AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580025180.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025180.01.T01 MTR_5g023730 87.823 271 7 1 30 274 70 340 1.55e-165 475
MsG0580025180.01.T01 MTR_5g023730 95.238 105 3 1 275 379 447 549 1.21e-59 202
MsG0580025180.01.T01 MTR_5g008800 43.911 271 121 4 30 272 67 334 1.15e-67 223
MsG0580025180.01.T01 MTR_5g008800 51.000 100 45 1 275 374 445 540 7.67e-25 106
MsG0580025180.01.T01 MTR_8g074040 43.015 272 124 4 30 272 109 378 1.34e-63 214
MsG0580025180.01.T01 MTR_8g074040 49.000 100 47 1 275 374 489 584 1.13e-24 106
MsG0580025180.01.T01 MTR_5g008820 41.852 270 128 4 30 273 67 333 2.59e-63 212
MsG0580025180.01.T01 MTR_5g008820 49.000 100 47 1 275 374 443 538 6.28e-24 103
MsG0580025180.01.T01 MTR_8g074120 42.125 273 127 5 28 271 18 288 4.78e-61 205
MsG0580025180.01.T01 MTR_8g074120 54.000 100 42 1 275 374 400 495 1.66e-26 111
MsG0580025180.01.T01 MTR_8g074040 41.379 261 122 4 41 272 2 260 2.21e-58 197
MsG0580025180.01.T01 MTR_8g074040 49.000 100 47 1 275 374 371 466 9.36e-25 105
MsG0580025180.01.T01 MTR_2g044180 36.071 280 142 5 30 274 73 350 1.16e-54 189
MsG0580025180.01.T01 MTR_2g044180 44.762 105 49 2 275 374 459 559 6.07e-19 89.0
MsG0580025180.01.T01 MTR_3g064420 36.201 279 141 5 30 274 67 342 1.75e-54 189
MsG0580025180.01.T01 MTR_3g064420 44.762 105 46 3 275 371 451 551 1.78e-13 72.4
MsG0580025180.01.T01 MTR_4g121600 37.143 280 139 5 30 274 73 350 2.52e-54 188
MsG0580025180.01.T01 MTR_4g121600 47.619 105 46 2 275 374 459 559 3.16e-20 92.8
MsG0580025180.01.T01 MTR_5g076220 38.989 277 134 6 30 274 67 340 2.92e-51 180
MsG0580025180.01.T01 MTR_5g076220 44.762 105 49 3 275 374 449 549 1.35e-15 78.6
MsG0580025180.01.T01 MTR_5g076240 36.101 277 142 6 30 274 67 340 1.42e-50 178
MsG0580025180.01.T01 MTR_5g076240 47.619 105 46 3 275 374 448 548 1.01e-18 88.2
MsG0580025180.01.T01 MTR_5g076200 38.628 277 135 6 30 274 67 340 1.73e-50 178
MsG0580025180.01.T01 MTR_5g076200 44.762 105 49 3 275 374 449 549 9.27e-15 76.3
MsG0580025180.01.T01 MTR_0161s0050 39.068 279 133 5 30 274 67 342 1.26e-49 176
MsG0580025180.01.T01 MTR_0161s0050 45.714 105 48 3 275 374 451 551 3.40e-15 77.4
MsG0580025180.01.T01 MTR_2g044180 33.333 261 137 5 49 274 1 259 1.77e-44 160
MsG0580025180.01.T01 MTR_2g044180 44.762 105 49 2 275 374 368 468 5.93e-19 88.6
MsG0580025180.01.T01 MTR_1586s0010 26.667 210 131 6 28 234 95 284 1.07e-13 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580025180.01.T01 AT1G20560 40.146 274 131 4 30 272 69 340 2.40e-61 207
MsG0580025180.01.T01 AT1G20560 52.525 99 43 1 275 373 451 545 1.33e-24 105
MsG0580025180.01.T01 AT1G20560 39.313 262 126 4 42 272 3 262 4.56e-57 194
MsG0580025180.01.T01 AT1G20560 52.525 99 43 1 275 373 373 467 1.14e-24 105
MsG0580025180.01.T01 AT2G17650 41.343 283 124 5 30 272 114 394 8.91e-57 196
MsG0580025180.01.T01 AT2G17650 47.525 101 48 2 275 374 505 601 2.91e-20 93.2
MsG0580025180.01.T01 AT1G66120 39.209 278 133 7 30 274 67 341 1.16e-54 189
MsG0580025180.01.T01 AT5G16340 36.594 276 139 6 30 274 68 338 7.45e-51 179
MsG0580025180.01.T01 AT5G16340 48.544 103 46 3 275 374 447 545 4.07e-17 83.6
MsG0580025180.01.T01 AT5G16370 36.630 273 137 5 30 271 68 335 2.11e-50 177
MsG0580025180.01.T01 AT5G16370 47.573 103 47 3 275 374 447 545 2.52e-16 80.9
MsG0580025180.01.T01 AT1G21530 35.316 269 147 4 30 274 70 335 1.73e-49 175
MsG0580025180.01.T01 AT1G21530 41.509 106 51 4 275 373 445 546 4.19e-14 74.3
MsG0580025180.01.T01 AT1G21530 35.055 271 147 4 30 274 70 337 2.72e-49 174
MsG0580025180.01.T01 AT1G21530 41.509 106 51 4 275 373 447 548 4.13e-14 74.3
MsG0580025180.01.T01 AT1G21540 36.496 274 142 6 30 274 70 340 9.49e-49 173
MsG0580025180.01.T01 AT1G21540 42.308 104 51 3 275 373 450 549 6.35e-15 76.6
MsG0580025180.01.T01 AT1G65880 35.357 280 141 5 30 274 67 341 1.50e-48 173
MsG0580025180.01.T01 AT1G75960 35.379 277 141 5 30 274 68 338 3.63e-48 171
MsG0580025180.01.T01 AT1G75960 44.118 102 50 3 275 373 447 544 8.73e-14 73.2
MsG0580025180.01.T01 AT3G16910 34.050 279 146 5 30 272 75 351 4.55e-48 172
MsG0580025180.01.T01 AT3G16910 47.619 105 46 2 275 374 462 562 8.21e-21 94.7
MsG0580025180.01.T01 AT1G76290 37.226 274 134 7 28 271 63 328 1.78e-47 169
MsG0580025180.01.T01 AT1G76290 47.115 104 48 2 275 375 440 539 1.30e-16 82.0
MsG0580025180.01.T01 AT1G65890 34.657 277 147 4 30 274 67 341 2.23e-47 170
MsG0580025180.01.T01 AT1G77240 34.432 273 148 6 30 274 69 338 4.36e-46 166
MsG0580025180.01.T01 AT1G77240 45.098 102 48 4 275 373 448 544 2.03e-15 78.2
MsG0580025180.01.T01 AT1G68270 33.333 255 150 7 30 274 67 311 8.68e-34 132

Find 74 sgRNAs with CRISPR-Local

Find 406 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCACTTTCTTACAATAAC+TGG 0.223827 5:-14817578 None:intergenic
GCACACTATGAACTTCATTT+TGG 0.224185 5:+14816802 MsG0580025180.01.T01:CDS
TGATTATAAACTGCTCCTTT+TGG 0.243384 5:-14817168 None:intergenic
AAGAAGTTCATCGTATATTA+AGG 0.246952 5:-14817055 None:intergenic
GATCTTGTATTAGGACAATA+AGG 0.256872 5:-14816999 None:intergenic
TCATAGTGTGCTGGAGTATT+TGG 0.268936 5:-14816790 None:intergenic
CTTGGATTTGATGTTAATAT+TGG 0.274603 5:+14817530 MsG0580025180.01.T01:CDS
ATAGGATCACATTCATTTCT+AGG 0.276426 5:-14817111 None:intergenic
GTTGGCCATGATCTTGTATT+AGG 0.280602 5:-14817008 None:intergenic
GGGGTGGCTTGAAATTTCTT+TGG 0.296665 5:-14816978 None:intergenic
TCACCAAACACCACACTCTT+AGG 0.297868 5:-14818110 None:intergenic
TAATAGTCGCGAGTGAATTA+AGG 0.299417 5:-14817203 None:intergenic
AATTAAGGCGTGTGGTTTGT+AGG 0.342526 5:+14818214 MsG0580025180.01.T01:CDS
AGAGAAAATATTAAAAGTAT+TGG 0.343101 5:+14818176 MsG0580025180.01.T01:CDS
GAGAAAATATTAAAAGTATT+GGG 0.347029 5:+14818177 MsG0580025180.01.T01:CDS
AACTACACATCAGGCTCAAC+TGG 0.349825 5:+14817141 MsG0580025180.01.T01:CDS
AACAACATTAGCATTAATAT+TGG 0.350853 5:+14816876 MsG0580025180.01.T01:CDS
TGAGTTTGTGAGTTCATTAG+AGG 0.375347 5:+14817902 MsG0580025180.01.T01:CDS
GGGTGGCTTGAAATTTCTTT+GGG 0.377898 5:-14816977 None:intergenic
GAGGTATATCTTTCACTAGT+TGG 0.380173 5:-14817026 None:intergenic
TGAAGCAATTCATGTTCATA+AGG 0.387735 5:+14817371 MsG0580025180.01.T01:CDS
TTTGATGTTAATATTGGTTA+TGG 0.391504 5:+14817536 MsG0580025180.01.T01:CDS
TTATAAACAGGTTGCAACTT+TGG 0.394543 5:+14816765 MsG0580025180.01.T01:intron
ACCTTACCAGTTGAATTAAG+AGG 0.398367 5:-14818137 None:intergenic
AAGGTGAGTGTCACAGTTGC+TGG 0.399927 5:+14817467 MsG0580025180.01.T01:intron
ATGTTGTTGCATCTAGTTTG+AGG 0.405861 5:-14816861 None:intergenic
ATACGATGAACTTCTTGAAA+AGG 0.413737 5:+14817062 MsG0580025180.01.T01:CDS
GATTTGCCTCTTAATTCAAC+TGG 0.421617 5:+14818131 MsG0580025180.01.T01:CDS
ATTTGGTTAATGCCTGCTCT+TGG 0.425029 5:+14817300 MsG0580025180.01.T01:CDS
ATGGCCTCAAACCATTGTTC+AGG 0.438744 5:-14811769 None:intergenic
GCAATGGATGGTGTTTCATT+TGG 0.447289 5:+14817283 MsG0580025180.01.T01:CDS
GCCTCTTAATTCAACTGGTA+AGG 0.448931 5:+14818136 MsG0580025180.01.T01:CDS
TGATGATGGTGACGAGTGTT+TGG 0.449095 5:+14817986 MsG0580025180.01.T01:CDS
CTTAACAAAGTGGCAGAGCT+TGG 0.451298 5:+14817512 MsG0580025180.01.T01:CDS
TGGTTAATGCCTGCTCTTGG+TGG 0.459143 5:+14817303 MsG0580025180.01.T01:CDS
TATGGTATGACTGAAACATT+AGG 0.461838 5:+14817554 MsG0580025180.01.T01:CDS
GATACTTATGACATGGTTAG+TGG 0.465282 5:+14811700 None:intergenic
GTTCCTAAGAGTGTGGTGTT+TGG 0.467445 5:+14818107 MsG0580025180.01.T01:CDS
TACGATGAACTTCTTGAAAA+GGG 0.473555 5:+14817063 MsG0580025180.01.T01:CDS
TGCCTTTGCTGATGAGCAGA+TGG 0.475596 5:+14811729 MsG0580025180.01.T01:CDS
AGATCAATTAGATGCTCATA+TGG 0.476810 5:+14818085 MsG0580025180.01.T01:CDS
TGCTGATGAGCAGATGGGTC+GGG 0.486761 5:+14811735 MsG0580025180.01.T01:CDS
ACAGCTACTTTCAAAACCAT+TGG 0.487308 5:-14817948 None:intergenic
ATCTTGTATTAGGACAATAA+GGG 0.496289 5:-14816998 None:intergenic
GTTTGTGAGTTCATTAGAGG+TGG 0.501370 5:+14817905 MsG0580025180.01.T01:CDS
GATGTGTAGTTCACTGATAT+AGG 0.502126 5:-14817129 None:intergenic
GTGGTGTGACTCAATAATTA+AGG 0.509395 5:+14818199 MsG0580025180.01.T01:CDS
GGCTCAACTGGAATTCCAAA+AGG 0.522211 5:+14817153 MsG0580025180.01.T01:CDS
GCAATTGTGAAATTGAAAGA+TGG 0.524748 5:+14818023 MsG0580025180.01.T01:CDS
GTTGACATGTTTAGATGCAA+TGG 0.528978 5:+14817267 MsG0580025180.01.T01:CDS
ATATCAGTGAACTACACATC+AGG 0.529465 5:+14817132 MsG0580025180.01.T01:CDS
TTTCGATGTGAATCCTATGC+TGG 0.531354 5:+14817230 MsG0580025180.01.T01:CDS
TTGCTGATGAGCAGATGGGT+CGG 0.537811 5:+14811734 MsG0580025180.01.T01:CDS
TGGCCTCAAACCATTGTTCA+GGG 0.538403 5:-14811768 None:intergenic
ATGTTTGTGCCACCAAGAGC+AGG 0.540220 5:-14817312 None:intergenic
ATTCAAAATTCTTAACAAAG+TGG 0.541410 5:+14817502 MsG0580025180.01.T01:CDS
GAAATAATAGCACCTGCCAT+TGG 0.541429 5:-14816829 None:intergenic
ATTGTCCTAATACAAGATCA+TGG 0.544219 5:+14817003 MsG0580025180.01.T01:CDS
AAATGAAGTTCATAGTGTGC+TGG 0.549199 5:-14816799 None:intergenic
ACCCATCTGCTCATCAGCAA+AGG 0.578071 5:-14811731 None:intergenic
GCCTTTGCTGATGAGCAGAT+GGG 0.579112 5:+14811730 MsG0580025180.01.T01:CDS
TTCAATTTCACAATTGCACA+AGG 0.596592 5:-14818017 None:intergenic
CTGGTCCCTAACATGGCGCA+TGG 0.596816 5:-14811788 None:intergenic
TCGTATATTAAGGTATCTTG+AGG 0.597008 5:-14817045 None:intergenic
GAGCCCTGAACAATGGTTTG+AGG 0.609720 5:+14811765 MsG0580025180.01.T01:CDS
GTGGGGAGATATGATGATGA+TGG 0.634328 5:+14817972 MsG0580025180.01.T01:CDS
AGGTGATGAGCCCTGAACAA+TGG 0.638623 5:+14811758 MsG0580025180.01.T01:CDS
GACTCAATAATTAAGGCGTG+TGG 0.641193 5:+14818206 MsG0580025180.01.T01:CDS
TCTTGTATTAGGACAATAAG+GGG 0.643394 5:-14816997 None:intergenic
ACATGTTTAGATGCAATGGA+TGG 0.657007 5:+14817271 MsG0580025180.01.T01:CDS
AAAATATTAAAAGTATTGGG+TGG 0.659131 5:+14818180 MsG0580025180.01.T01:CDS
TGTATTAGGACAATAAGGGG+TGG 0.669864 5:-14816994 None:intergenic
TCATATGGTTCCTAAGAGTG+TGG 0.716052 5:+14818100 MsG0580025180.01.T01:CDS
TGATGAGCAGATGGGTCGGG+AGG 0.725987 5:+14811738 MsG0580025180.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTTAATATTTATAATTA+GGG - Chr5:14813446-14813465 None:intergenic 0.0%
!! AAAAGATATTATTTATTCTA+AGG + Chr5:14817878-14817897 MsG0580025180.01.T01:intron 10.0%
!! AAAGATATTATTTATTCTAA+GGG + Chr5:14817879-14817898 MsG0580025180.01.T01:intron 10.0%
!! AGAAGAATATTTAAATTATA+AGG + Chr5:14816554-14816573 MsG0580025180.01.T01:intron 10.0%
!! TAATCAAAACATAAATTAAA+AGG - Chr5:14816622-14816641 None:intergenic 10.0%
!! TTACAAAATACAATAAATTA+TGG + Chr5:14815527-14815546 MsG0580025180.01.T01:intron 10.0%
!! TTATATCGTTAAAAATAAAA+AGG + Chr5:14813790-14813809 MsG0580025180.01.T01:intron 10.0%
!!! ATATGTTGTTATTTTTTTAT+TGG - Chr5:14816082-14816101 None:intergenic 10.0%
!!! ATTTACATTTTTAATATGAA+CGG - Chr5:14813839-14813858 None:intergenic 10.0%
!!! ATTTTCAATTTAAATTATGT+TGG + Chr5:14812040-14812059 MsG0580025180.01.T01:intron 10.0%
!!! TATAAATAGAAATTTTATCT+TGG - Chr5:14813589-14813608 None:intergenic 10.0%
!! AAAAAAAACACGTATTAAAA+TGG + Chr5:14814558-14814577 MsG0580025180.01.T01:intron 15.0%
!! AAAATAAAAACTTACTTCTT+TGG - Chr5:14813279-14813298 None:intergenic 15.0%
!! AAAATAATAATAAATCTGTG+TGG - Chr5:14814644-14814663 None:intergenic 15.0%
!! AAATAAAAACTTACTTCTTT+GGG - Chr5:14813278-14813297 None:intergenic 15.0%
!! AATATAGAATTCAAAATACA+AGG + Chr5:14816210-14816229 MsG0580025180.01.T01:intron 15.0%
!! AGTGCATATTTAATTATTAA+GGG + Chr5:14815721-14815740 MsG0580025180.01.T01:intron 15.0%
!! ATAATATAAGAAGAAAATTG+AGG - Chr5:14816749-14816768 None:intergenic 15.0%
!! CGTTTATTAAATTTATGATT+TGG + Chr5:14812071-14812090 MsG0580025180.01.T01:intron 15.0%
!! GAATATTTAAATTATAAGGT+TGG + Chr5:14816558-14816577 MsG0580025180.01.T01:intron 15.0%
!! GTAAACAAATAAAAAACTAA+GGG + Chr5:14814999-14815018 MsG0580025180.01.T01:intron 15.0%
!! TAAAAAAGAAGAAAGTTTAT+CGG - Chr5:14813721-14813740 None:intergenic 15.0%
!! TAGTGCATATTTAATTATTA+AGG + Chr5:14815720-14815739 MsG0580025180.01.T01:intron 15.0%
!! TGTAAACAAATAAAAAACTA+AGG + Chr5:14814998-14815017 MsG0580025180.01.T01:intron 15.0%
!! TTACATTGATACATTATATT+TGG - Chr5:14812636-14812655 None:intergenic 15.0%
!! TTATATAGTCATTTGATAAA+TGG - Chr5:14816381-14816400 None:intergenic 15.0%
!! TTTCTTCTTATATTATAAAC+AGG + Chr5:14816753-14816772 MsG0580025180.01.T01:intron 15.0%
!!! AATAACATGTTTTTTCTTAA+TGG - Chr5:14814528-14814547 None:intergenic 15.0%
!!! ACGATATAATTTTACAAATT+TGG - Chr5:14814071-14814090 None:intergenic 15.0%
!!! AGAGAAAATATTAAAAGTAT+TGG + Chr5:14818176-14818195 MsG0580025180.01.T01:CDS 15.0%
!!! AGTAAGTTTTTATTAAAAAG+TGG + Chr5:14813313-14813332 MsG0580025180.01.T01:intron 15.0%
!!! AGTGTATATTTTAACAAAAA+AGG - Chr5:14815160-14815179 None:intergenic 15.0%
!!! ATATTTTAACAAAAAAGGAA+AGG - Chr5:14815155-14815174 None:intergenic 15.0%
!!! CTTGTTTCATATTTTTTATT+AGG - Chr5:14815446-14815465 None:intergenic 15.0%
!!! GAGAAAATATTAAAAGTATT+GGG + Chr5:14818177-14818196 MsG0580025180.01.T01:CDS 15.0%
!!! GATTTATTTTTTTTAAATGG+TGG + Chr5:14815641-14815660 MsG0580025180.01.T01:intron 15.0%
!!! GTAAGTTTTTATTTTTTTGA+AGG + Chr5:14813284-14813303 MsG0580025180.01.T01:intron 15.0%
!!! TGATTTAAAACATTCAAAAA+AGG + Chr5:14813936-14813955 MsG0580025180.01.T01:intron 15.0%
!!! TTAATACGTGTTTTTTTTAA+GGG - Chr5:14814556-14814575 None:intergenic 15.0%
!!! TTTAATACGTGTTTTTTTTA+AGG - Chr5:14814557-14814576 None:intergenic 15.0%
!! AAAAATAATCTAACACACTT+CGG + Chr5:14815323-14815342 MsG0580025180.01.T01:intron 20.0%
!! AACAACATTAGCATTAATAT+TGG + Chr5:14816876-14816895 MsG0580025180.01.T01:CDS 20.0%
!! AATAAGGAGAAATAGAAAAA+AGG - Chr5:14814906-14814925 None:intergenic 20.0%
!! AATTAACTGGTTATTCTAAT+TGG + Chr5:14812857-14812876 MsG0580025180.01.T01:intron 20.0%
!! ATATTTAATTATTAAGGGAG+AGG + Chr5:14815726-14815745 MsG0580025180.01.T01:intron 20.0%
!! ATTAAATTTCACTGAATCAA+CGG + Chr5:14813663-14813682 MsG0580025180.01.T01:intron 20.0%
!! ATTCAAAATTCTTAACAAAG+TGG + Chr5:14817502-14817521 MsG0580025180.01.T01:CDS 20.0%
!! ATTGAAGAACATAATTCTAT+TGG - Chr5:14812825-14812844 None:intergenic 20.0%
!! GAGAATACAAATTAATATAG+TGG + Chr5:14816439-14816458 MsG0580025180.01.T01:intron 20.0%
!! GAGGAATATAATAAAAAACT+TGG + Chr5:14816232-14816251 MsG0580025180.01.T01:intron 20.0%
!! TAAAATTATATCGTTACGAA+AGG + Chr5:14814077-14814096 MsG0580025180.01.T01:intron 20.0%
!! TATTTAATTATTAAGGGAGA+GGG + Chr5:14815727-14815746 MsG0580025180.01.T01:intron 20.0%
!! TTCGGAAAAAAAATAGTATT+GGG + Chr5:14815341-14815360 MsG0580025180.01.T01:intron 20.0%
!!! AAAATATTAAAAGTATTGGG+TGG + Chr5:14818180-14818199 MsG0580025180.01.T01:CDS 20.0%
!!! AAATAAAGTTTTTCAAAGAC+TGG - Chr5:14814589-14814608 None:intergenic 20.0%
!!! ATAAATTTTCTTTTCAAGGA+TGG + Chr5:14815781-14815800 MsG0580025180.01.T01:intron 20.0%
!!! ATTTTTTATTAGGCTTTTCT+TGG - Chr5:14815469-14815488 None:intergenic 20.0%
!!! GAGTATAAATTTTCTTTTCA+AGG + Chr5:14815777-14815796 MsG0580025180.01.T01:intron 20.0%
!!! GTATAGGAAAAAATTCTTTT+CGG - Chr5:14816717-14816736 None:intergenic 20.0%
!!! TAAATTTTCTTTTCAAGGAT+GGG + Chr5:14815782-14815801 MsG0580025180.01.T01:intron 20.0%
!!! TATAGTGCATTAATATTTTG+TGG - Chr5:14812229-14812248 None:intergenic 20.0%
!!! TCTAATATATTTTGAATGAG+AGG - Chr5:14815190-14815209 None:intergenic 20.0%
!!! TGTTGTTATTTTTTTATTGG+TGG - Chr5:14816079-14816098 None:intergenic 20.0%
!!! TTGTTAAGAATTTTGAATGA+TGG - Chr5:14817500-14817519 None:intergenic 20.0%
!!! TTTCATATTTTTTTTCCTTC+AGG + Chr5:14814302-14814321 MsG0580025180.01.T01:intron 20.0%
!!! TTTGATGTTAATATTGGTTA+TGG + Chr5:14817536-14817555 MsG0580025180.01.T01:CDS 20.0%
! AAGAAGTTCATCGTATATTA+AGG - Chr5:14817058-14817077 None:intergenic 25.0%
! AATCGATTACACTAATCATT+TGG + Chr5:14813146-14813165 MsG0580025180.01.T01:intron 25.0%
! AATTGTACACTATAGTAGAT+GGG + Chr5:14814952-14814971 MsG0580025180.01.T01:intron 25.0%
! ACGTAATTAGCAGTTAATTA+TGG + Chr5:14813214-14813233 MsG0580025180.01.T01:intron 25.0%
! ATAGAATTCAAAATACAAGG+AGG + Chr5:14816213-14816232 MsG0580025180.01.T01:intron 25.0%
! ATAGGTGAAATCATGTTTAA+AGG + Chr5:14817728-14817747 MsG0580025180.01.T01:intron 25.0%
! ATCTTGTATTAGGACAATAA+GGG - Chr5:14817001-14817020 None:intergenic 25.0%
! ATGTAATTCAAACATCTTTG+AGG - Chr5:14815130-14815149 None:intergenic 25.0%
! ATTATATTTGGTCATGAAGA+GGG - Chr5:14812624-14812643 None:intergenic 25.0%
! CATTAGAATGTCTTCAATAT+GGG + Chr5:14814614-14814633 MsG0580025180.01.T01:intron 25.0%
! CTGAATTATGTTGATCAAAA+GGG + Chr5:14817628-14817647 MsG0580025180.01.T01:intron 25.0%
! CTTCGGAAAAAAAATAGTAT+TGG + Chr5:14815340-14815359 MsG0580025180.01.T01:intron 25.0%
! CTTGGATTTGATGTTAATAT+TGG + Chr5:14817530-14817549 MsG0580025180.01.T01:CDS 25.0%
! CTTGTAAATTATCATGACAT+TGG + Chr5:14811965-14811984 MsG0580025180.01.T01:intron 25.0%
! GAAAGATAATGCAATGAATA+TGG - Chr5:14816157-14816176 None:intergenic 25.0%
! GAATTAATGTAGTCATCATA+GGG - Chr5:14812546-14812565 None:intergenic 25.0%
! GATGATTGAACTTGATTATT+GGG + Chr5:14812968-14812987 MsG0580025180.01.T01:intron 25.0%
! GGTAAACTGTAACAAAATAT+TGG - Chr5:14812804-14812823 None:intergenic 25.0%
! GTTGGTTAGGTAAATTTATT+TGG - Chr5:14816675-14816694 None:intergenic 25.0%
! GTTGTAATTCACATCTTATA+GGG + Chr5:14815749-14815768 MsG0580025180.01.T01:intron 25.0%
! TAAATAGTATTCCAGAGTAT+TGG + Chr5:14813244-14813263 MsG0580025180.01.T01:intron 25.0%
! TAGGTGAAATCATGTTTAAA+GGG + Chr5:14817729-14817748 MsG0580025180.01.T01:intron 25.0%
! TATAATGAGCAATTACATGT+TGG - Chr5:14816693-14816712 None:intergenic 25.0%
! TATAGTCATTTGATAAATGG+AGG - Chr5:14816378-14816397 None:intergenic 25.0%
! TGAATTATGTTGATCAAAAG+GGG + Chr5:14817629-14817648 MsG0580025180.01.T01:intron 25.0%
! TGCATGATATAATATATGCA+AGG + Chr5:14816031-14816050 MsG0580025180.01.T01:intron 25.0%
! TGTAATTCAAACATCTTTGA+GGG + Chr5:14815838-14815857 MsG0580025180.01.T01:intron 25.0%
! TGTAATTCAAACATCTTTGA+GGG - Chr5:14815857-14815838 None:intergenic 25.0%
! TTATCAATAGACCAAGTATT+TGG + Chr5:14814248-14814267 MsG0580025180.01.T01:intron 25.0%
! TTCAAATTGAAAGAACCATT+AGG - Chr5:14817851-14817870 None:intergenic 25.0%
! TTCAGAAGAGAATGAAAATA+AGG - Chr5:14814922-14814941 None:intergenic 25.0%
! TTGTAATTCACATCTTATAG+GGG + Chr5:14815750-14815769 MsG0580025180.01.T01:intron 25.0%
! TTTAAACATGATTTCACCTA+TGG - Chr5:14817729-14817748 None:intergenic 25.0%
!! AAATGTAGCTTGTCTAATTT+CGG + Chr5:14816476-14816495 MsG0580025180.01.T01:intron 25.0%
!! ATGATCATGTTAGATTTTCT+TGG + Chr5:14812422-14812441 MsG0580025180.01.T01:intron 25.0%
!! TAATGACCAATTTAAAACCA+TGG - Chr5:14812905-14812924 None:intergenic 25.0%
!! TTATTAGGCATTTTCTCATA+AGG + Chr5:14817448-14817467 MsG0580025180.01.T01:intron 25.0%
!!! AAATTTTCTTTTCAAGGATG+GGG + Chr5:14815783-14815802 MsG0580025180.01.T01:intron 25.0%
!!! AAGCTACATTTTAGTGTTTT+TGG - Chr5:14816467-14816486 None:intergenic 25.0%
!!! AGCTACATTTTAGTGTTTTT+GGG - Chr5:14816466-14816485 None:intergenic 25.0%
!!! AGTGCATATTTTAACATAAG+AGG + Chr5:14815806-14815825 MsG0580025180.01.T01:intron 25.0%
!!! AGTGTAGATTTTAACATAAG+AGG - Chr5:14815262-14815281 None:intergenic 25.0%
!!! ATAATTAGGGTCTTGTTAAT+CGG - Chr5:14813433-14813452 None:intergenic 25.0%
!!! ATGTATTTCAAGTTTCTCTT+AGG - Chr5:14815232-14815251 None:intergenic 25.0%
!!! GAATTCCAAATTTTTCAAAG+GGG + Chr5:14816580-14816599 MsG0580025180.01.T01:intron 25.0%
!!! GACTTGTTTTTAGTTATTGT+GGG + Chr5:14811930-14811949 MsG0580025180.01.T01:intron 25.0%
!!! GGAATTCCAAATTTTTCAAA+GGG + Chr5:14816579-14816598 MsG0580025180.01.T01:intron 25.0%
!!! GTGCATATTTTAACATAAGA+GGG + Chr5:14815807-14815826 MsG0580025180.01.T01:intron 25.0%
!!! GTGTAGATTTTAACATAAGA+GGG - Chr5:14815261-14815280 None:intergenic 25.0%
!!! TCATGAAAACTTGTTTGTTT+TGG - Chr5:14813520-14813539 None:intergenic 25.0%
!!! TGACTTGTTTTTAGTTATTG+TGG + Chr5:14811929-14811948 MsG0580025180.01.T01:intron 25.0%
!!! TGCATATTTTAACATAAGAG+GGG + Chr5:14815808-14815827 MsG0580025180.01.T01:intron 25.0%
!!! TGGAATTCCAAATTTTTCAA+AGG + Chr5:14816578-14816597 MsG0580025180.01.T01:intron 25.0%
!!! TGTATTTCAAGTTTCTCTTA+GGG - Chr5:14815231-14815250 None:intergenic 25.0%
!!! TGTTATTTTTTTATTGGTGG+TGG - Chr5:14816076-14816095 None:intergenic 25.0%
!!! TTCTATCCATGGTTTTAAAT+TGG + Chr5:14812896-14812915 MsG0580025180.01.T01:intron 25.0%
AAACAGAATGATGTCAGAAA+AGG - Chr5:14814674-14814693 None:intergenic 30.0%
AAATAGTTAATAAGCTCCAC+AGG + Chr5:14812943-14812962 MsG0580025180.01.T01:intron 30.0%
AACATGATCATTGTAGATGA+TGG - Chr5:14812413-14812432 None:intergenic 30.0%
AGAATTATTTCAGATCCTGA+AGG - Chr5:14814320-14814339 None:intergenic 30.0%
AGATCAATTAGATGCTCATA+TGG + Chr5:14818085-14818104 MsG0580025180.01.T01:CDS 30.0%
AGTTTGCAATAATTTCCAGA+AGG - Chr5:14817422-14817441 None:intergenic 30.0%
ATACGATGAACTTCTTGAAA+AGG + Chr5:14817062-14817081 MsG0580025180.01.T01:CDS 30.0%
ATAGGATCACATTCATTTCT+AGG - Chr5:14817114-14817133 None:intergenic 30.0%
ATATAATATATGCAAGGTCC+GGG + Chr5:14816037-14816056 MsG0580025180.01.T01:intron 30.0%
ATCTTCTAACTCCAAATACT+TGG - Chr5:14814262-14814281 None:intergenic 30.0%
ATTCTATAAGCGCGTAATTA+TGG + Chr5:14814335-14814354 MsG0580025180.01.T01:intron 30.0%
ATTCTTCTCTTAGACATTTG+TGG - Chr5:14816542-14816561 None:intergenic 30.0%
ATTGAGGTCTTCATATGTAT+AGG - Chr5:14816733-14816752 None:intergenic 30.0%
ATTGTCCTAATACAAGATCA+TGG + Chr5:14817003-14817022 MsG0580025180.01.T01:CDS 30.0%
CATTATATTTGGTCATGAAG+AGG - Chr5:14812625-14812644 None:intergenic 30.0%
CCATATTGAAGACATTCTAA+TGG - Chr5:14814616-14814635 None:intergenic 30.0%
CCATTAGAATGTCTTCAATA+TGG + Chr5:14814613-14814632 MsG0580025180.01.T01:intron 30.0%
CGAATTAATGTAGTCATCAT+AGG - Chr5:14812547-14812566 None:intergenic 30.0%
GAATTGTACACTATAGTAGA+TGG + Chr5:14814951-14814970 MsG0580025180.01.T01:intron 30.0%
GACTTTGATAGAAAACCTAA+TGG - Chr5:14816303-14816322 None:intergenic 30.0%
GATATAATATATGCAAGGTC+CGG + Chr5:14816036-14816055 MsG0580025180.01.T01:intron 30.0%
GATCTTGTATTAGGACAATA+AGG - Chr5:14817002-14817021 None:intergenic 30.0%
GCAATTGTGAAATTGAAAGA+TGG + Chr5:14818023-14818042 MsG0580025180.01.T01:CDS 30.0%
GCTGAATTATGTTGATCAAA+AGG + Chr5:14817627-14817646 MsG0580025180.01.T01:intron 30.0%
GGATGATTGAACTTGATTAT+TGG + Chr5:14812967-14812986 MsG0580025180.01.T01:intron 30.0%
GGTCATTAAATCACACAATT+AGG + Chr5:14812917-14812936 MsG0580025180.01.T01:intron 30.0%
GGTTGTAATTCACATCTTAT+AGG + Chr5:14815748-14815767 MsG0580025180.01.T01:intron 30.0%
GTCAACTTAGGAATTTCTAA+TGG + Chr5:14812489-14812508 MsG0580025180.01.T01:intron 30.0%
GTGTAATTCAAACATCTTTG+AGG + Chr5:14815837-14815856 MsG0580025180.01.T01:intron 30.0%
GTTTGCAATAATTTCCAGAA+GGG - Chr5:14817421-14817440 None:intergenic 30.0%
TACGATGAACTTCTTGAAAA+GGG + Chr5:14817063-14817082 MsG0580025180.01.T01:CDS 30.0%
TATGGTATGACTGAAACATT+AGG + Chr5:14817554-14817573 MsG0580025180.01.T01:CDS 30.0%
TCGTGCATGAATTAATTAAC+TGG + Chr5:14812844-14812863 MsG0580025180.01.T01:intron 30.0%
TCGTTTACCAACTTTAAACA+TGG + Chr5:14814189-14814208 MsG0580025180.01.T01:intron 30.0%
TCTTAAGCCTGCAAAAAAAA+CGG - Chr5:14812136-14812155 None:intergenic 30.0%
TCTTGTATTAGGACAATAAG+GGG - Chr5:14817000-14817019 None:intergenic 30.0%
TGAAGCAATTCATGTTCATA+AGG + Chr5:14817371-14817390 MsG0580025180.01.T01:CDS 30.0%
TGATAAGGTAAGTAAAGTCT+AGG - Chr5:14813007-14813026 None:intergenic 30.0%
TGGACCTGTCAAAATAAATT+TGG - Chr5:14812209-14812228 None:intergenic 30.0%
TTAGTTATTGTGGGATTTGT+TGG + Chr5:14811939-14811958 MsG0580025180.01.T01:intron 30.0%
TTATAAACAGGTTGCAACTT+TGG + Chr5:14816765-14816784 MsG0580025180.01.T01:intron 30.0%
TTCAATTTCACAATTGCACA+AGG - Chr5:14818020-14818039 None:intergenic 30.0%
TTCCACTTTCTTACAATAAC+TGG - Chr5:14817581-14817600 None:intergenic 30.0%
TTGCAAACTGTGACATTATT+AGG + Chr5:14817433-14817452 MsG0580025180.01.T01:intron 30.0%
TTTAGATGAGAATGAAAGCA+GGG - Chr5:14812584-14812603 None:intergenic 30.0%
TTTCTTAATGGCGTAAATTC+TGG - Chr5:14814516-14814535 None:intergenic 30.0%
! AAGGCTTTTATATATTGCCA+AGG + Chr5:14813955-14813974 MsG0580025180.01.T01:intron 30.0%
! TAATTTGGAGTTCAGTGATA+AGG - Chr5:14813022-14813041 None:intergenic 30.0%
! TAGATAAACAGTGTTGAACA+CGG - Chr5:14814381-14814400 None:intergenic 30.0%
! TCGTATATTAAGGTATCTTG+AGG - Chr5:14817048-14817067 None:intergenic 30.0%
! TGATTATAAACTGCTCCTTT+TGG - Chr5:14817171-14817190 None:intergenic 30.0%
! TTTGTCCCCTTTGAAAAATT+TGG - Chr5:14816588-14816607 None:intergenic 30.0%
! TTTTCTGACATCATTCTGTT+TGG + Chr5:14814673-14814692 MsG0580025180.01.T01:intron 30.0%
!! GTATTTCAAGTTTCTCTTAG+GGG - Chr5:14815230-14815249 None:intergenic 30.0%
!! TAGATTTTAACATAAGAGGG+AGG - Chr5:14815258-14815277 None:intergenic 30.0%
!! TGTTTTGTTGAATCATCCAA+TGG + Chr5:14817932-14817951 MsG0580025180.01.T01:CDS 30.0%
!!! AAAGGCTTTTTTGAATTCGA+TGG - Chr5:14814103-14814122 None:intergenic 30.0%
!!! TGGACCAAATTTATTTTGAC+AGG + Chr5:14812202-14812221 MsG0580025180.01.T01:intron 30.0%
AAAACATGAAGCACACCATT+AGG + Chr5:14816285-14816304 MsG0580025180.01.T01:intron 35.0%
AAAGGGAATACTTCAATGTC+AGG + Chr5:14817746-14817765 MsG0580025180.01.T01:intron 35.0%
AAATGAAGTTCATAGTGTGC+TGG - Chr5:14816802-14816821 None:intergenic 35.0%
AAATTTGGTCCACTAGAGTT+AGG - Chr5:14812194-14812213 None:intergenic 35.0%
AAGAGGGAACAAACAATAGT+TGG - Chr5:14812608-14812627 None:intergenic 35.0%
AAGGGAATACTTCAATGTCA+GGG + Chr5:14817747-14817766 MsG0580025180.01.T01:intron 35.0%
AAGGTTGAGACATCTTTCAT+AGG - Chr5:14812455-14812474 None:intergenic 35.0%
AATAGACCATGTACAAGAGT+GGG - Chr5:14814883-14814902 None:intergenic 35.0%
AATCCTTAACCAATACTCTG+AGG + Chr5:14813610-14813629 MsG0580025180.01.T01:intron 35.0%
AATTCACATCTTATAGGGGA+AGG + Chr5:14815754-14815773 MsG0580025180.01.T01:intron 35.0%
AATTTGGTCCACTAGAGTTA+GGG - Chr5:14812193-14812212 None:intergenic 35.0%
ACAAAACAAATGATGTGGGA+GGG - Chr5:14816508-14816527 None:intergenic 35.0%
ACAAACTAGTGTTCTATCCA+TGG + Chr5:14812885-14812904 MsG0580025180.01.T01:intron 35.0%
ACATGTTTAGATGCAATGGA+TGG + Chr5:14817271-14817290 MsG0580025180.01.T01:CDS 35.0%
ACCGTACAAAACAAATGATG+TGG - Chr5:14816513-14816532 None:intergenic 35.0%
ACCTTACCAGTTGAATTAAG+AGG - Chr5:14818140-14818159 None:intergenic 35.0%
AGAAAGGGGATCTCATAATT+TGG - Chr5:14813037-14813056 None:intergenic 35.0%
AGAGTTGTGAGATCATTACT+TGG + Chr5:14813541-14813560 MsG0580025180.01.T01:intron 35.0%
ATATCAGTGAACTACACATC+AGG + Chr5:14817132-14817151 MsG0580025180.01.T01:CDS 35.0%
ATCCTTAACCAATACTCTGA+GGG + Chr5:14813611-14813630 MsG0580025180.01.T01:intron 35.0%
ATGCTTAACCAATGTCATTG+GGG - Chr5:14813497-14813516 None:intergenic 35.0%
ATTACAACACACACCATTCT+TGG + Chr5:14814712-14814731 MsG0580025180.01.T01:intron 35.0%
ATTCACATCTTATAGGGGAA+GGG + Chr5:14815755-14815774 MsG0580025180.01.T01:intron 35.0%
CAACCATACTCATTGCATTT+CGG + Chr5:14816185-14816204 MsG0580025180.01.T01:intron 35.0%
CATAAGGTAACACATTTGTG+TGG + Chr5:14817387-14817406 MsG0580025180.01.T01:intron 35.0%
CCGTACAAAACAAATGATGT+GGG - Chr5:14816512-14816531 None:intergenic 35.0%
CTTTAGATGAGAATGAAAGC+AGG - Chr5:14812585-14812604 None:intergenic 35.0%
GAAATGTCAATGACCTAACT+CGG - Chr5:14814485-14814504 None:intergenic 35.0%
GAGAGAGATGAACTTTGTAA+AGG - Chr5:14814121-14814140 None:intergenic 35.0%
GAGGTATATCTTTCACTAGT+TGG - Chr5:14817029-14817048 None:intergenic 35.0%
GATGCTTAACCAATGTCATT+GGG - Chr5:14813498-14813517 None:intergenic 35.0%
GATGTGTAGTTCACTGATAT+AGG - Chr5:14817132-14817151 None:intergenic 35.0%
GATTTGCCTCTTAATTCAAC+TGG + Chr5:14818131-14818150 MsG0580025180.01.T01:CDS 35.0%
GGAACACTCTTCATTGTATT+TGG - Chr5:14817693-14817712 None:intergenic 35.0%
GGAGTTAGAAGATGATTCAT+TGG + Chr5:14814269-14814288 MsG0580025180.01.T01:intron 35.0%
GTCACTGTGACATTAAATCT+GGG + Chr5:14814756-14814775 MsG0580025180.01.T01:intron 35.0%
GTCCAGTTATTGTAAGAAAG+TGG + Chr5:14817576-14817595 MsG0580025180.01.T01:intron 35.0%
GTGGTGTGACTCAATAATTA+AGG + Chr5:14818199-14818218 MsG0580025180.01.T01:CDS 35.0%
GTTGACATGTTTAGATGCAA+TGG + Chr5:14817267-14817286 MsG0580025180.01.T01:CDS 35.0%
TAACCGAAATGCAATGAGTA+TGG - Chr5:14816191-14816210 None:intergenic 35.0%
TAATAGTCGCGAGTGAATTA+AGG - Chr5:14817206-14817225 None:intergenic 35.0%
TAATGGCGTAAATTCTGGTA+TGG - Chr5:14814511-14814530 None:intergenic 35.0%
TACAAAACAAATGATGTGGG+AGG - Chr5:14816509-14816528 None:intergenic 35.0%
TATAATATATGCAAGGTCCG+GGG + Chr5:14816038-14816057 MsG0580025180.01.T01:intron 35.0%
TCATTAAGTGACTGCAAAAC+TGG - Chr5:14813182-14813201 None:intergenic 35.0%
TGAGTTTGTGAGTTCATTAG+AGG + Chr5:14817902-14817921 MsG0580025180.01.T01:CDS 35.0%
TGTCACTGTGACATTAAATC+TGG + Chr5:14814755-14814774 MsG0580025180.01.T01:intron 35.0%
TTACAACACACACCATTCTT+GGG + Chr5:14814713-14814732 MsG0580025180.01.T01:intron 35.0%
! AAGTGAGTCATGAAGCTTTT+AGG + Chr5:14817786-14817805 MsG0580025180.01.T01:intron 35.0%
! ACAGCTACTTTCAAAACCAT+TGG - Chr5:14817951-14817970 None:intergenic 35.0%
! ACCTATGGTTTTCCATCATA+TGG - Chr5:14817714-14817733 None:intergenic 35.0%
! AGTGAGTCATGAAGCTTTTA+GGG + Chr5:14817787-14817806 MsG0580025180.01.T01:intron 35.0%
! ATGTTGTTGCATCTAGTTTG+AGG - Chr5:14816864-14816883 None:intergenic 35.0%
! ATTCAAACATCTTTGAGGGA+AGG + Chr5:14815842-14815861 MsG0580025180.01.T01:intron 35.0%
! GCACACTATGAACTTCATTT+TGG + Chr5:14816802-14816821 MsG0580025180.01.T01:CDS 35.0%
! GGATAGAACACTAGTTTGTA+TGG - Chr5:14812884-14812903 None:intergenic 35.0%
! GTTTGAGCCATGTTTAAAGT+TGG - Chr5:14814199-14814218 None:intergenic 35.0%
! TAATCGGTGTCTTTGTCTTT+GGG - Chr5:14813417-14813436 None:intergenic 35.0%
! TCCATATGATGGAAAACCAT+AGG + Chr5:14817710-14817729 MsG0580025180.01.T01:intron 35.0%
! TCTCATAATTTGGAGTTCAG+TGG - Chr5:14813027-14813046 None:intergenic 35.0%
! TGAGCAATTACATGTTGGTT+AGG - Chr5:14816688-14816707 None:intergenic 35.0%
! TTAATCGGTGTCTTTGTCTT+TGG - Chr5:14813418-14813437 None:intergenic 35.0%
! TTCAAACATCTTTGAGGGAA+GGG + Chr5:14815843-14815862 MsG0580025180.01.T01:intron 35.0%
!! ACTTCATTTTGGTGTACCAA+TGG + Chr5:14816813-14816832 MsG0580025180.01.T01:CDS 35.0%
!! ATCCTATGCTGGTGTTTTTA+TGG + Chr5:14817241-14817260 MsG0580025180.01.T01:CDS 35.0%
!! ATGAAGAGTGTTCCATATGA+TGG + Chr5:14817699-14817718 MsG0580025180.01.T01:intron 35.0%
!! TATTTTGAATGAGAGGTGAG+AGG - Chr5:14815183-14815202 None:intergenic 35.0%
!! TTTTGAAAGTAGCTGTTGTG+GGG + Chr5:14817955-14817974 MsG0580025180.01.T01:CDS 35.0%
!!! ATTTTTTTATTGGTGGTGGC+CGG - Chr5:14816072-14816091 None:intergenic 35.0%
!!! CCCACATCATTTGTTTTGTA+CGG + Chr5:14816509-14816528 MsG0580025180.01.T01:intron 35.0%
!!! GTTTTGAAAGTAGCTGTTGT+GGG + Chr5:14817954-14817973 MsG0580025180.01.T01:CDS 35.0%
!!! TTCTTGTCCGTTTTTTTTGC+AGG + Chr5:14812126-14812145 MsG0580025180.01.T01:intron 35.0%
!!! TTTTTTTGCAGGCTTAAGAG+AGG + Chr5:14812137-14812156 MsG0580025180.01.T01:intron 35.0%
AACGGACAAGAACTGTTACA+CGG - Chr5:14812118-14812137 None:intergenic 40.0%
AAGCTCCATTACTCACAGAA+AGG - Chr5:14813053-14813072 None:intergenic 40.0%
ACAAGAGTGGGGAAAATACT+TGG - Chr5:14814871-14814890 None:intergenic 40.0%
ACACACTGTAGTTAGAACCT+TGG - Chr5:14813975-14813994 None:intergenic 40.0%
ACACATTGTCACACAACATC+TGG + Chr5:14814787-14814806 MsG0580025180.01.T01:intron 40.0%
ACATTAAATCTGGGCCACAA+AGG - Chr5:14814829-14814848 None:intergenic 40.0%
AGCTCCATTACTCACAGAAA+GGG - Chr5:14813052-14813071 None:intergenic 40.0%
ATAGACCATGTACAAGAGTG+GGG - Chr5:14814882-14814901 None:intergenic 40.0%
ATCCTCCATTACTCACAGAA+AGG - Chr5:14813103-14813122 None:intergenic 40.0%
ATTTGGTTAATGCCTGCTCT+TGG + Chr5:14817300-14817319 MsG0580025180.01.T01:CDS 40.0%
CAAAACAAATGATGTGGGAG+GGG - Chr5:14816507-14816526 None:intergenic 40.0%
CAAGAGTGGGGAAAATACTT+GGG - Chr5:14814870-14814889 None:intergenic 40.0%
CACATTGTCACACAACATCT+GGG + Chr5:14814788-14814807 MsG0580025180.01.T01:intron 40.0%
CATTAGGTAACCTAACACCT+AGG - Chr5:14817835-14817854 None:intergenic 40.0%
CCTAACTCGGTCTTAGAATA+AGG - Chr5:14814472-14814491 None:intergenic 40.0%
CTAGGTGTTAGGTTACCTAA+TGG + Chr5:14817833-14817852 MsG0580025180.01.T01:intron 40.0%
GAAATAATAGCACCTGCCAT+TGG - Chr5:14816832-14816851 None:intergenic 40.0%
GAATAGACCATGTACAAGAG+TGG - Chr5:14814884-14814903 None:intergenic 40.0%
GACTCAATAATTAAGGCGTG+TGG + Chr5:14818206-14818225 MsG0580025180.01.T01:CDS 40.0%
GCAATAATTTCCAGAAGGGT+AGG - Chr5:14817417-14817436 None:intergenic 40.0%
GCAATGGATGGTGTTTCATT+TGG + Chr5:14817283-14817302 MsG0580025180.01.T01:CDS 40.0%
GCCTCTTAATTCAACTGGTA+AGG + Chr5:14818136-14818155 MsG0580025180.01.T01:CDS 40.0%
GGATGCTTAACCAATGTCAT+TGG - Chr5:14813499-14813518 None:intergenic 40.0%
GGGTGGCTTGAAATTTCTTT+GGG - Chr5:14816980-14816999 None:intergenic 40.0%
GGGTTGTATAACCAATACTC+TGG - Chr5:14813258-14813277 None:intergenic 40.0%
GTAGTCATCATAGGGAGATA+GGG - Chr5:14812538-14812557 None:intergenic 40.0%
GTCACCGTGACATTAAATCT+GGG - Chr5:14814838-14814857 None:intergenic 40.0%
GTCCATAAAAACACCAGCAT+AGG - Chr5:14817246-14817265 None:intergenic 40.0%
GTTGGCCATGATCTTGTATT+AGG - Chr5:14817011-14817030 None:intergenic 40.0%
GTTTGTGAGTTCATTAGAGG+TGG + Chr5:14817905-14817924 MsG0580025180.01.T01:CDS 40.0%
TACACAACACAACACCTTTG+TGG + Chr5:14814812-14814831 MsG0580025180.01.T01:intron 40.0%
TACACTATAGTAGATGGGTG+TGG + Chr5:14814957-14814976 MsG0580025180.01.T01:intron 40.0%
TAGTTAATAAGCTCCACAGG+AGG + Chr5:14812946-14812965 MsG0580025180.01.T01:intron 40.0%
TCATATGGTTCCTAAGAGTG+TGG + Chr5:14818100-14818119 MsG0580025180.01.T01:CDS 40.0%
TCCTCCATTACTCACAGAAA+GGG - Chr5:14813102-14813121 None:intergenic 40.0%
TGTAGTCATCATAGGGAGAT+AGG - Chr5:14812539-14812558 None:intergenic 40.0%
TGTATTAGGACAATAAGGGG+TGG - Chr5:14816997-14817016 None:intergenic 40.0%
TGTCACCGTGACATTAAATC+TGG - Chr5:14814839-14814858 None:intergenic 40.0%
TTAAGAGAGGCGGATCTAAA+CGG + Chr5:14812150-14812169 MsG0580025180.01.T01:intron 40.0%
TTTCGATGTGAATCCTATGC+TGG + Chr5:14817230-14817249 MsG0580025180.01.T01:CDS 40.0%
! AATCGGTGTCTTTGTCTTTG+GGG - Chr5:14813416-14813435 None:intergenic 40.0%
! ATTTTCCCCACTCTTGTACA+TGG + Chr5:14814874-14814893 MsG0580025180.01.T01:intron 40.0%
! TCAAACATCTTTGAGGGAAG+GGG + Chr5:14815844-14815863 MsG0580025180.01.T01:intron 40.0%
! TCATAGTGTGCTGGAGTATT+TGG - Chr5:14816793-14816812 None:intergenic 40.0%
! TGAACTTAGCTCAGTTGGTA+TGG + Chr5:14816004-14816023 MsG0580025180.01.T01:intron 40.0%
! TTCAAGTTTCTCTTAGGGGT+GGG - Chr5:14815226-14815245 None:intergenic 40.0%
!! AGGGGCTATTGACTTTATGA+TGG + Chr5:14817647-14817666 MsG0580025180.01.T01:intron 40.0%
!! AGTCATGAAGCTTTTAGGGA+TGG + Chr5:14817791-14817810 MsG0580025180.01.T01:intron 40.0%
!! ATGAAGCTTTTAGGGATGGT+TGG + Chr5:14817795-14817814 MsG0580025180.01.T01:intron 40.0%
!! CCTTATTCTAAGACCGAGTT+AGG + Chr5:14814469-14814488 MsG0580025180.01.T01:intron 40.0%
!! CTTTTAGGGATGGTTGGTAT+AGG + Chr5:14817801-14817820 MsG0580025180.01.T01:intron 40.0%
!! TTTCAAGTTTCTCTTAGGGG+TGG - Chr5:14815227-14815246 None:intergenic 40.0%
!!! GGTTTTGAAAGTAGCTGTTG+TGG + Chr5:14817953-14817972 MsG0580025180.01.T01:CDS 40.0%
!!! GTGTGCTTCATGTTTTGACT+AGG - Chr5:14816281-14816300 None:intergenic 40.0%
!!! TTTTTTTATTGGTGGTGGCC+GGG - Chr5:14816071-14816090 None:intergenic 40.0%
AACCAATGTCATTGGGGTAC+TGG - Chr5:14813491-14813510 None:intergenic 45.0%
AACCAGTACCCCAATGACAT+TGG + Chr5:14813486-14813505 MsG0580025180.01.T01:intron 45.0%
AACCTTGTCACCATACACAG+TGG - Chr5:14812389-14812408 None:intergenic 45.0%
AACTACACATCAGGCTCAAC+TGG + Chr5:14817141-14817160 MsG0580025180.01.T01:CDS 45.0%
ATGGCCTCAAACCATTGTTC+AGG - Chr5:14811772-14811791 None:intergenic 45.0%
CAAGTTCAATCATCCTCCTG+TGG - Chr5:14812962-14812981 None:intergenic 45.0%
CATCGTGAACTTAGCTCAGT+TGG + Chr5:14815999-14816018 MsG0580025180.01.T01:intron 45.0%
CCTCCATTACTCACAGAAAG+GGG - Chr5:14813101-14813120 None:intergenic 45.0%
CCTTGTCTCCTGCTCAAAAT+CGG - Chr5:14811820-14811839 None:intergenic 45.0%
CTTAACAAAGTGGCAGAGCT+TGG + Chr5:14817512-14817531 MsG0580025180.01.T01:CDS 45.0%
GATCCCCTTTCTGTGAGTAA+TGG + Chr5:14813045-14813064 MsG0580025180.01.T01:intron 45.0%
GCTCCATTACTCACAGAAAG+GGG - Chr5:14813051-14813070 None:intergenic 45.0%
GGCTCAACTGGAATTCCAAA+AGG + Chr5:14817153-14817172 MsG0580025180.01.T01:CDS 45.0%
GGGGTGGCTTGAAATTTCTT+TGG - Chr5:14816981-14817000 None:intergenic 45.0%
GTGGCCCAGATTTAATGTCA+CGG + Chr5:14814831-14814850 MsG0580025180.01.T01:intron 45.0%
TCAAGTTTCTCTTAGGGGTG+GGG - Chr5:14815225-14815244 None:intergenic 45.0%
TCACCAAACACCACACTCTT+AGG - Chr5:14818113-14818132 None:intergenic 45.0%
TGAGAATGAAAGCAGGGCAA+AGG - Chr5:14812578-14812597 None:intergenic 45.0%
TGGCCTCAAACCATTGTTCA+GGG - Chr5:14811771-14811790 None:intergenic 45.0%
TTTGCCATCCCTAACTCTAG+TGG + Chr5:14812182-14812201 MsG0580025180.01.T01:intron 45.0%
! GGATGGTTGGTATAGGACTA+GGG + Chr5:14817808-14817827 MsG0580025180.01.T01:intron 45.0%
! GTGGGGAGATATGATGATGA+TGG + Chr5:14817972-14817991 MsG0580025180.01.T01:CDS 45.0%
! GTTCCTAAGAGTGTGGTGTT+TGG + Chr5:14818107-14818126 MsG0580025180.01.T01:CDS 45.0%
! TTCTGCTTGCTGGTCAACTT+AGG + Chr5:14812477-14812496 MsG0580025180.01.T01:intron 45.0%
! TTTTGCAGGCTTAAGAGAGG+CGG + Chr5:14812140-14812159 MsG0580025180.01.T01:intron 45.0%
!! AACCTTTAGAGCACTCAACC+AGG - Chr5:14812324-14812343 None:intergenic 45.0%
!! ACCATTCTTGGGAAGCACTT+GGG + Chr5:14814724-14814743 MsG0580025180.01.T01:intron 45.0%
!! AGGAAACTGATCGGTGTCAA+AGG - Chr5:14812355-14812374 None:intergenic 45.0%
!! CATTTTGGTGTACCAATGGC+AGG + Chr5:14816817-14816836 MsG0580025180.01.T01:CDS 45.0%
!! GCTCGTTCTAGGAAACTGAT+CGG - Chr5:14812364-14812383 None:intergenic 45.0%
!! TGATGATGGTGACGAGTGTT+TGG + Chr5:14817986-14818005 MsG0580025180.01.T01:CDS 45.0%
!! TGCCCTCAGAGTATTGGTTA+AGG - Chr5:14813616-14813635 None:intergenic 45.0%
!!! TTTTTTATTGGTGGTGGCCG+GGG - Chr5:14816070-14816089 None:intergenic 45.0%
!! ATATTAAATTTCATATTATA+AGG + Chr5:14813455-14813474 MsG0580025180.01.T01:intron 5.0%
!! GAAATTTAATATTTATAATT+AGG - Chr5:14813447-14813466 None:intergenic 5.0%
!!! AATGATTTATTTTTTTTAAA+TGG + Chr5:14815638-14815657 MsG0580025180.01.T01:intron 5.0%
!!! TCATATATATATATTTTTTT+TGG + Chr5:14814404-14814423 MsG0580025180.01.T01:intron 5.0%
AACCAGTGCCCTCAGAGTAT+TGG - Chr5:14813622-14813641 None:intergenic 50.0%
AAGGTGAGTGTCACAGTTGC+TGG + Chr5:14817467-14817486 MsG0580025180.01.T01:intron 50.0%
ACAACAGCATCAACAGGACC+AGG + Chr5:14811861-14811880 MsG0580025180.01.T01:intron 50.0%
ACCCAAGTGCTTCCCAAGAA+TGG - Chr5:14814728-14814747 None:intergenic 50.0%
ACCCATCTGCTCATCAGCAA+AGG - Chr5:14811734-14811753 None:intergenic 50.0%
AGAGTTAGGGATGGCAAAGC+AGG - Chr5:14812180-14812199 None:intergenic 50.0%
AGCCACTGTGTATGGTGACA+AGG + Chr5:14812384-14812403 MsG0580025180.01.T01:intron 50.0%
AGGTGATGAGCCCTGAACAA+TGG + Chr5:14811758-14811777 MsG0580025180.01.T01:CDS 50.0%
ATGTTTGTGCCACCAAGAGC+AGG - Chr5:14817315-14817334 None:intergenic 50.0%
CCCCTTTCTGTGAGTAATGG+AGG + Chr5:14813048-14813067 MsG0580025180.01.T01:intron 50.0%
CGTTACCATGACACAAGACC+TGG + Chr5:14812303-14812322 MsG0580025180.01.T01:intron 50.0%
GACCTGGTTGAGTGCTCTAA+AGG + Chr5:14812319-14812338 MsG0580025180.01.T01:intron 50.0%
GAGCCCTGAACAATGGTTTG+AGG + Chr5:14811765-14811784 MsG0580025180.01.T01:CDS 50.0%
GCCTTTGCTGATGAGCAGAT+GGG + Chr5:14811730-14811749 MsG0580025180.01.T01:CDS 50.0%
TCAACCTTGCTTCTGCTTGC+TGG + Chr5:14812467-14812486 MsG0580025180.01.T01:intron 50.0%
TGCCTTTGCTGATGAGCAGA+TGG + Chr5:14811729-14811748 MsG0580025180.01.T01:CDS 50.0%
TGCTCAAAATCGGTGCGATC+TGG - Chr5:14811810-14811829 None:intergenic 50.0%
TGGTATAGGACTAGGGACCT+AGG + Chr5:14817815-14817834 MsG0580025180.01.T01:intron 50.0%
TGGTCCACTAGAGTTAGGGA+TGG - Chr5:14812189-14812208 None:intergenic 50.0%
TGGTTAATGCCTGCTCTTGG+TGG + Chr5:14817303-14817322 MsG0580025180.01.T01:CDS 50.0%
TTGACCAGCAAGCAGAAGCA+AGG - Chr5:14812474-14812493 None:intergenic 50.0%
TTGCTGATGAGCAGATGGGT+CGG + Chr5:14811734-14811753 MsG0580025180.01.T01:CDS 50.0%
! AACCAATACTCTGAGGGCAC+TGG + Chr5:14813617-14813636 MsG0580025180.01.T01:intron 50.0%
! CCGATTTTGAGCAGGAGACA+AGG + Chr5:14811817-14811836 MsG0580025180.01.T01:intron 50.0%
! CTCAACCAGGTCTTGTGTCA+TGG - Chr5:14812311-14812330 None:intergenic 50.0%
! GGGATGGTTGGTATAGGACT+AGG + Chr5:14817807-14817826 MsG0580025180.01.T01:intron 50.0%
! TGTCATGGTAACGTCCTCAC+TGG - Chr5:14812296-14812315 None:intergenic 50.0%
!! CACCATTCTTGGGAAGCACT+TGG + Chr5:14814723-14814742 MsG0580025180.01.T01:intron 50.0%
!! TCACTGGTTCTGGCTCTGTA+CGG - Chr5:14812280-14812299 None:intergenic 50.0%
!! TGTCTTTGTCTTTGGGGCAC+TGG - Chr5:14813410-14813429 None:intergenic 50.0%
!!! AGATCGCACCGATTTTGAGC+AGG + Chr5:14811809-14811828 MsG0580025180.01.T01:intron 50.0%
ACACAGTGGCTGCTCGTTCT+AGG - Chr5:14812375-14812394 None:intergenic 55.0%
GAACGAGCAGCCACTGTGTA+TGG + Chr5:14812376-14812395 MsG0580025180.01.T01:intron 55.0%
GCGGCAACAACAGCATCAAC+AGG + Chr5:14811855-14811874 MsG0580025180.01.T01:intron 55.0%
GGACTAGGGACCTAGGTGTT+AGG + Chr5:14817822-14817841 MsG0580025180.01.T01:intron 55.0%
GTACAGAGCCAGAACCAGTG+AGG + Chr5:14812279-14812298 MsG0580025180.01.T01:intron 55.0%
GTGACTGCAAAACTGGTCGC+TGG - Chr5:14813175-14813194 None:intergenic 55.0%
GTGCGATCTGGTCCCTAACA+TGG - Chr5:14811798-14811817 None:intergenic 55.0%
TGAGGCCATGCGCCATGTTA+GGG + Chr5:14811783-14811802 MsG0580025180.01.T01:intron 55.0%
TGCTGATGAGCAGATGGGTC+GGG + Chr5:14811735-14811754 MsG0580025180.01.T01:CDS 55.0%
TGTCCTACTAGTCCTGCTCC+TGG - Chr5:14811894-14811913 None:intergenic 55.0%
TTGAGGCCATGCGCCATGTT+AGG + Chr5:14811782-14811801 MsG0580025180.01.T01:intron 55.0%
!! GGTAACGTCCTCACTGGTTC+TGG - Chr5:14812290-14812309 None:intergenic 55.0%
AAGGTCCGGGGTTCAAACCC+CGG + Chr5:14816050-14816069 MsG0580025180.01.T01:intron 60.0%
ACTAGTCCTGCTCCTGGTCC+TGG - Chr5:14811888-14811907 None:intergenic 60.0%
CTGGTCCCTAACATGGCGCA+TGG - Chr5:14811791-14811810 None:intergenic 60.0%
GCATCAACAGGACCAGGACC+AGG + Chr5:14811867-14811886 MsG0580025180.01.T01:intron 60.0%
GTGTGGTGCACCTACCCTTC+TGG + Chr5:14817404-14817423 MsG0580025180.01.T01:intron 60.0%
TGAGCAGGAGACAAGGCCAG+AGG + Chr5:14811824-14811843 MsG0580025180.01.T01:intron 60.0%
TGATGAGCAGATGGGTCGGG+AGG + Chr5:14811738-14811757 MsG0580025180.01.T01:CDS 60.0%
TGCTGTTGTTGCCGCCTCCT+CGG - Chr5:14811850-14811869 None:intergenic 60.0%
! GGACCAGGAGCAGGACTAGT+AGG + Chr5:14811888-14811907 MsG0580025180.01.T01:intron 60.0%
!! TGGTTCTGGCTCTGTACGGC+TGG - Chr5:14812276-14812295 None:intergenic 60.0%
ACAGGACCAGGACCAGGACC+AGG + Chr5:14811873-14811892 MsG0580025180.01.T01:intron 65.0%
AAGGCCAGAGGCCGAGGAGG+CGG + Chr5:14811836-14811855 MsG0580025180.01.T01:intron 70.0%
CCAGGACCAGGACCAGGAGC+AGG + Chr5:14811879-14811898 MsG0580025180.01.T01:intron 70.0%
CCTGCTCCTGGTCCTGGTCC+TGG - Chr5:14811882-14811901 None:intergenic 70.0%
GACAAGGCCAGAGGCCGAGG+AGG + Chr5:14811833-14811852 MsG0580025180.01.T01:intron 70.0%
GGAGACAAGGCCAGAGGCCG+AGG + Chr5:14811830-14811849 MsG0580025180.01.T01:intron 70.0%
GGTGGCCGGGGTTTGAACCC+CGG - Chr5:14816058-14816077 None:intergenic 70.0%
GTTGCCGCCTCCTCGGCCTC+TGG - Chr5:14811843-14811862 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr5 gene 14811712 14818235 14811712 ID=MsG0580025180.01;Name=MsG0580025180.01
Chr5 mRNA 14811712 14818235 14811712 ID=MsG0580025180.01.T01;Parent=MsG0580025180.01;Name=MsG0580025180.01.T01;_AED=0.39;_eAED=0.39;_QI=0|0|0|1|1|1|4|0|385
Chr5 exon 14811712 14811798 14811712 ID=MsG0580025180.01.T01:exon:5914;Parent=MsG0580025180.01.T01
Chr5 exon 14816775 14817392 14816775 ID=MsG0580025180.01.T01:exon:5915;Parent=MsG0580025180.01.T01
Chr5 exon 14817470 14817586 14817470 ID=MsG0580025180.01.T01:exon:5916;Parent=MsG0580025180.01.T01
Chr5 exon 14817900 14818235 14817900 ID=MsG0580025180.01.T01:exon:5917;Parent=MsG0580025180.01.T01
Chr5 CDS 14811712 14811798 14811712 ID=MsG0580025180.01.T01:cds;Parent=MsG0580025180.01.T01
Chr5 CDS 14816775 14817392 14816775 ID=MsG0580025180.01.T01:cds;Parent=MsG0580025180.01.T01
Chr5 CDS 14817470 14817586 14817470 ID=MsG0580025180.01.T01:cds;Parent=MsG0580025180.01.T01
Chr5 CDS 14817900 14818235 14817900 ID=MsG0580025180.01.T01:cds;Parent=MsG0580025180.01.T01
Gene Sequence

>MsG0580025180.01.T01

ATGGTTAGTGGCGTTGTTGCCTTTGCTGATGAGCAGATGGGTCGGGAGGTGATGAGCCCTGAACAATGGTTTGAGGCCATGCGCCATGTTGCAACTTTGGCACCAAATACTCCAGCACACTATGAACTTCATTTTGGTGTACCAATGGCAGGTGCTATTATTTCTTCACTTAACCTCAAACTAGATGCAACAACATTAGCATTAATATTGGAACAGTTAGAGTCTTGCAAAATCATATTTGTAGACTATGAGTTTATTGATTCTGTACTCAAAGCATCAAAAATAATTTCCCAAAGAAATTTCAAGCCACCCCTTATTGTCCTAATACAAGATCATGGCCAACTAGTGAAAGATATACCTCAAGATACCTTAATATACGATGAACTTCTTGAAAAGGGACAAAAAGATTTTAAGATTTCAATGCCTAGAAATGAATGTGATCCTATATCAGTGAACTACACATCAGGCTCAACTGGAATTCCAAAAGGAGCAGTTTATAATCATAGAAGTGTCTACCTTAATTCACTCGCGACTATTACTCGTTTCGATGTGAATCCTATGCTGGTGTTTTTATGGACAGTTGACATGTTTAGATGCAATGGATGGTGTTTCATTTGGTTAATGCCTGCTCTTGGTGGCACAAACATTTGTCTTAGAAATGATTTTTCAGCAAAAGATATTTTTGAAGCAATTCATGTTCATAAGGTGAGTGTCACAGTTGCTGGTATATTACCATCATTCAAAATTCTTAACAAAGTGGCAGAGCTTGGATTTGATGTTAATATTGGTTATGGTATGACTGAAACATTAGGTCCAGTTATTGGTGAGTTTGTGAGTTCATTAGAGGTGGAAGCTGTTTTGTTGAATCATCCAATGGTTTTGAAAGTAGCTGTTGTGGGGAGATATGATGATGATGGTGACGAGTGTTTGGTTGAGTCACCTTGTGCAATTGTGAAATTGAAAGATGGATGTAGTGCTAATGTTGAAGATATTATCAAGTTTTGTGAAGATCAATTAGATGCTCATATGGTTCCTAAGAGTGTGGTGTTTGGTGATTTGCCTCTTAATTCAACTGGTAAGGTACAAAAGTTTGTTATTAGAGAAAATATTAAAAGTATTGGGTGGTGTGACTCAATAATTAAGGCGTGTGGTTTGTAG

Protein sequence

>MsG0580025180.01.T01

MVSGVVAFADEQMGREVMSPEQWFEAMRHVATLAPNTPAHYELHFGVPMAGAIISSLNLKLDATTLALILEQLESCKIIFVDYEFIDSVLKASKIISQRNFKPPLIVLIQDHGQLVKDIPQDTLIYDELLEKGQKDFKISMPRNECDPISVNYTSGSTGIPKGAVYNHRSVYLNSLATITRFDVNPMLVFLWTVDMFRCNGWCFIWLMPALGGTNICLRNDFSAKDIFEAIHVHKVSVTVAGILPSFKILNKVAELGFDVNIGYGMTETLGPVIGEFVSSLEVEAVLLNHPMVLKVAVVGRYDDDGDECLVESPCAIVKLKDGCSANVEDIIKFCEDQLDAHMVPKSVVFGDLPLNSTGKVQKFVIRENIKSIGWCDSIIKACGL*