 35.0%
! ATCTTGTTGATTGGTGATTC+TGG - Chr7:85553391-85553410 MsG0780041016.01.T01:intron 35.0%
! CAAATGATAGTGCCTCTAAA+TGG + Chr7:85555647-85555666 None:intergenic 35.0%
! TATTACTCAGGATTCTGAGA+GGG - Chr7:85555957-85555976 MsG0780041016.01.T01:exon 35.0%
! TGAGATTTTCACATGATTGG+TGG - Chr7:85555903-85555922 MsG0780041016.01.T01:CDS 35.0%
!! AAAAGGTGGCTTGTAGTTTT+GGG + Chr7:85555300-85555319 None:intergenic 35.0%
!! AGTAAGAACTTGTTAGAGTC+CGG + Chr7:85554204-85554223 None:intergenic 35.0%
!! ATGTTGTTTCTATGATCCGT+AGG - Chr7:85553914-85553933 MsG0780041016.01.T01:intron 35.0%
!! ATTGGATTGGTTGGAAATTG+TGG - Chr7:85554784-85554803 MsG0780041016.01.T01:CDS 35.0%
!!! TGTTATTTTGTTAGTAGGGG+TGG - Chr7:85555231-85555250 MsG0780041016.01.T01:intron 35.0%
AAAATGCAATGCCACCCAAT+GGG + Chr7:85553173-85553192 None:intergenic 40.0%
AAGATCTTCAACAGAGGAGT+TGG + Chr7:85553452-85553471 None:intergenic 40.0%
AATAGTAATGTGAGGGATCC+GGG + Chr7:85555533-85555552 None:intergenic 40.0%
ACATTGTGAGATCCATTCCT+AGG + Chr7:85555884-85555903 None:intergenic 40.0%
AGGTGAAAGATCTTCAACAG+AGG + Chr7:85553458-85553477 None:intergenic 40.0%
ATCTCCACAAGGTTCTTCAA+TGG + Chr7:85555723-85555742 None:intergenic 40.0%
ATGCTGCTAAGATTGAACAC+AGG + Chr7:85554061-85554080 None:intergenic 40.0%
CACGCTCAAAACTAGACATT+TGG + Chr7:85555366-85555385 None:intergenic 40.0%
CTATCCGTTATTGAGCTACT+CGG - Chr7:85555332-85555351 MsG0780041016.01.T01:CDS 40.0%
CTTGTTAGCTGTTATCTCAG+TGG - Chr7:85553725-85553744 MsG0780041016.01.T01:intron 40.0%
GAAACCATTGAAGAACCTTG+TGG - Chr7:85555716-85555735 MsG0780041016.01.T01:intron 40.0%
GAAGATCTTTCACCTACCAT+TGG - Chr7:85553463-85553482 MsG0780041016.01.T01:intron 40.0%
GAATAGTAATGTGAGGGATC+CGG + Chr7:85555534-85555553 None:intergenic 40.0%
GATCAAAGCCACAATTTCTC+AGG + Chr7:85554299-85554318 None:intergenic 40.0%
GTATATACCTGTGTCCCAAA+TGG + Chr7:85553993-85554012 None:intergenic 40.0%
GTCTAATGTGAGACTCTGAA+CGG + Chr7:85555040-85555059 None:intergenic 40.0%
TAGGAGTTGGAATGATAAGG+AGG + Chr7:85555269-85555288 None:intergenic 40.0%
TATCCGTTATTGAGCTACTC+GGG - Chr7:85555333-85555352 MsG0780041016.01.T01:CDS 40.0%
TCATCAGAATATCACGGTGA+TGG + Chr7:85555497-85555516 None:intergenic 40.0%
TCCAACTTACAGAAACAGTG+TGG - Chr7:85553192-85553211 MsG0780041016.01.T01:CDS 40.0%
TGTCTGTGTGTTATGTGTTG+TGG + Chr7:85553289-85553308 None:intergenic 40.0%
TTAGCCCTTGCTAAAGAACT+GGG - Chr7:85556000-85556019 MsG0780041016.01.T01:five_prime_UTR 40.0%
! AAACTTACCATTTGGGACAC+AGG - Chr7:85553983-85554002 MsG0780041016.01.T01:intron 40.0%
! AGAAGTGTGGTCTAAGGAAT+TGG - Chr7:85554471-85554490 MsG0780041016.01.T01:intron 40.0%
! AGCATTGGATATATTGCAGC+TGG - Chr7:85554166-85554185 MsG0780041016.01.T01:intron 40.0%
! CGATTTTGTAGAGTGGTGTT+AGG - Chr7:85555113-85555132 MsG0780041016.01.T01:intron 40.0%
! CTTTGAAGAACTCGCTCTAA+AGG - Chr7:85556074-85556093 MsG0780041016.01.T01:five_prime_UTR 40.0%
! TCTTACTATAGAGGAGCACA+AGG - Chr7:85554217-85554236 MsG0780041016.01.T01:intron 40.0%
! TTGATTGGTGATTCTGGTGT+TGG - Chr7:85553397-85553416 MsG0780041016.01.T01:intron 40.0%
!! AAAGGTGGCTTGTAGTTTTG+GGG + Chr7:85555299-85555318 None:intergenic 40.0%
!! CTCAATAACGGATAGTCCAA+GGG + Chr7:85555327-85555346 None:intergenic 40.0%
!! GAAAAGGTGGCTTGTAGTTT+TGG + Chr7:85555301-85555320 None:intergenic 40.0%
!! TACAAGCCGATTTTGTAGAG+TGG - Chr7:85555106-85555125 MsG0780041016.01.T01:intron 40.0%
!! TAGGAGTTCTGGAAAGCTAA+GGG + Chr7:85555865-85555884 None:intergenic 40.0%
AAATGCAATGCCACCCAATG+GGG + Chr7:85553172-85553191 None:intergenic 45.0%
AACACCCCAGTTCTTTAGCA+AGG + Chr7:85556008-85556027 None:intergenic 45.0%
AAGATCAAAACGCTCACGGT+AGG - Chr7:85553947-85553966 MsG0780041016.01.T01:intron 45.0%
ACACCCCAGTTCTTTAGCAA+GGG + Chr7:85556007-85556026 None:intergenic 45.0%
AGATCCATTCCTAGGAGTTC+TGG + Chr7:85555876-85555895 None:intergenic 45.0%
ATAGTAATGTGAGGGATCCG+GGG + Chr7:85555532-85555551 None:intergenic 45.0%
ATATTGCAGCTGGACAGGAA+AGG - Chr7:85554176-85554195 MsG0780041016.01.T01:intron 45.0%
ATGAGTTCATCATCAGGCTC+TGG - Chr7:85553337-85553356 MsG0780041016.01.T01:intron 45.0%
CTTAGCCCTTGCTAAAGAAC+TGG - Chr7:85555999-85556018 MsG0780041016.01.T01:five_prime_UTR 45.0%
CTTTCCAGAACTCCTAGGAA+TGG - Chr7:85555869-85555888 MsG0780041016.01.T01:CDS 45.0%
GAAAATGCAATGCCACCCAA+TGG + Chr7:85553174-85553193 None:intergenic 45.0%
GATAGTCCAAGGGAGTGAAA+AGG + Chr7:85555317-85555336 None:intergenic 45.0%
GATGACATACATCAGAACCC+CGG - Chr7:85555512-85555531 MsG0780041016.01.T01:intron 45.0%
GGAGCACAAGGAATCATTCT+CGG - Chr7:85554229-85554248 MsG0780041016.01.T01:intron 45.0%
TAGCCCTTGCTAAAGAACTG+GGG - Chr7:85556001-85556020 MsG0780041016.01.T01:five_prime_UTR 45.0%
TGACCCGAGTAGCTCAATAA+CGG + Chr7:85555339-85555358 None:intergenic 45.0%
TGGATATATTGCAGCTGGAC+AGG - Chr7:85554171-85554190 MsG0780041016.01.T01:intron 45.0%
! AGTCTTCTGGTAATGCAACC+TGG + Chr7:85554644-85554663 None:intergenic 45.0%
! CTTAGCTTTCCAGAACTCCT+AGG - Chr7:85555864-85555883 MsG0780041016.01.T01:CDS 45.0%
! CTTGTCAGAAGTGTGGTCTA+AGG - Chr7:85554465-85554484 MsG0780041016.01.T01:intron 45.0%
! TCAGAATATCACGGTGATGG+TGG + Chr7:85555494-85555513 None:intergenic 45.0%
!! CTAGGAGTTCTGGAAAGCTA+AGG + Chr7:85555866-85555885 None:intergenic 45.0%
!! GCCACACTGTTTCTGTAAGT+TGG + Chr7:85553196-85553215 None:intergenic 45.0%
!! GCTCAATAACGGATAGTCCA+AGG + Chr7:85555328-85555347 None:intergenic 45.0%
!!! GTAGTTTTGGGGAGGAACAT+AGG + Chr7:85555288-85555307 None:intergenic 45.0%
!!! GTCTAGTTTTGAGCGTGAGA+GGG - Chr7:85555369-85555388 MsG0780041016.01.T01:intron 45.0%
!!! TGTCTAGTTTTGAGCGTGAG+AGG - Chr7:85555368-85555387 MsG0780041016.01.T01:intron 45.0%
!! AAAAAAGAAAAAAAATAAAA+CGG + Chr7:85555193-85555212 None:intergenic 5.0%
AGGGCTGTAAGCAGAGAAGA+GGG - Chr7:85555976-85555995 MsG0780041016.01.T01:five_prime_UTR 50.0%
AGTCCAAGGGAGTGAAAAGG+TGG + Chr7:85555314-85555333 None:intergenic 50.0%
ATCAAAACGCTCACGGTAGG+TGG - Chr7:85553950-85553969 MsG0780041016.01.T01:intron 50.0%
CTACTCTCTCTCTCTCTCTC+TGG - Chr7:85553235-85553254 MsG0780041016.01.T01:CDS 50.0%
GAGTGCGTGAAGATGCTAGT+TGG - Chr7:85554514-85554533 MsG0780041016.01.T01:intron 50.0%
TCAAAACGCTCACGGTAGGT+GGG - Chr7:85553951-85553970 MsG0780041016.01.T01:intron 50.0%
TGAAGTGATACCCCATTGGG+TGG - Chr7:85553159-85553178 MsG0780041016.01.T01:CDS 50.0%
TTGGGGAGGAACATAGGAGT+TGG + Chr7:85555282-85555301 None:intergenic 50.0%
! AAGCCACCTTTTCACTCCCT+TGG - Chr7:85555308-85555327 MsG0780041016.01.T01:CDS 50.0%
CAGCTGGACAGGAAAGGTTC+CGG - Chr7:85554182-85554201 MsG0780041016.01.T01:intron 55.0%
GAGGGCTGTAAGCAGAGAAG+AGG - Chr7:85555975-85555994 MsG0780041016.01.T01:five_prime_UTR 55.0%
! TCAGGCTCTGGTCATAGCAG+TGG - Chr7:85553349-85553368 MsG0780041016.01.T01:intron 55.0%
!!! GGTGGCTTGTAGTTTTGGGG+AGG + Chr7:85555296-85555315 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr7 gene 85553144 85556155 85553144 ID=MsG0780041016.01;Name=MsG0780041016.01
Chr7 mRNA 85553144 85556155 85553144 ID=MsG0780041016.01.T01;Parent=MsG0780041016.01;Name=MsG0780041016.01.T01;_AED=0.50;_eAED=0.53;_QI=193|1|0.8|1|1|1|5|0|197
Chr7 exon 85553144 85553332 85553144 ID=MsG0780041016.01.T01:exon:19313;Parent=MsG0780041016.01.T01
Chr7 exon 85554747 85554868 85554747 ID=MsG0780041016.01.T01:exon:19312;Parent=MsG0780041016.01.T01
Chr7 exon 85555049 85555114 85555049 ID=MsG0780041016.01.T01:exon:19311;Parent=MsG0780041016.01.T01
Chr7 exon 85555295 85555363 85555295 ID=MsG0780041016.01.T01:exon:19310;Parent=MsG0780041016.01.T01
Chr7 exon 85555815 85556155 85555815 ID=MsG0780041016.01.T01:exon:19309;Parent=MsG0780041016.01.T01
Chr7 five_prime_UTR 85555963 85556155 85555963 ID=MsG0780041016.01.T01:five_prime_utr;Parent=MsG0780041016.01.T01
Chr7 CDS 85555815 85555962 85555815 ID=MsG0780041016.01.T01:cds;Parent=MsG0780041016.01.T01
Chr7 CDS 85555295 85555363 85555295 ID=MsG0780041016.01.T01:cds;Parent=MsG0780041016.01.T01
Chr7 CDS 85555049 85555114 85555049 ID=MsG0780041016.01.T01:cds;Parent=MsG0780041016.01.T01
Chr7 CDS 85554747 85554868 85554747 ID=MsG0780041016.01.T01:cds;Parent=MsG0780041016.01.T01
Chr7 CDS 85553144 85553332 85553144 ID=MsG0780041016.01.T01:cds;Parent=MsG0780041016.01.T01
Gene Sequence

>MsG0780041016.01.T01

ATGAGTTCATCATCAGGCTCTGGTCATAGCAGTGGCCATGATCTCTCTTTCAAGATCTTGTTGATTGGTGATTCTGGTGTTGGAAAAAGTTGTTTACTTGTCACTTTCATTTCCAACTCCTCTGTTGAAGATCTTTCACCTACCATTGGTGTTGATTTTAAGATCAAAACGCTCACGGTAGGTGGGAAAAGATTAAAACTTACCATTTGGGACACAGCTGGACAGGAAAGGTTCCGGACTCTAACAAGTTCTTACTATAGAGGAGCACAAGGAATCATTCTCGTTTATGATGTCACAAGGAGAGAAACCTTTACAAACTTGTCAGAAGTGTGGTCTAAGGAATTGGAACTCTATTCAACTAATCAGGAGTGCGTGAAGATGCTAGTTGGAAATAAAGTTGACAAAGATTCTGAGAGGGCTGTAAGCAGAGAAGAGGGCTTAGCCCTTGCTAAAGAACTGGGGTGTTTGCTTCTTGAATGTAGTGCTAAAACTCGAGAAAATGTGGAGAAGTGCTTTGAAGAACTCGCTCTAAAGGTACGATTTTATAGGTTTCCTTTAATGATGTTTCTGTCTTATGCATATTGTTCCAATTAA

Protein sequence

>MsG0780041016.01.T01

MSSSSGSGHSSGHDLSFKILLIGDSGVGKSCLLVTFISNSSVEDLSPTIGVDFKIKTLTVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSEVWSKELELYSTNQECVKMLVGNKVDKDSERAVSREEGLALAKELGCLLLECSAKTRENVEKCFEELALKVRFYRFPLMMFLSYAYCSN*