Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017810.01.T01 | XP_041020649.1 | 74.545 | 110 | 28 | 0 | 2 | 111 | 3 | 112 | 1.28E-56 | 181 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017810.01.T01 | Q43636 | 71.818 | 110 | 31 | 0 | 2 | 111 | 3 | 112 | 2.62E-56 | 173 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017810.01.T01 | A0A2I4DQ33 | 73.636 | 110 | 29 | 0 | 2 | 111 | 3 | 112 | 5.37e-56 | 179 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180002280.01 | MsG0380017810.01 | 0.805700 | 1.176166e-49 | 6.264981e-47 |
| MsG0180005272.01 | MsG0380017810.01 | 0.827413 | 1.586488e-54 | 1.530603e-51 |
| MsG0380017810.01 | MsG0380018051.01 | 0.820656 | 6.113448e-53 | 4.866130e-50 |
| MsG0380017810.01 | MsG0480019304.01 | 0.806553 | 7.778149e-50 | 4.234301e-47 |
| MsG0380017810.01 | MsG0580027797.01 | 0.818646 | 1.758037e-52 | 1.323492e-49 |
| MsG0380017810.01 | MsG0680030960.01 | 0.801553 | 8.527360e-49 | 4.084148e-46 |
| MsG0380017810.01 | MsG0780037182.01 | 0.814224 | 1.717925e-51 | 1.146027e-48 |
| MsG0380017810.01 | MsG0780041025.01 | 0.808629 | 2.818925e-50 | 1.619790e-47 |
| MsG0280010240.01 | MsG0380017810.01 | 0.807093 | 5.980019e-50 | 3.300988e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017810.01.T01 | MTR_3g112410 | 70.270 | 111 | 33 | 0 | 2 | 112 | 3 | 113 | 1.92e-56 | 171 |
| MsG0380017810.01.T01 | MTR_1g023140 | 69.091 | 110 | 34 | 0 | 2 | 111 | 3 | 112 | 1.18e-54 | 166 |
| MsG0380017810.01.T01 | MTR_5g021180 | 59.483 | 116 | 47 | 0 | 2 | 117 | 5 | 120 | 1.69e-50 | 156 |
| MsG0380017810.01.T01 | MTR_3g112400 | 67.647 | 102 | 13 | 3 | 1 | 102 | 1 | 82 | 5.14e-38 | 123 |
| MsG0380017810.01.T01 | MTR_7g009070 | 46.667 | 105 | 56 | 0 | 7 | 111 | 28 | 132 | 1.23e-31 | 108 |
| MsG0380017810.01.T01 | MTR_8g005320 | 40.385 | 104 | 62 | 0 | 5 | 108 | 26 | 129 | 1.53e-31 | 108 |
| MsG0380017810.01.T01 | MTR_8g006685 | 40.385 | 104 | 62 | 0 | 5 | 108 | 95 | 198 | 5.25e-31 | 109 |
| MsG0380017810.01.T01 | MTR_8g006560 | 40.385 | 104 | 62 | 0 | 5 | 108 | 95 | 198 | 5.25e-31 | 109 |
| MsG0380017810.01.T01 | MTR_7g073680 | 43.000 | 100 | 57 | 0 | 5 | 104 | 24 | 123 | 1.45e-30 | 106 |
| MsG0380017810.01.T01 | MTR_8g107460 | 41.818 | 110 | 64 | 0 | 3 | 112 | 252 | 361 | 1.22e-28 | 107 |
| MsG0380017810.01.T01 | MTR_2g010750 | 42.241 | 116 | 65 | 1 | 4 | 117 | 8 | 123 | 7.83e-28 | 99.0 |
| MsG0380017810.01.T01 | MTR_2g082590 | 43.119 | 109 | 62 | 0 | 3 | 111 | 8 | 116 | 6.06e-27 | 96.7 |
| MsG0380017810.01.T01 | MTR_5g037950 | 45.794 | 107 | 58 | 0 | 7 | 113 | 21 | 127 | 1.04e-26 | 96.3 |
| MsG0380017810.01.T01 | MTR_4g081380 | 40.351 | 114 | 68 | 0 | 3 | 116 | 8 | 121 | 2.54e-25 | 92.8 |
| MsG0380017810.01.T01 | MTR_5g037890 | 43.119 | 109 | 62 | 0 | 2 | 110 | 15 | 123 | 3.41e-25 | 92.4 |
| MsG0380017810.01.T01 | MTR_5g037930 | 40.952 | 105 | 62 | 0 | 7 | 111 | 22 | 126 | 1.33e-24 | 90.9 |
| MsG0380017810.01.T01 | MTR_2g082590 | 38.525 | 122 | 62 | 1 | 3 | 111 | 8 | 129 | 1.22e-23 | 88.6 |
| MsG0380017810.01.T01 | MTR_4g094690 | 35.238 | 105 | 66 | 1 | 8 | 110 | 62 | 166 | 1.02e-19 | 79.7 |
| MsG0380017810.01.T01 | MTR_7g080250 | 38.938 | 113 | 63 | 3 | 5 | 116 | 75 | 182 | 1.16e-18 | 77.0 |
| MsG0380017810.01.T01 | MTR_3g089065 | 37.000 | 100 | 58 | 3 | 14 | 111 | 76 | 172 | 1.17e-15 | 69.3 |
| MsG0380017810.01.T01 | MTR_2g010750 | 37.778 | 90 | 50 | 1 | 4 | 93 | 8 | 91 | 2.07e-15 | 66.6 |
| MsG0380017810.01.T01 | MTR_1g098660 | 35.526 | 76 | 48 | 1 | 25 | 99 | 76 | 151 | 4.01e-15 | 67.8 |
| MsG0380017810.01.T01 | MTR_1g026125 | 31.193 | 109 | 71 | 2 | 7 | 111 | 183 | 291 | 5.18e-13 | 63.9 |
| MsG0380017810.01.T01 | MTR_4g081380 | 38.571 | 70 | 43 | 0 | 3 | 72 | 8 | 77 | 1.71e-12 | 58.9 |
| MsG0380017810.01.T01 | MTR_3g435370 | 32.967 | 91 | 57 | 2 | 4 | 92 | 86 | 174 | 3.27e-12 | 61.2 |
| MsG0380017810.01.T01 | MTR_8g059015 | 33.708 | 89 | 57 | 2 | 25 | 111 | 87 | 175 | 3.65e-12 | 60.1 |
| MsG0380017810.01.T01 | MTR_2g079420 | 31.250 | 112 | 74 | 3 | 2 | 111 | 62 | 172 | 3.82e-12 | 60.1 |
| MsG0380017810.01.T01 | MTR_3g435370 | 32.967 | 91 | 57 | 2 | 4 | 92 | 86 | 174 | 4.30e-12 | 60.8 |
| MsG0380017810.01.T01 | MTR_7g102130 | 34.667 | 75 | 47 | 1 | 31 | 105 | 49 | 121 | 1.88e-11 | 57.4 |
| MsG0380017810.01.T01 | MTR_1g114290 | 35.821 | 67 | 42 | 1 | 26 | 91 | 85 | 151 | 2.27e-11 | 58.2 |
| MsG0380017810.01.T01 | MTR_6g092700 | 29.545 | 88 | 58 | 2 | 7 | 92 | 77 | 162 | 2.52e-11 | 58.5 |
| MsG0380017810.01.T01 | MTR_4g088905 | 29.245 | 106 | 71 | 1 | 5 | 110 | 3 | 104 | 8.57e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380017810.01.T01 | AT3G51030 | 66.364 | 110 | 37 | 0 | 2 | 111 | 3 | 112 | 4.40e-54 | 165 |
| MsG0380017810.01.T01 | AT5G42980 | 58.559 | 111 | 46 | 0 | 1 | 111 | 1 | 111 | 2.64e-46 | 145 |
| MsG0380017810.01.T01 | AT1G45145 | 56.250 | 112 | 49 | 0 | 1 | 112 | 1 | 112 | 7.72e-46 | 144 |
| MsG0380017810.01.T01 | AT1G19730 | 53.571 | 112 | 51 | 1 | 2 | 112 | 3 | 114 | 1.77e-39 | 128 |
| MsG0380017810.01.T01 | AT3G08710 | 44.231 | 104 | 58 | 0 | 5 | 108 | 23 | 126 | 2.73e-31 | 108 |
| MsG0380017810.01.T01 | AT3G08710 | 44.231 | 104 | 58 | 0 | 5 | 108 | 23 | 126 | 2.73e-31 | 108 |
| MsG0380017810.01.T01 | AT3G08710 | 44.231 | 104 | 58 | 0 | 5 | 108 | 23 | 126 | 2.73e-31 | 108 |
| MsG0380017810.01.T01 | AT5G39950 | 44.954 | 109 | 60 | 0 | 2 | 110 | 22 | 130 | 5.46e-30 | 104 |
| MsG0380017810.01.T01 | AT1G11530 | 43.363 | 113 | 64 | 0 | 5 | 117 | 2 | 114 | 3.64e-28 | 99.8 |
| MsG0380017810.01.T01 | AT3G17880 | 40.367 | 109 | 65 | 0 | 4 | 112 | 262 | 370 | 3.77e-28 | 105 |
| MsG0380017810.01.T01 | AT3G17880 | 40.367 | 109 | 65 | 0 | 4 | 112 | 269 | 377 | 4.75e-28 | 105 |
| MsG0380017810.01.T01 | AT3G56420 | 42.157 | 102 | 59 | 0 | 4 | 105 | 39 | 140 | 5.50e-28 | 100 |
| MsG0380017810.01.T01 | AT3G56420 | 42.157 | 102 | 59 | 0 | 4 | 105 | 39 | 140 | 5.50e-28 | 100 |
| MsG0380017810.01.T01 | AT3G56420 | 42.157 | 102 | 59 | 0 | 4 | 105 | 39 | 140 | 5.50e-28 | 100 |
| MsG0380017810.01.T01 | AT1G69880 | 39.623 | 106 | 64 | 0 | 7 | 112 | 39 | 144 | 2.31e-25 | 93.6 |
| MsG0380017810.01.T01 | AT2G40790 | 40.196 | 102 | 61 | 0 | 4 | 105 | 39 | 140 | 2.45e-25 | 93.6 |
| MsG0380017810.01.T01 | AT2G40790 | 40.196 | 102 | 61 | 0 | 4 | 105 | 39 | 140 | 2.45e-25 | 93.6 |
| MsG0380017810.01.T01 | AT1G59730 | 37.168 | 113 | 71 | 0 | 1 | 113 | 17 | 129 | 2.09e-24 | 90.5 |
| MsG0380017810.01.T01 | AT2G35010 | 39.806 | 103 | 60 | 1 | 4 | 104 | 83 | 185 | 1.92e-19 | 79.7 |
| MsG0380017810.01.T01 | AT2G35010 | 39.806 | 103 | 60 | 1 | 4 | 104 | 83 | 185 | 1.92e-19 | 79.7 |
| MsG0380017810.01.T01 | AT5G16400 | 35.849 | 106 | 64 | 2 | 5 | 109 | 78 | 180 | 5.41e-17 | 72.8 |
| MsG0380017810.01.T01 | AT1G31020 | 35.514 | 107 | 67 | 1 | 2 | 106 | 46 | 152 | 5.78e-17 | 72.4 |
| MsG0380017810.01.T01 | AT3G02730 | 36.792 | 106 | 63 | 2 | 5 | 109 | 68 | 170 | 1.12e-16 | 72.0 |
| MsG0380017810.01.T01 | AT1G43560 | 35.065 | 77 | 49 | 1 | 24 | 99 | 73 | 149 | 2.45e-15 | 68.2 |
| MsG0380017810.01.T01 | AT1G76760 | 34.211 | 76 | 49 | 1 | 25 | 99 | 79 | 154 | 6.25e-15 | 67.4 |
| MsG0380017810.01.T01 | AT1G07700 | 33.663 | 101 | 59 | 2 | 20 | 112 | 100 | 200 | 9.28e-13 | 62.0 |
| MsG0380017810.01.T01 | AT1G07700 | 33.663 | 101 | 59 | 2 | 20 | 112 | 100 | 200 | 9.28e-13 | 62.0 |
| MsG0380017810.01.T01 | AT1G07700 | 33.663 | 101 | 59 | 2 | 20 | 112 | 100 | 200 | 9.28e-13 | 62.0 |
| MsG0380017810.01.T01 | AT1G07700 | 33.663 | 101 | 59 | 2 | 20 | 112 | 113 | 213 | 1.72e-12 | 61.6 |
| MsG0380017810.01.T01 | AT4G26160 | 30.488 | 82 | 55 | 1 | 7 | 88 | 95 | 174 | 5.96e-12 | 60.5 |
| MsG0380017810.01.T01 | AT4G03520 | 29.245 | 106 | 70 | 3 | 8 | 111 | 82 | 184 | 6.64e-12 | 59.7 |
| MsG0380017810.01.T01 | AT1G76080 | 29.091 | 110 | 74 | 2 | 7 | 112 | 187 | 296 | 8.78e-11 | 57.8 |
Find 31 sgRNAs with CRISPR-Local
Find 49 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTGGAGTCATTTCCCTTC+TGG | 0.238843 | 3:+100882303 | None:intergenic |
| TAGTTGATCTTACTGCTTCT+TGG | 0.265306 | 3:-100882105 | MsG0380017810.01.T01:CDS |
| TAATAAGACTGAGCTGAATT+CGG | 0.378699 | 3:-100881760 | MsG0380017810.01.T01:CDS |
| ATTCATCCACGTCAACCTTA+AGG | 0.389106 | 3:+100882014 | None:intergenic |
| AATAAGACTGAGCTGAATTC+GGG | 0.398840 | 3:-100881759 | MsG0380017810.01.T01:CDS |
| GCCAGATGTCACCTTCCTTA+AGG | 0.403432 | 3:-100882029 | MsG0380017810.01.T01:CDS |
| GATTTAACCAACCAGTTTGT+TGG | 0.404325 | 3:+100882286 | None:intergenic |
| GCTTTCCTTCTTTCAAGAAC+AGG | 0.406276 | 3:+100881805 | None:intergenic |
| GGGAAATGACTCCAACAAAC+TGG | 0.461512 | 3:-100882297 | MsG0380017810.01.T01:intron |
| ACATTCCTGTTCTTGAAAGA+AGG | 0.465257 | 3:-100881810 | MsG0380017810.01.T01:CDS |
| ACCTTAAGGAAGGTGACATC+TGG | 0.488781 | 3:+100882028 | None:intergenic |
| AAATCCACAGTGTTGAGGCT+TGG | 0.494177 | 3:-100882337 | MsG0380017810.01.T01:CDS |
| TTCAGACTGTTGCTGAGGAG+TGG | 0.502035 | 3:-100881851 | MsG0380017810.01.T01:intron |
| TCAGACTGTTGCTGAGGAGT+GGG | 0.502412 | 3:-100881850 | MsG0380017810.01.T01:intron |
| GATCTTACTGCTTCTTGGTG+TGG | 0.514931 | 3:-100882100 | MsG0380017810.01.T01:CDS |
| AAAGCTAGTGAACAAGGTTG+TGG | 0.516587 | 3:-100881787 | MsG0380017810.01.T01:CDS |
| AAGCTAGTGAACAAGGTTGT+GGG | 0.524835 | 3:-100881786 | MsG0380017810.01.T01:CDS |
| CACCTTCCTTAAGGTTGACG+TGG | 0.565554 | 3:-100882020 | MsG0380017810.01.T01:CDS |
| AGAAGGAAAGCTAGTGAACA+AGG | 0.575053 | 3:-100881793 | MsG0380017810.01.T01:CDS |
| ATTTCTTCAGACTGTTGCTG+AGG | 0.578897 | 3:-100881856 | MsG0380017810.01.T01:intron |
| GATTGAAATCCACAGTGTTG+AGG | 0.593831 | 3:-100882342 | MsG0380017810.01.T01:CDS |
| GAGTAGATAAGTACTCCGTC+CGG | 0.599346 | 3:-100881737 | MsG0380017810.01.T01:CDS |
| TTGGAACGAACAAATCCAGA+AGG | 0.609233 | 3:-100882318 | MsG0380017810.01.T01:CDS |
| TCGCAGAGTTGGCTCAAAAG+CGG | 0.612847 | 3:-100882051 | MsG0380017810.01.T01:CDS |
| AATGGGGCAATGAAACGGCA+TGG | 0.612943 | 3:+100882076 | None:intergenic |
| TCTTTCAAGAACAGGAATGT+CGG | 0.617427 | 3:+100881813 | None:intergenic |
| CAAGAACAGGAATGTCGGCA+TGG | 0.627664 | 3:+100881818 | None:intergenic |
| ATCCACGTCAACCTTAAGGA+AGG | 0.640907 | 3:+100882018 | None:intergenic |
| CTAGTGAACAAGGTTGTGGG+TGG | 0.677639 | 3:-100881783 | MsG0380017810.01.T01:CDS |
| CGTTCCAAGCCTCAACACTG+TGG | 0.688562 | 3:+100882333 | None:intergenic |
| TGGAACGAACAAATCCAGAA+GGG | 0.692449 | 3:-100882317 | MsG0380017810.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAGGGTAATTAATTAA+AGG | + | Chr3:100882215-100882234 | None:intergenic | 15.0% |
| !! | TCTTAAACACATACAAAATA+TGG | + | Chr3:100881885-100881904 | None:intergenic | 20.0% |
| ! | AAGACTGTTATTGAAGATTA+TGG | - | Chr3:100881901-100881920 | MsG0380017810.01.T01:intron | 25.0% |
| ! | AAGGTCAAAGATTTAACATA+AGG | + | Chr3:100881844-100881863 | None:intergenic | 25.0% |
| ! | CAAAGATTTAACATAAGGAT+AGG | + | Chr3:100881839-100881858 | None:intergenic | 25.0% |
| ! | GCAGTTAAAAATTCTAACAA+AGG | + | Chr3:100881863-100881882 | None:intergenic | 25.0% |
| GTTCTTCTAGATTAATCTTC+AGG | + | Chr3:100882170-100882189 | None:intergenic | 30.0% | |
| TAAGGATAGGAAATATGAGA+AGG | + | Chr3:100881826-100881845 | None:intergenic | 30.0% | |
| TAATAAGACTGAGCTGAATT+CGG | - | Chr3:100882327-100882346 | MsG0380017810.01.T01:CDS | 30.0% | |
| TACGTGACATGACATTATTA+TGG | - | Chr3:100882129-100882148 | MsG0380017810.01.T01:intron | 30.0% | |
| AATAAGACTGAGCTGAATTC+GGG | - | Chr3:100882328-100882347 | MsG0380017810.01.T01:CDS | 35.0% | |
| ACATTCCTGTTCTTGAAAGA+AGG | - | Chr3:100882277-100882296 | MsG0380017810.01.T01:intron | 35.0% | |
| AGCAACAGTCTGAAGAAATT+AGG | + | Chr3:100882230-100882249 | None:intergenic | 35.0% | |
| ATTGAAGATTATGGCATCGT+TGG | - | Chr3:100881910-100881929 | MsG0380017810.01.T01:intron | 35.0% | |
| GATTTAACCAACCAGTTTGT+TGG | + | Chr3:100881804-100881823 | None:intergenic | 35.0% | |
| GCAACAGTCTGAAGAAATTA+GGG | + | Chr3:100882229-100882248 | None:intergenic | 35.0% | |
| TAGTTGATCTTACTGCTTCT+TGG | - | Chr3:100881982-100882001 | MsG0380017810.01.T01:intron | 35.0% | |
| TCTTTCAAGAACAGGAATGT+CGG | + | Chr3:100882277-100882296 | None:intergenic | 35.0% | |
| AAAGCTAGTGAACAAGGTTG+TGG | - | Chr3:100882300-100882319 | MsG0380017810.01.T01:CDS | 40.0% | |
| AAGCTAGTGAACAAGGTTGT+GGG | - | Chr3:100882301-100882320 | MsG0380017810.01.T01:CDS | 40.0% | |
| AATGACTCCAACAAACTGGT+TGG | - | Chr3:100881794-100881813 | MsG0380017810.01.T01:CDS | 40.0% | |
| AGAAGGAAAGCTAGTGAACA+AGG | - | Chr3:100882294-100882313 | MsG0380017810.01.T01:intron | 40.0% | |
| ATTCATCCACGTCAACCTTA+AGG | + | Chr3:100882076-100882095 | None:intergenic | 40.0% | |
| ATTTCTTCAGACTGTTGCTG+AGG | - | Chr3:100882231-100882250 | MsG0380017810.01.T01:intron | 40.0% | |
| CGAAAAATGGGGCAATGAAA+CGG | + | Chr3:100882019-100882038 | None:intergenic | 40.0% | |
| GATTGAAATCCACAGTGTTG+AGG | - | Chr3:100881745-100881764 | MsG0380017810.01.T01:CDS | 40.0% | |
| GCTTTCCTTCTTTCAAGAAC+AGG | + | Chr3:100882285-100882304 | None:intergenic | 40.0% | |
| TGGAACGAACAAATCCAGAA+GGG | - | Chr3:100881770-100881789 | MsG0380017810.01.T01:CDS | 40.0% | |
| TTGGAACGAACAAATCCAGA+AGG | - | Chr3:100881769-100881788 | MsG0380017810.01.T01:CDS | 40.0% | |
| ACCTTAAGGAAGGTGACATC+TGG | + | Chr3:100882062-100882081 | None:intergenic | 45.0% | |
| AGCCAACTCTGCGAAAAATG+GGG | + | Chr3:100882030-100882049 | None:intergenic | 45.0% | |
| ATCCACGTCAACCTTAAGGA+AGG | + | Chr3:100882072-100882091 | None:intergenic | 45.0% | |
| GAGCCAACTCTGCGAAAAAT+GGG | + | Chr3:100882031-100882050 | None:intergenic | 45.0% | |
| GAGTAGATAAGTACTCCGTC+CGG | - | Chr3:100882350-100882369 | MsG0380017810.01.T01:CDS | 45.0% | |
| GATCTTACTGCTTCTTGGTG+TGG | - | Chr3:100881987-100882006 | MsG0380017810.01.T01:intron | 45.0% | |
| GGGAAATGACTCCAACAAAC+TGG | - | Chr3:100881790-100881809 | MsG0380017810.01.T01:CDS | 45.0% | |
| TGAGCCAACTCTGCGAAAAA+TGG | + | Chr3:100882032-100882051 | None:intergenic | 45.0% | |
| TGTTGGAGTCATTTCCCTTC+TGG | + | Chr3:100881787-100881806 | None:intergenic | 45.0% | |
| ! | AAATCCACAGTGTTGAGGCT+TGG | - | Chr3:100881750-100881769 | MsG0380017810.01.T01:CDS | 45.0% |
| AATGGGGCAATGAAACGGCA+TGG | + | Chr3:100882014-100882033 | None:intergenic | 50.0% | |
| CAAGAACAGGAATGTCGGCA+TGG | + | Chr3:100882272-100882291 | None:intergenic | 50.0% | |
| CACCTTCCTTAAGGTTGACG+TGG | - | Chr3:100882067-100882086 | MsG0380017810.01.T01:CDS | 50.0% | |
| CTAGTGAACAAGGTTGTGGG+TGG | - | Chr3:100882304-100882323 | MsG0380017810.01.T01:CDS | 50.0% | |
| GCCAGATGTCACCTTCCTTA+AGG | - | Chr3:100882058-100882077 | MsG0380017810.01.T01:CDS | 50.0% | |
| TCAGACTGTTGCTGAGGAGT+GGG | - | Chr3:100882237-100882256 | MsG0380017810.01.T01:intron | 50.0% | |
| TTCAGACTGTTGCTGAGGAG+TGG | - | Chr3:100882236-100882255 | MsG0380017810.01.T01:intron | 50.0% | |
| ! | TCGCAGAGTTGGCTCAAAAG+CGG | - | Chr3:100882036-100882055 | MsG0380017810.01.T01:CDS | 50.0% |
| !! | TGCCCCATTTTTCGCAGAGT+TGG | - | Chr3:100882025-100882044 | MsG0380017810.01.T01:CDS | 50.0% |
| CGTTCCAAGCCTCAACACTG+TGG | + | Chr3:100881757-100881776 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 100881725 | 100882384 | 100881725 | ID=MsG0380017810.01;Name=MsG0380017810.01 |
| Chr3 | mRNA | 100881725 | 100882384 | 100881725 | ID=MsG0380017810.01.T01;Parent=MsG0380017810.01;Name=MsG0380017810.01.T01;_AED=0.47;_eAED=0.47;_QI=0|0|0|1|1|1|3|0|117 |
| Chr3 | exon | 100882298 | 100882384 | 100882298 | ID=MsG0380017810.01.T01:exon:13087;Parent=MsG0380017810.01.T01 |
| Chr3 | exon | 100882009 | 100882131 | 100882009 | ID=MsG0380017810.01.T01:exon:13086;Parent=MsG0380017810.01.T01 |
| Chr3 | exon | 100881725 | 100881868 | 100881725 | ID=MsG0380017810.01.T01:exon:13085;Parent=MsG0380017810.01.T01 |
| Chr3 | CDS | 100882298 | 100882384 | 100882298 | ID=MsG0380017810.01.T01:cds;Parent=MsG0380017810.01.T01 |
| Chr3 | CDS | 100882009 | 100882131 | 100882009 | ID=MsG0380017810.01.T01:cds;Parent=MsG0380017810.01.T01 |
| Chr3 | CDS | 100881725 | 100881868 | 100881725 | ID=MsG0380017810.01.T01:cds;Parent=MsG0380017810.01.T01 |
| Gene Sequence |
| Protein sequence |
