AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023846.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023846.01.T01 MTR_8g103400 79.703 202 21 2 1 185 1 199 1.35e-99 286
MsG0480023846.01.T01 MTR_8g103400 79.500 200 21 2 1 183 1 197 3.73e-97 282
MsG0480023846.01.T01 MTR_8g103420 72.821 195 31 3 8 183 1 192 1.30e-93 273
MsG0480023846.01.T01 MTR_1g022150 57.068 191 55 3 19 185 3 190 1.50e-62 194
MsG0480023846.01.T01 MTR_3g095210 52.247 178 60 4 27 183 10 183 1.33e-53 171
MsG0480023846.01.T02 MTR_8g103400 79.703 202 21 2 1 185 1 199 1.35e-99 286
MsG0480023846.01.T02 MTR_8g103400 79.500 200 21 2 1 183 1 197 3.73e-97 282
MsG0480023846.01.T02 MTR_8g103420 72.821 195 31 3 8 183 1 192 1.30e-93 273
MsG0480023846.01.T02 MTR_1g022150 57.068 191 55 3 19 185 3 190 1.50e-62 194
MsG0480023846.01.T02 MTR_3g095210 52.247 178 60 4 27 183 10 183 1.33e-53 171
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023846.01.T01 AT2G20130 62.088 182 49 4 21 183 6 186 2.94e-66 204
MsG0480023846.01.T01 AT2G20120 59.694 196 54 6 11 183 3 196 4.67e-66 203
MsG0480023846.01.T01 AT2G20120 59.694 196 54 6 11 183 3 196 4.67e-66 203
MsG0480023846.01.T01 AT2G18460 55.435 184 58 3 21 183 6 186 6.89e-60 188
MsG0480023846.01.T01 AT1G43130 54.491 167 52 4 34 183 23 182 2.84e-49 160
MsG0480023846.01.T01 AT1G43130 58.451 142 39 2 59 183 11 149 6.26e-48 156
MsG0480023846.01.T01 AT1G43130 58.451 142 39 2 59 183 11 149 6.26e-48 156
MsG0480023846.01.T02 AT2G20130 62.088 182 49 4 21 183 6 186 2.94e-66 204
MsG0480023846.01.T02 AT2G20120 59.694 196 54 6 11 183 3 196 4.67e-66 203
MsG0480023846.01.T02 AT2G20120 59.694 196 54 6 11 183 3 196 4.67e-66 203
MsG0480023846.01.T02 AT2G18460 55.435 184 58 3 21 183 6 186 6.89e-60 188
MsG0480023846.01.T02 AT1G43130 54.491 167 52 4 34 183 23 182 2.84e-49 160
MsG0480023846.01.T02 AT1G43130 58.451 142 39 2 59 183 11 149 6.26e-48 156
MsG0480023846.01.T02 AT1G43130 58.451 142 39 2 59 183 11 149 6.26e-48 156

Find 27 sgRNAs with CRISPR-Local

Find 363 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAATAAAATAATTGAGAAAT+TGG 0.212115 4:+90420196 None:intergenic
CGTTTCAAGTTTCGCAAAAC+TGG 0.263206 4:-90420282 None:intergenic
GATTTATCGTCGACCATAAC+TGG 0.355353 4:-90420329 None:intergenic
GGAGGAAGACGAAGAAGGTT+TGG 0.385220 4:-90420429 None:intergenic
GGTTCTTCCTCCTCCAGTTA+TGG 0.394330 4:+90420316 MsG0480023846.01.T01:CDS
ACTTGAAACGGCGTCGTTGA+TGG 0.403433 4:+90420295 MsG0480023846.01.T01:exon
CGAAGAAGGTTTGGAAGCAT+TGG 0.448650 4:-90420420 None:intergenic
TGGTCGCCGGCATTAGCGAC+GGG 0.488768 4:-90420395 None:intergenic
CTTATCCCCGTCGCTAATGC+CGG 0.513099 4:+90420389 MsG0480023846.01.T01:CDS
GGAAGCATTGGAGTGGTCGC+CGG 0.519869 4:-90420408 None:intergenic
GCCGGCATGATGAACGGAGG+AGG 0.531869 4:-90420447 None:intergenic
CTGCCGCTGACGACAGTAGA+GGG 0.537551 4:-90420353 None:intergenic
TCCTCCTCCGTTCATCATGC+CGG 0.539661 4:+90420446 MsG0480023846.01.T01:CDS
GTGGTCGCCGGCATTAGCGA+CGG 0.553074 4:-90420396 None:intergenic
TGCAGAAGAAGCGAAGCAAA+AGG 0.567795 4:+90420249 MsG0480023846.01.T01:intron
TGAATCCCTAACCTCACGGC+CGG 0.572005 4:-90420465 None:intergenic
TCGTCGACCATAACTGGAGG+AGG 0.577353 4:-90420323 None:intergenic
CTCACGGCCGGCATGATGAA+CGG 0.585801 4:-90420453 None:intergenic
ACGGAGGAGGAAGACGAAGA+AGG 0.610501 4:-90420434 None:intergenic
GCCGCTGACGACAGTAGAGG+GGG 0.617322 4:-90420351 None:intergenic
CGTTCATCATGCCGGCCGTG+AGG 0.624713 4:+90420454 MsG0480023846.01.T01:CDS
TGCCGCTGACGACAGTAGAG+GGG 0.630092 4:-90420352 None:intergenic
TCTGCCGCTGACGACAGTAG+AGG 0.646875 4:-90420354 None:intergenic
AAGGTTTGGAAGCATTGGAG+TGG 0.656476 4:-90420415 None:intergenic
GGTCGCCGGCATTAGCGACG+GGG 0.686093 4:-90420394 None:intergenic
ACGGCCGGCATGATGAACGG+AGG 0.688570 4:-90420450 None:intergenic
TTATCGTCGACCATAACTGG+AGG 0.712922 4:-90420326 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAAGATTCGATTATTA+AGG + Chr4:90424218-90424237 MsG0480023846.01.T01:intron 15.0%
!! AAAATTGCAATATATATGAA+TGG - Chr4:90421309-90421328 None:intergenic 15.0%
!! AAATAAGATTCGATTATTAA+GGG + Chr4:90424219-90424238 MsG0480023846.01.T01:intron 15.0%
!! AAATTGCAATATATATGAAT+GGG - Chr4:90421308-90421327 None:intergenic 15.0%
!! AATGTAGATAAAAAAATTAG+AGG - Chr4:90421669-90421688 None:intergenic 15.0%
!! AGAAAAAAAACAATTAGAAA+AGG - Chr4:90423827-90423846 None:intergenic 15.0%
!! ATTATCTATTTATTACTAAG+AGG + Chr4:90422448-90422467 MsG0480023846.01.T01:intron 15.0%
!! CAAATACTTAAAAAATTCAA+CGG - Chr4:90420504-90420523 None:intergenic 15.0%
!! GATAGTTATTTAATGAATAT+GGG - Chr4:90422406-90422425 None:intergenic 15.0%
!! TCTTAGTAATAAATAGATAA+TGG - Chr4:90422449-90422468 None:intergenic 15.0%
!! AAAAAGAATTGAATTGCTAA+GGG + Chr4:90424298-90424317 MsG0480023846.01.T01:intron 20.0%
!! AAATTATGTTAATTCAAACC+AGG - Chr4:90421202-90421221 None:intergenic 20.0%
!! AAATTTATTACACTAAATGC+TGG + Chr4:90422215-90422234 MsG0480023846.01.T01:intron 20.0%
!! AATTAGCGATAAGAAAATAA+AGG + Chr4:90422295-90422314 MsG0480023846.01.T01:intron 20.0%
!! AATTATGTTAATTCAAACCA+GGG - Chr4:90421201-90421220 None:intergenic 20.0%
!! ATCAAAAAAGACGTAAAAAA+AGG - Chr4:90423743-90423762 None:intergenic 20.0%
!! GGATAGTTATTTAATGAATA+TGG - Chr4:90422407-90422426 None:intergenic 20.0%
!! GTACTAAATAACATGTATAT+CGG + Chr4:90421062-90421081 MsG0480023846.01.T01:intron 20.0%
!! TAAATATATGCCAAAGTTAT+AGG - Chr4:90424406-90424425 None:intergenic 20.0%
!! TATATAAGAGAAAAAAATGC+AGG - Chr4:90424118-90424137 None:intergenic 20.0%
!! TGTTAAACTTCTTATTGTAA+CGG - Chr4:90422685-90422704 None:intergenic 20.0%
!!! ACTATTGCTTTTCATATAAT+TGG + Chr4:90420878-90420897 MsG0480023846.01.T01:intron 20.0%
!!! CTTACTCTCTTTTTTTTTTT+GGG + Chr4:90424809-90424828 MsG0480023846.01.T01:intron 20.0%
!!! GTAATAAATAGATAATGGAA+AGG - Chr4:90422444-90422463 None:intergenic 20.0%
!!! TATTGTGAAAATAGACATTT+TGG - Chr4:90423376-90423395 None:intergenic 20.0%
!!! TCTTACTCTCTTTTTTTTTT+TGG + Chr4:90424808-90424827 MsG0480023846.01.T01:intron 20.0%
!!! TTGTAGCAGAAAAATAATTT+TGG + Chr4:90424247-90424266 MsG0480023846.01.T01:intron 20.0%
!!! TTTGAGTTGTCTTTATATAA+TGG + Chr4:90424519-90424538 MsG0480023846.01.T01:intron 20.0%
! AAAAATAATCGAATTGCTGA+GGG + Chr4:90424444-90424463 MsG0480023846.01.T01:intron 25.0%
! ACCAAGACTTTCAAAAAAAT+TGG - Chr4:90422345-90422364 None:intergenic 25.0%
! AGACTTTCAAAAAAATTGGA+AGG - Chr4:90422341-90422360 None:intergenic 25.0%
! AGGACCATAAAATTGTATAA+AGG - Chr4:90424386-90424405 None:intergenic 25.0%
! AGTTATTTAATGAATATGGG+AGG - Chr4:90422403-90422422 None:intergenic 25.0%
! ATGTAAACTGAGAAGATATT+AGG - Chr4:90421531-90421550 None:intergenic 25.0%
! ATTATATAGTCTAAACCAAG+GGG - Chr4:90423267-90423286 None:intergenic 25.0%
! ATTATGTTAATTCAAACCAG+GGG - Chr4:90421200-90421219 None:intergenic 25.0%
! ATTCAAAACATCAGATCTAA+CGG + Chr4:90423131-90423150 MsG0480023846.01.T01:intron 25.0%
! CAGGAAATAATAAGATAAGA+TGG - Chr4:90421596-90421615 None:intergenic 25.0%
! CATTATATAGTCTAAACCAA+GGG - Chr4:90423268-90423287 None:intergenic 25.0%
! CTGAAGATAATCTGAAAAAT+GGG - Chr4:90422093-90422112 None:intergenic 25.0%
! GAAAAAGAATTGAATTGCTA+AGG + Chr4:90424297-90424316 MsG0480023846.01.T01:intron 25.0%
! GTTATTTAATGAATATGGGA+GGG - Chr4:90422402-90422421 None:intergenic 25.0%
! GTTTAAAAAGGATTAAGTGA+TGG + Chr4:90423432-90423451 MsG0480023846.01.T01:intron 25.0%
! TAATCACTTAAAGGATAGAA+TGG - Chr4:90423083-90423102 None:intergenic 25.0%
! TATCATGTAATGGTAACATT+TGG - Chr4:90421738-90421757 None:intergenic 25.0%
! TCTGAAGATAATCTGAAAAA+TGG - Chr4:90422094-90422113 None:intergenic 25.0%
! TGATGCTAATGTATATCTAA+TGG + Chr4:90424978-90424997 MsG0480023846.01.T01:intron 25.0%
! TTATTTCAGAACAATCTAGA+AGG - Chr4:90422147-90422166 None:intergenic 25.0%
! TTTAAGTGATTACCAAATCT+GGG + Chr4:90423091-90423110 MsG0480023846.01.T01:intron 25.0%
!! ATTTTATGGTCCTATAACTT+TGG + Chr4:90424393-90424412 MsG0480023846.01.T01:intron 25.0%
!! ATTTTGCAAGTTTCTTCATA+TGG + Chr4:90421218-90421237 MsG0480023846.01.T01:intron 25.0%
!! GTTGCCTTTATACAATTTTA+TGG + Chr4:90424379-90424398 MsG0480023846.01.T01:intron 25.0%
!! TTTGCTAGTTATGTAGTTTT+AGG + Chr4:90421793-90421812 MsG0480023846.01.T01:intron 25.0%
!!! AAAACTACTCTGAAATGTTA+AGG - Chr4:90423581-90423600 None:intergenic 25.0%
!!! CAATAAAGTGTCGATTTAAA+GGG + Chr4:90424025-90424044 MsG0480023846.01.T01:intron 25.0%
!!! CATTTTGGCTATAATTTGAT+TGG - Chr4:90423361-90423380 None:intergenic 25.0%
!!! TCAATAAAGTGTCGATTTAA+AGG + Chr4:90424024-90424043 MsG0480023846.01.T01:intron 25.0%
!!! TCAATATCACTGGTTTAAAA+AGG + Chr4:90423420-90423439 MsG0480023846.01.T01:intron 25.0%
!!! TCCAATTTTTTTGAAAGTCT+TGG + Chr4:90422341-90422360 MsG0480023846.01.T01:intron 25.0%
!!! TTACGTCTTTTTTGATTTTG+TGG + Chr4:90423747-90423766 MsG0480023846.01.T01:intron 25.0%
!!! TTATTGGCTTAAATCATTGT+GGG - Chr4:90422582-90422601 None:intergenic 25.0%
!!! TTGCTAGTTATGTAGTTTTA+GGG + Chr4:90421794-90421813 MsG0480023846.01.T01:intron 25.0%
!!! TTGTGTTTTAGTTCTTTTTG+TGG + Chr4:90423638-90423657 MsG0480023846.01.T01:intron 25.0%
!!! TTTTAAGTAAAAGTACAAGC+TGG + Chr4:90421270-90421289 MsG0480023846.01.T01:intron 25.0%
AAAGAAATCCCTGAAACTAA+GGG - Chr4:90420824-90420843 None:intergenic 30.0%
AAATTGACAGAAACAACACA+TGG - Chr4:90421431-90421450 None:intergenic 30.0%
AACACATATACACCATATGA+TGG - Chr4:90421704-90421723 None:intergenic 30.0%
AAGCTCTCTAATTCTTCAAA+GGG - Chr4:90422372-90422391 None:intergenic 30.0%
AATCGACACTTTATTGATCT+TGG - Chr4:90424021-90424040 None:intergenic 30.0%
ACAATGCATAATATATGCAG+GGG - Chr4:90424905-90424924 None:intergenic 30.0%
ACTTCTTATTGTAACGGTTA+TGG - Chr4:90422679-90422698 None:intergenic 30.0%
AGATAATCTGAAAAATGGGT+TGG - Chr4:90422089-90422108 None:intergenic 30.0%
ATAACCTTCATCTTCTTGAT+CGG + Chr4:90424645-90424664 MsG0480023846.01.T01:CDS 30.0%
ATCGACACTTTATTGATCTT+GGG - Chr4:90424020-90424039 None:intergenic 30.0%
ATTCCAAGATGAACATAGAT+CGG - Chr4:90423937-90423956 None:intergenic 30.0%
CAAACCTATGAATATGATCA+CGG - Chr4:90422811-90422830 None:intergenic 30.0%
CAACATATTAAATGCTACCA+TGG - Chr4:90424570-90424589 None:intergenic 30.0%
CATCTTGGAATCAATATCTT+TGG + Chr4:90423946-90423965 MsG0480023846.01.T01:intron 30.0%
CCATTATATAGTCTAAACCA+AGG - Chr4:90423269-90423288 None:intergenic 30.0%
CCTTGGTTTAGACTATATAA+TGG + Chr4:90423266-90423285 MsG0480023846.01.T01:intron 30.0%
CTCAAATGATGTGAAAGTAA+AGG - Chr4:90422024-90422043 None:intergenic 30.0%
CTTCATGCAACAAAATGAAT+AGG - Chr4:90421376-90421395 None:intergenic 30.0%
CTTCTTATTGTAACGGTTAT+GGG - Chr4:90422678-90422697 None:intergenic 30.0%
CTTTAAGTGATTACCAAATC+TGG + Chr4:90423090-90423109 MsG0480023846.01.T01:intron 30.0%
GAAAAATAATCGAATTGCTG+AGG + Chr4:90424443-90424462 MsG0480023846.01.T01:intron 30.0%
GAAGTGTAACTATCATGTAA+TGG - Chr4:90421748-90421767 None:intergenic 30.0%
GACAATGCATAATATATGCA+GGG - Chr4:90424906-90424925 None:intergenic 30.0%
GACGGTACATAACTTATAAA+TGG - Chr4:90423183-90423202 None:intergenic 30.0%
GCTTAAAGAGTTAAACTTCT+TGG + Chr4:90424598-90424617 MsG0480023846.01.T01:intron 30.0%
GCTTATTTAAGCTTATCTAC+TGG - Chr4:90420788-90420807 None:intergenic 30.0%
GTATGGTACAATAAGCAATT+GGG - Chr4:90423339-90423358 None:intergenic 30.0%
GTCAAAGAAATCAACAGTTA+GGG + Chr4:90423014-90423033 MsG0480023846.01.T01:intron 30.0%
TAAAGGTTTACGACTACAAA+TGG + Chr4:90422312-90422331 MsG0480023846.01.T01:intron 30.0%
TAAGTTATGTACCGTCAATA+CGG + Chr4:90423187-90423206 MsG0480023846.01.T01:intron 30.0%
TAATTTATGCTGCCATCATA+TGG + Chr4:90421689-90421708 MsG0480023846.01.T01:intron 30.0%
TCCAACCAAAAGTAGTTAAT+TGG + Chr4:90424487-90424506 MsG0480023846.01.T01:intron 30.0%
TGCAATATTCTCAATATCAC+TGG + Chr4:90423410-90423429 MsG0480023846.01.T01:intron 30.0%
TGCATGAGTGATTGAATTTA+TGG + Chr4:90420540-90420559 MsG0480023846.01.T01:intron 30.0%
TGCTAATGTATATCTAATGG+CGG + Chr4:90424981-90425000 MsG0480023846.01.T01:intron 30.0%
TGGCTATAATTTGATTGGTA+TGG - Chr4:90423356-90423375 None:intergenic 30.0%
TTAAGTGATTACCAAATCTG+GGG + Chr4:90423092-90423111 MsG0480023846.01.T01:intron 30.0%
TTATAGATATGACGAACAAG+AGG - Chr4:90424738-90424757 None:intergenic 30.0%
TTCAAAGTTGTAGTCCTTAA+TGG + Chr4:90423221-90423240 MsG0480023846.01.T01:intron 30.0%
TTGTAAAATAGCAGCTATAG+CGG - Chr4:90421126-90421145 None:intergenic 30.0%
TTGTGTTTATCTTGTGTGAT+TGG - Chr4:90420626-90420645 None:intergenic 30.0%
TTTAACAAATACCCCATTGA+TGG + Chr4:90422698-90422717 MsG0480023846.01.T01:intron 30.0%
TTTGTGGAAATTGTTGTCAA+TGG + Chr4:90423654-90423673 MsG0480023846.01.T01:intron 30.0%
! AACTGCCAATTAACTACTTT+TGG - Chr4:90424495-90424514 None:intergenic 30.0%
! AAGTAAAGGAAGCATAATGA+TGG + Chr4:90422906-90422925 MsG0480023846.01.T01:intron 30.0%
! ATCTATATAGTCTAGAACCA+AGG - Chr4:90423314-90423333 None:intergenic 30.0%
! ATTTTCATGTCATCATGGTT+GGG + Chr4:90424669-90424688 MsG0480023846.01.T01:CDS 30.0%
! CAGATTTGGTAATCACTTAA+AGG - Chr4:90423092-90423111 None:intergenic 30.0%
! CTATTCATTTTGTTGCATGA+AGG + Chr4:90421374-90421393 MsG0480023846.01.T01:intron 30.0%
! GATGGAATAGAAGAGTTTTT+CGG + Chr4:90422782-90422801 MsG0480023846.01.T01:intron 30.0%
! GCTGTTTATGTTATTTGTTG+TGG + Chr4:90422830-90422849 MsG0480023846.01.T01:intron 30.0%
! TCTAACACTCACTCTTTTAT+TGG + Chr4:90422501-90422520 MsG0480023846.01.T01:intron 30.0%
! TCTATATAGTCTAGAACCAA+GGG - Chr4:90423313-90423332 None:intergenic 30.0%
!! AATCCTTCCTTTGATTTTTC+CGG - Chr4:90422066-90422085 None:intergenic 30.0%
!! ACTACGGATTAACTACTTTT+TGG - Chr4:90424349-90424368 None:intergenic 30.0%
!! CATTGGTGCTATTAGTTTAA+AGG - Chr4:90420919-90420938 None:intergenic 30.0%
!! CTTATTGGCTTAAATCATTG+TGG - Chr4:90422583-90422602 None:intergenic 30.0%
!! GTTTATGTTATTTGTTGTGG+TGG + Chr4:90422833-90422852 MsG0480023846.01.T01:intron 30.0%
!! TGAGAAATTGGTGTTTTGAA+CGG + Chr4:90420208-90420227 MsG0480023846.01.T01:five_prime_UTR 30.0%
!!! AACTGTGCTTTTGTTTTAGA+TGG + Chr4:90421621-90421640 MsG0480023846.01.T01:intron 30.0%
!!! ATACCCTTTTTTGGCAAATT+GGG + Chr4:90421841-90421860 MsG0480023846.01.T01:intron 30.0%
!!! TAGTTTTAGGGTATGAAAGT+TGG + Chr4:90421806-90421825 MsG0480023846.01.T01:intron 30.0%
AAAATAGAACCCACACAAAG+TGG - Chr4:90422548-90422567 None:intergenic 35.0%
AAATTCTGTTTCAGAAGCAG+AGG + Chr4:90422238-90422257 MsG0480023846.01.T01:intron 35.0%
AAATTGAATCCCTAACCTCA+CGG - Chr4:90420472-90420491 None:intergenic 35.0%
AAGAGTTAAACTTCTTGGTC+AGG + Chr4:90424603-90424622 MsG0480023846.01.T01:intron 35.0%
AATGATGGCTACTTCTTTGA+AGG - Chr4:90425063-90425082 None:intergenic 35.0%
ATCGTCAACATTGAATTTGC+TGG + Chr4:90422119-90422138 MsG0480023846.01.T01:intron 35.0%
ATGTAGAAGGTGATTGCAAT+TGG - Chr4:90423874-90423893 None:intergenic 35.0%
CAAAGAAATCCCTGAAACTA+AGG - Chr4:90420825-90420844 None:intergenic 35.0%
CAAGCTCTCTAATTCTTCAA+AGG - Chr4:90422373-90422392 None:intergenic 35.0%
CAAGTGATTGCGAAAAATAG+CGG + Chr4:90421007-90421026 MsG0480023846.01.T01:intron 35.0%
CATGTATATCGGAACAATAG+TGG + Chr4:90421073-90421092 MsG0480023846.01.T01:intron 35.0%
CCTAATTGATTAAAACCCCT+TGG + Chr4:90423249-90423268 MsG0480023846.01.T01:intron 35.0%
CTATGAGATTGATCAGATCA+CGG + Chr4:90422963-90422982 MsG0480023846.01.T01:intron 35.0%
CTCTTTGAACACTCTCTTAT+TGG - Chr4:90422598-90422617 None:intergenic 35.0%
GAACTGACAGAAACAACTTA+CGG - Chr4:90420738-90420757 None:intergenic 35.0%
GAGCTATCTTGTAGAACTTA+TGG + Chr4:90420683-90420702 MsG0480023846.01.T01:intron 35.0%
GATCAAGAAGATGAAGGTTA+TGG - Chr4:90424646-90424665 None:intergenic 35.0%
GCATCAAAAAAGTTCATGAC+CGG + Chr4:90421482-90421501 MsG0480023846.01.T01:CDS 35.0%
GCTAATGTATATCTAATGGC+GGG + Chr4:90424982-90425001 MsG0480023846.01.T01:intron 35.0%
GGAAAAAAATGAACCAATGC+TGG - Chr4:90421179-90421198 None:intergenic 35.0%
GGAAAGGAGAAAGTGATTAA+GGG - Chr4:90422428-90422447 None:intergenic 35.0%
GGACAATGCATAATATATGC+AGG - Chr4:90424907-90424926 None:intergenic 35.0%
GGCAACTCAAAAGTTAACTA+CGG - Chr4:90424365-90424384 None:intergenic 35.0%
GGGTAATTCAGTCTAGAAAA+AGG + Chr4:90424318-90424337 MsG0480023846.01.T01:intron 35.0%
GGTATGGTACAATAAGCAAT+TGG - Chr4:90423340-90423359 None:intergenic 35.0%
GGTCAAAGAAATCAACAGTT+AGG + Chr4:90423013-90423032 MsG0480023846.01.T01:intron 35.0%
GTATGAAAGTTGGAAAGTAG+AGG + Chr4:90421816-90421835 MsG0480023846.01.T01:intron 35.0%
GTGTAGATTATGTTACCTAC+TGG + Chr4:90424541-90424560 MsG0480023846.01.T01:intron 35.0%
TAACCTTCATCTTCTTGATC+GGG + Chr4:90424646-90424665 MsG0480023846.01.T01:CDS 35.0%
TAATGATGGTAAGAGAAGTG+TGG + Chr4:90422920-90422939 MsG0480023846.01.T01:intron 35.0%
TATACTACTGACCGTATTGA+CGG - Chr4:90423201-90423220 None:intergenic 35.0%
TCAATTAGGACTTGCCATTA+AGG - Chr4:90423238-90423257 None:intergenic 35.0%
TCGACACTTTATTGATCTTG+GGG - Chr4:90424019-90424038 None:intergenic 35.0%
TGAATAGGATAACTAATGCC+AGG - Chr4:90421361-90421380 None:intergenic 35.0%
TGAATTTGAATACCTAAGCC+TGG + Chr4:90421340-90421359 MsG0480023846.01.T01:intron 35.0%
TGGAAAGGAGAAAGTGATTA+AGG - Chr4:90422429-90422448 None:intergenic 35.0%
TGGCTAGAAATTCACCTTTA+AGG + Chr4:90424845-90424864 MsG0480023846.01.T01:intron 35.0%
TTCCCCAATTTGCCAAAAAA+GGG - Chr4:90421847-90421866 None:intergenic 35.0%
TTGCAAGTTTCTTCATATGG+AGG + Chr4:90421221-90421240 MsG0480023846.01.T01:intron 35.0%
TTTCAGGGATTTCTTTGACT+TGG + Chr4:90420828-90420847 MsG0480023846.01.T01:intron 35.0%
TTTCTTCATATGGAGGAGTT+TGG + Chr4:90421228-90421247 MsG0480023846.01.T01:intron 35.0%
! AGGATTAAGTGATGGAGATA+TGG + Chr4:90423440-90423459 MsG0480023846.01.T01:intron 35.0%
! CAGTTTTGCGAAACTTGAAA+CGG + Chr4:90420283-90420302 MsG0480023846.01.T01:five_prime_UTR 35.0%
! CTATATAGTCTAGAACCAAG+GGG - Chr4:90423312-90423331 None:intergenic 35.0%
! CTTTGAAGAATTAGAGAGCT+TGG + Chr4:90422371-90422390 MsG0480023846.01.T01:intron 35.0%
! GATTTTCATGTCATCATGGT+TGG + Chr4:90424668-90424687 MsG0480023846.01.T01:CDS 35.0%
! GGGTAATTTTGTCCAGAAAA+AGG + Chr4:90424464-90424483 MsG0480023846.01.T01:intron 35.0%
! TGGTTCATTCATTTTGTGGA+TGG + Chr4:90423901-90423920 MsG0480023846.01.T01:intron 35.0%
!! ACCTTTAAGGTGAATAAGTG+GGG + Chr4:90424858-90424877 MsG0480023846.01.T01:intron 35.0%
!! ACTTGTTGTCAATTGCTGAT+CGG - Chr4:90420992-90421011 None:intergenic 35.0%
!! ATCCTTCCTTTGATTTTTCC+GGG - Chr4:90422065-90422084 None:intergenic 35.0%
!! CACCTTTAAGGTGAATAAGT+GGG + Chr4:90424857-90424876 MsG0480023846.01.T01:intron 35.0%
!! CCAAGGGGTTTTAATCAATT+AGG - Chr4:90423252-90423271 None:intergenic 35.0%
!! GCCAATTAACTACTTTTGGT+TGG - Chr4:90424491-90424510 None:intergenic 35.0%
!! TCACCTTTAAGGTGAATAAG+TGG + Chr4:90424856-90424875 MsG0480023846.01.T01:intron 35.0%
!! TTAGCTTGTTGAGATTCTCA+AGG + Chr4:90423605-90423624 MsG0480023846.01.T01:intron 35.0%
!!! ATTGGTTCATTTTTTTCCCC+TGG + Chr4:90421181-90421200 MsG0480023846.01.T01:intron 35.0%
!!! CATACCCTTTTTTGGCAAAT+TGG + Chr4:90421840-90421859 MsG0480023846.01.T01:intron 35.0%
!!! CGGATTAACTACTTTTTGGT+CGG - Chr4:90424345-90424364 None:intergenic 35.0%
!!! TACCCTTTTTTGGCAAATTG+GGG + Chr4:90421842-90421861 MsG0480023846.01.T01:intron 35.0%
!!! TTTTTTGGCAAATTGGGGAA+GGG + Chr4:90421847-90421866 MsG0480023846.01.T01:intron 35.0%
AAATTTGGCCTCCATCAATG+GGG - Chr4:90422712-90422731 None:intergenic 40.0%
AACAAATACCCCATTGATGG+AGG + Chr4:90422701-90422720 MsG0480023846.01.T01:intron 40.0%
AACTAAGGGACTGTTTGGAT+TGG - Chr4:90420810-90420829 None:intergenic 40.0%
AATCCCGATCAAGAAGATGA+AGG - Chr4:90424652-90424671 None:intergenic 40.0%
ACACTTTATTGATCTTGGGG+GGG - Chr4:90424016-90424035 None:intergenic 40.0%
ACATCAGATCTAACGGTTGT+TGG + Chr4:90423138-90423157 MsG0480023846.01.T01:intron 40.0%
ACCCCACTTATTCACCTTAA+AGG - Chr4:90424862-90424881 None:intergenic 40.0%
ACTACTTAACTCCCCAGATT+TGG - Chr4:90423106-90423125 None:intergenic 40.0%
AGAAAGAAATGCTCACCATC+CGG - Chr4:90421504-90421523 None:intergenic 40.0%
AGAAATCAACAGTTAGGGTG+AGG + Chr4:90423019-90423038 MsG0480023846.01.T01:intron 40.0%
AGTCAGAGAGAAAATAGGAG+GGG - Chr4:90421930-90421949 None:intergenic 40.0%
ATCTAACGGTTGTTGGTACA+AGG + Chr4:90423145-90423164 MsG0480023846.01.T01:intron 40.0%
CAAAAAAGTTCATGACCGGA+TGG + Chr4:90421486-90421505 MsG0480023846.01.T01:CDS 40.0%
CAAACAGTCCCTTAGTTTCA+GGG + Chr4:90420813-90420832 MsG0480023846.01.T01:intron 40.0%
CAAATTTGGCCTCCATCAAT+GGG - Chr4:90422713-90422732 None:intergenic 40.0%
CAATCACCTTCTACATTACC+TGG + Chr4:90423878-90423897 MsG0480023846.01.T01:intron 40.0%
CACAAAATGAATGAACCACC+AGG - Chr4:90423899-90423918 None:intergenic 40.0%
CGACACTTTATTGATCTTGG+GGG - Chr4:90424018-90424037 None:intergenic 40.0%
CTAGAGCTAAGAACTAGCAT+TGG - Chr4:90420936-90420955 None:intergenic 40.0%
CTTCCCCAATTTGCCAAAAA+AGG - Chr4:90421848-90421867 None:intergenic 40.0%
GACACTTTATTGATCTTGGG+GGG - Chr4:90424017-90424036 None:intergenic 40.0%
GAGCTTAGCTCAGTTTGTAA+GGG - Chr4:90424928-90424947 None:intergenic 40.0%
GAGTCAGAGAGAAAATAGGA+GGG - Chr4:90421931-90421950 None:intergenic 40.0%
GAGTCCGTGATCATATTCAT+AGG + Chr4:90422804-90422823 MsG0480023846.01.T01:intron 40.0%
GATTTATCGTCGACCATAAC+TGG - Chr4:90420332-90420351 None:intergenic 40.0%
GCAGACATTGAGAATGTTAC+AGG - Chr4:90421994-90422013 None:intergenic 40.0%
GTTCGAGTCAGAGAGAAAAT+AGG - Chr4:90421935-90421954 None:intergenic 40.0%
TAAACTTCTTGGTCAGGTCT+TGG + Chr4:90424609-90424628 MsG0480023846.01.T01:intron 40.0%
TACAAACTGAGCTAAGCTCA+TGG + Chr4:90424929-90424948 MsG0480023846.01.T01:intron 40.0%
TCTCCGATCTATGTTCATCT+TGG + Chr4:90423931-90423950 MsG0480023846.01.T01:intron 40.0%
TGAGCTTAGCTCAGTTTGTA+AGG - Chr4:90424929-90424948 None:intergenic 40.0%
TGATGTGAAAGTAAAGGTCC+TGG - Chr4:90422018-90422037 None:intergenic 40.0%
TGGTAAGTGCTTCTGTTGTA+TGG + Chr4:90423966-90423985 MsG0480023846.01.T01:intron 40.0%
TGTTAAGGCAACAAACCATG+AGG - Chr4:90423566-90423585 None:intergenic 40.0%
TTCCAAAGTTGTTCAGAGCT+GGG + Chr4:90421460-90421479 MsG0480023846.01.T01:CDS 40.0%
TTTCCAAAGTTGTTCAGAGC+TGG + Chr4:90421459-90421478 MsG0480023846.01.T01:CDS 40.0%
! CATTTTCCACCACTTTGTGT+GGG + Chr4:90422536-90422555 MsG0480023846.01.T01:intron 40.0%
! CTGGTGGTTCATTCATTTTG+TGG + Chr4:90423897-90423916 MsG0480023846.01.T01:intron 40.0%
! GTAAGAGAAGTGTGGAAGAT+TGG + Chr4:90422928-90422947 MsG0480023846.01.T01:intron 40.0%
! TCGGGATTTTCATGTCATCA+TGG + Chr4:90424664-90424683 MsG0480023846.01.T01:CDS 40.0%
!! AAGGTGAATTTCTAGCCACT+AGG - Chr4:90424843-90424862 None:intergenic 40.0%
!! ACAAAAGCACAGTTTTCTGC+AGG - Chr4:90421615-90421634 None:intergenic 40.0%
!! CGTTTCAAGTTTCGCAAAAC+TGG - Chr4:90420285-90420304 None:intergenic 40.0%
!! CTTTTGGTTGGACCTTTTTC+TGG - Chr4:90424479-90424498 None:intergenic 40.0%
!! GGCTTGTGAATTTTGATCTG+TGG - Chr4:90425042-90425061 None:intergenic 40.0%
!! GTTTTGAACGGAGTCTACAA+CGG + Chr4:90420220-90420239 MsG0480023846.01.T01:five_prime_UTR 40.0%
!! TGTGAATTTTGATCTGTGGC+AGG - Chr4:90425038-90425057 None:intergenic 40.0%
!!! CTTTTTTGGCAAATTGGGGA+AGG + Chr4:90421846-90421865 MsG0480023846.01.T01:intron 40.0%
!!! GTAGAGGACATACCCTTTTT+TGG + Chr4:90421832-90421851 MsG0480023846.01.T01:intron 40.0%
AAGATGTTGCCAAACACACC+TGG - Chr4:90424792-90424811 None:intergenic 45.0%
AATGCATATTCACCCACACG+TGG - Chr4:90425092-90425111 None:intergenic 45.0%
ACATACCATAGAGCCAGCAT+TGG + Chr4:90421163-90421182 MsG0480023846.01.T01:intron 45.0%
ACGTGTGGGTGAATATGCAT+TGG + Chr4:90425091-90425110 MsG0480023846.01.T01:CDS 45.0%
ACTTTATTGATCTTGGGGGG+GGG - Chr4:90424014-90424033 None:intergenic 45.0%
AGAACCTCTCGCTGCAAATT+TGG - Chr4:90422727-90422746 None:intergenic 45.0%
AGAGAGAAAATAGGAGGGGT+CGG - Chr4:90421926-90421945 None:intergenic 45.0%
ATAGAACCCACACAAAGTGG+TGG - Chr4:90422545-90422564 None:intergenic 45.0%
ATCATTCGACATCCACGTGT+GGG + Chr4:90425077-90425096 MsG0480023846.01.T01:CDS 45.0%
ATGTTACCTACTGGATGCCA+TGG + Chr4:90424550-90424569 MsG0480023846.01.T01:intron 45.0%
ATTAGTGCTGCGATATCACC+AGG + Chr4:90424771-90424790 MsG0480023846.01.T01:CDS 45.0%
CACTTTATTGATCTTGGGGG+GGG - Chr4:90424015-90424034 None:intergenic 45.0%
CCAAACAGTCCCTTAGTTTC+AGG + Chr4:90420812-90420831 MsG0480023846.01.T01:intron 45.0%
CCTGAAACTAAGGGACTGTT+TGG - Chr4:90420815-90420834 None:intergenic 45.0%
CGAGTCAGAGAGAAAATAGG+AGG - Chr4:90421932-90421951 None:intergenic 45.0%
CGATCAGCAATTGACAACAC+TGG - Chr4:90420969-90420988 None:intergenic 45.0%
CGTGTGGGTGAATATGCATT+GGG + Chr4:90425092-90425111 MsG0480023846.01.T01:CDS 45.0%
CTTCTGCCCGGAAAAATCAA+AGG + Chr4:90422056-90422075 MsG0480023846.01.T01:intron 45.0%
GAACCACCAGGTAATGTAGA+AGG - Chr4:90423887-90423906 None:intergenic 45.0%
GACATTCTATGCAAGCTTGC+AGG - Chr4:90423512-90423531 None:intergenic 45.0%
GCAAATTTGGCCTCCATCAA+TGG - Chr4:90422714-90422733 None:intergenic 45.0%
GGATAACTAATGCCAGGCTT+AGG - Chr4:90421355-90421374 None:intergenic 45.0%
GGGAATTATTCACGCTGTGA+TGG + Chr4:90422764-90422783 MsG0480023846.01.T01:intron 45.0%
GTTACTGCAGCTGCAAGTAA+AGG + Chr4:90422892-90422911 MsG0480023846.01.T01:intron 45.0%
GTTGTTGGTACAAGGTGAAC+TGG + Chr4:90423153-90423172 MsG0480023846.01.T01:intron 45.0%
TAAGCACTTGCGTGACTGTT+CGG - Chr4:90420763-90420782 None:intergenic 45.0%
TCACCTTCTACATTACCTGG+TGG + Chr4:90423881-90423900 MsG0480023846.01.T01:intron 45.0%
TGCAGAAGAAGCGAAGCAAA+AGG + Chr4:90420249-90420268 MsG0480023846.01.T01:intron 45.0%
TGCATAATATATGCAGGGGC+CGG - Chr4:90424901-90424920 None:intergenic 45.0%
TGCCCGGAAAAATCAAAGGA+AGG + Chr4:90422060-90422079 MsG0480023846.01.T01:intron 45.0%
TTATCGTCGACCATAACTGG+AGG - Chr4:90420329-90420348 None:intergenic 45.0%
! CGAAGAAGGTTTGGAAGCAT+TGG - Chr4:90420423-90420442 None:intergenic 45.0%
! GCATTTTCCACCACTTTGTG+TGG + Chr4:90422535-90422554 MsG0480023846.01.T01:intron 45.0%
! TGATTTTTCCGGGCAGAAGA+CGG - Chr4:90422055-90422074 None:intergenic 45.0%
!! AAGGTTTGGAAGCATTGGAG+TGG - Chr4:90420418-90420437 None:intergenic 45.0%
!! AGGAGCAGTTTTGGTAGATG+GGG + Chr4:90423039-90423058 MsG0480023846.01.T01:intron 45.0%
!! ATGAACCAATGCTGGCTCTA+TGG - Chr4:90421171-90421190 None:intergenic 45.0%
!! GAGGAGCAGTTTTGGTAGAT+GGG + Chr4:90423038-90423057 MsG0480023846.01.T01:intron 45.0%
!! GTTATTTGTTGTGGTGGCTG+TGG + Chr4:90422839-90422858 MsG0480023846.01.T01:intron 45.0%
!! TGAGGAGCAGTTTTGGTAGA+TGG + Chr4:90423037-90423056 MsG0480023846.01.T01:intron 45.0%
!! TAAAATTAAAAAATCAAAAA+AGG - Chr4:90423783-90423802 None:intergenic 5.0%
AAAACCATGTCCGTGCCTCA+TGG + Chr4:90423548-90423567 MsG0480023846.01.T01:CDS 50.0%
AACCTGAAGGACAACAGACG+AGG - Chr4:90425126-90425145 None:intergenic 50.0%
AAGCACTTGCGTGACTGTTC+GGG - Chr4:90420762-90420781 None:intergenic 50.0%
ACATTCTCAATGTCTGCGCC+AGG + Chr4:90421997-90422016 MsG0480023846.01.T01:intron 50.0%
ACTTGAAACGGCGTCGTTGA+TGG + Chr4:90420295-90420314 MsG0480023846.01.T01:exon 50.0%
AGGCAACAAACCATGAGGCA+CGG - Chr4:90423561-90423580 None:intergenic 50.0%
ATGCTACCATGGCATCCAGT+AGG - Chr4:90424559-90424578 None:intergenic 50.0%
CAACGCTGATCTAGTTGCAC+GGG - Chr4:90421971-90421990 None:intergenic 50.0%
CACACGTGGATGTCGAATGA+TGG - Chr4:90425078-90425097 None:intergenic 50.0%
CATAATATATGCAGGGGCCG+GGG - Chr4:90424899-90424918 None:intergenic 50.0%
CATCATTCGACATCCACGTG+TGG + Chr4:90425076-90425095 MsG0480023846.01.T01:CDS 50.0%
CTTTATTGATCTTGGGGGGG+GGG - Chr4:90424013-90424032 None:intergenic 50.0%
GCAACGCTGATCTAGTTGCA+CGG - Chr4:90421972-90421991 None:intergenic 50.0%
GCATAATATATGCAGGGGCC+GGG - Chr4:90424900-90424919 None:intergenic 50.0%
GCGATATCACCAGGTGTGTT+TGG + Chr4:90424780-90424799 MsG0480023846.01.T01:intron 50.0%
GGAGGAAGACGAAGAAGGTT+TGG - Chr4:90420432-90420451 None:intergenic 50.0%
GGGTTGGAGGAAGTAACCAA+GGG + Chr4:90422866-90422885 MsG0480023846.01.T01:intron 50.0%
GGTTCTTCCTCCTCCAGTTA+TGG + Chr4:90420316-90420335 MsG0480023846.01.T01:CDS 50.0%
TCTAAGAGAATGCGCGTGGA+GGG + Chr4:90422744-90422763 MsG0480023846.01.T01:intron 50.0%
TGATCAGATCACGGCGAGAT+TGG + Chr4:90422972-90422991 MsG0480023846.01.T01:intron 50.0%
! AGGTGAATAAGTGGGGTGTC+CGG + Chr4:90424865-90424884 MsG0480023846.01.T01:intron 50.0%
! GCACGGACATGGTTTTCAAC+TGG - Chr4:90423544-90423563 None:intergenic 50.0%
! GTTAGGGTGAGGAGCAGTTT+TGG + Chr4:90423030-90423049 MsG0480023846.01.T01:intron 50.0%
! TTCTAAGAGAATGCGCGTGG+AGG + Chr4:90422743-90422762 MsG0480023846.01.T01:intron 50.0%
!! AGGTTCTAAGAGAATGCGCG+TGG + Chr4:90422740-90422759 MsG0480023846.01.T01:intron 50.0%
!! GGAGCAGTTTTGGTAGATGG+GGG + Chr4:90423040-90423059 MsG0480023846.01.T01:intron 50.0%
!! GTTTTGGTAGATGGGGGAAG+AGG + Chr4:90423046-90423065 MsG0480023846.01.T01:intron 50.0%
!! TGCCCAGCTCTGAACAACTT+TGG - Chr4:90421465-90421484 None:intergenic 50.0%
!! TTTTGGGTCAAGCAGCCTAG+TGG + Chr4:90424825-90424844 MsG0480023846.01.T01:intron 50.0%
ACGGAGGAGGAAGACGAAGA+AGG - Chr4:90420437-90420456 None:intergenic 55.0%
ATGGTTGGGTGCATCTGTCC+TGG + Chr4:90424683-90424702 MsG0480023846.01.T01:CDS 55.0%
CAAACCATGAGGCACGGACA+TGG - Chr4:90423555-90423574 None:intergenic 55.0%
CACCTCGTCTGTTGTCCTTC+AGG + Chr4:90425121-90425140 MsG0480023846.01.T01:CDS 55.0%
CAGCTGCAGTAACACACCCT+TGG - Chr4:90422885-90422904 None:intergenic 55.0%
CTGATCTAGTTGCACGGGTG+GGG - Chr4:90421966-90421985 None:intergenic 55.0%
CTTATCCCCGTCGCTAATGC+CGG + Chr4:90420389-90420408 MsG0480023846.01.T01:CDS 55.0%
CTTTGACCACTCCTCCACCA+CGG - Chr4:90423001-90423020 None:intergenic 55.0%
GAGGCCAAATTTGCAGCGAG+AGG + Chr4:90422720-90422739 MsG0480023846.01.T01:intron 55.0%
GCTGATCTAGTTGCACGGGT+GGG - Chr4:90421967-90421986 None:intergenic 55.0%
GGGGTTGGAGGAAGTAACCA+AGG + Chr4:90422865-90422884 MsG0480023846.01.T01:intron 55.0%
GTGCATCTGTCCTGGGACTT+GGG + Chr4:90424691-90424710 MsG0480023846.01.T01:CDS 55.0%
TAAACCACTCCCCAAGTCCC+AGG - Chr4:90424704-90424723 None:intergenic 55.0%
TCAGATCACGGCGAGATTGG+TGG + Chr4:90422975-90422994 MsG0480023846.01.T01:intron 55.0%
TCCTCCTCCGTTCATCATGC+CGG + Chr4:90420446-90420465 MsG0480023846.01.T01:CDS 55.0%
TCGTCGACCATAACTGGAGG+AGG - Chr4:90420326-90420345 None:intergenic 55.0%
TGAATCCCTAACCTCACGGC+CGG - Chr4:90420468-90420487 None:intergenic 55.0%
TGCATCTGTCCTGGGACTTG+GGG + Chr4:90424692-90424711 MsG0480023846.01.T01:CDS 55.0%
TGGTTGGGTGCATCTGTCCT+GGG + Chr4:90424684-90424703 MsG0480023846.01.T01:CDS 55.0%
TGTTGTGGTGGCTGTGGTGT+GGG + Chr4:90422845-90422864 MsG0480023846.01.T01:intron 55.0%
TTGTTGTGGTGGCTGTGGTG+TGG + Chr4:90422844-90422863 MsG0480023846.01.T01:intron 55.0%
! GGTGAATAAGTGGGGTGTCC+GGG + Chr4:90424866-90424885 MsG0480023846.01.T01:intron 55.0%
! GTGAATAAGTGGGGTGTCCG+GGG + Chr4:90424867-90424886 MsG0480023846.01.T01:intron 55.0%
! TTTTCCGGGCAGAAGACGGT+GGG - Chr4:90422051-90422070 None:intergenic 55.0%
! TTTTTCCGGGCAGAAGACGG+TGG - Chr4:90422052-90422071 None:intergenic 55.0%
AAGTCCCACCGTCTTCTGCC+CGG + Chr4:90422044-90422063 MsG0480023846.01.T01:intron 60.0%
ATCATGCCGGCCGTGAGGTT+AGG + Chr4:90420459-90420478 MsG0480023846.01.T01:intron 60.0%
ATTGATCTTGGGGGGGGGGT+GGG - Chr4:90424009-90424028 None:intergenic 60.0%
CGCTGATCTAGTTGCACGGG+TGG - Chr4:90421968-90421987 None:intergenic 60.0%
CTCACGGCCGGCATGATGAA+CGG - Chr4:90420456-90420475 None:intergenic 60.0%
CTGCCGCTGACGACAGTAGA+GGG - Chr4:90420356-90420375 None:intergenic 60.0%
GGTGCATCTGTCCTGGGACT+TGG + Chr4:90424690-90424709 MsG0480023846.01.T01:CDS 60.0%
GTTGTGGTGGCTGTGGTGTG+GGG + Chr4:90422846-90422865 MsG0480023846.01.T01:intron 60.0%
TAGTTGCACGGGTGGGGTTG+TGG - Chr4:90421960-90421979 None:intergenic 60.0%
TATTGATCTTGGGGGGGGGG+TGG - Chr4:90424010-90424029 None:intergenic 60.0%
TCATGCCGGCCGTGAGGTTA+GGG + Chr4:90420460-90420479 MsG0480023846.01.T01:intron 60.0%
TCCCCCTCTACTGTCGTCAG+CGG + Chr4:90420350-90420369 MsG0480023846.01.T01:CDS 60.0%
TCTGCCGCTGACGACAGTAG+AGG - Chr4:90420357-90420376 None:intergenic 60.0%
TGCCGCTGACGACAGTAGAG+GGG - Chr4:90420355-90420374 None:intergenic 60.0%
!! GGAAGCATTGGAGTGGTCGC+CGG - Chr4:90420411-90420430 None:intergenic 60.0%
ACGGCCGGCATGATGAACGG+AGG - Chr4:90420453-90420472 None:intergenic 65.0%
CGTTCATCATGCCGGCCGTG+AGG + Chr4:90420454-90420473 MsG0480023846.01.T01:CDS 65.0%
CTGTCCTGGGACTTGGGGAG+TGG + Chr4:90424697-90424716 MsG0480023846.01.T01:CDS 65.0%
GCCGCTGACGACAGTAGAGG+GGG - Chr4:90420354-90420373 None:intergenic 65.0%
GCCGGCATGATGAACGGAGG+AGG - Chr4:90420450-90420469 None:intergenic 65.0%
GGTGTCCGGGGTTCAAACCC+CGG + Chr4:90424879-90424898 MsG0480023846.01.T01:intron 65.0%
GTGGTCGCCGGCATTAGCGA+CGG - Chr4:90420399-90420418 None:intergenic 65.0%
TGGCTGTGGTGTGGGGTTGG+AGG + Chr4:90422853-90422872 MsG0480023846.01.T01:intron 65.0%
TGGTCGCCGGCATTAGCGAC+GGG - Chr4:90420398-90420417 None:intergenic 65.0%
TGGTGGCTGTGGTGTGGGGT+TGG + Chr4:90422850-90422869 MsG0480023846.01.T01:intron 65.0%
TTGCACGGGTGGGGTTGTGG+TGG - Chr4:90421957-90421976 None:intergenic 65.0%
! GAGATTGGTGGCCGTGGTGG+AGG + Chr4:90422987-90423006 MsG0480023846.01.T01:intron 65.0%
AGGGGCCGGGGTTTGAACCC+CGG - Chr4:90424887-90424906 None:intergenic 70.0%
GGTCGCCGGCATTAGCGACG+GGG - Chr4:90420397-90420416 None:intergenic 70.0%
! CACGGCGAGATTGGTGGCCG+TGG + Chr4:90422981-90423000 MsG0480023846.01.T01:intron 70.0%
! GGCGAGATTGGTGGCCGTGG+TGG + Chr4:90422984-90423003 MsG0480023846.01.T01:intron 70.0%
! TGGTGGCCGTGGTGGAGGAG+TGG + Chr4:90422992-90423011 MsG0480023846.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 90420207 90425151 90420207 ID=MsG0480023846.01;Name=MsG0480023846.01
Chr4 mRNA 90420207 90425151 90420207 ID=MsG0480023846.01.T01;Parent=MsG0480023846.01;Name=MsG0480023846.01.T01;_AED=0.49;_eAED=0.54;_QI=83|0.6|0.66|1|0.2|0.33|6|0|185
Chr4 exon 90420207 90420246 90420207 ID=MsG0480023846.01.T01:exon:7545;Parent=MsG0480023846.01.T01
Chr4 exon 90420271 90420475 90420271 ID=MsG0480023846.01.T01:exon:7546;Parent=MsG0480023846.01.T01
Chr4 five_prime_UTR 90420207 90420246 90420207 ID=MsG0480023846.01.T01:five_prime_utr;Parent=MsG0480023846.01.T01
Chr4 five_prime_UTR 90420271 90420313 90420271 ID=MsG0480023846.01.T01:five_prime_utr;Parent=MsG0480023846.01.T01
Chr4 CDS 90420314 90420475 90420314 ID=MsG0480023846.01.T01:cds;Parent=MsG0480023846.01.T01
Chr4 CDS 90421455 90421507 90421455 ID=MsG0480023846.01.T01:cds;Parent=MsG0480023846.01.T01
Chr4 CDS 90423502 90423569 90423502 ID=MsG0480023846.01.T01:cds;Parent=MsG0480023846.01.T01
Chr4 CDS 90424625 90424792 90424625 ID=MsG0480023846.01.T01:cds;Parent=MsG0480023846.01.T01
Chr4 CDS 90425045 90425151 90425045 ID=MsG0480023846.01.T01:cds;Parent=MsG0480023846.01.T01
Chr4 mRNA 90420236 90425151 90420236 ID=MsG0480023846.01.T02;Parent=MsG0480023846.01;Name=MsG0480023846.01.T02;_AED=0.49;_eAED=0.54;_QI=78|0.5|0.6|1|0.25|0.6|5|0|185
Chr4 exon 90420236 90420475 90420236 ID=MsG0480023846.01.T02:exon:7551;Parent=MsG0480023846.01.T02
Chr4 five_prime_UTR 90420236 90420313 90420236 ID=MsG0480023846.01.T02:five_prime_utr;Parent=MsG0480023846.01.T02
Chr4 CDS 90420314 90420475 90420314 ID=MsG0480023846.01.T02:cds;Parent=MsG0480023846.01.T02
Chr4 CDS 90421455 90421507 90421455 ID=MsG0480023846.01.T02:cds;Parent=MsG0480023846.01.T02
Chr4 CDS 90423502 90423569 90423502 ID=MsG0480023846.01.T02:cds;Parent=MsG0480023846.01.T02
Chr4 CDS 90424625 90424792 90424625 ID=MsG0480023846.01.T02:cds;Parent=MsG0480023846.01.T02
Chr4 CDS 90425045 90425151 90425045 ID=MsG0480023846.01.T02:cds;Parent=MsG0480023846.01.T02
Gene Sequence

>MsG0480023846.01.T01

ATGGTTCTTCCTCCTCCAGTTATGGTCGACGATAAATCCCCCTCTACTGTCGTCAGCGGCAGAGATCGAGAGCTTCTTATCCCCGTCGCTAATGCCGGCGACCACTCCAATGCTTCCAAACCTTCTTCGTCTTCCTCCTCCGTTCATCATGCCGGCCGTGAGACTTTTTCCAAAGTTGTTCAGAGCTGGGCATCAAAAAAGTTCATGACCGGATGCGTTCTTCCTGCAAGCTTGCATAGAATGTCTGTTACTGTCCAGTTGAAAACCATGTCCGTGCCTCATGGTCTTGGATTCATAACTTCCATAACCTTCATCTTCTTGATCGGGATTTTCATGTCATCATGGTTGGGTGCATCTGTCCTGGGACTTGGGGAGTGGTTTATCAAGAGAATGCCTCTTGTTCGTCATATCTATAATGCTTCTAAGCAGATTAGTGCTGCGATATCACCAGATCAAAATTCACAAGCCTTCAAAGAAGTAGCCATCATTCGACATCCACGTGTGGGTGAATATGCATTGGGATTCATCACCTCGTCTGTTGTCCTTCAGGTTTCTTAA

>MsG0480023846.01.T02

ATGGTTCTTCCTCCTCCAGTTATGGTCGACGATAAATCCCCCTCTACTGTCGTCAGCGGCAGAGATCGAGAGCTTCTTATCCCCGTCGCTAATGCCGGCGACCACTCCAATGCTTCCAAACCTTCTTCGTCTTCCTCCTCCGTTCATCATGCCGGCCGTGAGACTTTTTCCAAAGTTGTTCAGAGCTGGGCATCAAAAAAGTTCATGACCGGATGCGTTCTTCCTGCAAGCTTGCATAGAATGTCTGTTACTGTCCAGTTGAAAACCATGTCCGTGCCTCATGGTCTTGGATTCATAACTTCCATAACCTTCATCTTCTTGATCGGGATTTTCATGTCATCATGGTTGGGTGCATCTGTCCTGGGACTTGGGGAGTGGTTTATCAAGAGAATGCCTCTTGTTCGTCATATCTATAATGCTTCTAAGCAGATTAGTGCTGCGATATCACCAGATCAAAATTCACAAGCCTTCAAAGAAGTAGCCATCATTCGACATCCACGTGTGGGTGAATATGCATTGGGATTCATCACCTCGTCTGTTGTCCTTCAGGTTTCTTAA
Protein sequence

>MsG0480023846.01.T01

MVLPPPVMVDDKSPSTVVSGRDRELLIPVANAGDHSNASKPSSSSSSVHHAGRETFSKVVQSWASKKFMTGCVLPASLHRMSVTVQLKTMSVPHGLGFITSITFIFLIGIFMSSWLGASVLGLGEWFIKRMPLVRHIYNASKQISAAISPDQNSQAFKEVAIIRHPRVGEYALGFITSSVVLQVS*

>MsG0480023846.01.T02

MVLPPPVMVDDKSPSTVVSGRDRELLIPVANAGDHSNASKPSSSSSSVHHAGRETFSKVVQSWASKKFMTGCVLPASLHRMSVTVQLKTMSVPHGLGFITSITFIFLIGIFMSSWLGASVLGLGEWFIKRMPLVRHIYNASKQISAAISPDQNSQAFKEVAIIRHPRVGEYALGFITSSVVLQVS*