AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780037182.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037182.01.T01 MTR_7g029290 97.284 405 11 0 1 405 1 405 0.0 816
MsG0780037182.01.T01 MTR_6g023805 62.376 404 130 6 12 403 12 405 1.43e-168 478
MsG0780037182.01.T01 MTR_2g094093 38.841 345 203 6 59 401 24 362 6.80e-76 240
MsG0780037182.01.T01 MTR_4g108280 36.119 371 214 10 45 401 17 378 2.37e-70 226
MsG0780037182.01.T01 MTR_0345s0010 37.466 371 213 11 40 401 73 433 3.83e-69 225
MsG0780037182.01.T01 MTR_0105s0020 37.466 371 213 11 40 401 73 433 4.64e-69 224
MsG0780037182.01.T01 MTR_0105s0130 37.466 371 213 11 40 401 73 433 1.39e-68 223
MsG0780037182.01.T01 MTR_0105s0170 37.197 371 214 11 40 401 86 446 5.55e-68 222
MsG0780037182.01.T01 MTR_0496s0010 38.095 378 195 14 40 401 55 409 1.00e-67 220
MsG0780037182.01.T01 MTR_0105s0040 37.197 371 214 11 40 401 171 531 2.16e-67 223
MsG0780037182.01.T01 MTR_4g022260 36.508 378 207 13 40 401 55 415 5.80e-67 219
MsG0780037182.01.T01 MTR_5g039390 37.173 382 219 11 32 401 102 474 1.06e-66 219
MsG0780037182.01.T01 MTR_8g468030 38.663 344 194 9 66 401 161 495 1.22e-66 220
MsG0780037182.01.T01 MTR_1330s0010 37.571 354 204 10 40 384 86 431 4.11e-66 217
MsG0780037182.01.T01 MTR_4g022400 35.342 365 219 9 45 401 57 412 4.42e-66 216
MsG0780037182.01.T01 MTR_8g085600 27.476 313 205 11 23 325 45 345 7.37e-24 103
MsG0780037182.01.T01 MTR_4g114110 25.168 298 198 10 36 325 69 349 1.93e-18 87.0
MsG0780037182.01.T01 MTR_3g073640 25.217 230 157 5 58 281 46 266 3.11e-16 80.9
MsG0780037182.01.T01 MTR_7g095220 25.957 235 145 8 59 275 8 231 1.41e-14 74.7
MsG0780037182.01.T01 MTR_3g085570 24.272 309 201 11 59 352 39 329 3.77e-13 70.9
MsG0780037182.01.T01 MTR_2g019230 23.427 286 198 9 59 331 56 333 1.46e-11 65.9
MsG0780037182.01.T01 MTR_2g012790 28.485 165 102 3 165 319 109 267 2.32e-11 65.1
MsG0780037182.01.T01 MTR_2g008440 25.272 368 200 14 58 353 46 410 2.34e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037182.01.T01 AT3G27150 50.746 402 175 6 25 403 21 422 6.84e-133 388
MsG0780037182.01.T01 AT3G27150 50.746 402 175 6 25 403 21 422 6.84e-133 388
MsG0780037182.01.T01 AT5G40680 47.757 379 192 4 31 403 37 415 5.86e-119 352
MsG0780037182.01.T01 AT5G60570 39.884 346 198 7 59 401 53 391 1.24e-71 230
MsG0780037182.01.T01 AT5G60570 39.884 346 198 7 59 401 53 391 1.24e-71 230
MsG0780037182.01.T01 AT5G60570 39.884 346 198 7 59 401 53 391 1.24e-71 230
MsG0780037182.01.T01 AT1G14330 39.650 343 192 9 66 401 105 439 1.40e-69 226
MsG0780037182.01.T01 AT2G02870 37.662 385 210 12 39 401 89 465 8.39e-67 219
MsG0780037182.01.T01 AT2G02870 37.662 385 210 12 39 401 89 465 8.39e-67 219
MsG0780037182.01.T01 AT2G02870 37.662 385 210 12 39 401 89 465 8.39e-67 219
MsG0780037182.01.T01 AT1G74510 37.288 354 190 9 68 401 108 449 8.57e-64 211
MsG0780037182.01.T01 AT1G74510 37.288 354 190 9 68 401 108 449 8.57e-64 211
MsG0780037182.01.T01 AT1G74510 37.288 354 190 9 68 401 108 449 8.57e-64 211
MsG0780037182.01.T01 AT1G26930 36.074 377 207 10 40 401 62 419 3.03e-63 209
MsG0780037182.01.T01 AT1G26930 30.769 377 175 12 40 401 62 367 2.75e-41 150
MsG0780037182.01.T01 AT1G55270 25.641 312 214 8 23 326 46 347 1.33e-20 93.6
MsG0780037182.01.T01 AT4G35120 30.000 180 119 4 58 231 29 207 8.63e-13 69.7
MsG0780037182.01.T01 AT3G63220 24.510 306 186 13 68 355 17 295 1.55e-12 68.6
MsG0780037182.01.T01 AT3G63220 24.510 306 186 13 68 355 24 302 1.57e-12 68.9
MsG0780037182.01.T01 AT3G63220 24.510 306 186 13 68 355 24 302 1.57e-12 68.9
MsG0780037182.01.T01 AT1G60570 25.574 305 197 10 37 326 2 291 5.18e-12 67.4
MsG0780037182.01.T01 AT1G22040 26.180 233 150 7 58 281 46 265 1.92e-11 65.9
MsG0780037182.01.T01 AT1G16250 22.074 376 258 10 59 405 12 381 5.65e-11 64.3
MsG0780037182.01.T01 AT1G16250 22.074 376 258 10 59 405 12 381 5.65e-11 64.3
MsG0780037182.01.T01 AT1G55270 25.500 200 134 7 132 326 32 221 6.16e-11 63.5
MsG0780037182.01.T01 AT4G29370 29.000 200 119 8 44 231 14 202 6.75e-11 63.9

Find 80 sgRNAs with CRISPR-Local

Find 97 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCATTACCAGTTCCAAATTT+TGG 0.192456 7:-21367967 MsG0780037182.01.T01:CDS
AAACACCTATAGCGAAATTT+TGG 0.201938 7:-21367362 MsG0780037182.01.T01:CDS
GGGTCAGAGTTATTTGTTTC+GGG 0.227464 7:-21367529 MsG0780037182.01.T01:CDS
TCAGATTACAGCTTTGAATT+TGG 0.229608 7:-21367574 MsG0780037182.01.T01:CDS
GACAAGAGATTCTATGTTAT+TGG 0.250445 7:-21367247 MsG0780037182.01.T01:CDS
AATTCGACGGACCTGTTCTT+TGG 0.257313 7:-21367501 MsG0780037182.01.T01:CDS
GGTGATGAGTTACTTGTTAT+TGG 0.263196 7:-21366944 MsG0780037182.01.T01:CDS
TAAAAGTCACTACCAAAATT+TGG 0.271448 7:+21367955 None:intergenic
ATTTGAAAGGGATCAATAAT+TGG 0.292774 7:-21367036 MsG0780037182.01.T01:CDS
CTATTTGCTTCAGCTAGTTC+TGG 0.294486 7:-21367418 MsG0780037182.01.T01:CDS
GCGGCGAGATCTACAAAATA+AGG 0.302206 7:-21367708 MsG0780037182.01.T01:CDS
AGTTTCCAATGTTGTGATCT+TGG 0.305480 7:+21367769 None:intergenic
AGCTGATGCACAAGGTGGTT+GGG 0.325783 7:-21366987 MsG0780037182.01.T01:CDS
GGGGTCAGAGTTATTTGTTT+CGG 0.340092 7:-21367530 MsG0780037182.01.T01:CDS
TTCGCATAAAGAACGGGCTT+TGG 0.361752 7:-21366909 MsG0780037182.01.T01:CDS
CAGAACTAGCTGAAGCAAAT+AGG 0.366562 7:+21367419 None:intergenic
GTTGAAAGACATTCCACTTT+CGG 0.373291 7:-21367140 MsG0780037182.01.T01:CDS
TTCAGCTTAATCATTTCATT+AGG 0.374102 7:-21366817 MsG0780037182.01.T01:CDS
CATTTCAATTTCTCACCCTC+AGG 0.390524 7:+21366863 None:intergenic
TTCTGTTTCGCATAAAGAAC+GGG 0.392515 7:-21366915 MsG0780037182.01.T01:CDS
CTGTAATCTGATTGAATCCT+TGG 0.399975 7:+21367586 None:intergenic
TTTCTCTTTGAATTCATCTT+CGG 0.405173 7:+21367292 None:intergenic
TGTTCTTTGGCGATATGATT+CGG 0.417794 7:-21367488 MsG0780037182.01.T01:CDS
AATTTCTCACCCTCAGGATC+AGG 0.424534 7:+21366869 None:intergenic
CGAAAGCAATTGGTGGGGTA+TGG 0.427240 7:-21367638 MsG0780037182.01.T01:CDS
TACAAAATAAGGAAAGAGTT+AGG 0.428564 7:-21367697 MsG0780037182.01.T01:CDS
TTTGAATTCATCTTCGGTAA+AGG 0.447083 7:+21367298 None:intergenic
GGAATGTCTTTCAACATGTC+AGG 0.452600 7:+21367148 None:intergenic
CGTTGAAGAACCGTTGCCAT+CGG 0.466850 7:+21367873 None:intergenic
CTGAGGGTGAGAAATTGAAA+TGG 0.473233 7:-21366862 MsG0780037182.01.T01:CDS
TAGCTAGCGGCGAAAGCAAT+TGG 0.476177 7:-21367648 MsG0780037182.01.T01:CDS
AGCTTCCTGCTTGATTTGAA+AGG 0.476416 7:+21367610 None:intergenic
CGAGCTAGAGACATCGATCT+TGG 0.476661 7:-21367800 MsG0780037182.01.T01:CDS
ATTCTATGTTATTGGTGGAC+AGG 0.479496 7:-21367239 MsG0780037182.01.T01:CDS
GAATCATATCGCCAAAGAAC+AGG 0.481427 7:+21367490 None:intergenic
TCACTACCAAAATTTGGAAC+TGG 0.484863 7:+21367961 None:intergenic
AGCTGAAAGTGTATTTGAAA+GGG 0.490575 7:-21367048 MsG0780037182.01.T01:CDS
AATCAAGCAGGAAGCTTCCA+AGG 0.494763 7:-21367603 MsG0780037182.01.T01:CDS
GAGCTGAAAGTGTATTTGAA+AGG 0.497856 7:-21367049 MsG0780037182.01.T01:CDS
AGTGTCCAAAATTTCGCTAT+AGG 0.502571 7:+21367357 None:intergenic
GCTGATGCACAAGGTGGTTG+GGG 0.505520 7:-21366986 MsG0780037182.01.T01:CDS
TAGGAATTGTGCTGTGATGA+TGG 0.506085 7:-21366798 MsG0780037182.01.T01:CDS
GGCGTCGCGTTTAAATCACT+TGG 0.517536 7:-21366965 MsG0780037182.01.T01:CDS
AAATGGAAGCAAATTGATTG+TGG 0.518481 7:-21366845 MsG0780037182.01.T01:CDS
GAAAGAAGAATCTTTACCTC+AGG 0.525784 7:-21367851 MsG0780037182.01.T01:CDS
TACTTGTTGTCCTGATCCTG+AGG 0.533715 7:-21366879 MsG0780037182.01.T01:CDS
AAGAGATTCTATGTTATTGG+TGG 0.534243 7:-21367244 MsG0780037182.01.T01:CDS
CCTTGTGCATCAGCTCTCAC+AGG 0.544876 7:+21366995 None:intergenic
TTACCACCCTCCGATGGCAA+CGG 0.550034 7:-21367883 MsG0780037182.01.T01:CDS
TGAAGAACCGTTGCCATCGG+AGG 0.554907 7:+21367876 None:intergenic
GATTTCCAAGATCACAACAT+TGG 0.554912 7:-21367774 MsG0780037182.01.T01:CDS
GAGCTGATGCACAAGGTGGT+TGG 0.555202 7:-21366988 MsG0780037182.01.T01:CDS
CTTCTGTTTCGCATAAAGAA+CGG 0.555565 7:-21366916 MsG0780037182.01.T01:CDS
ATGATTCGGATACGAATGAA+TGG 0.557903 7:-21367474 MsG0780037182.01.T01:CDS
GATACGAATGAATGGTTCAA+AGG 0.564065 7:-21367466 MsG0780037182.01.T01:CDS
GTCCGTTCATGATTAATCCT+AGG 0.572154 7:-21367444 MsG0780037182.01.T01:CDS
GCAATTGGTGGGGTATGGAA+TGG 0.578887 7:-21367633 MsG0780037182.01.T01:CDS
TAGCGGCGAAAGCAATTGGT+GGG 0.579866 7:-21367644 MsG0780037182.01.T01:CDS
GAAGAACCGTTGCCATCGGA+GGG 0.587612 7:+21367877 None:intergenic
CGTTCTTTATGCGAAACAGA+AGG 0.590947 7:+21366917 None:intergenic
TATTAACAACAGCTATCAGA+GGG 0.594157 7:+21367104 None:intergenic
GGAGAGTGCGAATCCGAAAG+TGG 0.596088 7:+21367127 None:intergenic
ACTTGTTGTCCTGATCCTGA+GGG 0.606724 7:-21366878 MsG0780037182.01.T01:CDS
CACCTAGGATTAATCATGAA+CGG 0.612535 7:+21367442 None:intergenic
AATGGCCTTTCAAATCAAGC+AGG 0.615937 7:-21367615 MsG0780037182.01.T01:CDS
AGGAATTGTGCTGTGATGAT+GGG 0.616810 7:-21366797 MsG0780037182.01.T01:CDS
GTTTCGGGCAAAGAATTCGA+CGG 0.618011 7:-21367514 MsG0780037182.01.T01:CDS
CTAGCGGCGAAAGCAATTGG+TGG 0.628757 7:-21367645 MsG0780037182.01.T01:CDS
GACTTGTTACCACCCTCCGA+TGG 0.633503 7:-21367889 MsG0780037182.01.T01:CDS
TTATTAACAACAGCTATCAG+AGG 0.633695 7:+21367103 None:intergenic
TCGACGAAGAAACAAACACA+TGG 0.634887 7:-21367180 MsG0780037182.01.T01:CDS
GCTGAAGCAAATAGGCACCT+AGG 0.638194 7:+21367427 None:intergenic
GAACCGTTGCCATCGGAGGG+TGG 0.640742 7:+21367880 None:intergenic
CCTGTGAGAGCTGATGCACA+AGG 0.663164 7:-21366995 MsG0780037182.01.T01:CDS
AGCGGCGAAAGCAATTGGTG+GGG 0.663533 7:-21367643 MsG0780037182.01.T01:CDS
AGATTATAATCTGCATCCTG+AGG 0.665618 7:+21367835 None:intergenic
ATTAACAACAGCTATCAGAG+GGG 0.676676 7:+21367105 None:intergenic
TGGACAGGACGAGAATCGAA+AGG 0.677851 7:-21367224 MsG0780037182.01.T01:CDS
TTAACAACAGCTATCAGAGG+GGG 0.692839 7:+21367106 None:intergenic
GTGAGAGCTGATGCACAAGG+TGG 0.739174 7:-21366992 MsG0780037182.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCAATAATTGGAAAAAGTT+GGG - Chr7:21367744-21367763 MsG0780037182.01.T01:CDS 20.0%
! ATGATTCGAAAACAAAAACT+TGG - Chr7:21367445-21367464 MsG0780037182.01.T01:CDS 25.0%
! ATTTGAAAGGGATCAATAAT+TGG - Chr7:21367733-21367752 MsG0780037182.01.T01:CDS 25.0%
! GATCAATAATTGGAAAAAGT+TGG - Chr7:21367743-21367762 MsG0780037182.01.T01:CDS 25.0%
! TAAAAGTCACTACCAAAATT+TGG + Chr7:21366817-21366836 None:intergenic 25.0%
! TACAAAATAAGGAAAGAGTT+AGG - Chr7:21367072-21367091 MsG0780037182.01.T01:CDS 25.0%
! TTCAGCTTAATCATTTCATT+AGG - Chr7:21367952-21367971 MsG0780037182.01.T01:CDS 25.0%
! TTTCTCTTTGAATTCATCTT+CGG + Chr7:21367480-21367499 None:intergenic 25.0%
!! TCAAAGAGAAAATTTTGTTC+AGG - Chr7:21367489-21367508 MsG0780037182.01.T01:CDS 25.0%
!! TGATAAAGAATCATTTTCAG+CGG - Chr7:21367218-21367237 MsG0780037182.01.T01:CDS 25.0%
!!! TTTTTAACTCTGATGAAAAG+CGG - Chr7:21367042-21367061 MsG0780037182.01.T01:CDS 25.0%
AAATGGAAGCAAATTGATTG+TGG - Chr7:21367924-21367943 MsG0780037182.01.T01:CDS 30.0%
AAGAGATTCTATGTTATTGG+TGG - Chr7:21367525-21367544 MsG0780037182.01.T01:CDS 30.0%
GACAAGAGATTCTATGTTAT+TGG - Chr7:21367522-21367541 MsG0780037182.01.T01:CDS 30.0%
TATTAACAACAGCTATCAGA+GGG + Chr7:21367668-21367687 None:intergenic 30.0%
TTATTAACAACAGCTATCAG+AGG + Chr7:21367669-21367688 None:intergenic 30.0%
TTTGAATTCATCTTCGGTAA+AGG + Chr7:21367474-21367493 None:intergenic 30.0%
! AAACACCTATAGCGAAATTT+TGG - Chr7:21367407-21367426 MsG0780037182.01.T01:CDS 30.0%
! AGCTGAAAGTGTATTTGAAA+GGG - Chr7:21367721-21367740 MsG0780037182.01.T01:CDS 30.0%
! ATAAAGAATCATTTTCAGCG+GGG - Chr7:21367220-21367239 MsG0780037182.01.T01:CDS 30.0%
! ATTTTGTTCAGGATGTTACA+TGG - Chr7:21367500-21367519 MsG0780037182.01.T01:CDS 30.0%
! GATAAAGAATCATTTTCAGC+GGG - Chr7:21367219-21367238 MsG0780037182.01.T01:CDS 30.0%
!! TCAGATTACAGCTTTGAATT+TGG - Chr7:21367195-21367214 MsG0780037182.01.T01:CDS 30.0%
AGATTATAATCTGCATCCTG+AGG + Chr7:21366937-21366956 None:intergenic 35.0%
AGTGTCCAAAATTTCGCTAT+AGG + Chr7:21367415-21367434 None:intergenic 35.0%
AGTTTCCAATGTTGTGATCT+TGG + Chr7:21367003-21367022 None:intergenic 35.0%
ATTAACAACAGCTATCAGAG+GGG + Chr7:21367667-21367686 None:intergenic 35.0%
CACCTAGGATTAATCATGAA+CGG + Chr7:21367330-21367349 None:intergenic 35.0%
CTAGCTAACATAAAAACGGA+CGG + Chr7:21367108-21367127 None:intergenic 35.0%
CTGTAATCTGATTGAATCCT+TGG + Chr7:21367186-21367205 None:intergenic 35.0%
CTTCTGTTTCGCATAAAGAA+CGG - Chr7:21367853-21367872 MsG0780037182.01.T01:CDS 35.0%
GAAAGAAGAATCTTTACCTC+AGG - Chr7:21366918-21366937 MsG0780037182.01.T01:CDS 35.0%
GATACGAATGAATGGTTCAA+AGG - Chr7:21367303-21367322 MsG0780037182.01.T01:CDS 35.0%
GATTTCCAAGATCACAACAT+TGG - Chr7:21366995-21367014 MsG0780037182.01.T01:CDS 35.0%
GTTGAAAGACATTCCACTTT+CGG - Chr7:21367629-21367648 MsG0780037182.01.T01:CDS 35.0%
TGTTCTTTGGCGATATGATT+CGG - Chr7:21367281-21367300 MsG0780037182.01.T01:CDS 35.0%
TTCTGTTTCGCATAAAGAAC+GGG - Chr7:21367854-21367873 MsG0780037182.01.T01:CDS 35.0%
! AGAATTCTCATCTTTTGTGC+TGG + Chr7:21366859-21366878 None:intergenic 35.0%
! ATGATTCGGATACGAATGAA+TGG - Chr7:21367295-21367314 MsG0780037182.01.T01:CDS 35.0%
! ATTCTATGTTATTGGTGGAC+AGG - Chr7:21367530-21367549 MsG0780037182.01.T01:CDS 35.0%
! GAGCTGAAAGTGTATTTGAA+AGG - Chr7:21367720-21367739 MsG0780037182.01.T01:CDS 35.0%
! GCATTACCAGTTCCAAATTT+TGG - Chr7:21366802-21366821 MsG0780037182.01.T01:CDS 35.0%
! TCACTACCAAAATTTGGAAC+TGG + Chr7:21366811-21366830 None:intergenic 35.0%
! TCTTTTGTGCTGGAAAATTG+TGG + Chr7:21366849-21366868 None:intergenic 35.0%
!! AATTTTGCTTTTGTTGCAGG+TGG - Chr7:21367375-21367394 MsG0780037182.01.T01:CDS 35.0%
!! GGTAATTTTGCTTTTGTTGC+AGG - Chr7:21367372-21367391 MsG0780037182.01.T01:CDS 35.0%
!! GGTGATGAGTTACTTGTTAT+TGG - Chr7:21367825-21367844 MsG0780037182.01.T01:CDS 35.0%
!! TCCGTTTTTATGTTAGCTAG+CGG - Chr7:21367108-21367127 MsG0780037182.01.T01:CDS 35.0%
AATGGCCTTTCAAATCAAGC+AGG - Chr7:21367154-21367173 MsG0780037182.01.T01:CDS 40.0%
AGGAATTGTGCTGTGATGAT+GGG - Chr7:21367972-21367991 MsG0780037182.01.T01:CDS 40.0%
CAGAACTAGCTGAAGCAAAT+AGG + Chr7:21367353-21367372 None:intergenic 40.0%
CATTTCAATTTCTCACCCTC+AGG + Chr7:21367909-21367928 None:intergenic 40.0%
CGTTCTTTATGCGAAACAGA+AGG + Chr7:21367855-21367874 None:intergenic 40.0%
CTATTTGCTTCAGCTAGTTC+TGG - Chr7:21367351-21367370 MsG0780037182.01.T01:CDS 40.0%
CTGAGGGTGAGAAATTGAAA+TGG - Chr7:21367907-21367926 MsG0780037182.01.T01:CDS 40.0%
GAATCATATCGCCAAAGAAC+AGG + Chr7:21367282-21367301 None:intergenic 40.0%
GCCGCTAGCTAACATAAAAA+CGG + Chr7:21367112-21367131 None:intergenic 40.0%
GGAATGTCTTTCAACATGTC+AGG + Chr7:21367624-21367643 None:intergenic 40.0%
GGGGTCAGAGTTATTTGTTT+CGG - Chr7:21367239-21367258 MsG0780037182.01.T01:CDS 40.0%
GGGTCAGAGTTATTTGTTTC+GGG - Chr7:21367240-21367259 MsG0780037182.01.T01:CDS 40.0%
GTCCGTTCATGATTAATCCT+AGG - Chr7:21367325-21367344 MsG0780037182.01.T01:CDS 40.0%
TAGGAATTGTGCTGTGATGA+TGG - Chr7:21367971-21367990 MsG0780037182.01.T01:CDS 40.0%
TCGACGAAGAAACAAACACA+TGG - Chr7:21367589-21367608 MsG0780037182.01.T01:CDS 40.0%
TTAACAACAGCTATCAGAGG+GGG + Chr7:21367666-21367685 None:intergenic 40.0%
! AGCTTCCTGCTTGATTTGAA+AGG + Chr7:21367162-21367181 None:intergenic 40.0%
AATCAAGCAGGAAGCTTCCA+AGG - Chr7:21367166-21367185 MsG0780037182.01.T01:CDS 45.0%
AATTCGACGGACCTGTTCTT+TGG - Chr7:21367268-21367287 MsG0780037182.01.T01:CDS 45.0%
AATTTCTCACCCTCAGGATC+AGG + Chr7:21367903-21367922 None:intergenic 45.0%
GCGGCGAGATCTACAAAATA+AGG - Chr7:21367061-21367080 MsG0780037182.01.T01:CDS 45.0%
GTTTCGGGCAAAGAATTCGA+CGG - Chr7:21367255-21367274 MsG0780037182.01.T01:CDS 45.0%
! TGCTTTTGTTGCAGGTGGTT+TGG - Chr7:21367380-21367399 MsG0780037182.01.T01:CDS 45.0%
! TTCGCATAAAGAACGGGCTT+TGG - Chr7:21367860-21367879 MsG0780037182.01.T01:CDS 45.0%
!! ACTTGTTGTCCTGATCCTGA+GGG - Chr7:21367891-21367910 MsG0780037182.01.T01:CDS 45.0%
!! TACTTGTTGTCCTGATCCTG+AGG - Chr7:21367890-21367909 MsG0780037182.01.T01:CDS 45.0%
AGCTGATGCACAAGGTGGTT+GGG - Chr7:21367782-21367801 MsG0780037182.01.T01:CDS 50.0%
CGAAAGCAATTGGTGGGGTA+TGG - Chr7:21367131-21367150 MsG0780037182.01.T01:CDS 50.0%
CGAGCTAGAGACATCGATCT+TGG - Chr7:21366969-21366988 MsG0780037182.01.T01:CDS 50.0%
CGTTGAAGAACCGTTGCCAT+CGG + Chr7:21366899-21366918 None:intergenic 50.0%
GCAATTGGTGGGGTATGGAA+TGG - Chr7:21367136-21367155 MsG0780037182.01.T01:CDS 50.0%
GCTGAAGCAAATAGGCACCT+AGG + Chr7:21367345-21367364 None:intergenic 50.0%
GGCGTCGCGTTTAAATCACT+TGG - Chr7:21367804-21367823 MsG0780037182.01.T01:CDS 50.0%
TAGCGGCGAAAGCAATTGGT+GGG - Chr7:21367125-21367144 MsG0780037182.01.T01:CDS 50.0%
TAGCTAGCGGCGAAAGCAAT+TGG - Chr7:21367121-21367140 MsG0780037182.01.T01:CDS 50.0%
TGGACAGGACGAGAATCGAA+AGG - Chr7:21367545-21367564 MsG0780037182.01.T01:CDS 50.0%
AGCGGCGAAAGCAATTGGTG+GGG - Chr7:21367126-21367145 MsG0780037182.01.T01:CDS 55.0%
CCTGTGAGAGCTGATGCACA+AGG - Chr7:21367774-21367793 MsG0780037182.01.T01:CDS 55.0%
CCTTGTGCATCAGCTCTCAC+AGG + Chr7:21367777-21367796 None:intergenic 55.0%
CTAGCGGCGAAAGCAATTGG+TGG - Chr7:21367124-21367143 MsG0780037182.01.T01:CDS 55.0%
GAAGAACCGTTGCCATCGGA+GGG + Chr7:21366895-21366914 None:intergenic 55.0%
GAGCTGATGCACAAGGTGGT+TGG - Chr7:21367781-21367800 MsG0780037182.01.T01:CDS 55.0%
GCTGATGCACAAGGTGGTTG+GGG - Chr7:21367783-21367802 MsG0780037182.01.T01:CDS 55.0%
GTGAGAGCTGATGCACAAGG+TGG - Chr7:21367777-21367796 MsG0780037182.01.T01:CDS 55.0%
TGAAGAACCGTTGCCATCGG+AGG + Chr7:21366896-21366915 None:intergenic 55.0%
TTACCACCCTCCGATGGCAA+CGG - Chr7:21366886-21366905 MsG0780037182.01.T01:CDS 55.0%
! GGAGAGTGCGAATCCGAAAG+TGG + Chr7:21367645-21367664 None:intergenic 55.0%
!! GACTTGTTACCACCCTCCGA+TGG - Chr7:21366880-21366899 MsG0780037182.01.T01:CDS 55.0%
GAACCGTTGCCATCGGAGGG+TGG + Chr7:21366892-21366911 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 21366787 21368004 21366787 ID=MsG0780037182.01;Name=MsG0780037182.01
Chr7 mRNA 21366787 21368004 21366787 ID=MsG0780037182.01.T01;Parent=MsG0780037182.01;Name=MsG0780037182.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|405
Chr7 exon 21366787 21368004 21366787 ID=MsG0780037182.01.T01:exon:4225;Parent=MsG0780037182.01.T01
Chr7 CDS 21366787 21368004 21366787 ID=MsG0780037182.01.T01:cds;Parent=MsG0780037182.01.T01
Gene Sequence

>MsG0780037182.01.T01

ATGACTAATCAAAAAGCATTACCAGTTCCAAATTTTGGTAGTGACTTTTACTTTAGTTACCACAATTTTCCAGCACAAAAGATGAGAATTCTAGACTTGTTACCACCCTCCGATGGCAACGGTTCTTCAACGAAAGAAGAATCTTTACCTCAGGATGCAGATTATAATCTCAGTCTCAGCGACGAGCTAGAGACATCGATCTTGGCGAGATTTCCAAGATCACAACATTGGAAACTATCTTTTCTAAACAAGAGATTTTTAACTCTGATGAAAAGCGGCGAGATCTACAAAATAAGGAAAGAGTTAGGACTCAAAGAACCGTCCGTTTTTATGTTAGCTAGCGGCGAAAGCAATTGGTGGGGTATGGAATGGCCTTTCAAATCAAGCAGGAAGCTTCCAAGGATTCAATCAGATTACAGCTTTGAATTTGGTGATAAAGAATCATTTTCAGCGGGGTCAGAGTTATTTGTTTCGGGCAAAGAATTCGACGGACCTGTTCTTTGGCGATATGATTCGGATACGAATGAATGGTTCAAAGGTCCGTTCATGATTAATCCTAGGTGCCTATTTGCTTCAGCTAGTTCTGGTAATTTTGCTTTTGTTGCAGGTGGTTTGGAAACAAACACCTATAGCGAAATTTTGGACACTGCTGAGAAATATGATTCGAAAACAAAAACTTGGAAACCTTTACCGAAGATGAATTCAAAGAGAAAATTTTGTTCAGGATGTTACATGGACAAGAGATTCTATGTTATTGGTGGACAGGACGAGAATCGAAAGGATCTCATTTCGTGTGAGTTTTTCGACGAAGAAACAAACACATGGAATTTGATTCCTGACATGTTGAAAGACATTCCACTTTCGGATTCGCACTCTCCCCCTCTGATAGCTGTTGTTAATAATGAACTTTATACACTCGATGCTTCTACTAATGAGCTGAAAGTGTATTTGAAAGGGATCAATAATTGGAAAAAGTTGGGCGTTGCGCCTGTGAGAGCTGATGCACAAGGTGGTTGGGGCGTCGCGTTTAAATCACTTGGTGATGAGTTACTTGTTATTGGTGCACCTTCTGTTTCGCATAAAGAACGGGCTTTGGCGATTTATACTTGTTGTCCTGATCCTGAGGGTGAGAAATTGAAATGGAAGCAAATTGATTGTGGAAGTGTTCAGCTTAATCATTTCATTAGGAATTGTGCTGTGATGATGGGAAGTACTTGA

Protein sequence

>MsG0780037182.01.T01

MTNQKALPVPNFGSDFYFSYHNFPAQKMRILDLLPPSDGNGSSTKEESLPQDADYNLSLSDELETSILARFPRSQHWKLSFLNKRFLTLMKSGEIYKIRKELGLKEPSVFMLASGESNWWGMEWPFKSSRKLPRIQSDYSFEFGDKESFSAGSELFVSGKEFDGPVLWRYDSDTNEWFKGPFMINPRCLFASASSGNFAFVAGGLETNTYSEILDTAEKYDSKTKTWKPLPKMNSKRKFCSGCYMDKRFYVIGGQDENRKDLISCEFFDEETNTWNLIPDMLKDIPLSDSHSPPLIAVVNNELYTLDASTNELKVYLKGINNWKKLGVAPVRADAQGGWGVAFKSLGDELLVIGAPSVSHKERALAIYTCCPDPEGEKLKWKQIDCGSVQLNHFIRNCAVMMGST*