AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480022179.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022179.01.T01 MTR_4g083960 92.085 518 4 1 1 481 1 518 0.0 972
MsG0480022179.01.T01 MTR_1g074930 51.601 531 198 10 1 476 1 527 1.24e-173 499
MsG0480022179.01.T01 MTR_1g043290 51.504 532 199 10 1 477 1 528 2.68e-171 493
MsG0480022179.01.T01 MTR_1g043200 51.515 528 201 9 1 477 1 524 2.89e-171 493
MsG0480022179.01.T01 MTR_1g043220 51.316 532 200 10 1 477 1 528 3.98e-171 493
MsG0480022179.01.T01 MTR_3g082700 52.233 515 191 10 1 464 1 511 6.80e-171 492
MsG0480022179.01.T01 MTR_1g069935 50.581 516 200 10 5 471 6 515 2.25e-170 490
MsG0480022179.01.T01 MTR_7g096870 50.000 526 208 11 5 481 6 525 1.12e-164 476
MsG0480022179.01.T01 MTR_7g096880 49.254 536 191 12 5 473 6 527 5.27e-162 469
MsG0480022179.01.T01 MTR_1g074940 49.705 509 193 10 5 464 6 500 1.85e-160 464
MsG0480022179.01.T01 MTR_1g069930 47.538 528 206 12 1 470 1 515 2.78e-157 457
MsG0480022179.01.T01 MTR_1g028600 47.206 519 215 11 4 476 2 507 1.00e-146 430
MsG0480022179.01.T01 MTR_5g068140 45.355 549 213 14 1 477 1 534 2.02e-141 417
MsG0480022179.01.T01 MTR_3g084110 23.958 384 239 11 95 466 128 470 8.20e-16 80.1
MsG0480022179.01.T01 MTR_7g005910 21.705 387 247 11 95 468 133 476 1.89e-13 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022179.01.T01 AT1G76430 59.612 515 154 8 5 470 4 513 0.0 606
MsG0480022179.01.T01 AT1G20860 58.812 522 162 8 5 480 55 569 0.0 592
MsG0480022179.01.T01 AT1G20860 58.812 522 162 8 5 480 3 517 0.0 591
MsG0480022179.01.T01 AT5G43350 51.724 522 193 11 5 473 6 521 1.33e-173 498
MsG0480022179.01.T01 AT5G43360 51.257 517 195 11 5 470 6 516 9.89e-170 488
MsG0480022179.01.T01 AT2G38940 51.252 519 194 13 1 466 1 513 1.20e-167 484
MsG0480022179.01.T01 AT3G54700 50.766 522 199 11 5 476 6 519 4.54e-167 482
MsG0480022179.01.T01 AT3G54700 50.766 522 199 11 5 476 6 519 4.54e-167 482
MsG0480022179.01.T01 AT5G43370 51.916 522 192 11 5 473 6 521 3.58e-163 472
MsG0480022179.01.T01 AT5G43370 51.916 522 192 11 5 473 6 521 3.58e-163 472
MsG0480022179.01.T01 AT2G32830 49.046 524 206 11 3 471 4 521 5.35e-162 469
MsG0480022179.01.T01 AT5G43340 49.119 511 200 10 6 470 8 504 5.18e-156 453
MsG0480022179.01.T01 AT4G08878 48.927 233 68 5 30 215 13 241 1.09e-57 192
MsG0480022179.01.T01 AT4G08895 42.647 136 43 3 281 416 30 130 3.79e-27 107
MsG0480022179.01.T01 AT2G43330 22.081 394 253 10 95 475 131 483 1.49e-14 76.3

Find 133 sgRNAs with CRISPR-Local

Find 287 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTTCTTCTTTGCAAATTT+TGG 0.012899 4:+69336854 MsG0480022179.01.T01:CDS
TCAACATGTCATGGTATTTC+TGG 0.184785 4:+69336932 MsG0480022179.01.T01:CDS
ATGGATTCTCTTCGGTTATT+TGG 0.195842 4:-69336415 None:intergenic
AGAAACTACCTGGCAGTTTC+TGG 0.216451 4:-69334080 None:intergenic
TTGGATCTGTTGGATTTCTT+TGG 0.219700 4:+69336981 MsG0480022179.01.T01:CDS
TGTCTGAGTTTGCTAATAAA+AGG 0.237042 4:+69333841 MsG0480022179.01.T01:CDS
TTTGGTCCAATGAGAGTAAT+AGG 0.245047 4:-69336786 None:intergenic
TATGCAAGGGTTTGGTATAT+TGG 0.253824 4:+69333896 MsG0480022179.01.T01:CDS
CAGCTGCATTGACTTATTAT+TGG 0.282392 4:+69334045 MsG0480022179.01.T01:CDS
GGTTGACTTGACGGATTTCT+TGG 0.294025 4:-69333562 None:intergenic
GCTGTTTGCTCTACCATTCC+CGG 0.304136 4:+69336662 MsG0480022179.01.T01:CDS
TGGATCTGTTGGATTTCTTT+GGG 0.310383 4:+69336982 MsG0480022179.01.T01:CDS
GGCTAGTGCAACTGTTACTA+TGG 0.333298 4:+69333917 MsG0480022179.01.T01:CDS
GGAAACCATGGGAAGATCTT+TGG 0.341697 4:+69337120 MsG0480022179.01.T01:CDS
GCATTTGTGGTTGGTGGTAA+TGG 0.351217 4:-69336434 None:intergenic
AACTCTTTCCAGCTAGGTTC+AGG 0.354273 4:+69336909 MsG0480022179.01.T01:CDS
TCTGGGGCTGTTGGTAAGGT+TGG 0.368628 4:+69336950 MsG0480022179.01.T01:CDS
GGACGCCTCGGAGACCTAAA+AGG 0.373921 4:+69333650 MsG0480022179.01.T01:CDS
GGTTTCCCTATTACTCTCAT+TGG 0.377430 4:+69336780 MsG0480022179.01.T01:CDS
GACATAATGGTAGAAGATAA+AGG 0.378353 4:-69333822 None:intergenic
TTCTTCTTAGGGCTTGGAAT+TGG 0.379282 4:+69333789 MsG0480022179.01.T01:intron
TTCTTAGGGCTTGGAATTGG+TGG 0.382861 4:+69333792 MsG0480022179.01.T01:intron
ATTAGCAAACTCAGACATAA+TGG 0.389302 4:-69333835 None:intergenic
GGTCTCCGAGGCGTCCGAAT+AGG 0.396679 4:-69333643 None:intergenic
ACAATAAAGGTGGTAGTGTT+AGG 0.397982 4:-69336878 None:intergenic
TCATGATAACAAAGGGTTCA+TGG 0.404520 4:+69336817 MsG0480022179.01.T01:CDS
CAACATGTCATGGTATTTCT+GGG 0.410467 4:+69336933 MsG0480022179.01.T01:CDS
AGATCTTCCCATGGTTTCCT+TGG 0.413802 4:-69337116 None:intergenic
CCACGACTGGGTTGACTTGA+CGG 0.422761 4:-69333571 None:intergenic
AAAGGGTTCATGGTTATCTA+TGG 0.427006 4:+69336827 MsG0480022179.01.T01:CDS
TGTTACTATGGTGGTTTGCT+TGG 0.428921 4:+69333929 MsG0480022179.01.T01:CDS
GGTAAGGTTGGTGCAATCAT+TGG 0.429582 4:+69336962 MsG0480022179.01.T01:CDS
TATTTCTGGGGCTGTTGGTA+AGG 0.444891 4:+69336946 MsG0480022179.01.T01:CDS
GCCTTCGGCCAACTCCTATT+CGG 0.447789 4:+69333629 MsG0480022179.01.T01:CDS
AAGAGTTAAAATCCAAATGA+TGG 0.452565 4:+69336721 MsG0480022179.01.T01:CDS
GGTGCAATCATTGGATCTGT+TGG 0.456131 4:+69336971 MsG0480022179.01.T01:CDS
CTTGTCTCCGTCGCACTCCT+AGG 0.457221 4:+69333602 MsG0480022179.01.T01:CDS
GTTGGCCGAAGGCGGTTCCT+AGG 0.459158 4:-69333619 None:intergenic
CGCCGGAGGCTGACGTTGCA+TGG 0.463769 4:+69333994 MsG0480022179.01.T01:CDS
AACACAATACTACCATTTCA+AGG 0.465634 4:+69333439 MsG0480022179.01.T01:CDS
TGGTGGTAATGGATTCTCTT+CGG 0.465888 4:-69336423 None:intergenic
CAGCTGAACTCTTTCCAGCT+AGG 0.466833 4:+69336903 MsG0480022179.01.T01:CDS
GCTTTCATTCCAATCCCCTT+AGG 0.467608 4:-69337034 None:intergenic
CTCCATGCAACGTCAGCCTC+CGG 0.468310 4:-69333996 None:intergenic
GAGTTCAGCTGGGACAATAA+AGG 0.470332 4:-69336891 None:intergenic
ATCGTTTGTATATTTCACTT+TGG 0.472004 4:-69336568 None:intergenic
CTTGGAGGGGTGTGCATAGT+GGG 0.472095 4:+69337070 MsG0480022179.01.T01:CDS
AAGAATTCTCTTGAAAGAAG+AGG 0.472184 4:-69336464 None:intergenic
GAAAATGGCAAGAGGATTGA+AGG 0.478791 4:+69333391 None:intergenic
CATGTTGACCTGAACCTAGC+TGG 0.479877 4:-69336917 None:intergenic
CTAGCTGGAAAGAGTTCAGC+TGG 0.480788 4:-69336902 None:intergenic
AAAGCCTCACTTATCATACT+TGG 0.482489 4:+69337052 MsG0480022179.01.T01:CDS
GGTAGAGCAAACAGCAAGAA+TGG 0.483548 4:-69336654 None:intergenic
CTATGATGATGGCCTTGAAA+TGG 0.485108 4:-69333451 None:intergenic
CAGCGGTTCGAAGCCGGCGA+CGG 0.486295 4:+69333959 MsG0480022179.01.T01:CDS
TTTCACTTTGGAATAGAACT+TGG 0.486743 4:-69336556 None:intergenic
AAGAGGGTAGGCAGCATTTG+TGG 0.490158 4:-69336447 None:intergenic
CATTAGGTATACAGCATTAG+TGG 0.491216 4:+69336334 MsG0480022179.01.T01:intron
TGGAGGTTGATATTGATGAT+TGG 0.491970 4:+69334014 MsG0480022179.01.T01:CDS
GAAGGAGGAAGGATATCCTA+AGG 0.492281 4:+69337018 MsG0480022179.01.T01:CDS
GAGAAAATCATGATAACAAA+GGG 0.493974 4:+69336810 MsG0480022179.01.T01:CDS
ACAAGGGCTGAGACCACGAC+TGG 0.495093 4:-69333584 None:intergenic
ATTTCGCAGCGGTTCGAAGC+CGG 0.495311 4:+69333953 MsG0480022179.01.T01:CDS
TTGCAAGATGGAAAGCCTCT+TGG 0.498386 4:-69336622 None:intergenic
GCCTCACTTATCATACTTGG+AGG 0.509162 4:+69337055 MsG0480022179.01.T01:CDS
TTGACGGATTTCTTGGTGGT+CGG 0.509656 4:-69333555 None:intergenic
TGGCTTGGATTCTTGCAAGA+TGG 0.513731 4:-69336634 None:intergenic
TTGGTCCAATGAGAGTAATA+GGG 0.517347 4:-69336785 None:intergenic
GAAGGATATCCTAAGGGGAT+TGG 0.519052 4:+69337025 MsG0480022179.01.T01:CDS
GCCATCATCATAGCAGGAAT+GGG 0.519478 4:+69333461 MsG0480022179.01.T01:CDS
ACTTGGAGGGGTGTGCATAG+TGG 0.520704 4:+69337069 MsG0480022179.01.T01:CDS
TCCCATTCCTGCTATGATGA+TGG 0.520757 4:-69333462 None:intergenic
AAGATCTTTGGAAGAAAATG+AGG 0.523433 4:+69337132 MsG0480022179.01.T01:CDS
GGCCATCATCATAGCAGGAA+TGG 0.527722 4:+69333460 MsG0480022179.01.T01:CDS
AGAGTTAAAATCCAAATGAT+GGG 0.528348 4:+69336722 MsG0480022179.01.T01:CDS
TTCTTTCAAGAGAATTCTTG+TGG 0.530678 4:+69336468 MsG0480022179.01.T01:CDS
TAGGCAGCATTTGTGGTTGG+TGG 0.531743 4:-69336440 None:intergenic
AGCAAACAGCAAGAATGGCT+TGG 0.533200 4:-69336649 None:intergenic
CATGGTATTTCTGGGGCTGT+TGG 0.533358 4:+69336941 MsG0480022179.01.T01:CDS
GGCACATCAAAAGCCGTCGC+CGG 0.533734 4:-69333972 None:intergenic
TTCAAGGCCATCATCATAGC+AGG 0.537123 4:+69333455 MsG0480022179.01.T01:CDS
TGACTTGACGGATTTCTTGG+TGG 0.538931 4:-69333559 None:intergenic
GCACTCCTAGGAACCGCCTT+CGG 0.541368 4:+69333614 MsG0480022179.01.T01:CDS
TGATGATGCCAGAAACTGCC+AGG 0.550572 4:+69334072 MsG0480022179.01.T01:CDS
CTAGGAGTGCGACGGAGACA+AGG 0.555040 4:-69333601 None:intergenic
CAATAATAAGTCAATGCAGC+TGG 0.561487 4:-69334044 None:intergenic
TTCTTCCAAAGATCTTCCCA+TGG 0.566058 4:-69337125 None:intergenic
CGAGGCGTCCGAATAGGAGT+TGG 0.566689 4:-69333637 None:intergenic
GGGTAGGCAGCATTTGTGGT+TGG 0.568959 4:-69336443 None:intergenic
TTTGCTAATAAAAGGACAAG+AGG 0.571218 4:+69333849 MsG0480022179.01.T01:CDS
GGAGAAAATCATGATAACAA+AGG 0.571581 4:+69336809 MsG0480022179.01.T01:CDS
AGAATTCTCTTGAAAGAAGA+GGG 0.572284 4:-69336463 None:intergenic
AAAGGCCGACGCCACGTCTA+CGG 0.572932 4:+69333668 MsG0480022179.01.T01:CDS
CCTCACTTATCATACTTGGA+GGG 0.573294 4:+69337056 MsG0480022179.01.T01:CDS
CAACTCCTATTCGGACGCCT+CGG 0.577300 4:+69333638 MsG0480022179.01.T01:CDS
AAGGAGGAAGGATATCCTAA+GGG 0.582496 4:+69337019 MsG0480022179.01.T01:CDS
GGTGAAGAAGTAGCCGGGAA+TGG 0.582583 4:-69336675 None:intergenic
CAAAATCAGAAAATGGCAAG+AGG 0.585475 4:+69333383 None:intergenic
TCCGAATAGGAGTTGGCCGA+AGG 0.586471 4:-69333630 None:intergenic
TAGACGGTGAAGAAGTAGCC+GGG 0.588557 4:-69336680 None:intergenic
AGAGAATTCTTGTGGCGACA+TGG 0.588933 4:+69336476 MsG0480022179.01.T01:CDS
TATTACTCTCATTGGACCAA+AGG 0.589189 4:+69336788 MsG0480022179.01.T01:CDS
ACACTCATCACAAAGATGCT+AGG 0.592024 4:+69333518 MsG0480022179.01.T01:CDS
TAGTGCAACTGTTACTATGG+TGG 0.593095 4:+69333920 MsG0480022179.01.T01:CDS
TTGGGCATCACATAAAGAGA+AGG 0.594444 4:+69337000 MsG0480022179.01.T01:CDS
GTAGACGGTGAAGAAGTAGC+CGG 0.596248 4:-69336681 None:intergenic
CTCACTTATCATACTTGGAG+GGG 0.600686 4:+69337057 MsG0480022179.01.T01:CDS
TTCTCTTGAAAGAAGAGGGT+AGG 0.600721 4:-69336459 None:intergenic
TCACATAAAGAGAAGGAGGA+AGG 0.604798 4:+69337007 MsG0480022179.01.T01:CDS
AGGTTCAGGTCAACATGTCA+TGG 0.614954 4:+69336923 MsG0480022179.01.T01:CDS
CATGCAACGTCAGCCTCCGG+CGG 0.616211 4:-69333993 None:intergenic
AAGAGGTTCTTTCATAGCTG+CGG 0.616245 4:+69333866 MsG0480022179.01.T01:CDS
TGATGAGTGTGATGGAGAAG+AGG 0.617684 4:-69333505 None:intergenic
CATCTTTGTGATGAGTGTGA+TGG 0.618124 4:-69333513 None:intergenic
AACATGTCATGGTATTTCTG+GGG 0.624270 4:+69336934 MsG0480022179.01.T01:CDS
GAATAGGAGTTGGCCGAAGG+CGG 0.628666 4:-69333627 None:intergenic
GGCATCACATAAAGAGAAGG+AGG 0.629025 4:+69337003 MsG0480022179.01.T01:CDS
GGCGGTTCCTAGGAGTGCGA+CGG 0.633327 4:-69333609 None:intergenic
TAGGAGTGCGACGGAGACAA+GGG 0.636930 4:-69333600 None:intergenic
CGATACCGTAGACGTGGCGT+CGG 0.639282 4:-69333673 None:intergenic
CAAGGGCTGAGACCACGACT+GGG 0.639760 4:-69333583 None:intergenic
AGGAGGAAGGATATCCTAAG+GGG 0.642903 4:+69337020 MsG0480022179.01.T01:CDS
TGAAGAAGATGTGTACCAAG+AGG 0.649402 4:+69336607 MsG0480022179.01.T01:CDS
CCGTCAAGTCAACCCAGTCG+TGG 0.651286 4:+69333571 MsG0480022179.01.T01:CDS
GTTGCAAGCTGCAAAAGACA+TGG 0.660760 4:+69336367 MsG0480022179.01.T01:CDS
TTCAGCTGGGACAATAAAGG+TGG 0.666270 4:-69336888 None:intergenic
TAGCTGGAAAGAGTTCAGCT+GGG 0.667181 4:-69336901 None:intergenic
CCCTCCAAGTATGATAAGTG+AGG 0.670122 4:-69337056 None:intergenic
TACGCGATCGATGAAGTAGA+CGG 0.672938 4:-69336696 None:intergenic
GTTTGCTTGGTATTTCGCAG+CGG 0.690623 4:+69333942 MsG0480022179.01.T01:CDS
CGGAGGCTGACGTTGCATGG+AGG 0.694489 4:+69333997 MsG0480022179.01.T01:CDS
ATAAGGCGATACCGTAGACG+TGG 0.708896 4:-69333679 None:intergenic
GTCTACTTCATCGATCGCGT+AGG 0.713972 4:+69336698 MsG0480022179.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAATTAAATATAAAAAA+TGG + Chr4:69334310-69334329 MsG0480022179.01.T01:intron 0.0%
!!! TTAAATTTTAAAATTTTATA+AGG - Chr4:69334637-69334656 None:intergenic 0.0%
!! ATAAAATTAAAATTCAACTA+GGG - Chr4:69335515-69335534 None:intergenic 10.0%
!! TATAAAATTAAAATTCAACT+AGG - Chr4:69335516-69335535 None:intergenic 10.0%
!! TTAAAATCAAATGAAAATAA+TGG + Chr4:69335425-69335444 MsG0480022179.01.T01:intron 10.0%
!! AATAATTAGTATAGAAAATG+CGG + Chr4:69335779-69335798 MsG0480022179.01.T01:intron 15.0%
!! CTAAAACATTGTTAATTAAA+TGG - Chr4:69335586-69335605 None:intergenic 15.0%
!! GTGTATGTATAAAAAAAATT+AGG + Chr4:69334355-69334374 MsG0480022179.01.T01:intron 15.0%
!!! AAAATGCATTATTTAAAACA+AGG - Chr4:69335297-69335316 None:intergenic 15.0%
!!! AAATGCATTATTTAAAACAA+GGG - Chr4:69335296-69335315 None:intergenic 15.0%
!!! ACATATTAAATACTTTTCAT+TGG + Chr4:69335119-69335138 MsG0480022179.01.T01:intron 15.0%
!!! ATTAATTTAATTTAAAGGTG+TGG + Chr4:69335805-69335824 MsG0480022179.01.T01:intron 15.0%
!!! TATAAATTTCAAAAGTACAA+TGG - Chr4:69334282-69334301 None:intergenic 15.0%
!!! TTTAATAAAAGTACCTATTA+AGG - Chr4:69335182-69335201 None:intergenic 15.0%
!!! TTTTATATATGTAAGATAGT+GGG + Chr4:69335096-69335115 MsG0480022179.01.T01:intron 15.0%
!!! TTTTTATATATGTAAGATAG+TGG + Chr4:69335095-69335114 MsG0480022179.01.T01:intron 15.0%
!! AATAACATTATCTTGTTACT+AGG + Chr4:69335876-69335895 MsG0480022179.01.T01:intron 20.0%
!! AGTAAATAAATGAACAACAA+TGG - Chr4:69334241-69334260 None:intergenic 20.0%
!! ATAAAATTCTTCACTTTAGT+CGG + Chr4:69334669-69334688 MsG0480022179.01.T01:intron 20.0%
!! ATAACATTATCTTGTTACTA+GGG + Chr4:69335877-69335896 MsG0480022179.01.T01:intron 20.0%
!! ATGGTATTAATTAAATGTAC+TGG + Chr4:69335444-69335463 MsG0480022179.01.T01:intron 20.0%
!! GTTTAAGGGAAAAAAATATT+GGG - Chr4:69335917-69335936 None:intergenic 20.0%
!! TGTTTAAGGGAAAAAAATAT+TGG - Chr4:69335918-69335937 None:intergenic 20.0%
!! TTTAAGGGAAAAAAATATTG+GGG - Chr4:69335916-69335935 None:intergenic 20.0%
!!! AATTGAAGTACTATTATGTT+CGG - Chr4:69336233-69336252 None:intergenic 20.0%
!!! ACATTTATACTTTTTAAACG+TGG - Chr4:69334956-69334975 None:intergenic 20.0%
!!! CATTTATACTTTTTAAACGT+GGG - Chr4:69334955-69334974 None:intergenic 20.0%
!!! GCATTTTCTATACTAATTAT+TGG - Chr4:69335780-69335799 None:intergenic 20.0%
!!! GGCTGATTAATTTAATTTAA+AGG + Chr4:69335800-69335819 MsG0480022179.01.T01:intron 20.0%
!!! TCAAAACCTTATCTAAAATT+TGG + Chr4:69336197-69336216 MsG0480022179.01.T01:intron 20.0%
!!! TGTTCATTTATTTACTTTTG+TGG + Chr4:69334245-69334264 MsG0480022179.01.T01:intron 20.0%
!!! TTCAGTTGATCATTTATTTT+TGG + Chr4:69336127-69336146 MsG0480022179.01.T01:intron 20.0%
! AAAATATACTGATGTCTTCA+TGG - Chr4:69334731-69334750 None:intergenic 25.0%
! AAAGAAGGAATAGAATAGAA+AGG + Chr4:69335608-69335627 MsG0480022179.01.T01:intron 25.0%
! AAATAAGAAAGTCATAGGTA+CGG - Chr4:69335373-69335392 None:intergenic 25.0%
! AAATGGTTAAACTTACTTGA+AGG - Chr4:69335569-69335588 None:intergenic 25.0%
! AACAATTGAATAACGTACTA+TGG + Chr4:69336305-69336324 MsG0480022179.01.T01:intron 25.0%
! AAGAGTTAAAATCCAAATGA+TGG + Chr4:69336721-69336740 MsG0480022179.01.T01:CDS 25.0%
! AAGTAATAATGTGTACTACT+TGG + Chr4:69335040-69335059 MsG0480022179.01.T01:intron 25.0%
! AAGTATAAATGTGTACTACT+TGG + Chr4:69334964-69334983 MsG0480022179.01.T01:intron 25.0%
! AATTATTGGCATTCTCTTAT+TGG - Chr4:69335766-69335785 None:intergenic 25.0%
! AGAGTTAAAATCCAAATGAT+GGG + Chr4:69336722-69336741 MsG0480022179.01.T01:CDS 25.0%
! ATAAATATGTGAAGTAGAGA+GGG - Chr4:69334109-69334128 None:intergenic 25.0%
! ATCGTTTGTATATTTCACTT+TGG - Chr4:69336571-69336590 None:intergenic 25.0%
! ATTATACTTCTTTATGCAAG+TGG - Chr4:69334992-69335011 None:intergenic 25.0%
! CACTTATTATCGAAATGAAT+TGG - Chr4:69336068-69336087 None:intergenic 25.0%
! CCTTAATACAAGTTTGAATT+CGG - Chr4:69335986-69336005 None:intergenic 25.0%
! GAAGTATAATGTGTACTATT+TGG + Chr4:69335002-69335021 MsG0480022179.01.T01:intron 25.0%
! GAATAAAAAAAGTGAACACT+AGG - Chr4:69334384-69334403 None:intergenic 25.0%
! GAGAAAATCATGATAACAAA+GGG + Chr4:69336810-69336829 MsG0480022179.01.T01:CDS 25.0%
! GATTGTTAGCATCAATAATA+AGG - Chr4:69333699-69333718 None:intergenic 25.0%
! GTTTCTTTAGATTCTTCTTA+GGG + Chr4:69333778-69333797 MsG0480022179.01.T01:intron 25.0%
! TAAATTAACATCGACAAAGT+TGG - Chr4:69336097-69336116 None:intergenic 25.0%
! TATAAATATGTGAAGTAGAG+AGG - Chr4:69334110-69334129 None:intergenic 25.0%
! TATTACTTCTTTATGCAAGT+GGG - Chr4:69335028-69335047 None:intergenic 25.0%
! TTATACTTCTTTATGCAAGT+GGG - Chr4:69334991-69335010 None:intergenic 25.0%
! TTATTACTTCTTTATGCAAG+TGG - Chr4:69335029-69335048 None:intergenic 25.0%
!! CATTGCATTTTTAATGTTCA+TGG + Chr4:69336274-69336293 MsG0480022179.01.T01:intron 25.0%
!! GTATTTACCACTTTGTTTAA+GGG - Chr4:69335931-69335950 None:intergenic 25.0%
!! TACCTATGACTTTCTTATTT+GGG + Chr4:69335373-69335392 MsG0480022179.01.T01:intron 25.0%
!! TCTATTACTCATTTTACAAG+TGG - Chr4:69335067-69335086 None:intergenic 25.0%
!!! AACAATGTTTTAGTCAAAGA+AGG + Chr4:69335593-69335612 MsG0480022179.01.T01:intron 25.0%
!!! AGTTGATCATTTATTTTTGG+TGG + Chr4:69336130-69336149 MsG0480022179.01.T01:intron 25.0%
!!! ATGTATGTGTGAGTTTTAAA+CGG - Chr4:69335953-69335972 None:intergenic 25.0%
!!! TTTTTTTCCCTTAAACAAAG+TGG + Chr4:69335921-69335940 MsG0480022179.01.T01:intron 25.0%
AACACAATACTACCATTTCA+AGG + Chr4:69333439-69333458 MsG0480022179.01.T01:CDS 30.0%
AACCCAAATATCTTGTTAAC+GGG + Chr4:69334447-69334466 MsG0480022179.01.T01:intron 30.0%
AAGAATTCTCTTGAAAGAAG+AGG - Chr4:69336467-69336486 None:intergenic 30.0%
ACAATAGTAGTTCCTTAACA+AGG - Chr4:69335250-69335269 None:intergenic 30.0%
ACTGCACATTAAAAGTAGTT+AGG + Chr4:69334548-69334567 MsG0480022179.01.T01:intron 30.0%
AGAATTCTCTTGAAAGAAGA+GGG - Chr4:69336466-69336485 None:intergenic 30.0%
ATATATATCGAGTGATCGAT+TGG + Chr4:69335701-69335720 MsG0480022179.01.T01:intron 30.0%
ATTAGCAAACTCAGACATAA+TGG - Chr4:69333838-69333857 None:intergenic 30.0%
CAAGAAATGTCCATTTCAAA+TGG - Chr4:69335400-69335419 None:intergenic 30.0%
CATTTAAGAAGTCCTTGTTA+AGG + Chr4:69335235-69335254 MsG0480022179.01.T01:intron 30.0%
CCGAATTCAAACTTGTATTA+AGG + Chr4:69335983-69336002 MsG0480022179.01.T01:intron 30.0%
CTTAACAAGGACTTCTTAAA+TGG - Chr4:69335237-69335256 None:intergenic 30.0%
GAACCCAAATATCTTGTTAA+CGG + Chr4:69334446-69334465 MsG0480022179.01.T01:intron 30.0%
GACATAATGGTAGAAGATAA+AGG - Chr4:69333825-69333844 None:intergenic 30.0%
GGAGAAAATCATGATAACAA+AGG + Chr4:69336809-69336828 MsG0480022179.01.T01:CDS 30.0%
GGTTTCTTTAGATTCTTCTT+AGG + Chr4:69333777-69333796 MsG0480022179.01.T01:intron 30.0%
GTACCTATGACTTTCTTATT+TGG + Chr4:69335372-69335391 MsG0480022179.01.T01:intron 30.0%
TAAATATGTGAAGTAGAGAG+GGG - Chr4:69334108-69334127 None:intergenic 30.0%
TACCCGTTAACAAGATATTT+GGG - Chr4:69334452-69334471 None:intergenic 30.0%
TCATTTCGATAATAAGTGTG+AGG + Chr4:69336070-69336089 MsG0480022179.01.T01:intron 30.0%
TGAAGAAAAAACCCATCATT+TGG - Chr4:69336736-69336755 None:intergenic 30.0%
TTATTTGGGTCCATTTGAAA+TGG + Chr4:69335387-69335406 MsG0480022179.01.T01:intron 30.0%
TTCTTTCAAGAGAATTCTTG+TGG + Chr4:69336468-69336487 MsG0480022179.01.T01:CDS 30.0%
TTGTTAAGGAACTACTATTG+TGG + Chr4:69335249-69335268 MsG0480022179.01.T01:intron 30.0%
TTTGCTAATAAAAGGACAAG+AGG + Chr4:69333849-69333868 MsG0480022179.01.T01:CDS 30.0%
! AAGATCTTTGGAAGAAAATG+AGG + Chr4:69337132-69337151 MsG0480022179.01.T01:CDS 30.0%
! CATTTGAAATGGACATTTCT+TGG + Chr4:69335398-69335417 MsG0480022179.01.T01:intron 30.0%
! GCTTTCTTCTTTGCAAATTT+TGG + Chr4:69336854-69336873 MsG0480022179.01.T01:CDS 30.0%
! GGTATTTACCACTTTGTTTA+AGG - Chr4:69335932-69335951 None:intergenic 30.0%
! GTGGAACCAAATTTTAGATA+AGG - Chr4:69336206-69336225 None:intergenic 30.0%
! GTTATCATGATTTTCTCCTT+TGG - Chr4:69336807-69336826 None:intergenic 30.0%
!! CGAAGTGTCTATAAAACTTT+TGG + Chr4:69334698-69334717 MsG0480022179.01.T01:intron 30.0%
!! TGTCTGAGTTTGCTAATAAA+AGG + Chr4:69333841-69333860 MsG0480022179.01.T01:CDS 30.0%
!! TTTCACTTTGGAATAGAACT+TGG - Chr4:69336559-69336578 None:intergenic 30.0%
!!! AATGATGGGTTTTTTCTTCA+TGG + Chr4:69336736-69336755 MsG0480022179.01.T01:CDS 30.0%
!!! CAGTGTCATTTTTTGCTTTA+GGG + Chr4:69336759-69336778 MsG0480022179.01.T01:CDS 30.0%
!!! TGTTACTTACTTTTTCACCA+AGG + Chr4:69337099-69337118 MsG0480022179.01.T01:CDS 30.0%
AAAGCCTCACTTATCATACT+TGG + Chr4:69337052-69337071 MsG0480022179.01.T01:CDS 35.0%
AAAGGGTTCATGGTTATCTA+TGG + Chr4:69336827-69336846 MsG0480022179.01.T01:CDS 35.0%
AAATAAGTGATGTGTCACGT+GGG + Chr4:69335209-69335228 MsG0480022179.01.T01:intron 35.0%
ACATTATCTTGTTACTAGGG+AGG + Chr4:69335880-69335899 MsG0480022179.01.T01:intron 35.0%
ATATAGTGTCCGTTCCTTAA+CGG - Chr4:69334900-69334919 None:intergenic 35.0%
ATGGATTCTCTTCGGTTATT+TGG - Chr4:69336418-69336437 None:intergenic 35.0%
ATTAAATTCCTTGCGTCATG+TGG + Chr4:69335662-69335681 MsG0480022179.01.T01:intron 35.0%
CAACATGTCATGGTATTTCT+GGG + Chr4:69336933-69336952 MsG0480022179.01.T01:CDS 35.0%
CAATAATAAGTCAATGCAGC+TGG - Chr4:69334047-69334066 None:intergenic 35.0%
CACGAAAAAATGCATGATGA+AGG - Chr4:69336163-69336182 None:intergenic 35.0%
CATTAGGTATACAGCATTAG+TGG + Chr4:69336334-69336353 MsG0480022179.01.T01:intron 35.0%
CCAATGGCAATACACTAATA+AGG - Chr4:69335148-69335167 None:intergenic 35.0%
CCTTATTAGTGTATTGCCAT+TGG + Chr4:69335145-69335164 MsG0480022179.01.T01:intron 35.0%
GACCCAAATAAGAAAGTCAT+AGG - Chr4:69335378-69335397 None:intergenic 35.0%
GTACCCGTTAACAAGATATT+TGG - Chr4:69334453-69334472 None:intergenic 35.0%
TAAATAAGTGATGTGTCACG+TGG + Chr4:69335208-69335227 MsG0480022179.01.T01:intron 35.0%
TAAGGAACGGACACTATATA+AGG + Chr4:69334901-69334920 MsG0480022179.01.T01:intron 35.0%
TACTATTATGTTCGGCTAAG+TGG - Chr4:69336225-69336244 None:intergenic 35.0%
TATTACTCTCATTGGACCAA+AGG + Chr4:69336788-69336807 MsG0480022179.01.T01:CDS 35.0%
TCAACATGTCATGGTATTTC+TGG + Chr4:69336932-69336951 MsG0480022179.01.T01:CDS 35.0%
TCATGATAACAAAGGGTTCA+TGG + Chr4:69336817-69336836 MsG0480022179.01.T01:CDS 35.0%
TCGACATTATCAGTTGTGTT+AGG + Chr4:69336023-69336042 MsG0480022179.01.T01:intron 35.0%
TGGATCTGTTGGATTTCTTT+GGG + Chr4:69336982-69337001 MsG0480022179.01.T01:CDS 35.0%
TTGGATCTGTTGGATTTCTT+TGG + Chr4:69336981-69337000 MsG0480022179.01.T01:CDS 35.0%
TTGGTCCAATGAGAGTAATA+GGG - Chr4:69336788-69336807 None:intergenic 35.0%
TTTAGATTCTTCTTAGGGCT+TGG + Chr4:69333783-69333802 MsG0480022179.01.T01:intron 35.0%
TTTGGTCCAATGAGAGTAAT+AGG - Chr4:69336789-69336808 None:intergenic 35.0%
! AACATGTCATGGTATTTCTG+GGG + Chr4:69336934-69336953 MsG0480022179.01.T01:CDS 35.0%
! AAGATATTTGGGTTCGATAG+TGG - Chr4:69334441-69334460 None:intergenic 35.0%
! AATTTAAAGGTGTGGAAGTG+AGG + Chr4:69335813-69335832 MsG0480022179.01.T01:intron 35.0%
! ACAATAAAGGTGGTAGTGTT+AGG - Chr4:69336881-69336900 None:intergenic 35.0%
! AGCTCTCTTTGTTGTACATA+TGG - Chr4:69333739-69333758 None:intergenic 35.0%
! CTCAATTTTTCTTCCTCCAA+TGG - Chr4:69334874-69334893 None:intergenic 35.0%
! GCTTGTGTTTTACTATCTCT+TGG + Chr4:69333756-69333775 MsG0480022179.01.T01:intron 35.0%
! TATGCAAGGGTTTGGTATAT+TGG + Chr4:69333896-69333915 MsG0480022179.01.T01:CDS 35.0%
! TTTTCGCATGTTCTGCTAAT+TGG + Chr4:69336507-69336526 MsG0480022179.01.T01:CDS 35.0%
! TTTTTCACCAAGGAAACCAT+GGG + Chr4:69337109-69337128 MsG0480022179.01.T01:CDS 35.0%
!! ATTGTGTTTTTGCTGAGTCA+AGG - Chr4:69333427-69333446 None:intergenic 35.0%
!! CAGCTGCATTGACTTATTAT+TGG + Chr4:69334045-69334064 MsG0480022179.01.T01:CDS 35.0%
!! CGATAGTGGAAAACAAATGT+AGG - Chr4:69334427-69334446 None:intergenic 35.0%
!! CTTCTTCATCTTTTTCGTTG+AGG - Chr4:69336595-69336614 None:intergenic 35.0%
!! TGGAGGTTGATATTGATGAT+TGG + Chr4:69334014-69334033 MsG0480022179.01.T01:CDS 35.0%
!! TTGTGTTTTTGCTGAGTCAA+GGG - Chr4:69333426-69333445 None:intergenic 35.0%
!!! GCAGTGTCATTTTTTGCTTT+AGG + Chr4:69336758-69336777 MsG0480022179.01.T01:CDS 35.0%
!!! GTTTTTTCTATGCAAGGGTT+TGG + Chr4:69333888-69333907 MsG0480022179.01.T01:CDS 35.0%
AACTTAAACCACATGACGCA+AGG - Chr4:69335673-69335692 None:intergenic 40.0%
AAGAGGTTCTTTCATAGCTG+CGG + Chr4:69333866-69333885 MsG0480022179.01.T01:CDS 40.0%
AAGGAGGAAGGATATCCTAA+GGG + Chr4:69337019-69337038 MsG0480022179.01.T01:CDS 40.0%
AATAAGTGATGTGTCACGTG+GGG + Chr4:69335210-69335229 MsG0480022179.01.T01:intron 40.0%
ACACTCATCACAAAGATGCT+AGG + Chr4:69333518-69333537 MsG0480022179.01.T01:CDS 40.0%
CATCGATCAGTCAATGTCTT+GGG + Chr4:69335543-69335562 MsG0480022179.01.T01:intron 40.0%
CATCTTTGTGATGAGTGTGA+TGG - Chr4:69333516-69333535 None:intergenic 40.0%
CCTCACTTATCATACTTGGA+GGG + Chr4:69337056-69337075 MsG0480022179.01.T01:CDS 40.0%
CTCACTTATCATACTTGGAG+GGG + Chr4:69337057-69337076 MsG0480022179.01.T01:CDS 40.0%
CTGGCAAAAGATGAGAAAAC+TGG + Chr4:69335463-69335482 MsG0480022179.01.T01:intron 40.0%
GAAAAATTGAGTCCCCGTTA+AGG + Chr4:69334883-69334902 MsG0480022179.01.T01:intron 40.0%
GGAGTCATTGAGTCCTTAAT+AGG + Chr4:69335166-69335185 MsG0480022179.01.T01:intron 40.0%
GGTTTCCCTATTACTCTCAT+TGG + Chr4:69336780-69336799 MsG0480022179.01.T01:CDS 40.0%
TAAGGACTCAATGACTCCAA+TGG - Chr4:69335164-69335183 None:intergenic 40.0%
TAGTGCAACTGTTACTATGG+TGG + Chr4:69333920-69333939 MsG0480022179.01.T01:CDS 40.0%
TATAGTGTCCGTTCCTTAAC+GGG - Chr4:69334899-69334918 None:intergenic 40.0%
TCACATAAAGAGAAGGAGGA+AGG + Chr4:69337007-69337026 MsG0480022179.01.T01:CDS 40.0%
TCATCGATCAGTCAATGTCT+TGG + Chr4:69335542-69335561 MsG0480022179.01.T01:intron 40.0%
TCTCTCTCCTGAGTAACTAA+CGG + Chr4:69334928-69334947 MsG0480022179.01.T01:intron 40.0%
TGAAGAAGATGTGTACCAAG+AGG + Chr4:69336607-69336626 MsG0480022179.01.T01:CDS 40.0%
TTCTCTTGAAAGAAGAGGGT+AGG - Chr4:69336462-69336481 None:intergenic 40.0%
TTCTTCCAAAGATCTTCCCA+TGG - Chr4:69337128-69337147 None:intergenic 40.0%
TTCTTCTTAGGGCTTGGAAT+TGG + Chr4:69333789-69333808 MsG0480022179.01.T01:intron 40.0%
TTGGGCATCACATAAAGAGA+AGG + Chr4:69337000-69337019 MsG0480022179.01.T01:CDS 40.0%
! TGCTAACAATCTCTAGCTTC+TGG + Chr4:69333708-69333727 MsG0480022179.01.T01:intron 40.0%
!! ATGACTAAGAGCATCTCCAA+TGG + Chr4:69334811-69334830 MsG0480022179.01.T01:intron 40.0%
!! CTATGATGATGGCCTTGAAA+TGG - Chr4:69333454-69333473 None:intergenic 40.0%
!! CTTTTTCACCAAGGAAACCA+TGG + Chr4:69337108-69337127 MsG0480022179.01.T01:CDS 40.0%
!! TGACTAAGAGCATCTCCAAT+GGG + Chr4:69334812-69334831 MsG0480022179.01.T01:intron 40.0%
!! TGGTGGTAATGGATTCTCTT+CGG - Chr4:69336426-69336445 None:intergenic 40.0%
!! TGTTACTATGGTGGTTTGCT+TGG + Chr4:69333929-69333948 MsG0480022179.01.T01:CDS 40.0%
!!! CTGCGGTTTTTTCTATGCAA+GGG + Chr4:69333883-69333902 MsG0480022179.01.T01:CDS 40.0%
AACTCTTTCCAGCTAGGTTC+AGG + Chr4:69336909-69336928 MsG0480022179.01.T01:CDS 45.0%
AATGGGGGTCCTACTTAACA+AGG + Chr4:69334829-69334848 MsG0480022179.01.T01:intron 45.0%
ACAAAGCAAATCCACGTGGA+TGG - Chr4:69335636-69335655 None:intergenic 45.0%
AGAAACTACCTGGCAGTTTC+TGG - Chr4:69334083-69334102 None:intergenic 45.0%
AGAGAATTCTTGTGGCGACA+TGG + Chr4:69336476-69336495 MsG0480022179.01.T01:CDS 45.0%
AGATCTTCCCATGGTTTCCT+TGG - Chr4:69337119-69337138 None:intergenic 45.0%
AGCAAACAGCAAGAATGGCT+TGG - Chr4:69336652-69336671 None:intergenic 45.0%
AGGAGGAAGGATATCCTAAG+GGG + Chr4:69337020-69337039 MsG0480022179.01.T01:CDS 45.0%
AGGTTCAGGTCAACATGTCA+TGG + Chr4:69336923-69336942 MsG0480022179.01.T01:CDS 45.0%
ATAGAAAGGAACCATCCACG+TGG + Chr4:69335622-69335641 MsG0480022179.01.T01:intron 45.0%
ATAGTGTCCGTTCCTTAACG+GGG - Chr4:69334898-69334917 None:intergenic 45.0%
ATTGAGTCCCCGTTAAGGAA+CGG + Chr4:69334888-69334907 MsG0480022179.01.T01:intron 45.0%
CCCTCCAAGTATGATAAGTG+AGG - Chr4:69337059-69337078 None:intergenic 45.0%
CGTACTATGGTGTGTGCATT+AGG + Chr4:69336318-69336337 MsG0480022179.01.T01:intron 45.0%
CTCTCTCCTGAGTAACTAAC+GGG + Chr4:69334929-69334948 MsG0480022179.01.T01:intron 45.0%
GAAGGAGGAAGGATATCCTA+AGG + Chr4:69337018-69337037 MsG0480022179.01.T01:CDS 45.0%
GAAGGATATCCTAAGGGGAT+TGG + Chr4:69337025-69337044 MsG0480022179.01.T01:CDS 45.0%
GAGTTCAGCTGGGACAATAA+AGG - Chr4:69336894-69336913 None:intergenic 45.0%
GCAAACAAAGCAAATCCACG+TGG - Chr4:69335640-69335659 None:intergenic 45.0%
GCCATCATCATAGCAGGAAT+GGG + Chr4:69333461-69333480 MsG0480022179.01.T01:CDS 45.0%
GCCTCACTTATCATACTTGG+AGG + Chr4:69337055-69337074 MsG0480022179.01.T01:CDS 45.0%
GCTTTCATTCCAATCCCCTT+AGG - Chr4:69337037-69337056 None:intergenic 45.0%
GGAAACCATGGGAAGATCTT+TGG + Chr4:69337120-69337139 MsG0480022179.01.T01:CDS 45.0%
GGCATCACATAAAGAGAAGG+AGG + Chr4:69337003-69337022 MsG0480022179.01.T01:CDS 45.0%
GGCTAGTGCAACTGTTACTA+TGG + Chr4:69333917-69333936 MsG0480022179.01.T01:CDS 45.0%
GGTAGAGCAAACAGCAAGAA+TGG - Chr4:69336657-69336676 None:intergenic 45.0%
GGTGCAATCATTGGATCTGT+TGG + Chr4:69336971-69336990 MsG0480022179.01.T01:CDS 45.0%
GTTGCAAGCTGCAAAAGACA+TGG + Chr4:69336367-69336386 MsG0480022179.01.T01:CDS 45.0%
GTTTGCTTGGTATTTCGCAG+CGG + Chr4:69333942-69333961 MsG0480022179.01.T01:CDS 45.0%
TACGCGATCGATGAAGTAGA+CGG - Chr4:69336699-69336718 None:intergenic 45.0%
TAGCTGGAAAGAGTTCAGCT+GGG - Chr4:69336904-69336923 None:intergenic 45.0%
TCCCATTCCTGCTATGATGA+TGG - Chr4:69333465-69333484 None:intergenic 45.0%
TCCTCCAATGGAGTCCTTAA+CGG - Chr4:69334862-69334881 None:intergenic 45.0%
TTCAAGGCCATCATCATAGC+AGG + Chr4:69333455-69333474 MsG0480022179.01.T01:CDS 45.0%
TTCAGCTGGGACAATAAAGG+TGG - Chr4:69336891-69336910 None:intergenic 45.0%
TTCTTAGGGCTTGGAATTGG+TGG + Chr4:69333792-69333811 MsG0480022179.01.T01:intron 45.0%
TTGCAAGATGGAAAGCCTCT+TGG - Chr4:69336625-69336644 None:intergenic 45.0%
TTGTTAAGTAGGACCCCCAT+TGG - Chr4:69334830-69334849 None:intergenic 45.0%
! TGATGAGTGTGATGGAGAAG+AGG - Chr4:69333508-69333527 None:intergenic 45.0%
! TGGCTTGGATTCTTGCAAGA+TGG - Chr4:69336637-69336656 None:intergenic 45.0%
!! ACTAAGAGCATCTCCAATGG+GGG + Chr4:69334814-69334833 MsG0480022179.01.T01:intron 45.0%
!! GACTAAGAGCATCTCCAATG+GGG + Chr4:69334813-69334832 MsG0480022179.01.T01:intron 45.0%
!! GCATTTGTGGTTGGTGGTAA+TGG - Chr4:69336437-69336456 None:intergenic 45.0%
!! GGTAAGGTTGGTGCAATCAT+TGG + Chr4:69336962-69336981 MsG0480022179.01.T01:CDS 45.0%
!! GGTTGACTTGACGGATTTCT+TGG - Chr4:69333565-69333584 None:intergenic 45.0%
!! TATTTCTGGGGCTGTTGGTA+AGG + Chr4:69336946-69336965 MsG0480022179.01.T01:CDS 45.0%
!! TGACTTGACGGATTTCTTGG+TGG - Chr4:69333562-69333581 None:intergenic 45.0%
!! TTGACGGATTTCTTGGTGGT+CGG - Chr4:69333558-69333577 None:intergenic 45.0%
!!! GCTGCGGTTTTTTCTATGCA+AGG + Chr4:69333882-69333901 MsG0480022179.01.T01:CDS 45.0%
AAGAGGGTAGGCAGCATTTG+TGG - Chr4:69336450-69336469 None:intergenic 50.0%
ATAAGGCGATACCGTAGACG+TGG - Chr4:69333682-69333701 None:intergenic 50.0%
CAGCTGAACTCTTTCCAGCT+AGG + Chr4:69336903-69336922 MsG0480022179.01.T01:CDS 50.0%
CATGTTGACCTGAACCTAGC+TGG - Chr4:69336920-69336939 None:intergenic 50.0%
CCTCCAATGGAGTCCTTAAC+GGG - Chr4:69334861-69334880 None:intergenic 50.0%
CTAGCTGGAAAGAGTTCAGC+TGG - Chr4:69336905-69336924 None:intergenic 50.0%
CTCCAATGGAGTCCTTAACG+GGG - Chr4:69334860-69334879 None:intergenic 50.0%
GCTGTTTGCTCTACCATTCC+CGG + Chr4:69336662-69336681 MsG0480022179.01.T01:CDS 50.0%
GGCCATCATCATAGCAGGAA+TGG + Chr4:69333460-69333479 MsG0480022179.01.T01:CDS 50.0%
GTAGACGGTGAAGAAGTAGC+CGG - Chr4:69336684-69336703 None:intergenic 50.0%
GTCTACTTCATCGATCGCGT+AGG + Chr4:69336698-69336717 MsG0480022179.01.T01:CDS 50.0%
TAGACGGTGAAGAAGTAGCC+GGG - Chr4:69336683-69336702 None:intergenic 50.0%
TAGGCAGCATTTGTGGTTGG+TGG - Chr4:69336443-69336462 None:intergenic 50.0%
TCCAATGGAGTCCTTAACGG+GGG - Chr4:69334859-69334878 None:intergenic 50.0%
! TGATGATGCCAGAAACTGCC+AGG + Chr4:69334072-69334091 MsG0480022179.01.T01:CDS 50.0%
!! CATGGTATTTCTGGGGCTGT+TGG + Chr4:69336941-69336960 MsG0480022179.01.T01:CDS 50.0%
AACAAGGACCACCCCCGTTA+AGG + Chr4:69334845-69334864 MsG0480022179.01.T01:intron 55.0%
AATGGAGTCCTTAACGGGGG+TGG - Chr4:69334856-69334875 None:intergenic 55.0%
ACCCCCGTTAAGGACTCCAT+TGG + Chr4:69334855-69334874 MsG0480022179.01.T01:intron 55.0%
ATTTCGCAGCGGTTCGAAGC+CGG + Chr4:69333953-69333972 MsG0480022179.01.T01:CDS 55.0%
CAACTCCTATTCGGACGCCT+CGG + Chr4:69333638-69333657 MsG0480022179.01.T01:CDS 55.0%
CCCGTTAAGGACTCCATTGG+AGG + Chr4:69334858-69334877 MsG0480022179.01.T01:intron 55.0%
GAATAGGAGTTGGCCGAAGG+CGG - Chr4:69333630-69333649 None:intergenic 55.0%
GAGAGGGGCAAGAAACTACC+TGG - Chr4:69334093-69334112 None:intergenic 55.0%
GCCTTCGGCCAACTCCTATT+CGG + Chr4:69333629-69333648 MsG0480022179.01.T01:CDS 55.0%
GGGGGTGGTCCTTGTTAAGT+AGG - Chr4:69334841-69334860 None:intergenic 55.0%
GGGTAGGCAGCATTTGTGGT+TGG - Chr4:69336446-69336465 None:intergenic 55.0%
GGTGAAGAAGTAGCCGGGAA+TGG - Chr4:69336678-69336697 None:intergenic 55.0%
TCCGAATAGGAGTTGGCCGA+AGG - Chr4:69333633-69333652 None:intergenic 55.0%
! ACTTGGAGGGGTGTGCATAG+TGG + Chr4:69337069-69337088 MsG0480022179.01.T01:CDS 55.0%
! CTTGGAGGGGTGTGCATAGT+GGG + Chr4:69337070-69337089 MsG0480022179.01.T01:CDS 55.0%
! TAGGAGTGCGACGGAGACAA+GGG - Chr4:69333603-69333622 None:intergenic 55.0%
! TCTGGGGCTGTTGGTAAGGT+TGG + Chr4:69336950-69336969 MsG0480022179.01.T01:CDS 55.0%
!! CCACGACTGGGTTGACTTGA+CGG - Chr4:69333574-69333593 None:intergenic 55.0%
AAAGGCCGACGCCACGTCTA+CGG + Chr4:69333668-69333687 MsG0480022179.01.T01:CDS 60.0%
ACAAGGGCTGAGACCACGAC+TGG - Chr4:69333587-69333606 None:intergenic 60.0%
CAAGGGCTGAGACCACGACT+GGG - Chr4:69333586-69333605 None:intergenic 60.0%
CCGTCAAGTCAACCCAGTCG+TGG + Chr4:69333571-69333590 MsG0480022179.01.T01:CDS 60.0%
CGATACCGTAGACGTGGCGT+CGG - Chr4:69333676-69333695 None:intergenic 60.0%
CGTGGGCCCGTTAGTTACTC+AGG - Chr4:69334938-69334957 None:intergenic 60.0%
CTCCATGCAACGTCAGCCTC+CGG - Chr4:69333999-69334018 None:intergenic 60.0%
CTTGTCTCCGTCGCACTCCT+AGG + Chr4:69333602-69333621 MsG0480022179.01.T01:CDS 60.0%
GCACTCCTAGGAACCGCCTT+CGG + Chr4:69333614-69333633 MsG0480022179.01.T01:CDS 60.0%
GGACGCCTCGGAGACCTAAA+AGG + Chr4:69333650-69333669 MsG0480022179.01.T01:CDS 60.0%
GGCACATCAAAAGCCGTCGC+CGG - Chr4:69333975-69333994 None:intergenic 60.0%
GTACTGCACAGCACAGCACG+CGG - Chr4:69335348-69335367 None:intergenic 60.0%
! CGAGGCGTCCGAATAGGAGT+TGG - Chr4:69333640-69333659 None:intergenic 60.0%
! CTAGGAGTGCGACGGAGACA+AGG - Chr4:69333604-69333623 None:intergenic 60.0%
! GACGGCTTTTGATGTGCCGC+CGG + Chr4:69333977-69333996 MsG0480022179.01.T01:CDS 60.0%
!! GTCGGCCTTTTAGGTCTCCG+AGG - Chr4:69333658-69333677 None:intergenic 60.0%
!!! AGACGTGGCGTCGGCCTTTT+AGG - Chr4:69333667-69333686 None:intergenic 60.0%
CATGCAACGTCAGCCTCCGG+CGG - Chr4:69333996-69334015 None:intergenic 65.0%
CGGAGGCTGACGTTGCATGG+AGG + Chr4:69333997-69334016 MsG0480022179.01.T01:CDS 65.0%
GTTGGCCGAAGGCGGTTCCT+AGG - Chr4:69333622-69333641 None:intergenic 65.0%
! GGCGGTTCCTAGGAGTGCGA+CGG - Chr4:69333612-69333631 None:intergenic 65.0%
! GGCTTTTGATGTGCCGCCGG+AGG + Chr4:69333980-69333999 MsG0480022179.01.T01:CDS 65.0%
! GGTCTCCGAGGCGTCCGAAT+AGG - Chr4:69333646-69333665 None:intergenic 65.0%
CAGCGGTTCGAAGCCGGCGA+CGG + Chr4:69333959-69333978 MsG0480022179.01.T01:CDS 70.0%
CGCCGGAGGCTGACGTTGCA+TGG + Chr4:69333994-69334013 MsG0480022179.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 69333395 69337195 69333395 ID=MsG0480022179.01;Name=MsG0480022179.01
Chr4 mRNA 69333395 69337195 69333395 ID=MsG0480022179.01.T01;Parent=MsG0480022179.01;Name=MsG0480022179.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0|0|1|1|1|3|0|481
Chr4 exon 69333395 69333689 69333395 ID=MsG0480022179.01.T01:exon:8277;Parent=MsG0480022179.01.T01
Chr4 exon 69333799 69334093 69333799 ID=MsG0480022179.01.T01:exon:8278;Parent=MsG0480022179.01.T01
Chr4 exon 69336340 69337195 69336340 ID=MsG0480022179.01.T01:exon:8279;Parent=MsG0480022179.01.T01
Chr4 CDS 69333395 69333689 69333395 ID=MsG0480022179.01.T01:cds;Parent=MsG0480022179.01.T01
Chr4 CDS 69333799 69334093 69333799 ID=MsG0480022179.01.T01:cds;Parent=MsG0480022179.01.T01
Chr4 CDS 69336340 69337195 69336340 ID=MsG0480022179.01.T01:cds;Parent=MsG0480022179.01.T01
Gene Sequence

>MsG0480022179.01.T01

ATGGCAAGAGGATTGAAGGTTCTATCTGCCCTTGACTCAGCAAAAACACAATACTACCATTTCAAGGCCATCATCATAGCAGGAATGGGACTTTTCACAGACTCTTATGACCTCTTCTCCATCACACTCATCACAAAGATGCTAGGAAGAATATACTACTCCGACCACCAAGAAATCCGTCAAGTCAACCCAGTCGTGGTCTCAGCCCTTGTCTCCGTCGCACTCCTAGGAACCGCCTTCGGCCAACTCCTATTCGGACGCCTCGGAGACCTAAAAGGCCGACGCCACGTCTACGGGCTTGGAATTGGTGGTGATTATCCTTTATCTTCTACCATTATGTCTGAGTTTGCTAATAAAAGGACAAGAGGTTCTTTCATAGCTGCGGTTTTTTCTATGCAAGGGTTTGGTATATTGGCTAGTGCAACTGTTACTATGGTGGTTTGCTTGGTATTTCGCAGCGGTTCGAAGCCGGCGACGGCTTTTGATGTGCCGCCGGAGGCTGACGTTGCATGGAGGTTGATATTGATGATTGGTTCAGTTCCAGCTGCATTGACTTATTATTGGCGTATGATGATGCCAGAAACTGCCAGGTATACAGCATTAGTGGAACAAAATGTGTTGCAAGCTGCAAAAGACATGGAGAAAGTACTAGATGTCTCAATGAGCCAAATAACCGAAGAGAATCCATTACCACCAACCACAAATGCTGCCTACCCTCTTCTTTCAAGAGAATTCTTGTGGCGACATGGTCGCGATCTTTTCGCATGTTCTGCTAATTGGTTTCTCTTAGACATAGTATTCTACAGCCAAGTTCTATTCCAAAGTGAAATATACAAACGATACCTCAACGAAAAAGATGAAGAAGATGTGTACCAAGAGGCTTTCCATCTTGCAAGAATCCAAGCCATTCTTGCTGTTTGCTCTACCATTCCCGGCTACTTCTTCACCGTCTACTTCATCGATCGCGTAGGAAGAGTTAAAATCCAAATGATGGGTTTTTTCTTCATGGCAGTGTCATTTTTTGCTTTAGGGTTTCCCTATTACTCTCATTGGACCAAAGGAGAAAATCATGATAACAAAGGGTTCATGGTTATCTATGGTCTTGCTTTCTTCTTTGCAAATTTTGGACCTAACACTACCACCTTTATTGTCCCAGCTGAACTCTTTCCAGCTAGGTTCAGGTCAACATGTCATGGTATTTCTGGGGCTGTTGGTAAGGTTGGTGCAATCATTGGATCTGTTGGATTTCTTTGGGCATCACATAAAGAGAAGGAGGAAGGATATCCTAAGGGGATTGGAATGAAAGCCTCACTTATCATACTTGGAGGGGTGTGCATAGTGGGAATGTTTGTTACTTACTTTTTCACCAAGGAAACCATGGGAAGATCTTTGGAAGAAAATGAGGATGAGCAGTCTCATCATGCAGAAGAATATAACGATCTTTGA
Protein sequence

>MsG0480022179.01.T01

MARGLKVLSALDSAKTQYYHFKAIIIAGMGLFTDSYDLFSITLITKMLGRIYYSDHQEIRQVNPVVVSALVSVALLGTAFGQLLFGRLGDLKGRRHVYGLGIGGDYPLSSTIMSEFANKRTRGSFIAAVFSMQGFGILASATVTMVVCLVFRSGSKPATAFDVPPEADVAWRLILMIGSVPAALTYYWRMMMPETARYTALVEQNVLQAAKDMEKVLDVSMSQITEENPLPPTTNAAYPLLSREFLWRHGRDLFACSANWFLLDIVFYSQVLFQSEIYKRYLNEKDEEDVYQEAFHLARIQAILAVCSTIPGYFFTVYFIDRVGRVKIQMMGFFFMAVSFFALGFPYYSHWTKGENHDNKGFMVIYGLAFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAVGKVGAIIGSVGFLWASHKEKEEGYPKGIGMKASLIILGGVCIVGMFVTYFFTKETMGRSLEENEDEQSHHAEEYNDL*