AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780037879.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037879.01.T01 MTR_7g451450 95.158 475 12 3 1 469 1 470 0.0 914
MsG0780037879.01.T01 MTR_3g465800 31.308 428 248 12 69 462 55 470 1.19e-57 197
MsG0780037879.01.T01 MTR_3g465800 31.951 410 234 11 85 462 3 399 2.14e-55 190
MsG0780037879.01.T01 MTR_7g072420 30.170 411 246 10 82 462 79 478 1.01e-48 174
MsG0780037879.01.T01 MTR_8g091660 29.095 409 253 10 82 462 79 478 8.52e-45 163
MsG0780037879.01.T01 MTR_4g076100 28.000 425 253 13 86 463 81 499 8.10e-39 147
MsG0780037879.01.T01 MTR_3g118070 33.766 308 159 10 86 370 19 304 1.69e-34 134
MsG0780037879.01.T01 MTR_3g118070 33.766 308 159 10 86 370 76 361 2.96e-34 134
MsG0780037879.01.T01 MTR_4g076100 27.731 357 209 12 149 463 6 355 1.26e-28 116
MsG0780037879.01.T01 MTR_8g007510 43.750 112 55 4 1 107 1 109 1.07e-16 76.3
MsG0780037879.01.T01 MTR_4g128620 23.773 387 201 15 144 441 416 797 8.10e-14 74.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037879.01.T01 AT1G80600 75.750 400 97 0 67 466 58 457 0.0 647
MsG0780037879.01.T01 AT4G39660 28.051 467 275 8 30 465 40 476 1.84e-49 176
MsG0780037879.01.T01 AT5G46180 29.167 408 273 7 69 464 42 445 2.33e-49 176
MsG0780037879.01.T01 AT2G38400 30.732 410 240 11 84 462 78 474 2.42e-48 173
MsG0780037879.01.T01 AT2G38400 31.658 398 228 11 84 450 78 462 3.54e-47 170
MsG0780037879.01.T01 AT4G39660 29.529 403 247 6 91 465 8 401 7.74e-47 167
MsG0780037879.01.T01 AT3G08860 29.070 430 259 13 67 462 61 478 4.74e-46 167
MsG0780037879.01.T01 AT3G08860 29.880 415 245 13 67 447 61 463 5.72e-44 161
MsG0780037879.01.T01 AT3G22200 28.037 428 248 13 86 462 70 488 3.40e-40 151
MsG0780037879.01.T01 AT3G22200 28.037 428 248 13 86 462 79 497 3.64e-40 151
MsG0780037879.01.T01 AT3G48730 30.530 321 173 12 86 379 80 377 3.08e-33 131
MsG0780037879.01.T01 AT5G63570 29.688 320 177 10 86 379 19 316 1.55e-30 122
MsG0780037879.01.T01 AT5G63570 30.293 307 169 9 86 369 82 366 2.93e-30 123
MsG0780037879.01.T01 AT5G57590 23.385 449 236 19 92 441 367 806 1.24e-14 77.0

Find 127 sgRNAs with CRISPR-Local

Find 371 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGCTCCAACATCTACTTTA+AGG 0.107418 7:-35666175 None:intergenic
TGGCTGCTGTGTGGGGAATT+AGG 0.150848 7:-35665999 None:intergenic
AGAACTACTAAAACAGAAAT+TGG 0.176104 7:+35671111 MsG0780037879.01.T01:CDS
GGCTGCTGTGTGGGGAATTA+GGG 0.199431 7:-35665998 None:intergenic
CTTTGGGCTCACGAGGCTTT+TGG 0.210358 7:+35670866 MsG0780037879.01.T01:CDS
CGCGGTGTGGGGTTAATTAT+AGG 0.232489 7:+35671160 MsG0780037879.01.T01:CDS
TGCATTTCCATACTCTAAAA+AGG 0.238677 7:-35669890 None:intergenic
TAGGTAGATCAGGATTTCTT+TGG 0.249427 7:+35670849 MsG0780037879.01.T01:CDS
ATCTGAAGTGTAATAATAAC+TGG 0.268363 7:+35671570 MsG0780037879.01.T01:three_prime_UTR
CATCTAAAACATGCAAAGTT+TGG 0.287499 7:-35671336 None:intergenic
TGTTGAAGGGAATGAGTATT+TGG 0.291665 7:+35666331 MsG0780037879.01.T01:CDS
GTAGACGCTTGCCGAAATTC+TGG 0.294134 7:+35671214 MsG0780037879.01.T01:CDS
GTTAATTATAGGAATTGATT+TGG 0.299314 7:+35671171 MsG0780037879.01.T01:CDS
CGAAATGCTTGTGATGAAAC+TGG 0.307803 7:+35670024 MsG0780037879.01.T01:CDS
TTGTAGGTTCAATGTGGTTT+AGG 0.327079 7:+35670830 MsG0780037879.01.T01:intron
GTCGCTTCGGCTATAAATTA+TGG 0.331403 7:+35670968 MsG0780037879.01.T01:CDS
GATCGAGGATAGTGAAGAAT+TGG 0.344140 7:-35666131 None:intergenic
AGGTAGATCAGGATTTCTTT+GGG 0.352648 7:+35670850 MsG0780037879.01.T01:CDS
TATAGCCGAAGCGACTTTCT+CGG 0.364347 7:-35670960 None:intergenic
CTGGAAAAGGTAATGTTGTT+AGG 0.365988 7:+35671254 MsG0780037879.01.T01:CDS
ATCGAGGATAGTGAAGAATT+GGG 0.373850 7:-35666130 None:intergenic
TTTGGCAAGTGTCATTATAT+CGG 0.381895 7:-35670897 None:intergenic
TGCTCCAACATCTACTTTAA+GGG 0.386778 7:-35666174 None:intergenic
CAATGTGGTTTAGGTAGATC+AGG 0.393669 7:+35670839 MsG0780037879.01.T01:CDS
TGTTTGTTTGGCTGCTGTGT+GGG 0.393979 7:-35666007 None:intergenic
TCGACATTGTTGTGTTTGTT+TGG 0.397081 7:-35666019 None:intergenic
ATACGAGAAGGCCAGAATTT+CGG 0.398348 7:-35671225 None:intergenic
CTTGCTGGAGGCCTACCTAT+TGG 0.400108 7:+35670923 MsG0780037879.01.T01:CDS
ACACTTGCCAAACCTCTTGC+TGG 0.401411 7:+35670908 MsG0780037879.01.T01:CDS
GTCAGATAGGAAAGTAGGTT+TGG 0.403141 7:-35671062 None:intergenic
TTGGCAAGTGTCATTATATC+GGG 0.403382 7:-35670896 None:intergenic
CGCTGTAGAGTTAATTCAGC+AGG 0.404452 7:+35669918 MsG0780037879.01.T01:CDS
AATAGCTGCTTCATTTGCTT+CGG 0.404945 7:-35669701 None:intergenic
ACCATTGATTATAACAGAAC+AGG 0.410210 7:+35671285 MsG0780037879.01.T01:CDS
TTCCCTTTCTCAAGCACAAT+CGG 0.410612 7:-35666290 None:intergenic
AAGGTTACTCCAGGCATAAC+AGG 0.413862 7:-35669871 None:intergenic
TCCTGTTCTGTTATAATCAA+TGG 0.426804 7:-35671286 None:intergenic
CTTTCTTTGATACGTCAGAT+AGG 0.429945 7:-35671075 None:intergenic
TCCTCCTCTACAATTGCGTT+TGG 0.435150 7:-35666197 None:intergenic
CTATCTGACGTATCAAAGAA+AGG 0.444915 7:+35671076 MsG0780037879.01.T01:CDS
GTTACGAGGACGGATCCAAT+AGG 0.455130 7:-35670938 None:intergenic
ATAAGTACCCACTATGTACT+TGG 0.457777 7:-35666258 None:intergenic
AGACTGTAGAAATTCTTTAG+TGG 0.459904 7:-35669998 None:intergenic
TTGGTCATGGTGATGATGAT+TGG 0.462669 7:+35666384 MsG0780037879.01.T01:CDS
GCACCGATTGTGCTTGAGAA+AGG 0.463246 7:+35666287 MsG0780037879.01.T01:CDS
TGCTTCCATGGGAGAACCCT+GGG 0.463427 7:+35669802 MsG0780037879.01.T01:CDS
GGCCTTCTCGTATTGACAGC+TGG 0.463785 7:+35671235 MsG0780037879.01.T01:CDS
GAAATGGGTGAGTTTGTTGT+TGG 0.468980 7:-35666075 None:intergenic
AGATGCCAATAATTAAAAGT+AGG 0.469072 7:+35671354 MsG0780037879.01.T01:exon
AAAGCTGTTGTTGATCAAGC+TGG 0.473890 7:+35666410 MsG0780037879.01.T01:CDS
GATACGTCAGATAGGAAAGT+AGG 0.474157 7:-35671067 None:intergenic
CTCGTATTGACAGCTGGAAA+AGG 0.480126 7:+35671241 MsG0780037879.01.T01:CDS
TAGGCCTCCAGCAAGAGGTT+TGG 0.481587 7:-35670915 None:intergenic
TATTTATCACTCTCTTCCTC+AGG 0.482900 7:+35666454 MsG0780037879.01.T01:CDS
GGATGTGTCAGCGACACCTT+TGG 0.484892 7:+35671192 MsG0780037879.01.T01:CDS
GAACTACTAAAACAGAAATT+GGG 0.486287 7:+35671112 MsG0780037879.01.T01:CDS
GTGAAAGAGATTCGCGGTGT+GGG 0.493187 7:+35671148 MsG0780037879.01.T01:CDS
GACTTTCTCGGTTACGAGGA+CGG 0.495041 7:-35670948 None:intergenic
AAAGAGGCTTTCTTTCATGC+TGG 0.504352 7:+35671379 MsG0780037879.01.T01:three_prime_UTR
AACATCTACTTTAAGGGATG+CGG 0.507838 7:-35666168 None:intergenic
CACCGATTGTGCTTGAGAAA+GGG 0.511104 7:+35666288 MsG0780037879.01.T01:CDS
AGAGCAGCATTGCAAATAAG+AGG 0.511606 7:-35671019 None:intergenic
ACTTTAAGGGATGCGGTTGG+TGG 0.512750 7:-35666161 None:intergenic
TAATTAAAAGTAGGAGAAAG+AGG 0.516318 7:+35671363 MsG0780037879.01.T01:exon
TCGTCAAAGCAAGTGCGCCC+AGG 0.517270 7:-35669819 None:intergenic
ATTATTGTATAATAAATAAG+TGG 0.520861 7:+35671484 MsG0780037879.01.T01:three_prime_UTR
CGTCAAAGCAAGTGCGCCCA+GGG 0.521246 7:-35669818 None:intergenic
TGTTGTTTGCAGAAATGTGG+TGG 0.527430 7:-35666043 None:intergenic
CCAGGCATAACAGGTTCAAA+AGG 0.527602 7:-35669862 None:intergenic
AGTTATTATTACACTTCAGA+TGG 0.533797 7:-35671568 None:intergenic
GAGTATTTGGATTGTAGTGG+TGG 0.536009 7:+35666344 MsG0780037879.01.T01:CDS
GTGGAACCTATCCAAGGAGA+AGG 0.537961 7:+35669961 MsG0780037879.01.T01:CDS
TCTTCACTATCCTCGATCAC+TGG 0.542276 7:+35666136 MsG0780037879.01.T01:CDS
TGTAAAGTGTATGATGTTGA+AGG 0.545867 7:+35666317 MsG0780037879.01.T01:CDS
AAGTTGTCATGAAATAATCA+TGG 0.546146 7:+35671402 MsG0780037879.01.T01:three_prime_UTR
GTGCGCCCAGGGTTCTCCCA+TGG 0.549729 7:-35669807 None:intergenic
GCTATAAATTATGGCGACCA+TGG 0.549942 7:+35670977 MsG0780037879.01.T01:CDS
GGCACTTCTTGTGTTTGATG+AGG 0.553270 7:+35670047 MsG0780037879.01.T01:CDS
TGAATTAACTCTACAGCGGC+CGG 0.554420 7:-35669913 None:intergenic
TGGAACCTATCCAAGGAGAA+GGG 0.557559 7:+35669962 MsG0780037879.01.T01:CDS
CGTAACCGAGAAAGTCGCTT+CGG 0.560304 7:+35670955 MsG0780037879.01.T01:CDS
AGGATTTCTTTGGGCTCACG+AGG 0.564109 7:+35670859 MsG0780037879.01.T01:CDS
GCTGTCAATGCACTTGGTCA+TGG 0.564902 7:+35666371 MsG0780037879.01.T01:CDS
TTGTGTTGTTTGCAGAAATG+TGG 0.566796 7:-35666046 None:intergenic
GCATCCCTTAAAGTAGATGT+TGG 0.569300 7:+35666170 MsG0780037879.01.T01:CDS
GAAATGCTTGTGATGAAACT+GGG 0.569562 7:+35670025 MsG0780037879.01.T01:CDS
TGAAGAAGCCAAGTACATAG+TGG 0.571534 7:+35666250 MsG0780037879.01.T01:CDS
TGAAAGAGATTCGCGGTGTG+GGG 0.571664 7:+35671149 MsG0780037879.01.T01:CDS
CAGAAACACACATGTACTGA+CGG 0.573922 7:+35669742 MsG0780037879.01.T01:CDS
TTGCTTCCATGGGAGAACCC+TGG 0.575175 7:+35669801 MsG0780037879.01.T01:CDS
GGGATTGCTGTCAATGCACT+TGG 0.579173 7:+35666365 MsG0780037879.01.T01:CDS
GTGTTTGTTTGGCTGCTGTG+TGG 0.579355 7:-35666008 None:intergenic
CTTTAAGGGATGCGGTTGGT+GGG 0.579518 7:-35666160 None:intergenic
CAGTGTGAAGAAGACTAAAG+AGG 0.586691 7:+35666220 MsG0780037879.01.T01:CDS
AATGAGTATTTGGATTGTAG+TGG 0.589682 7:+35666341 MsG0780037879.01.T01:CDS
TCGAGGATAGTGAAGAATTG+GGG 0.590529 7:-35666129 None:intergenic
GTTTGTTTGGCTGCTGTGTG+GGG 0.591695 7:-35666006 None:intergenic
AGAAACACACATGTACTGAC+GGG 0.595196 7:+35669743 MsG0780037879.01.T01:CDS
CACCTGCAAAAGTACTTCCA+TGG 0.596537 7:-35670994 None:intergenic
AAGCTGTTGTTGATCAAGCT+GGG 0.600000 7:+35666411 MsG0780037879.01.T01:CDS
ATTGTGCTTGAGAAAGGGAA+AGG 0.601270 7:+35666293 MsG0780037879.01.T01:CDS
TTTAGAGTATGGAAATGCAC+CGG 0.604167 7:+35669894 MsG0780037879.01.T01:CDS
TTCCAGCTGTCAATACGAGA+AGG 0.607878 7:-35671237 None:intergenic
CGTGAAAGAGATTCGCGGTG+TGG 0.608209 7:+35671147 MsG0780037879.01.T01:CDS
GTTGTTTGCAGAAATGTGGT+GGG 0.608903 7:-35666042 None:intergenic
AAGCGACTTTCTCGGTTACG+AGG 0.614404 7:-35670952 None:intergenic
CGACACGTGAAAGAGATTCG+CGG 0.614914 7:+35671142 MsG0780037879.01.T01:CDS
ATAGGTAGGCCTCCAGCAAG+AGG 0.618364 7:-35670920 None:intergenic
GAAGAAGCCAAGTACATAGT+GGG 0.622654 7:+35666251 MsG0780037879.01.T01:CDS
TGTTCTGTTATAATCAATGG+TGG 0.622795 7:-35671283 None:intergenic
ACCAAACGCAATTGTAGAGG+AGG 0.624097 7:+35666196 MsG0780037879.01.T01:CDS
AGCACCAAACGCAATTGTAG+AGG 0.630346 7:+35666193 MsG0780037879.01.T01:CDS
GTAAAGTGTATGATGTTGAA+GGG 0.636015 7:+35666318 MsG0780037879.01.T01:CDS
TTTCGGCAAGCGTCTACCAA+AGG 0.636391 7:-35671208 None:intergenic
TCTACTTTAAGGGATGCGGT+TGG 0.636417 7:-35666164 None:intergenic
GGAACCTATCCAAGGAGAAG+GGG 0.639140 7:+35669963 MsG0780037879.01.T01:CDS
CGAGGACGGATCCAATAGGT+AGG 0.641171 7:-35670934 None:intergenic
AGTATTTGGATTGTAGTGGT+GGG 0.647378 7:+35666345 MsG0780037879.01.T01:CDS
GTTGGTGGGACCAGTGATCG+AGG 0.648959 7:-35666146 None:intergenic
GAACCTATCCAAGGAGAAGG+GGG 0.649216 7:+35669964 MsG0780037879.01.T01:CDS
TCTGAAGTGTAATAATAACT+GGG 0.656490 7:+35671571 MsG0780037879.01.T01:three_prime_UTR
CTACTAAAACAGAAATTGGG+CGG 0.661805 7:+35671115 MsG0780037879.01.T01:CDS
CTTGCCAAACCTCTTGCTGG+AGG 0.671134 7:+35670911 MsG0780037879.01.T01:CDS
TGGCAAGTGTCATTATATCG+GGG 0.674684 7:-35670895 None:intergenic
GCTGTAGAGTTAATTCAGCA+GGG 0.678091 7:+35669919 MsG0780037879.01.T01:CDS
AAATGCTTGTGATGAAACTG+GGG 0.711506 7:+35670026 MsG0780037879.01.T01:CDS
CTGCTGAATTAACTCTACAG+CGG 0.733302 7:-35669917 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTGTATAATAAATAAG+TGG + Chr7:35671484-35671503 MsG0780037879.01.T01:three_prime_UTR 10.0%
!!! AATTTTTGTTTAGAAATTTT+AGG + Chr7:35669337-35669356 MsG0780037879.01.T01:intron 10.0%
!! ATTTGTTTGAATTAAGATAA+TGG + Chr7:35666992-35667011 MsG0780037879.01.T01:intron 15.0%
!! GCTAAATATTTAATTAACTT+CGG - Chr7:35668872-35668891 None:intergenic 15.0%
!! TCTTTAATAGTAGAAATAAA+GGG + Chr7:35666560-35666579 MsG0780037879.01.T01:intron 15.0%
!!! AATAAATAAAGGTATATTAG+TGG - Chr7:35670542-35670561 None:intergenic 15.0%
!!! TTTGGATATTTTATTCAAAA+CGG - Chr7:35671047-35671066 None:intergenic 15.0%
!!! TTTTTTTTCCTAATTTTTCA+GGG + Chr7:35666494-35666513 MsG0780037879.01.T01:intron 15.0%
!! AAGTAAATCAGAAAATGAAA+TGG + Chr7:35670277-35670296 MsG0780037879.01.T01:intron 20.0%
!! AATACACTTCAAAATTATGT+AGG - Chr7:35670735-35670754 None:intergenic 20.0%
!! ACAAATTATTGCTTCATAAT+TGG - Chr7:35668015-35668034 None:intergenic 20.0%
!! AGTTGTTTATTGTAGATAAT+TGG + Chr7:35667056-35667075 MsG0780037879.01.T01:intron 20.0%
!! ATATTTGCAATTGTTTCATT+TGG + Chr7:35670766-35670785 MsG0780037879.01.T01:intron 20.0%
!! CATGTTATTATTTGATAAAG+CGG + Chr7:35668712-35668731 MsG0780037879.01.T01:intron 20.0%
!! CTTTAATAGTAGAAATAAAG+GGG + Chr7:35666561-35666580 MsG0780037879.01.T01:intron 20.0%
!! GTCTTTAATAGTAGAAATAA+AGG + Chr7:35666559-35666578 MsG0780037879.01.T01:intron 20.0%
!! GTTAATTATAGGAATTGATT+TGG + Chr7:35671171-35671190 MsG0780037879.01.T01:CDS 20.0%
!! TAAAATTTACATACATGACA+TGG - Chr7:35670129-35670148 None:intergenic 20.0%
!! TCACATAAAATTATATGTGT+CGG + Chr7:35666674-35666693 MsG0780037879.01.T01:intron 20.0%
!! TTCTTTGTATTTCCATTTAT+CGG + Chr7:35669423-35669442 MsG0780037879.01.T01:intron 20.0%
!! TTTCTGATTTACTTAATAGT+GGG - Chr7:35670271-35670290 None:intergenic 20.0%
!!! AATTATTTTAAGGTTAGCAA+TGG + Chr7:35667342-35667361 MsG0780037879.01.T01:intron 20.0%
!!! AGTATTATTTTACTGACTTT+TGG + Chr7:35667446-35667465 MsG0780037879.01.T01:intron 20.0%
!!! ATGTTTTGTTTTGATGATTT+TGG - Chr7:35665953-35665972 None:intergenic 20.0%
!!! CTTTTTTTTCCTAATTTTTC+AGG + Chr7:35666493-35666512 MsG0780037879.01.T01:intron 20.0%
!!! GTCTGTGTATAATTATTTTA+AGG + Chr7:35667332-35667351 MsG0780037879.01.T01:intron 20.0%
!!! TCATTTCTATATGATTTTGT+AGG + Chr7:35670814-35670833 MsG0780037879.01.T01:intron 20.0%
!!! TTTCTCCTACTTTTAATTAT+TGG - Chr7:35671362-35671381 None:intergenic 20.0%
!!! TTTTCTGATTTACTTAATAG+TGG - Chr7:35670272-35670291 None:intergenic 20.0%
!!! TTTTGTTTAGAAATTTTAGG+TGG + Chr7:35669340-35669359 MsG0780037879.01.T01:intron 20.0%
! AAATCAGAAAATGAAATGGT+TGG + Chr7:35670281-35670300 MsG0780037879.01.T01:intron 25.0%
! AAATTGTCAGAAAAATAAGG+TGG + Chr7:35669179-35669198 MsG0780037879.01.T01:intron 25.0%
! AAGTTGTCATGAAATAATCA+TGG + Chr7:35671402-35671421 MsG0780037879.01.T01:three_prime_UTR 25.0%
! AATTTCTGAGTTCATATCTT+GGG + Chr7:35669536-35669555 MsG0780037879.01.T01:intron 25.0%
! AGAACTACTAAAACAGAAAT+TGG + Chr7:35671111-35671130 MsG0780037879.01.T01:CDS 25.0%
! AGATGCCAATAATTAAAAGT+AGG + Chr7:35671354-35671373 MsG0780037879.01.T01:exon 25.0%
! AGTTATTATTACACTTCAGA+TGG - Chr7:35671571-35671590 None:intergenic 25.0%
! ATTGCTAAAAGCTAAAAACT+CGG - Chr7:35669782-35669801 None:intergenic 25.0%
! ATTTGCAAAAAATACACGAT+CGG - Chr7:35669674-35669693 None:intergenic 25.0%
! CTAAAAAACCCTGAAAAATT+AGG - Chr7:35666505-35666524 None:intergenic 25.0%
! CTTAAACAAGACTTAATATG+AGG + Chr7:35670690-35670709 MsG0780037879.01.T01:intron 25.0%
! GAACTACTAAAACAGAAATT+GGG + Chr7:35671112-35671131 MsG0780037879.01.T01:CDS 25.0%
! TAATTAAAAGTAGGAGAAAG+AGG + Chr7:35671363-35671382 MsG0780037879.01.T01:exon 25.0%
! TAATTTCTGAGTTCATATCT+TGG + Chr7:35669535-35669554 MsG0780037879.01.T01:intron 25.0%
! TACCCTTTATTAATAGTACT+CGG - Chr7:35670598-35670617 None:intergenic 25.0%
! TCATTATGATCATTGAAAGA+TGG + Chr7:35668560-35668579 MsG0780037879.01.T01:intron 25.0%
! TTTAACAGCATCAAATGTAA+TGG - Chr7:35667979-35667998 None:intergenic 25.0%
! TTTAGATATAATTCGTGTTG+TGG + Chr7:35666912-35666931 MsG0780037879.01.T01:intron 25.0%
!! AGACATTGAAGCATTTAATA+TGG + Chr7:35668613-35668632 MsG0780037879.01.T01:intron 25.0%
!! ATAGTTTTTCTTCCGATAAA+TGG - Chr7:35669438-35669457 None:intergenic 25.0%
!! ATCTGAAGTGTAATAATAAC+TGG + Chr7:35671570-35671589 MsG0780037879.01.T01:three_prime_UTR 25.0%
!! ATGAAATTGAAAGCTCTAAT+AGG + Chr7:35669251-35669270 MsG0780037879.01.T01:intron 25.0%
!! TACCTTAAAAGTCTTTTTGA+AGG + Chr7:35667471-35667490 MsG0780037879.01.T01:intron 25.0%
!! TAGAAGTTGGTTAATATGTT+GGG + Chr7:35669101-35669120 MsG0780037879.01.T01:intron 25.0%
!! TCACATTTAAAACTTGGAAA+AGG - Chr7:35668130-35668149 None:intergenic 25.0%
!! TCTGAAGTGTAATAATAACT+GGG + Chr7:35671571-35671590 MsG0780037879.01.T01:three_prime_UTR 25.0%
!! TGATTTTCTCAAATCATTAG+TGG - Chr7:35666657-35666676 None:intergenic 25.0%
!! TGCGCTTAAATTTTGTTAAA+AGG + Chr7:35667512-35667531 MsG0780037879.01.T01:intron 25.0%
!! TTCCTTCAAAAAGACTTTTA+AGG - Chr7:35667476-35667495 None:intergenic 25.0%
!! TTTAAAGTTATTAGCTGTGT+CGG + Chr7:35668417-35668436 MsG0780037879.01.T01:intron 25.0%
!!! ACTATTAATAAAGGGTACTT+TGG + Chr7:35670601-35670620 MsG0780037879.01.T01:intron 25.0%
!!! CTCATATTAAGTCTTGTTTA+AGG - Chr7:35670692-35670711 None:intergenic 25.0%
!!! GTGAACTTTTTTAGAAAATC+AGG + Chr7:35667254-35667273 MsG0780037879.01.T01:intron 25.0%
!!! GTTTTAAGAATATTGTTGCA+AGG + Chr7:35671452-35671471 MsG0780037879.01.T01:three_prime_UTR 25.0%
!!! TAAAAGTCTTTTTGAAGGAA+CGG + Chr7:35667476-35667495 MsG0780037879.01.T01:intron 25.0%
!!! TTTCCAAGTTTTAAATGTGA+TGG + Chr7:35668130-35668149 MsG0780037879.01.T01:intron 25.0%
AAAAACTATAGTGCGGAAAA+AGG + Chr7:35669449-35669468 MsG0780037879.01.T01:intron 30.0%
AAACAAGACTTAATATGAGG+TGG + Chr7:35670693-35670712 MsG0780037879.01.T01:intron 30.0%
AATAGTAGAAATAAAGGGGA+TGG + Chr7:35666565-35666584 MsG0780037879.01.T01:intron 30.0%
AATCAGTGTATGCAATTATG+AGG + Chr7:35668155-35668174 MsG0780037879.01.T01:intron 30.0%
AATGAGTATTTGGATTGTAG+TGG + Chr7:35666341-35666360 MsG0780037879.01.T01:CDS 30.0%
AATTCTGGATGTCATAAGAA+TGG + Chr7:35668778-35668797 MsG0780037879.01.T01:intron 30.0%
ACACCGAGTACTATTAATAA+AGG + Chr7:35670592-35670611 MsG0780037879.01.T01:intron 30.0%
ACTCGAGACACAATAAATAA+AGG - Chr7:35670553-35670572 None:intergenic 30.0%
AGAAAGGAGTTTAATTGTTG+TGG + Chr7:35667023-35667042 MsG0780037879.01.T01:intron 30.0%
AGACTGTAGAAATTCTTTAG+TGG - Chr7:35670001-35670020 None:intergenic 30.0%
AGTATCAGTGTATGCAATTA+TGG + Chr7:35668064-35668083 MsG0780037879.01.T01:intron 30.0%
ATAATGCTTCGGATTGAATA+AGG + Chr7:35668936-35668955 MsG0780037879.01.T01:intron 30.0%
ATAATTCGTGTTGTGGTATT+TGG + Chr7:35666919-35666938 MsG0780037879.01.T01:intron 30.0%
ATAGAAGTTAGTACACTCAA+TGG + Chr7:35670644-35670663 MsG0780037879.01.T01:intron 30.0%
ATATTTAGCGAACAGCAAAA+AGG - Chr7:35667092-35667111 None:intergenic 30.0%
ATCATTGAAAGATGGTGATA+CGG + Chr7:35668568-35668587 MsG0780037879.01.T01:intron 30.0%
CACCGAGTACTATTAATAAA+GGG + Chr7:35670593-35670612 MsG0780037879.01.T01:intron 30.0%
CATATTGTTATGATTACCTG+AGG - Chr7:35666473-35666492 None:intergenic 30.0%
CTAACAACAGCATATACTTA+CGG - Chr7:35668190-35668209 None:intergenic 30.0%
GAAAAAAGAAAGAGAGGAAA+GGG + Chr7:35667221-35667240 MsG0780037879.01.T01:intron 30.0%
GAAATTATCTTCTGTTCTGA+AGG + Chr7:35669290-35669309 MsG0780037879.01.T01:intron 30.0%
GGGAAATTGTCAGAAAAATA+AGG + Chr7:35669176-35669195 MsG0780037879.01.T01:intron 30.0%
GTAAAGTGTATGATGTTGAA+GGG + Chr7:35666318-35666337 MsG0780037879.01.T01:CDS 30.0%
GTAAGAAAGAGAGATAGAAA+GGG + Chr7:35667149-35667168 MsG0780037879.01.T01:intron 30.0%
GTATCAGTGTATGCAATTAT+GGG + Chr7:35668065-35668084 MsG0780037879.01.T01:intron 30.0%
GTCATCTCAATTTGACAAAA+AGG - Chr7:35668996-35669015 None:intergenic 30.0%
GTGTATAATCTCAAATGAAG+AGG + Chr7:35668685-35668704 MsG0780037879.01.T01:intron 30.0%
TAAAGTATAGGTAGTGAAGT+AGG + Chr7:35668828-35668847 MsG0780037879.01.T01:intron 30.0%
TAATTCGTGTTGTGGTATTT+GGG + Chr7:35666920-35666939 MsG0780037879.01.T01:intron 30.0%
TATAATCTCAAATGAAGAGG+TGG + Chr7:35668688-35668707 MsG0780037879.01.T01:intron 30.0%
TATCAGTGTATGCAATTATG+GGG + Chr7:35668066-35668085 MsG0780037879.01.T01:intron 30.0%
TATGCCTGTTAAAAGAAAGA+TGG - Chr7:35670792-35670811 None:intergenic 30.0%
TCCTGTTCTGTTATAATCAA+TGG - Chr7:35671289-35671308 None:intergenic 30.0%
TCTCCAAAATTAGAACAATG+AGG - Chr7:35668100-35668119 None:intergenic 30.0%
TGAAAAAGTGAGAATGTGAT+GGG + Chr7:35667188-35667207 MsG0780037879.01.T01:intron 30.0%
TGTAAAGTGTATGATGTTGA+AGG + Chr7:35666317-35666336 MsG0780037879.01.T01:CDS 30.0%
TGTAAGAAAGAGAGATAGAA+AGG + Chr7:35667148-35667167 MsG0780037879.01.T01:intron 30.0%
TGTTCTGTTATAATCAATGG+TGG - Chr7:35671286-35671305 None:intergenic 30.0%
TTGTTTCATGAAGGTTATTG+AGG + Chr7:35668741-35668760 MsG0780037879.01.T01:intron 30.0%
! AACGTAATTTGCACTATGTT+TGG - Chr7:35667924-35667943 None:intergenic 30.0%
! AATCCGAAGCATTATTAGAT+GGG - Chr7:35668931-35668950 None:intergenic 30.0%
! AATTTGTTTAGAACTGATGC+AGG + Chr7:35669612-35669631 MsG0780037879.01.T01:intron 30.0%
! ACCATTGATTATAACAGAAC+AGG + Chr7:35671285-35671304 MsG0780037879.01.T01:CDS 30.0%
! ACGTAATTTGCACTATGTTT+GGG - Chr7:35667923-35667942 None:intergenic 30.0%
! ATGATTTTGTAGGTTCAATG+TGG + Chr7:35670824-35670843 MsG0780037879.01.T01:intron 30.0%
! CATCTAAAACATGCAAAGTT+TGG - Chr7:35671339-35671358 None:intergenic 30.0%
! GTAGAAGTTGGTTAATATGT+TGG + Chr7:35669100-35669119 MsG0780037879.01.T01:intron 30.0%
! GTTGTTGTTGTTGTTGAAAT+GGG - Chr7:35666093-35666112 None:intergenic 30.0%
! TGAATGCCTCAATTTTGTAT+CGG + Chr7:35666799-35666818 MsG0780037879.01.T01:intron 30.0%
! TGCATTTCCATACTCTAAAA+AGG - Chr7:35669893-35669912 None:intergenic 30.0%
! TGCTAGATTCTTTCTGTTTT+TGG + Chr7:35666525-35666544 MsG0780037879.01.T01:intron 30.0%
! TGTCCATCACATTTAAAACT+TGG - Chr7:35668136-35668155 None:intergenic 30.0%
! TGTGTTGATACTAATTTGCA+GGG + Chr7:35667416-35667435 MsG0780037879.01.T01:intron 30.0%
! TGTTGTTGTTGTTGTTGAAA+TGG - Chr7:35666094-35666113 None:intergenic 30.0%
! TTCAGTGTAATTAGAAGTGT+CGG - Chr7:35668386-35668405 None:intergenic 30.0%
! TTGTGTTGATACTAATTTGC+AGG + Chr7:35667415-35667434 MsG0780037879.01.T01:intron 30.0%
! TTTGGCAAGTGTCATTATAT+CGG - Chr7:35670900-35670919 None:intergenic 30.0%
! TTTTATGTCAGAAATGCATG+TGG + Chr7:35671537-35671556 MsG0780037879.01.T01:three_prime_UTR 30.0%
!! CTGATTCCTTCTAAAATTAG+GGG - Chr7:35668250-35668269 None:intergenic 30.0%
!! GACCTAAAATTAACTTGCAT+TGG - Chr7:35669054-35669073 None:intergenic 30.0%
!! GCTGATTCCTTCTAAAATTA+GGG - Chr7:35668251-35668270 None:intergenic 30.0%
!! TGTGTGTTTCTGATATTTTC+TGG - Chr7:35669734-35669753 None:intergenic 30.0%
!!! CGTGTATTTTTTGCAAATTC+TGG + Chr7:35669676-35669695 MsG0780037879.01.T01:CDS 30.0%
AAACTCGCTTCTTTGTTCAT+TGG + Chr7:35669076-35669095 MsG0780037879.01.T01:intron 35.0%
AAATGCTTGTGATGAAACTG+GGG + Chr7:35670026-35670045 MsG0780037879.01.T01:CDS 35.0%
AACTCGCTTCTTTGTTCATT+GGG + Chr7:35669077-35669096 MsG0780037879.01.T01:intron 35.0%
AAGACTTAATATGAGGTGGA+GGG + Chr7:35670697-35670716 MsG0780037879.01.T01:intron 35.0%
AAGCAGATAAAAGACTTGAG+TGG - Chr7:35670414-35670433 None:intergenic 35.0%
AATAGCTGCTTCATTTGCTT+CGG - Chr7:35669704-35669723 None:intergenic 35.0%
AGGCTTATTAAGAATCTCTG+TGG + Chr7:35669469-35669488 MsG0780037879.01.T01:intron 35.0%
AGGTAGATCAGGATTTCTTT+GGG + Chr7:35670850-35670869 MsG0780037879.01.T01:CDS 35.0%
AGGTATGCATCATCTAATCT+TGG + Chr7:35670067-35670086 MsG0780037879.01.T01:intron 35.0%
AGTATTTGGATTGTAGTGGT+GGG + Chr7:35666345-35666364 MsG0780037879.01.T01:CDS 35.0%
ATAAGTACCCACTATGTACT+TGG - Chr7:35666261-35666280 None:intergenic 35.0%
ATCGAGGATAGTGAAGAATT+GGG - Chr7:35666133-35666152 None:intergenic 35.0%
ATGCCCATCTAATAATGCTT+CGG + Chr7:35668925-35668944 MsG0780037879.01.T01:intron 35.0%
ATGGTACAAAGAAGATGGAA+GGG + Chr7:35669155-35669174 MsG0780037879.01.T01:intron 35.0%
ATTGAGATCTACCGTCATAA+AGG - Chr7:35668227-35668246 None:intergenic 35.0%
CATCATCTAATCTTGGTATC+TGG + Chr7:35670074-35670093 MsG0780037879.01.T01:intron 35.0%
CTACTAAAACAGAAATTGGG+CGG + Chr7:35671115-35671134 MsG0780037879.01.T01:CDS 35.0%
CTATCTGACGTATCAAAGAA+AGG + Chr7:35671076-35671095 MsG0780037879.01.T01:CDS 35.0%
CTGGAAAAGGTAATGTTGTT+AGG + Chr7:35671254-35671273 MsG0780037879.01.T01:CDS 35.0%
CTTTCTTTGATACGTCAGAT+AGG - Chr7:35671078-35671097 None:intergenic 35.0%
GAAATGCTTGTGATGAAACT+GGG + Chr7:35670025-35670044 MsG0780037879.01.T01:CDS 35.0%
GAAGTAGAGATAACAGAACT+TGG - Chr7:35669402-35669421 None:intergenic 35.0%
GGAAAAAAGAAAGAGAGGAA+AGG + Chr7:35667220-35667239 MsG0780037879.01.T01:intron 35.0%
GTCAGAAAAATAAGGTGGAA+GGG + Chr7:35669184-35669203 MsG0780037879.01.T01:intron 35.0%
GTCTGCATATGATTGAATTC+TGG + Chr7:35668763-35668782 MsG0780037879.01.T01:intron 35.0%
GTGAAAAAGTGAGAATGTGA+TGG + Chr7:35667187-35667206 MsG0780037879.01.T01:intron 35.0%
GTTGGTTAATATGTTGGGTA+AGG + Chr7:35669106-35669125 MsG0780037879.01.T01:intron 35.0%
TAGGTAGATCAGGATTTCTT+TGG + Chr7:35670849-35670868 MsG0780037879.01.T01:CDS 35.0%
TATGGTACAAAGAAGATGGA+AGG + Chr7:35669154-35669173 MsG0780037879.01.T01:intron 35.0%
TATGTTGGGTAAGGATGATA+AGG + Chr7:35669115-35669134 MsG0780037879.01.T01:intron 35.0%
TATTTATCACTCTCTTCCTC+AGG + Chr7:35666454-35666473 MsG0780037879.01.T01:CDS 35.0%
TCAGAAAAATAAGGTGGAAG+GGG + Chr7:35669185-35669204 MsG0780037879.01.T01:intron 35.0%
TCGACATTGTTGTGTTTGTT+TGG - Chr7:35666022-35666041 None:intergenic 35.0%
TCGGAAGAAAAACTATAGTG+CGG + Chr7:35669442-35669461 MsG0780037879.01.T01:intron 35.0%
TGCTCCAACATCTACTTTAA+GGG - Chr7:35666177-35666196 None:intergenic 35.0%
TGTAAAACTTCAGTAGTGAG+AGG + Chr7:35667888-35667907 MsG0780037879.01.T01:intron 35.0%
TGTCAGAAAAATAAGGTGGA+AGG + Chr7:35669183-35669202 MsG0780037879.01.T01:intron 35.0%
TGTTGAAGGGAATGAGTATT+TGG + Chr7:35666331-35666350 MsG0780037879.01.T01:CDS 35.0%
TTAGCTGCCACTGTAAAATA+TGG + Chr7:35669218-35669237 MsG0780037879.01.T01:intron 35.0%
TTCCATCTTCTTTGTACCAT+AGG - Chr7:35669155-35669174 None:intergenic 35.0%
TTGAGATCTACCGTCATAAA+GGG - Chr7:35668226-35668245 None:intergenic 35.0%
TTGTAGGTTCAATGTGGTTT+AGG + Chr7:35670830-35670849 MsG0780037879.01.T01:intron 35.0%
TTTGCATATGTAACCAAAGC+AGG + Chr7:35670169-35670188 MsG0780037879.01.T01:intron 35.0%
! AACATCTACTTTAAGGGATG+CGG - Chr7:35666171-35666190 None:intergenic 35.0%
! ACTTGTTTAAAGTCAGAGTG+TGG - Chr7:35667949-35667968 None:intergenic 35.0%
! CAATCCGAAGCATTATTAGA+TGG - Chr7:35668932-35668951 None:intergenic 35.0%
! CCATTTTCTCGAAATGTTAC+CGG - Chr7:35666762-35666781 None:intergenic 35.0%
! CGCCAATGCAAGTTAATTTT+AGG + Chr7:35669049-35669068 MsG0780037879.01.T01:intron 35.0%
! CTCAATCCCCTAATTTTAGA+AGG + Chr7:35668241-35668260 MsG0780037879.01.T01:intron 35.0%
! CTTTTAGCAATTGCTTCCAT+GGG + Chr7:35669791-35669810 MsG0780037879.01.T01:CDS 35.0%
! GATAATGGCTTGTCTTAGAA+AGG + Chr7:35667007-35667026 MsG0780037879.01.T01:intron 35.0%
! GCATTTAATATGGTTTGCAG+AGG + Chr7:35668623-35668642 MsG0780037879.01.T01:intron 35.0%
! GGTACTTTTAGATAGACCTA+TGG + Chr7:35669136-35669155 MsG0780037879.01.T01:intron 35.0%
! GTGCCTCATTGTTCTAATTT+TGG + Chr7:35668094-35668113 MsG0780037879.01.T01:intron 35.0%
! TACTCTAAAAAGGTTACTCC+AGG - Chr7:35669883-35669902 None:intergenic 35.0%
! TGCTTCTCCATATTTTACAG+TGG - Chr7:35669228-35669247 None:intergenic 35.0%
! TTGGCAAGTGTCATTATATC+GGG - Chr7:35670899-35670918 None:intergenic 35.0%
! TTGGCCATCTTTCTTTTAAC+AGG + Chr7:35670785-35670804 MsG0780037879.01.T01:intron 35.0%
! TTTAGAGTATGGAAATGCAC+CGG + Chr7:35669894-35669913 MsG0780037879.01.T01:CDS 35.0%
!! GGCTGATTCCTTCTAAAATT+AGG - Chr7:35668252-35668271 None:intergenic 35.0%
!! TTGTGTTGTTTGCAGAAATG+TGG - Chr7:35666049-35666068 None:intergenic 35.0%
!!! GGAGTAACCTTTTTAGAGTA+TGG + Chr7:35669883-35669902 MsG0780037879.01.T01:CDS 35.0%
AAAGAGGCTTTCTTTCATGC+TGG + Chr7:35671379-35671398 MsG0780037879.01.T01:three_prime_UTR 40.0%
AAAGCTAAAAACTCGGTAGC+TGG - Chr7:35669775-35669794 None:intergenic 40.0%
AAAGCTGTTGTTGATCAAGC+TGG + Chr7:35666410-35666429 MsG0780037879.01.T01:CDS 40.0%
AAGCTGTTGTTGATCAAGCT+GGG + Chr7:35666411-35666430 MsG0780037879.01.T01:CDS 40.0%
AAGGTTAGCAATGGTATGTG+TGG + Chr7:35667351-35667370 MsG0780037879.01.T01:intron 40.0%
AATGGTATGTGTGGTTGGAA+AGG + Chr7:35667360-35667379 MsG0780037879.01.T01:intron 40.0%
ACACAAGATGCTGTCTAAAG+AGG - Chr7:35667401-35667420 None:intergenic 40.0%
ACACTCATAGTGTTAGACAC+TGG + Chr7:35666828-35666847 MsG0780037879.01.T01:intron 40.0%
ACTCGCTTCTTTGTTCATTG+GGG + Chr7:35669078-35669097 MsG0780037879.01.T01:intron 40.0%
ACTTCAGATTGAAGACGTGT+TGG - Chr7:35666856-35666875 None:intergenic 40.0%
AGAGCAGCATTGCAAATAAG+AGG - Chr7:35671022-35671041 None:intergenic 40.0%
AGGAATCAGCCAATGTTAAG+TGG + Chr7:35668261-35668280 MsG0780037879.01.T01:intron 40.0%
ATACGAGAAGGCCAGAATTT+CGG - Chr7:35671228-35671247 None:intergenic 40.0%
ATATTGATCTTCCAGACCTC+TGG - Chr7:35668652-35668671 None:intergenic 40.0%
ATGAAACATGGATACGGACA+CGG - Chr7:35668467-35668486 None:intergenic 40.0%
ATGCTGTTAAAAGAGAGCCA+GGG + Chr7:35667988-35668007 MsG0780037879.01.T01:intron 40.0%
ATGGTATGTGTGGTTGGAAA+GGG + Chr7:35667361-35667380 MsG0780037879.01.T01:intron 40.0%
ATGTATAGAACTTTCTCCGC+TGG - Chr7:35669020-35669039 None:intergenic 40.0%
ATTGCTTCATAATTGGACCC+TGG - Chr7:35668008-35668027 None:intergenic 40.0%
ATTGTGCTTGAGAAAGGGAA+AGG + Chr7:35666293-35666312 MsG0780037879.01.T01:CDS 40.0%
ATTTGCTCTGCAGTGAAACT+CGG + Chr7:35667783-35667802 MsG0780037879.01.T01:intron 40.0%
CAAGACTTAATATGAGGTGG+AGG + Chr7:35670696-35670715 MsG0780037879.01.T01:intron 40.0%
CAATGTGGTTTAGGTAGATC+AGG + Chr7:35670839-35670858 MsG0780037879.01.T01:CDS 40.0%
CAGAAACACACATGTACTGA+CGG + Chr7:35669742-35669761 MsG0780037879.01.T01:CDS 40.0%
CAGTGTGAAGAAGACTAAAG+AGG + Chr7:35666220-35666239 MsG0780037879.01.T01:CDS 40.0%
CATTGACACTAGACTCAACA+CGG + Chr7:35666601-35666620 MsG0780037879.01.T01:intron 40.0%
CCAACACCGATACAAAATTG+AGG - Chr7:35666808-35666827 None:intergenic 40.0%
CCGGTAACATTTCGAGAAAA+TGG + Chr7:35666759-35666778 MsG0780037879.01.T01:intron 40.0%
CGAAATGCTTGTGATGAAAC+TGG + Chr7:35670024-35670043 MsG0780037879.01.T01:CDS 40.0%
CGATGTCGATGGTAAAGTAT+AGG + Chr7:35668816-35668835 MsG0780037879.01.T01:intron 40.0%
CTCCCTATGAAACATGGATA+CGG - Chr7:35668473-35668492 None:intergenic 40.0%
CTCTATCTCCCTATGAAACA+TGG - Chr7:35668479-35668498 None:intergenic 40.0%
GAAGAAGCCAAGTACATAGT+GGG + Chr7:35666251-35666270 MsG0780037879.01.T01:CDS 40.0%
GACATGGTGTACTCATTTAC+TGG - Chr7:35670113-35670132 None:intergenic 40.0%
GACCTATGGTACAAAGAAGA+TGG + Chr7:35669150-35669169 MsG0780037879.01.T01:intron 40.0%
GAGTATTTGGATTGTAGTGG+TGG + Chr7:35666344-35666363 MsG0780037879.01.T01:CDS 40.0%
GATACGTCAGATAGGAAAGT+AGG - Chr7:35671070-35671089 None:intergenic 40.0%
GATCGAGGATAGTGAAGAAT+TGG - Chr7:35666134-35666153 None:intergenic 40.0%
GCATCCCTTAAAGTAGATGT+TGG + Chr7:35666170-35666189 MsG0780037879.01.T01:CDS 40.0%
GCTATAAATTATGGCGACCA+TGG + Chr7:35670977-35670996 MsG0780037879.01.T01:CDS 40.0%
GGATGTCATAAGAATGGTTG+AGG + Chr7:35668784-35668803 MsG0780037879.01.T01:intron 40.0%
GTATGTGAAGCCCTTTATGA+CGG + Chr7:35668213-35668232 MsG0780037879.01.T01:intron 40.0%
GTCAGATAGGAAAGTAGGTT+TGG - Chr7:35671065-35671084 None:intergenic 40.0%
GTCATAAGAATGGTTGAGGA+AGG + Chr7:35668788-35668807 MsG0780037879.01.T01:intron 40.0%
GTCCGTATCCATGTTTCATA+GGG + Chr7:35668468-35668487 MsG0780037879.01.T01:intron 40.0%
GTCGCTTCGGCTATAAATTA+TGG + Chr7:35670968-35670987 MsG0780037879.01.T01:CDS 40.0%
GTGCTCCAACATCTACTTTA+AGG - Chr7:35666178-35666197 None:intergenic 40.0%
GTTGTTTGCAGAAATGTGGT+GGG - Chr7:35666045-35666064 None:intergenic 40.0%
TAGACTTGAGTGATCGAACA+TGG + Chr7:35667694-35667713 MsG0780037879.01.T01:intron 40.0%
TAGAGTTGTACATCCGCATA+TGG + Chr7:35668494-35668513 MsG0780037879.01.T01:intron 40.0%
TCAGATGCTCCACTTAACAT+TGG - Chr7:35668273-35668292 None:intergenic 40.0%
TCGAGGATAGTGAAGAATTG+GGG - Chr7:35666132-35666151 None:intergenic 40.0%
TGAAGAAGCCAAGTACATAG+TGG + Chr7:35666250-35666269 MsG0780037879.01.T01:CDS 40.0%
TGACACTTAACATGAGACAG+AGG - Chr7:35670448-35670467 None:intergenic 40.0%
TGGTACAAAGAAGATGGAAG+GGG + Chr7:35669156-35669175 MsG0780037879.01.T01:intron 40.0%
TGTATAGAACTTTCTCCGCT+GGG - Chr7:35669019-35669038 None:intergenic 40.0%
TGTCCGTATCCATGTTTCAT+AGG + Chr7:35668467-35668486 MsG0780037879.01.T01:intron 40.0%
TTAGCAATGGTATGTGTGGT+TGG + Chr7:35667355-35667374 MsG0780037879.01.T01:intron 40.0%
TTCCCTTTCTCAAGCACAAT+CGG - Chr7:35666293-35666312 None:intergenic 40.0%
TTGTTCATTGGGGTAGAAGT+TGG + Chr7:35669088-35669107 MsG0780037879.01.T01:intron 40.0%
! AATTTTCCCTTCTCCACATG+CGG + Chr7:35668959-35668978 MsG0780037879.01.T01:intron 40.0%
! AGAAACACACATGTACTGAC+GGG + Chr7:35669743-35669762 MsG0780037879.01.T01:CDS 40.0%
! AGGTAGTGAAGTAGGTGTTT+TGG + Chr7:35668836-35668855 MsG0780037879.01.T01:intron 40.0%
! CAAGATTGCTGCAGTTTTTG+TGG + Chr7:35669942-35669961 MsG0780037879.01.T01:CDS 40.0%
! GCTTTTAGCAATTGCTTCCA+TGG + Chr7:35669790-35669809 MsG0780037879.01.T01:CDS 40.0%
! GTGGTGGAAAAAAGAAAGAG+AGG + Chr7:35667215-35667234 MsG0780037879.01.T01:intron 40.0%
! GTTTTTGTGGAACCTATCCA+AGG + Chr7:35669955-35669974 MsG0780037879.01.T01:CDS 40.0%
! TGGCAAGTGTCATTATATCG+GGG - Chr7:35670898-35670917 None:intergenic 40.0%
! TGTTGTTTGCAGAAATGTGG+TGG - Chr7:35666046-35666065 None:intergenic 40.0%
! TTGGTCATGGTGATGATGAT+TGG + Chr7:35666384-35666403 MsG0780037879.01.T01:CDS 40.0%
!! CAGCATCAAATGTAATGGAC+AGG - Chr7:35667974-35667993 None:intergenic 40.0%
!! CCTCAATTTTGTATCGGTGT+TGG + Chr7:35666805-35666824 MsG0780037879.01.T01:intron 40.0%
!! CGGACTGATTTGTTTCATGA+AGG + Chr7:35668732-35668751 MsG0780037879.01.T01:intron 40.0%
!! GAAATGGGTGAGTTTGTTGT+TGG - Chr7:35666078-35666097 None:intergenic 40.0%
!! TCGAACATGGTTCTAACTGT+TGG + Chr7:35667707-35667726 MsG0780037879.01.T01:intron 40.0%
AAACCGTGTCTCTGTTCACA+CGG + Chr7:35668518-35668537 MsG0780037879.01.T01:intron 45.0%
AACCTCTCACAACTCTAGTG+GGG + Chr7:35667120-35667139 MsG0780037879.01.T01:intron 45.0%
AAGGTTACTCCAGGCATAAC+AGG - Chr7:35669874-35669893 None:intergenic 45.0%
ACCAAACGCAATTGTAGAGG+AGG + Chr7:35666196-35666215 MsG0780037879.01.T01:CDS 45.0%
AGCACCAAACGCAATTGTAG+AGG + Chr7:35666193-35666212 MsG0780037879.01.T01:CDS 45.0%
CCAAAGCAGGCATACAACAA+AGG + Chr7:35670182-35670201 MsG0780037879.01.T01:intron 45.0%
CCAGGCATAACAGGTTCAAA+AGG - Chr7:35669865-35669884 None:intergenic 45.0%
GAACCTCTCACAACTCTAGT+GGG + Chr7:35667119-35667138 MsG0780037879.01.T01:intron 45.0%
GAGTTTCACTGCAGAGCAAA+TGG - Chr7:35667784-35667803 None:intergenic 45.0%
GATGCTGTTAAAAGAGAGCC+AGG + Chr7:35667987-35668006 MsG0780037879.01.T01:intron 45.0%
GGCACTTCTTGTGTTTGATG+AGG + Chr7:35670047-35670066 MsG0780037879.01.T01:CDS 45.0%
GTATAGAACTTTCTCCGCTG+GGG - Chr7:35669018-35669037 None:intergenic 45.0%
TATAGCCGAAGCGACTTTCT+CGG - Chr7:35670963-35670982 None:intergenic 45.0%
TCAAATTGAGATGACCCCAG+CGG + Chr7:35669001-35669020 MsG0780037879.01.T01:intron 45.0%
TCCTCCTCTACAATTGCGTT+TGG - Chr7:35666200-35666219 None:intergenic 45.0%
TCTTCACTATCCTCGATCAC+TGG + Chr7:35666136-35666155 MsG0780037879.01.T01:CDS 45.0%
TGAACCTCTCACAACTCTAG+TGG + Chr7:35667118-35667137 MsG0780037879.01.T01:intron 45.0%
TGGAACCTATCCAAGGAGAA+GGG + Chr7:35669962-35669981 MsG0780037879.01.T01:CDS 45.0%
TGTATATTCCCCCTTCTCCT+TGG - Chr7:35669975-35669994 None:intergenic 45.0%
TGTTTGTTTGGCTGCTGTGT+GGG - Chr7:35666010-35666029 None:intergenic 45.0%
TTCCAGCTGTCAATACGAGA+AGG - Chr7:35671240-35671259 None:intergenic 45.0%
! ATGTTACCGGCTATGAAGCA+CGG - Chr7:35666749-35666768 None:intergenic 45.0%
! CACCGATTGTGCTTGAGAAA+GGG + Chr7:35666288-35666307 MsG0780037879.01.T01:CDS 45.0%
! CCTTTGTTGTATGCCTGCTT+TGG - Chr7:35670185-35670204 None:intergenic 45.0%
! CCTTTTGAACCTGTTATGCC+TGG + Chr7:35669862-35669881 MsG0780037879.01.T01:CDS 45.0%
! CTCGTATTGACAGCTGGAAA+AGG + Chr7:35671241-35671260 MsG0780037879.01.T01:CDS 45.0%
! GAGCATCTGAGATTCATTGC+AGG + Chr7:35668283-35668302 MsG0780037879.01.T01:intron 45.0%
! TCTACTTTAAGGGATGCGGT+TGG - Chr7:35666167-35666186 None:intergenic 45.0%
!! CACCTGCAAAAGTACTTCCA+TGG - Chr7:35670997-35671016 None:intergenic 45.0%
!! GGAAGGTATTTCGATGTCGA+TGG + Chr7:35668805-35668824 MsG0780037879.01.T01:intron 45.0%
!! TATATGTGTCGGTGTCGTGT+CGG + Chr7:35666685-35666704 MsG0780037879.01.T01:intron 45.0%
!! TGAGAATGTGATGGGTCATG+TGG + Chr7:35667196-35667215 MsG0780037879.01.T01:intron 45.0%
!!! CATGGAAGTACTTTTGCAGG+TGG + Chr7:35670995-35671014 MsG0780037879.01.T01:CDS 45.0%
!!! GACCATGGAAGTACTTTTGC+AGG + Chr7:35670992-35671011 MsG0780037879.01.T01:CDS 45.0%
AAGCGACTTTCTCGGTTACG+AGG - Chr7:35670955-35670974 None:intergenic 50.0%
ACACTTGCCAAACCTCTTGC+TGG + Chr7:35670908-35670927 MsG0780037879.01.T01:CDS 50.0%
ACTAGACTCAACACGGACAC+TGG + Chr7:35666608-35666627 MsG0780037879.01.T01:intron 50.0%
AGGATTTCTTTGGGCTCACG+AGG + Chr7:35670859-35670878 MsG0780037879.01.T01:CDS 50.0%
ATTCCCCCTTCTCCTTGGAT+AGG - Chr7:35669970-35669989 None:intergenic 50.0%
CATCCGTGTGAACAGAGACA+CGG - Chr7:35668524-35668543 None:intergenic 50.0%
CATGTAGCACAGACACTCCT+CGG + Chr7:35668308-35668327 MsG0780037879.01.T01:intron 50.0%
CGACACGTGAAAGAGATTCG+CGG + Chr7:35671142-35671161 MsG0780037879.01.T01:CDS 50.0%
CGCGGTGTGGGGTTAATTAT+AGG + Chr7:35671160-35671179 MsG0780037879.01.T01:CDS 50.0%
CGTAACCGAGAAAGTCGCTT+CGG + Chr7:35670955-35670974 MsG0780037879.01.T01:CDS 50.0%
GAAAGAGAGGAAAGGGAGAG+TGG + Chr7:35667228-35667247 MsG0780037879.01.T01:intron 50.0%
GAACCTATCCAAGGAGAAGG+GGG + Chr7:35669964-35669983 MsG0780037879.01.T01:CDS 50.0%
GACTTTCTCGGTTACGAGGA+CGG - Chr7:35670951-35670970 None:intergenic 50.0%
GAGACACGGTTTGCCATATG+CGG - Chr7:35668510-35668529 None:intergenic 50.0%
GCTGTCAATGCACTTGGTCA+TGG + Chr7:35666371-35666390 MsG0780037879.01.T01:CDS 50.0%
GGAACCTATCCAAGGAGAAG+GGG + Chr7:35669963-35669982 MsG0780037879.01.T01:CDS 50.0%
GGGATTGCTGTCAATGCACT+TGG + Chr7:35666365-35666384 MsG0780037879.01.T01:CDS 50.0%
GTAGACGCTTGCCGAAATTC+TGG + Chr7:35671214-35671233 MsG0780037879.01.T01:CDS 50.0%
GTGAAAGAGATTCGCGGTGT+GGG + Chr7:35671148-35671167 MsG0780037879.01.T01:CDS 50.0%
GTGGAACCTATCCAAGGAGA+AGG + Chr7:35669961-35669980 MsG0780037879.01.T01:CDS 50.0%
GTGTTTGTTTGGCTGCTGTG+TGG - Chr7:35666011-35666030 None:intergenic 50.0%
GTTACGAGGACGGATCCAAT+AGG - Chr7:35670941-35670960 None:intergenic 50.0%
GTTTGTTTGGCTGCTGTGTG+GGG - Chr7:35666009-35666028 None:intergenic 50.0%
TATGAAGCACGGACACTCCT+CGG - Chr7:35666738-35666757 None:intergenic 50.0%
TGAAAGAGATTCGCGGTGTG+GGG + Chr7:35671149-35671168 MsG0780037879.01.T01:CDS 50.0%
TTTCGGCAAGCGTCTACCAA+AGG - Chr7:35671211-35671230 None:intergenic 50.0%
! ACTTTAAGGGATGCGGTTGG+TGG - Chr7:35666164-35666183 None:intergenic 50.0%
! CTTTAAGGGATGCGGTTGGT+GGG - Chr7:35666163-35666182 None:intergenic 50.0%
! GCTTTTCCGCATGTGGAGAA+GGG - Chr7:35668968-35668987 None:intergenic 50.0%
! TATTAGCTGTGTCGGCGTGT+CGG + Chr7:35668425-35668444 MsG0780037879.01.T01:intron 50.0%
! TGCTTTTCCGCATGTGGAGA+AGG - Chr7:35668969-35668988 None:intergenic 50.0%
!! GAATGTGATGGGTCATGTGG+TGG + Chr7:35667199-35667218 MsG0780037879.01.T01:intron 50.0%
!! GCACCGATTGTGCTTGAGAA+AGG + Chr7:35666287-35666306 MsG0780037879.01.T01:CDS 50.0%
!! TAGAAGTGTCGGTGTCGTGT+CGG - Chr7:35668375-35668394 None:intergenic 50.0%
ACACGGACACTGGACATGAC+AGG + Chr7:35666618-35666637 MsG0780037879.01.T01:intron 55.0%
ATAGGTAGGCCTCCAGCAAG+AGG - Chr7:35670923-35670942 None:intergenic 55.0%
ATGGATACGGACACGGACAC+CGG - Chr7:35668460-35668479 None:intergenic 55.0%
CACCCCACTAGAGTTGTGAG+AGG - Chr7:35667125-35667144 None:intergenic 55.0%
CACGGACACTGGACATGACA+GGG + Chr7:35666619-35666638 MsG0780037879.01.T01:intron 55.0%
CGAGGACGGATCCAATAGGT+AGG - Chr7:35670937-35670956 None:intergenic 55.0%
CGTGAAAGAGATTCGCGGTG+TGG + Chr7:35671147-35671166 MsG0780037879.01.T01:CDS 55.0%
CTTGCCAAACCTCTTGCTGG+AGG + Chr7:35670911-35670930 MsG0780037879.01.T01:CDS 55.0%
CTTGCTGGAGGCCTACCTAT+TGG + Chr7:35670923-35670942 MsG0780037879.01.T01:CDS 55.0%
GAGTGTCCGTGCTTCATAGC+CGG + Chr7:35666740-35666759 MsG0780037879.01.T01:intron 55.0%
GATTAGGCGTGTCCCAGTGT+CGG + Chr7:35668330-35668349 MsG0780037879.01.T01:intron 55.0%
GCACAGACACTCCTCGGATT+AGG + Chr7:35668314-35668333 MsG0780037879.01.T01:intron 55.0%
GGATGTGTCAGCGACACCTT+TGG + Chr7:35671192-35671211 MsG0780037879.01.T01:CDS 55.0%
GGCTGCTGTGTGGGGAATTA+GGG - Chr7:35666001-35666020 None:intergenic 55.0%
TAGGCCTCCAGCAAGAGGTT+TGG - Chr7:35670918-35670937 None:intergenic 55.0%
TGCTTCCATGGGAGAACCCT+GGG + Chr7:35669802-35669821 MsG0780037879.01.T01:CDS 55.0%
TGGCTGCTGTGTGGGGAATT+AGG - Chr7:35666002-35666021 None:intergenic 55.0%
TTGCTTCCATGGGAGAACCC+TGG + Chr7:35669801-35669820 MsG0780037879.01.T01:CDS 55.0%
! CTTTGGGCTCACGAGGCTTT+TGG + Chr7:35670866-35670885 MsG0780037879.01.T01:CDS 55.0%
! GGCCTTCTCGTATTGACAGC+TGG + Chr7:35671235-35671254 MsG0780037879.01.T01:CDS 55.0%
! TGGTTTGCAGAGGTCTCCAG+AGG + Chr7:35668633-35668652 MsG0780037879.01.T01:intron 55.0%
!! GGTGTCTGCTTTTCCGCATG+TGG - Chr7:35668975-35668994 None:intergenic 55.0%
ACACGACACGTGTCCGACAC+TGG - Chr7:35668346-35668365 None:intergenic 60.0%
ACTGGGACACGCCTAATCCG+AGG - Chr7:35668328-35668347 None:intergenic 60.0%
CACGACACGTGTCCGACACT+GGG - Chr7:35668345-35668364 None:intergenic 60.0%
CGTCAAAGCAAGTGCGCCCA+GGG - Chr7:35669821-35669840 None:intergenic 60.0%
TCCTCGGATCAGGCGTGTCT+CGG - Chr7:35666722-35666741 None:intergenic 60.0%
TCGTCAAAGCAAGTGCGCCC+AGG - Chr7:35669822-35669841 None:intergenic 60.0%
TGCAGAGGTCTCCAGAGGTC+TGG + Chr7:35668638-35668657 MsG0780037879.01.T01:intron 60.0%
! GATCAGGCGTGTCTCGGTGT+CGG - Chr7:35666716-35666735 None:intergenic 60.0%
! GTTGGTGGGACCAGTGATCG+AGG - Chr7:35666149-35666168 None:intergenic 60.0%
!! TGTCGGTGTCGTGTCGGTGT+CGG - Chr7:35668369-35668388 None:intergenic 60.0%
ACCGAGACACGCCTGATCCG+AGG + Chr7:35666718-35666737 MsG0780037879.01.T01:intron 65.0%
GCACGGACACTCCTCGGATC+AGG - Chr7:35666732-35666751 None:intergenic 65.0%
! CTGTGTCGGCGTGTCGGTGT+CGG + Chr7:35668431-35668450 MsG0780037879.01.T01:intron 65.0%
GTGCGCCCAGGGTTCTCCCA+TGG - Chr7:35669810-35669829 None:intergenic 70.0%
!! GGCGTGTCGGTGTCGGTGTC+CGG + Chr7:35668438-35668457 MsG0780037879.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 35665935 35671601 35665935 ID=MsG0780037879.01;Name=MsG0780037879.01
Chr7 mRNA 35665935 35671601 35665935 ID=MsG0780037879.01.T01;Parent=MsG0780037879.01;Name=MsG0780037879.01.T01;_AED=0.36;_eAED=0.36;_QI=100|1|1|1|1|1|3|232|469
Chr7 exon 35665935 35666475 35665935 ID=MsG0780037879.01.T01:exon:16406;Parent=MsG0780037879.01.T01
Chr7 exon 35669634 35670068 35669634 ID=MsG0780037879.01.T01:exon:16407;Parent=MsG0780037879.01.T01
Chr7 exon 35670836 35671601 35670836 ID=MsG0780037879.01.T01:exon:16408;Parent=MsG0780037879.01.T01
Chr7 five_prime_UTR 35665935 35666034 35665935 ID=MsG0780037879.01.T01:five_prime_utr;Parent=MsG0780037879.01.T01
Chr7 CDS 35666035 35666475 35666035 ID=MsG0780037879.01.T01:cds;Parent=MsG0780037879.01.T01
Chr7 CDS 35669634 35670068 35669634 ID=MsG0780037879.01.T01:cds;Parent=MsG0780037879.01.T01
Chr7 CDS 35670836 35671369 35670836 ID=MsG0780037879.01.T01:cds;Parent=MsG0780037879.01.T01
Chr7 three_prime_UTR 35671370 35671601 35671370 ID=MsG0780037879.01.T01:three_prime_utr;Parent=MsG0780037879.01.T01
Gene Sequence

>MsG0780037879.01.T01

ATGTCGACCCACCACATTTCTGCAAACAACACAACATTCACCAACAACAAACTCACCCATTTCAACAACAACAACAACAACAACAAACATTTCTCCCCAATTCTTCACTATCCTCGATCACTGGTCCCACCAACCGCATCCCTTAAAGTAGATGTTGGAGCACCAAACGCAATTGTAGAGGAGGACAGTGTGAAGAAGACTAAAGAGGTGATTGATGAAGAAGCCAAGTACATAGTGGGTACTTATGCAAGAGCACCGATTGTGCTTGAGAAAGGGAAAGGTTGTAAAGTGTATGATGTTGAAGGGAATGAGTATTTGGATTGTAGTGGTGGGATTGCTGTCAATGCACTTGGTCATGGTGATGATGATTGGTTGAAAGCTGTTGTTGATCAAGCTGGGTTACTTACTCATGTTAGCAATATTTATCACTCTCTTCCTCAGGTAGAACTTGCAAAGTGTTTAGTAGCTTCTTCTTTTGCCGATCGTGTATTTTTTGCAAATTCTGGAACCGAAGCAAATGAAGCAGCTATTAAATTTTCCAGAAAATATCAGAAACACACATGTACTGACGGGAAAGTTCCAGCTACCGAGTTTTTAGCTTTTAGCAATTGCTTCCATGGGAGAACCCTGGGCGCACTTGCTTTGACGAGTAAAGTGCAGTACAGAACACCTTTTGAACCTGTTATGCCTGGAGTAACCTTTTTAGAGTATGGAAATGCACCGGCCGCTGTAGAGTTAATTCAGCAGGGCAAGATTGCTGCAGTTTTTGTGGAACCTATCCAAGGAGAAGGGGGAATATACAGTGCCACTAAAGAATTTCTACAGTCTCTGCGAAATGCTTGTGATGAAACTGGGGCACTTCTTGTGTTTGATGAGGTTCAATGTGGTTTAGGTAGATCAGGATTTCTTTGGGCTCACGAGGCTTTTGGAGTCTTCCCCGATATAATGACACTTGCCAAACCTCTTGCTGGAGGCCTACCTATTGGATCCGTCCTCGTAACCGAGAAAGTCGCTTCGGCTATAAATTATGGCGACCATGGAAGTACTTTTGCAGGTGGTCCTCTTATTTGCAATGCTGCTCTTGCCGTTTTGAATAAAATATCCAAACCTACTTTCCTATCTGACGTATCAAAGAAAGGTTTATACTTCAAAGAACTACTAAAACAGAAATTGGGCGGAAATCGACACGTGAAAGAGATTCGCGGTGTGGGGTTAATTATAGGAATTGATTTGGATGTGTCAGCGACACCTTTGGTAGACGCTTGCCGAAATTCTGGCCTTCTCGTATTGACAGCTGGAAAAGGTAATGTTGTTAGGCTTGTTCCACCATTGATTATAACAGAACAGGAGATTGAGTATGCAGCTGATATTCTAAGCCAAACTTTGCATGTTTTAGATGCCAATAATTAA
Protein sequence

>MsG0780037879.01.T01

MSTHHISANNTTFTNNKLTHFNNNNNNNKHFSPILHYPRSLVPPTASLKVDVGAPNAIVEEDSVKKTKEVIDEEAKYIVGTYARAPIVLEKGKGCKVYDVEGNEYLDCSGGIAVNALGHGDDDWLKAVVDQAGLLTHVSNIYHSLPQVELAKCLVASSFADRVFFANSGTEANEAAIKFSRKYQKHTCTDGKVPATEFLAFSNCFHGRTLGALALTSKVQYRTPFEPVMPGVTFLEYGNAPAAVELIQQGKIAAVFVEPIQGEGGIYSATKEFLQSLRNACDETGALLVFDEVQCGLGRSGFLWAHEAFGVFPDIMTLAKPLAGGLPIGSVLVTEKVASAINYGDHGSTFAGGPLICNAALAVLNKISKPTFLSDVSKKGLYFKELLKQKLGGNRHVKEIRGVGLIIGIDLDVSATPLVDACRNSGLLVLTAGKGNVVRLVPPLIITEQEIEYAADILSQTLHVLDANN*