Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005248.01.T01 | ACJ84495.1 | 97.727 | 176 | 4 | 0 | 1 | 176 | 180 | 355 | 1.75E-118 | 349 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005248.01.T01 | B7FIB6 | 97.727 | 176 | 4 | 0 | 1 | 176 | 180 | 355 | 8.37e-119 | 349 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048660.01 | MsG0180005248.01 | -0.831819 | 1.345009e-55 | 1.476330e-52 |
| MsG0080048727.01 | MsG0180005248.01 | -0.812940 | 3.291778e-51 | 2.120746e-48 |
| MsG0080048748.01 | MsG0180005248.01 | -0.802673 | 5.017048e-49 | 2.472314e-46 |
| MsG0080048773.01 | MsG0180005248.01 | -0.813691 | 2.251488e-51 | 1.480456e-48 |
| MsG0080048849.01 | MsG0180005248.01 | -0.805871 | 1.082723e-49 | 5.792493e-47 |
| MsG0080048878.01 | MsG0180005248.01 | -0.805320 | 1.412787e-49 | 7.451820e-47 |
| MsG0080049068.01 | MsG0180005248.01 | -0.804399 | 2.201183e-49 | 1.133763e-46 |
| MsG0180000129.01 | MsG0180005248.01 | -0.817388 | 3.383846e-52 | 2.461023e-49 |
| MsG0180000599.01 | MsG0180005248.01 | -0.808049 | 3.747723e-50 | 2.120997e-47 |
| MsG0180000670.01 | MsG0180005248.01 | -0.802676 | 5.010718e-49 | 2.469402e-46 |
| MsG0180000785.01 | MsG0180005248.01 | -0.803062 | 4.171063e-49 | 2.075811e-46 |
| MsG0180001610.01 | MsG0180005248.01 | -0.832662 | 8.316873e-56 | 9.358544e-53 |
| MsG0180001704.01 | MsG0180005248.01 | -0.844031 | 9.721102e-59 | 1.549655e-55 |
| MsG0180002024.01 | MsG0180005248.01 | -0.830752 | 2.460837e-55 | 2.616703e-52 |
| MsG0180002399.01 | MsG0180005248.01 | -0.804206 | 2.413847e-49 | 1.237168e-46 |
| MsG0180002700.01 | MsG0180005248.01 | -0.811567 | 6.564355e-51 | 4.077203e-48 |
| MsG0180004466.01 | MsG0180005248.01 | -0.805908 | 1.063784e-49 | 5.696318e-47 |
| MsG0180004541.01 | MsG0180005248.01 | -0.817364 | 3.427218e-52 | 2.490801e-49 |
| MsG0180005248.01 | MsG0180005964.01 | -0.802336 | 5.889426e-49 | 2.877488e-46 |
| MsG0180005248.01 | MsG0180006031.01 | -0.827721 | 1.337617e-54 | 1.302014e-51 |
| MsG0180005248.01 | MsG0180006136.01 | -0.808721 | 2.694443e-50 | 1.551945e-47 |
| MsG0180005248.01 | MsG0280006996.01 | -0.835637 | 1.494283e-56 | 1.838102e-53 |
| MsG0180005248.01 | MsG0280007647.01 | -0.845870 | 3.100424e-59 | 5.239936e-56 |
| MsG0180005248.01 | MsG0280007771.01 | -0.807743 | 4.354091e-50 | 2.444567e-47 |
| MsG0180005248.01 | MsG0280009256.01 | -0.802406 | 5.694975e-49 | 2.787556e-46 |
| MsG0180005248.01 | MsG0280009756.01 | -0.811439 | 6.997984e-51 | 4.332073e-48 |
| MsG0180005248.01 | MsG0280009953.01 | -0.807720 | 4.404334e-50 | 2.471186e-47 |
| MsG0180005248.01 | MsG0280010484.01 | 0.836928 | 7.018687e-57 | 8.976486e-54 |
| MsG0180005248.01 | MsG0280010503.01 | -0.807666 | 4.521437e-50 | 2.533306e-47 |
| MsG0180005248.01 | MsG0280010604.01 | 0.804340 | 2.264614e-49 | 1.164679e-46 |
| MsG0180005248.01 | MsG0280011255.01 | -0.833841 | 4.229898e-56 | 4.931025e-53 |
| MsG0180005248.01 | MsG0380013295.01 | 0.819758 | 9.816979e-53 | 7.622417e-50 |
| MsG0180005248.01 | MsG0380014240.01 | -0.808555 | 2.923953e-50 | 1.676962e-47 |
| MsG0180005248.01 | MsG0380015056.01 | 0.828179 | 1.038308e-54 | 1.024306e-51 |
| MsG0180005248.01 | MsG0380015784.01 | -0.852620 | 4.097494e-61 | 8.612037e-58 |
| MsG0180005248.01 | MsG0380015885.01 | -0.810331 | 1.215587e-50 | 7.306614e-48 |
| MsG0180005248.01 | MsG0380015891.01 | -0.808904 | 2.463134e-50 | 1.425589e-47 |
| MsG0180005248.01 | MsG0380015896.01 | -0.801806 | 7.567284e-49 | 3.647662e-46 |
| MsG0180005248.01 | MsG0380016057.01 | -0.804900 | 1.729946e-49 | 9.027662e-47 |
| MsG0180005248.01 | MsG0380016425.01 | 0.828886 | 7.004420e-55 | 7.052749e-52 |
| MsG0180005248.01 | MsG0380016479.01 | -0.821035 | 5.000403e-53 | 4.023182e-50 |
| MsG0180005248.01 | MsG0380016540.01 | -0.812342 | 4.448842e-51 | 2.821463e-48 |
| MsG0180005248.01 | MsG0380016864.01 | -0.825488 | 4.560452e-54 | 4.162667e-51 |
| MsG0180005248.01 | MsG0380017262.01 | 0.817129 | 3.869357e-52 | 2.794098e-49 |
| MsG0180005248.01 | MsG0380018037.01 | -0.814798 | 1.282251e-51 | 8.687696e-49 |
| MsG0180005248.01 | MsG0480018525.01 | 0.824978 | 6.020347e-54 | 5.416369e-51 |
| MsG0180005248.01 | MsG0480018584.01 | -0.806593 | 7.630120e-50 | 4.157682e-47 |
| MsG0180005248.01 | MsG0480020502.01 | -0.804922 | 1.711443e-49 | 8.936001e-47 |
| MsG0180005248.01 | MsG0480020690.01 | -0.800560 | 1.361030e-48 | 6.356953e-46 |
| MsG0180005248.01 | MsG0480021060.01 | -0.830051 | 3.651092e-55 | 3.803777e-52 |
| MsG0180005248.01 | MsG0480021248.01 | -0.860212 | 2.418258e-63 | 6.559422e-60 |
| MsG0180005248.01 | MsG0480022491.01 | 0.827797 | 1.282837e-54 | 1.251345e-51 |
| MsG0180005248.01 | MsG0480022994.01 | -0.822075 | 2.875434e-53 | 2.381790e-50 |
| MsG0180005248.01 | MsG0480023121.01 | -0.809162 | 2.168293e-50 | 1.263770e-47 |
| MsG0180005248.01 | MsG0480023190.01 | -0.807083 | 6.011403e-50 | 3.317335e-47 |
| MsG0180005248.01 | MsG0480023348.01 | 0.844159 | 8.986488e-59 | 1.438160e-55 |
| MsG0180005248.01 | MsG0480023723.01 | -0.806115 | 9.622982e-50 | 5.180276e-47 |
| MsG0180005248.01 | MsG0480023877.01 | -0.815547 | 8.740120e-52 | 6.043965e-49 |
| MsG0180005248.01 | MsG0580024285.01 | -0.802598 | 5.200400e-49 | 2.557794e-46 |
| MsG0180005248.01 | MsG0580024628.01 | -0.827683 | 1.366622e-54 | 1.328712e-51 |
| MsG0180005248.01 | MsG0580024788.01 | -0.812521 | 4.066253e-51 | 2.591121e-48 |
| MsG0180005248.01 | MsG0580024790.01 | 0.813934 | 1.990450e-51 | 1.317390e-48 |
| MsG0180005248.01 | MsG0580024843.01 | -0.808371 | 3.200522e-50 | 1.826840e-47 |
| MsG0180005248.01 | MsG0580025055.01 | -0.801115 | 1.048387e-48 | 4.966246e-46 |
| MsG0180005248.01 | MsG0580025366.01 | -0.803029 | 4.236142e-49 | 2.106481e-46 |
| MsG0180005248.01 | MsG0580025407.01 | 0.831260 | 1.845838e-55 | 1.992352e-52 |
| MsG0180005248.01 | MsG0580025561.01 | 0.809869 | 1.529058e-50 | 9.080508e-48 |
| MsG0180005248.01 | MsG0580025612.01 | -0.803781 | 2.959249e-49 | 1.500255e-46 |
| MsG0180005248.01 | MsG0580025626.01 | -0.805164 | 1.523758e-49 | 8.004841e-47 |
| MsG0180005248.01 | MsG0580025627.01 | -0.839354 | 1.666402e-57 | 2.295458e-54 |
| MsG0180005248.01 | MsG0580025668.01 | -0.806400 | 8.378752e-50 | 4.543221e-47 |
| MsG0180005248.01 | MsG0580026159.01 | 0.864487 | 1.173415e-64 | 3.690500e-61 |
| MsG0180005248.01 | MsG0580027394.01 | -0.807805 | 4.223846e-50 | 2.375200e-47 |
| MsG0180005248.01 | MsG0580027928.01 | 0.820128 | 8.077663e-53 | 6.337462e-50 |
| MsG0180005248.01 | MsG0580028428.01 | -0.809953 | 1.466634e-50 | 8.729174e-48 |
| MsG0180005248.01 | MsG0580029529.01 | -0.806172 | 9.358786e-50 | 5.045516e-47 |
| MsG0180005248.01 | MsG0680030516.01 | -0.824413 | 8.182430e-54 | 7.241844e-51 |
| MsG0180005248.01 | MsG0680030858.01 | -0.807934 | 3.965693e-50 | 2.237497e-47 |
| MsG0180005248.01 | MsG0680031146.01 | -0.812944 | 3.285490e-51 | 2.116912e-48 |
| MsG0180005248.01 | MsG0680031702.01 | -0.828201 | 1.025452e-54 | 1.012267e-51 |
| MsG0180005248.01 | MsG0680032473.01 | 0.858674 | 7.005973e-63 | 1.802322e-59 |
| MsG0180005248.01 | MsG0680033377.01 | -0.817538 | 3.130895e-52 | 2.286343e-49 |
| MsG0180005248.01 | MsG0680035859.01 | -0.821063 | 4.927816e-53 | 3.967814e-50 |
| MsG0180005248.01 | MsG0780035960.01 | -0.809457 | 1.874300e-50 | 1.101006e-47 |
| MsG0180005248.01 | MsG0780035965.01 | -0.800266 | 1.562493e-48 | 7.243793e-46 |
| MsG0180005248.01 | MsG0780036593.01 | -0.812981 | 3.223840e-51 | 2.079306e-48 |
| MsG0180005248.01 | MsG0780036596.01 | -0.822218 | 2.663908e-53 | 2.215689e-50 |
| MsG0180005248.01 | MsG0780036792.01 | -0.816127 | 6.491191e-52 | 4.560528e-49 |
| MsG0180005248.01 | MsG0780037341.01 | -0.809782 | 1.596063e-50 | 9.457448e-48 |
| MsG0180005248.01 | MsG0780037372.01 | -0.813341 | 2.688433e-51 | 1.751035e-48 |
| MsG0180005248.01 | MsG0780037395.01 | -0.851482 | 8.622984e-61 | 1.747686e-57 |
| MsG0180005248.01 | MsG0780038056.01 | -0.804949 | 1.690048e-49 | 8.830028e-47 |
| MsG0180005248.01 | MsG0780038744.01 | -0.843934 | 1.032602e-58 | 1.641105e-55 |
| MsG0180005248.01 | MsG0780040278.01 | -0.819384 | 1.194560e-52 | 9.178235e-50 |
| MsG0180005248.01 | MsG0780040388.01 | -0.809613 | 1.735730e-50 | 1.023915e-47 |
| MsG0180005248.01 | MsG0780041262.01 | -0.826351 | 2.846044e-54 | 2.662473e-51 |
| MsG0180005248.01 | MsG0880041861.01 | -0.848808 | 4.840275e-60 | 8.990358e-57 |
| MsG0180005248.01 | MsG0880041864.01 | -0.856091 | 4.066559e-62 | 9.594765e-59 |
| MsG0180005248.01 | MsG0880042044.01 | -0.814069 | 1.858783e-51 | 1.234825e-48 |
| MsG0180005248.01 | MsG0880043174.01 | -0.801209 | 1.003243e-48 | 4.763462e-46 |
| MsG0180005248.01 | MsG0880043277.01 | -0.817406 | 3.351975e-52 | 2.439029e-49 |
| MsG0180005248.01 | MsG0880044036.01 | -0.803078 | 4.139226e-49 | 2.060809e-46 |
| MsG0180005248.01 | MsG0880044487.01 | -0.829247 | 5.727240e-55 | 5.829554e-52 |
| MsG0180005248.01 | MsG0880044696.01 | 0.811600 | 6.454704e-51 | 4.012459e-48 |
| MsG0180005248.01 | MsG0880044985.01 | -0.806242 | 9.045559e-50 | 4.885443e-47 |
| MsG0180005248.01 | MsG0880045668.01 | -0.825471 | 4.603218e-54 | 4.199514e-51 |
| MsG0180005248.01 | MsG0880045669.01 | 0.806550 | 7.790555e-50 | 4.240691e-47 |
| MsG0180005248.01 | MsG0880045992.01 | -0.803470 | 3.433783e-49 | 1.726959e-46 |
| MsG0180005248.01 | MsG0880046334.01 | 0.812768 | 3.590629e-51 | 2.302808e-48 |
| MsG0180005248.01 | MsG0880046382.01 | -0.817210 | 3.711206e-52 | 2.685835e-49 |
| MsG0180005248.01 | MsG0880046699.01 | -0.800790 | 1.221403e-48 | 5.737993e-46 |
| MsG0180005248.01 | MsG0880046765.01 | -0.821548 | 3.809067e-53 | 3.108426e-50 |
| MsG0180005248.01 | MsG0880047394.01 | -0.836337 | 9.927133e-57 | 1.247371e-53 |
| MsG0180005248.01 | MsG0880047422.01 | 0.811594 | 6.475083e-51 | 4.024472e-48 |
| MsG0180005248.01 | MsG0880047481.01 | 0.821914 | 3.133655e-53 | 2.583937e-50 |
| MsG0180005248.01 | MsG0880047538.01 | -0.810877 | 9.261995e-51 | 5.649149e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005248.01.T01 | MTR_1g095600 | 97.727 | 176 | 4 | 0 | 1 | 176 | 180 | 355 | 2.17e-122 | 349 |
| MsG0180005248.01.T01 | MTR_5g026910 | 58.523 | 176 | 65 | 2 | 1 | 176 | 190 | 357 | 1.13e-51 | 169 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180005248.01.T01 | AT4G25030 | 64.740 | 173 | 51 | 4 | 1 | 172 | 174 | 337 | 4.14e-69 | 213 |
| MsG0180005248.01.T01 | AT4G25030 | 64.740 | 173 | 51 | 4 | 1 | 172 | 174 | 337 | 4.14e-69 | 213 |
| MsG0180005248.01.T01 | AT5G45410 | 79.130 | 115 | 24 | 0 | 1 | 115 | 177 | 291 | 6.05e-60 | 190 |
| MsG0180005248.01.T01 | AT5G45410 | 79.130 | 115 | 24 | 0 | 1 | 115 | 177 | 291 | 6.05e-60 | 190 |
| MsG0180005248.01.T01 | AT5G45410 | 79.130 | 115 | 24 | 0 | 1 | 115 | 177 | 291 | 6.05e-60 | 190 |
| MsG0180005248.01.T01 | AT5G45410 | 79.130 | 115 | 24 | 0 | 1 | 115 | 177 | 291 | 6.05e-60 | 190 |
| MsG0180005248.01.T01 | AT5G45410 | 79.130 | 115 | 24 | 0 | 1 | 115 | 177 | 291 | 6.05e-60 | 190 |
Find 52 sgRNAs with CRISPR-Local
Find 60 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTATTGCAGCATCAATTT+TGG | 0.095240 | 1:-89158178 | MsG0180005248.01.T01:CDS |
| CCGACAAAAGTTCTTGTGAT+TGG | 0.288665 | 1:-89158354 | MsG0180005248.01.T01:CDS |
| TGTTGGTTCGGTTCAGTTAC+CGG | 0.302078 | 1:-89158037 | MsG0180005248.01.T01:CDS |
| TGTTGGTTCGGTTCAGTTAC+CGG | 0.302078 | 1:-89158073 | MsG0180005248.01.T01:CDS |
| AGAAGCTGGATTCCACTTAA+TGG | 0.381452 | 1:+89157978 | None:intergenic |
| GTAAATGCCATCGCTGATTT+AGG | 0.392350 | 1:+89158198 | None:intergenic |
| GATGGCAGTTAATGTTCCCC+TGG | 0.396744 | 1:-89158322 | MsG0180005248.01.T01:CDS |
| CAGCTCTGGAGCCGATTACT+TGG | 0.406356 | 1:+89158154 | None:intergenic |
| TGAAACTTCTGATGTTGGTT+CGG | 0.422639 | 1:-89158085 | MsG0180005248.01.T01:CDS |
| TTAATGTTCCCCTGGGTGTA+TGG | 0.431929 | 1:-89158314 | MsG0180005248.01.T01:CDS |
| CGGTGCGTGCTATAGCCGCC+CGG | 0.447654 | 1:+89158409 | None:intergenic |
| AGTTCTTGTGATTGGAATGA+TGG | 0.455110 | 1:-89158346 | MsG0180005248.01.T01:CDS |
| GGTTAAACCTGATGTTGGTT+CGG | 0.456336 | 1:-89158049 | MsG0180005248.01.T01:CDS |
| GCAATTGAAACTTCTGATGT+TGG | 0.457076 | 1:-89158090 | MsG0180005248.01.T01:CDS |
| TTCCTAAGCATTGCTATGAA+TGG | 0.459333 | 1:+89158234 | None:intergenic |
| CACAGGTAATAGTTGAGGCC+CGG | 0.459547 | 1:-89158428 | MsG0180005248.01.T01:CDS |
| TTGCAGCAACCGCCTTCAAA+CGG | 0.498713 | 1:+89158124 | None:intergenic |
| AGCTGAGAGGTACCGTTTGA+AGG | 0.501698 | 1:-89158136 | MsG0180005248.01.T01:CDS |
| GCTGTCAGCTGAAGAGAAGC+TGG | 0.505469 | 1:+89157964 | None:intergenic |
| TTCCATTCATAGCAATGCTT+AGG | 0.510376 | 1:-89158236 | MsG0180005248.01.T01:CDS |
| ACAGGTAATAGTTGAGGCCC+GGG | 0.513811 | 1:-89158427 | MsG0180005248.01.T01:CDS |
| GTTCTTGTGATTGGAATGAT+GGG | 0.518850 | 1:-89158345 | MsG0180005248.01.T01:CDS |
| AACTGAACCGAACCAACATC+AGG | 0.528631 | 1:+89158042 | None:intergenic |
| CTGTCTTTAGATTTAACCAC+CGG | 0.531229 | 1:+89158018 | None:intergenic |
| CAAACGGTACCTCTCAGCTC+TGG | 0.535101 | 1:+89158140 | None:intergenic |
| CCGGTGGTTAAACCTGATGT+TGG | 0.535233 | 1:-89158054 | MsG0180005248.01.T01:CDS |
| ATGGCAGTTAATGTTCCCCT+GGG | 0.538720 | 1:-89158321 | MsG0180005248.01.T01:CDS |
| CGGGCCTCAACTATTACCTG+TGG | 0.551578 | 1:+89158429 | None:intergenic |
| GGGTGTATGGAGAGAACATA+CGG | 0.582703 | 1:-89158301 | MsG0180005248.01.T01:CDS |
| CGGTGGTTAAATCTAAAGAC+AGG | 0.591640 | 1:-89158017 | MsG0180005248.01.T01:CDS |
| AGACAGGCACTGTGGTGATG+AGG | 0.596413 | 1:-89158001 | MsG0180005248.01.T01:CDS |
| GGTGCGTGCTATAGCCGCCC+GGG | 0.604464 | 1:+89158410 | None:intergenic |
| ATGTTCTCTCCATACACCCA+GGG | 0.609222 | 1:+89158305 | None:intergenic |
| GGGCCTCAACTATTACCTGT+GGG | 0.612298 | 1:+89158430 | None:intergenic |
| GCGGAGATTCTTTGCAAATG+CGG | 0.615724 | 1:+89158389 | None:intergenic |
| TATGTTCTCTCCATACACCC+AGG | 0.620444 | 1:+89158304 | None:intergenic |
| CTTGATGCCTAAATCAGCGA+TGG | 0.629945 | 1:-89158205 | MsG0180005248.01.T01:CDS |
| TGTGATTGGAATGATGGGGA+TGG | 0.631056 | 1:-89158340 | MsG0180005248.01.T01:CDS |
| CTATGAATGGAACAGCTGCA+TGG | 0.632725 | 1:+89158247 | None:intergenic |
| GTGGTGATGAGGCCATTAAG+TGG | 0.636840 | 1:-89157990 | MsG0180005248.01.T01:CDS |
| TATGAAATACAAGTGCCCAC+AGG | 0.637852 | 1:-89158445 | MsG0180005248.01.T01:CDS |
| CCAACATCAGGTTTAACCAC+CGG | 0.638938 | 1:+89158054 | None:intergenic |
| GTGCCCACAGGTAATAGTTG+AGG | 0.641293 | 1:-89158433 | MsG0180005248.01.T01:CDS |
| TGAGAGGTACCGTTTGAAGG+CGG | 0.674519 | 1:-89158133 | MsG0180005248.01.T01:CDS |
| TGGACAGCGACAAACCATGA+CGG | 0.683212 | 1:+89158267 | None:intergenic |
| TGGTTCGGTTCAGTTACCGG+TGG | 0.691322 | 1:-89158034 | MsG0180005248.01.T01:CDS |
| TGGTTCGGTTCAGTTACCGG+TGG | 0.691322 | 1:-89158070 | MsG0180005248.01.T01:CDS |
| TAATCGGCTCCAGAGCTGAG+AGG | 0.712400 | 1:-89158149 | MsG0180005248.01.T01:CDS |
| TTCTTGTGATTGGAATGATG+GGG | 0.717293 | 1:-89158344 | MsG0180005248.01.T01:CDS |
| AAATCTAAAGACAGGCACTG+TGG | 0.728626 | 1:-89158009 | MsG0180005248.01.T01:CDS |
| GGTAATAGTTGAGGCCCGGG+CGG | 0.745364 | 1:-89158424 | MsG0180005248.01.T01:CDS |
| TGTTCTCTCCATACACCCAG+GGG | 0.753131 | 1:+89158306 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ACTATTGCAGCATCAATTTT+GGG | - | Chr1:89158203-89158222 | MsG0180005248.01.T01:CDS | 30.0% |
| ! | TACTATTGCAGCATCAATTT+TGG | - | Chr1:89158202-89158221 | MsG0180005248.01.T01:CDS | 30.0% |
| AGTTCTTGTGATTGGAATGA+TGG | - | Chr1:89158034-89158053 | MsG0180005248.01.T01:CDS | 35.0% | |
| CTGTCTTTAGATTTAACCAC+CGG | + | Chr1:89158365-89158384 | None:intergenic | 35.0% | |
| GCAATTGAAACTTCTGATGT+TGG | - | Chr1:89158290-89158309 | MsG0180005248.01.T01:CDS | 35.0% | |
| GTTCTTGTGATTGGAATGAT+GGG | - | Chr1:89158035-89158054 | MsG0180005248.01.T01:CDS | 35.0% | |
| TTCCATTCATAGCAATGCTT+AGG | - | Chr1:89158144-89158163 | MsG0180005248.01.T01:CDS | 35.0% | |
| TTCTTGTGATTGGAATGATG+GGG | - | Chr1:89158036-89158055 | MsG0180005248.01.T01:CDS | 35.0% | |
| ! | CCAATCACAAGAACTTTTGT+CGG | + | Chr1:89158029-89158048 | None:intergenic | 35.0% |
| ! | TCAATTTTGGGCCAAGTAAT+CGG | - | Chr1:89158215-89158234 | MsG0180005248.01.T01:CDS | 35.0% |
| ! | TGAAACTTCTGATGTTGGTT+CGG | - | Chr1:89158295-89158314 | MsG0180005248.01.T01:CDS | 35.0% |
| ! | TTCCTAAGCATTGCTATGAA+TGG | + | Chr1:89158149-89158168 | None:intergenic | 35.0% |
| AGAAGCTGGATTCCACTTAA+TGG | + | Chr1:89158405-89158424 | None:intergenic | 40.0% | |
| CCGACAAAAGTTCTTGTGAT+TGG | - | Chr1:89158026-89158045 | MsG0180005248.01.T01:CDS | 40.0% | |
| CGGTGGTTAAATCTAAAGAC+AGG | - | Chr1:89158363-89158382 | MsG0180005248.01.T01:CDS | 40.0% | |
| ! | AAATCTAAAGACAGGCACTG+TGG | - | Chr1:89158371-89158390 | MsG0180005248.01.T01:CDS | 40.0% |
| ! | GGTTAAACCTGATGTTGGTT+CGG | - | Chr1:89158331-89158350 | MsG0180005248.01.T01:CDS | 40.0% |
| !! | GTAAATGCCATCGCTGATTT+AGG | + | Chr1:89158185-89158204 | None:intergenic | 40.0% |
| AACTGAACCGAACCAACATC+AGG | + | Chr1:89158305-89158324 | None:intergenic | 45.0% | |
| ATGGCAGTTAATGTTCCCCT+GGG | - | Chr1:89158059-89158078 | MsG0180005248.01.T01:CDS | 45.0% | |
| ATGTTCTCTCCATACACCCA+GGG | + | Chr1:89158078-89158097 | None:intergenic | 45.0% | |
| CCAACATCAGGTTTAACCAC+CGG | + | Chr1:89158329-89158348 | None:intergenic | 45.0% | |
| CTATGAATGGAACAGCTGCA+TGG | + | Chr1:89158136-89158155 | None:intergenic | 45.0% | |
| CTTGATGCCTAAATCAGCGA+TGG | - | Chr1:89158175-89158194 | MsG0180005248.01.T01:CDS | 45.0% | |
| GCGGAGATTCTTTGCAAATG+CGG | + | Chr1:89157994-89158013 | None:intergenic | 45.0% | |
| GGGTGTATGGAGAGAACATA+CGG | - | Chr1:89158079-89158098 | MsG0180005248.01.T01:CDS | 45.0% | |
| TATGTTCTCTCCATACACCC+AGG | + | Chr1:89158079-89158098 | None:intergenic | 45.0% | |
| TTAATGTTCCCCTGGGTGTA+TGG | - | Chr1:89158066-89158085 | MsG0180005248.01.T01:CDS | 45.0% | |
| ! | CGGAGAAATTTTCACCGTCA+TGG | - | Chr1:89158099-89158118 | MsG0180005248.01.T01:CDS | 45.0% |
| ! | TGTGATTGGAATGATGGGGA+TGG | - | Chr1:89158040-89158059 | MsG0180005248.01.T01:CDS | 45.0% |
| !! | TGTTGGTTCGGTTCAGTTAC+CGG | - | Chr1:89158307-89158326 | MsG0180005248.01.T01:CDS | 45.0% |
| ACAGGTAATAGTTGAGGCCC+GGG | - | Chr1:89157953-89157972 | MsG0180005248.01.T01:CDS | 50.0% | |
| CACAGGTAATAGTTGAGGCC+CGG | - | Chr1:89157952-89157971 | MsG0180005248.01.T01:CDS | 50.0% | |
| CCGGTGGTTAAACCTGATGT+TGG | - | Chr1:89158326-89158345 | MsG0180005248.01.T01:CDS | 50.0% | |
| GATGGCAGTTAATGTTCCCC+TGG | - | Chr1:89158058-89158077 | MsG0180005248.01.T01:CDS | 50.0% | |
| GGGCCTCAACTATTACCTGT+GGG | + | Chr1:89157953-89157972 | None:intergenic | 50.0% | |
| GTGCCCACAGGTAATAGTTG+AGG | - | Chr1:89157947-89157966 | MsG0180005248.01.T01:CDS | 50.0% | |
| TGGACAGCGACAAACCATGA+CGG | + | Chr1:89158116-89158135 | None:intergenic | 50.0% | |
| TGTTCTCTCCATACACCCAG+GGG | + | Chr1:89158077-89158096 | None:intergenic | 50.0% | |
| TTGCAGCAACCGCCTTCAAA+CGG | + | Chr1:89158259-89158278 | None:intergenic | 50.0% | |
| ! | AACTTTTGTCGGCAAGCCCT+GGG | + | Chr1:89158018-89158037 | None:intergenic | 50.0% |
| ! | GTGGTGATGAGGCCATTAAG+TGG | - | Chr1:89158390-89158409 | MsG0180005248.01.T01:CDS | 50.0% |
| !! | AGCTGAGAGGTACCGTTTGA+AGG | - | Chr1:89158244-89158263 | MsG0180005248.01.T01:CDS | 50.0% |
| !! | TGAGAGGTACCGTTTGAAGG+CGG | - | Chr1:89158247-89158266 | MsG0180005248.01.T01:CDS | 50.0% |
| CAAACGGTACCTCTCAGCTC+TGG | + | Chr1:89158243-89158262 | None:intergenic | 55.0% | |
| CGGGCCTCAACTATTACCTG+TGG | + | Chr1:89157954-89157973 | None:intergenic | 55.0% | |
| GCTGTCAGCTGAAGAGAAGC+TGG | + | Chr1:89158419-89158438 | None:intergenic | 55.0% | |
| ! | ACTTTTGTCGGCAAGCCCTG+GGG | + | Chr1:89158017-89158036 | None:intergenic | 55.0% |
| ! | AGACAGGCACTGTGGTGATG+AGG | - | Chr1:89158379-89158398 | MsG0180005248.01.T01:CDS | 55.0% |
| ! | GAACTTTTGTCGGCAAGCCC+TGG | + | Chr1:89158019-89158038 | None:intergenic | 55.0% |
| ! | TAATCGGCTCCAGAGCTGAG+AGG | - | Chr1:89158231-89158250 | MsG0180005248.01.T01:CDS | 55.0% |
| !! | CAGCTCTGGAGCCGATTACT+TGG | + | Chr1:89158229-89158248 | None:intergenic | 55.0% |
| !! | TGGTTCGGTTCAGTTACCGG+TGG | - | Chr1:89158310-89158329 | MsG0180005248.01.T01:CDS | 55.0% |
| GCAAAGAATCTCCGCCCCCA+GGG | - | Chr1:89157999-89158018 | MsG0180005248.01.T01:CDS | 60.0% | |
| GGTAATAGTTGAGGCCCGGG+CGG | - | Chr1:89157956-89157975 | MsG0180005248.01.T01:CDS | 60.0% | |
| TGCAAAGAATCTCCGCCCCC+AGG | - | Chr1:89157998-89158017 | MsG0180005248.01.T01:CDS | 60.0% | |
| ! | CTTTTGTCGGCAAGCCCTGG+GGG | + | Chr1:89158016-89158035 | None:intergenic | 60.0% |
| CGGTGCGTGCTATAGCCGCC+CGG | + | Chr1:89157974-89157993 | None:intergenic | 70.0% | |
| GGTGCGTGCTATAGCCGCCC+GGG | + | Chr1:89157973-89157992 | None:intergenic | 70.0% | |
| TTGTCGGCAAGCCCTGGGGG+CGG | + | Chr1:89158013-89158032 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 89157936 | 89158466 | 89157936 | ID=MsG0180005248.01;Name=MsG0180005248.01 |
| Chr1 | mRNA | 89157936 | 89158466 | 89157936 | ID=MsG0180005248.01.T01;Parent=MsG0180005248.01;Name=MsG0180005248.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|176 |
| Chr1 | exon | 89157936 | 89158466 | 89157936 | ID=MsG0180005248.01.T01:exon:14566;Parent=MsG0180005248.01.T01 |
| Chr1 | CDS | 89157936 | 89158466 | 89157936 | ID=MsG0180005248.01.T01:cds;Parent=MsG0180005248.01.T01 |
| Gene Sequence |
| Protein sequence |
