AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017014.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017014.01.T01 MTR_3g099380 83.550 231 32 3 53 280 33 260 5.03e-132 374
MsG0380017014.01.T01 MTR_5g064580 76.190 231 49 3 53 280 33 260 2.52e-119 342
MsG0380017014.01.T01 MTR_3g100620 66.667 198 64 1 68 263 50 247 8.62e-92 272
MsG0380017014.01.T01 MTR_2g091225 72.393 163 45 0 108 270 62 224 3.64e-87 260
MsG0380017014.01.T01 MTR_2g091225 72.393 163 45 0 108 270 85 247 4.81e-87 260
MsG0380017014.01.T01 MTR_3g099380 78.161 174 32 3 53 223 33 203 6.41e-87 258
MsG0380017014.01.T01 MTR_8g086270 73.006 163 44 0 108 270 85 247 2.52e-86 258
MsG0380017014.01.T01 MTR_2g015980 70.000 170 49 2 108 276 83 251 1.94e-83 251
MsG0380017014.01.T01 MTR_4g083060 67.442 172 56 0 107 278 84 255 1.15e-82 250
MsG0380017014.01.T01 MTR_5g044160 70.370 162 48 0 107 268 84 245 1.48e-81 246
MsG0380017014.01.T01 MTR_2g076960 57.143 210 88 1 68 275 44 253 1.30e-80 244
MsG0380017014.01.T01 MTR_0137s0020 53.061 196 91 1 68 263 50 244 1.08e-65 206
MsG0380017014.01.T01 MTR_3g014060 52.551 196 92 1 68 263 50 244 4.25e-65 204
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017014.01.T01 AT1G78300 75.862 232 49 4 53 280 30 258 7.51e-117 336
MsG0380017014.01.T01 AT1G35160 88.068 176 20 1 106 280 89 264 7.13e-112 324
MsG0380017014.01.T01 AT4G09000 86.592 179 20 1 106 280 88 266 1.15e-108 315
MsG0380017014.01.T01 AT1G35160 75.980 204 20 2 106 280 89 292 1.40e-105 309
MsG0380017014.01.T01 AT5G38480 84.302 172 26 1 106 277 82 252 5.36e-104 303
MsG0380017014.01.T01 AT4G09000 90.446 157 15 0 106 262 88 244 4.55e-102 301
MsG0380017014.01.T01 AT3G02520 82.857 175 28 2 106 278 83 257 4.57e-102 299
MsG0380017014.01.T01 AT3G02520 82.857 175 28 2 106 278 83 257 4.57e-102 299
MsG0380017014.01.T01 AT5G38480 68.860 228 63 5 53 277 29 251 1.27e-101 297
MsG0380017014.01.T01 AT5G38480 68.860 228 63 5 53 277 29 251 1.27e-101 297
MsG0380017014.01.T01 AT5G16050 81.356 177 30 1 106 279 85 261 6.43e-101 296
MsG0380017014.01.T01 AT5G16050 81.356 177 30 1 106 279 85 261 6.43e-101 296
MsG0380017014.01.T01 AT5G10450 68.657 201 61 1 68 266 46 246 2.82e-97 286
MsG0380017014.01.T01 AT5G10450 68.687 198 60 1 68 263 46 243 1.06e-96 285
MsG0380017014.01.T01 AT5G10450 66.505 206 67 1 68 271 46 251 3.54e-96 284
MsG0380017014.01.T01 AT5G10450 69.036 197 59 1 68 262 46 242 6.26e-96 283
MsG0380017014.01.T01 AT5G65430 67.662 201 63 1 68 266 46 246 1.79e-95 281
MsG0380017014.01.T01 AT5G65430 67.677 198 62 1 68 263 46 243 6.35e-95 280
MsG0380017014.01.T01 AT5G65430 68.020 197 61 1 68 262 46 242 6.48e-94 278
MsG0380017014.01.T01 AT1G26480 70.349 172 50 1 108 278 88 259 1.09e-84 254
MsG0380017014.01.T01 AT2G42590 72.050 161 45 0 108 268 85 245 5.23e-83 250
MsG0380017014.01.T01 AT2G42590 72.050 161 45 0 108 268 85 245 7.61e-83 250
MsG0380017014.01.T01 AT2G42590 72.500 160 44 0 108 267 85 244 1.33e-82 249
MsG0380017014.01.T01 AT1G34760 71.519 158 45 0 108 265 83 240 3.03e-80 243
MsG0380017014.01.T01 AT1G34760 71.519 158 45 0 108 265 83 240 3.81e-80 243
MsG0380017014.01.T01 AT1G22300 55.869 213 92 1 68 278 41 253 9.58e-75 229
MsG0380017014.01.T01 AT1G22300 55.869 213 92 1 68 278 41 253 1.15e-74 229
MsG0380017014.01.T01 AT1G22300 57.214 201 84 1 68 266 41 241 2.79e-73 225
MsG0380017014.01.T01 AT1G78220 44.068 177 96 2 86 259 59 235 6.57e-45 152
MsG0380017014.01.T01 AT1G22290 41.985 131 56 4 108 237 87 198 1.04e-22 93.6
MsG0380017014.01.T01 AT1G22290 41.406 128 55 4 108 234 87 195 2.65e-22 92.0
MsG0380017014.01.T01 AT2G10450 71.429 49 14 0 227 275 16 64 1.21e-18 79.0

Find 95 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGCTTGTTGCCAATCTCTT+TGG 0.214735 3:+90728783 MsG0380017014.01.T01:three_prime_UTR
AAACTTGATCTCGCCGAATT+TGG 0.226216 3:+90728973 MsG0380017014.01.T01:three_prime_UTR
AGAGCAAGACCCAGCCTAAT+TGG 0.274942 3:-90727600 None:intergenic
TTCATGTCTGTTATGAGTTC+TGG 0.280155 3:+90728824 MsG0380017014.01.T01:three_prime_UTR
TGCTTGTTGCCAATCTCTTT+GGG 0.288401 3:+90728784 MsG0380017014.01.T01:three_prime_UTR
AGGAGAAGTTTGATCCTAAT+TGG 0.291226 3:-90728733 None:intergenic
CTCATTCCTTCCGCTGCTTC+CGG 0.316176 3:+90727098 MsG0380017014.01.T01:CDS
ACGGTGAGTTTCTTCGTTAT+CGG 0.326928 3:-90726871 None:intergenic
TAATATCCGCTCACCAAATT+CGG 0.339022 3:-90728986 None:intergenic
TGATGAAGCAATTGCTGAAC+TGG 0.341177 3:+90728456 MsG0380017014.01.T01:CDS
TTCAGTGTCCTCAAGAAAAT+AGG 0.346803 3:-90728903 None:intergenic
TACTGCTGTTCATCGGGTTT+AGG 0.348488 3:-90728696 None:intergenic
CGAAGAAATGGTGGAGTTCA+TGG 0.350821 3:+90726831 MsG0380017014.01.T01:CDS
AACCTGTTTAGCAAGATTGC+AGG 0.360144 3:-90727670 None:intergenic
CTTCATTCATTAACATATAG+AGG 0.370439 3:-90728753 None:intergenic
GTTATGAGTTCTGGATGTCC+TGG 0.372021 3:+90728833 MsG0380017014.01.T01:three_prime_UTR
CACCATTTCTTCGTAGCGTT+CGG 0.376229 3:-90726821 None:intergenic
TGCTCCGATGACGTTCTTGT+AGG 0.378815 3:-90726920 None:intergenic
TTCGTAGCGTTCGGCTTGTT+CGG 0.387733 3:-90726812 None:intergenic
TGCCTGCAATCTTGCTAAAC+AGG 0.391731 3:+90727668 MsG0380017014.01.T01:CDS
GGTAATCTCCCTTCATCTTA+AGG 0.395416 3:-90727139 None:intergenic
CGCTGCTTCCGGTGATTCCA+AGG 0.396427 3:+90727109 MsG0380017014.01.T01:CDS
ACACAAGGATTCAGATGATT+AGG 0.402385 3:+90725278 MsG0380017014.01.T01:CDS
TTTGTTTGGTTTCAGGATGA+TGG 0.406229 3:+90728648 MsG0380017014.01.T01:intron
AGCCGAACGCTACGAAGAAA+TGG 0.413922 3:+90726819 MsG0380017014.01.T01:CDS
TTTGTTTACTGCTGTTCATC+GGG 0.421726 3:-90728702 None:intergenic
TTCTTCGTTATCGGCGTTGG+CGG 0.426813 3:-90726862 None:intergenic
TGCCACCAACTCATCCAATT+AGG 0.435904 3:+90727586 MsG0380017014.01.T01:CDS
GCAAGATTGCAGGCACGATC+AGG 0.442951 3:-90727660 None:intergenic
ATTATCACTTGTTATATTTG+AGG 0.443079 3:+90729050 MsG0380017014.01.T01:three_prime_UTR
TTATCACTTGTTATATTTGA+GGG 0.443479 3:+90729051 MsG0380017014.01.T01:three_prime_UTR
AGCTGCTTCTTTAATTTCAT+CGG 0.448476 3:-90728673 None:intergenic
ATCTCAGCACCCAAAGAGAT+TGG 0.450182 3:-90728793 None:intergenic
AGTTTCTTCGTTATCGGCGT+TGG 0.460492 3:-90726865 None:intergenic
ACCAACTCATCCAATTAGGC+TGG 0.462152 3:+90727590 MsG0380017014.01.T01:CDS
CTCAGCAGCCTCCTTACGCT+CGG 0.471405 3:-90727192 None:intergenic
CTCTATATGTTAATGAATGA+AGG 0.471694 3:+90728754 MsG0380017014.01.T01:three_prime_UTR
CCTGCATGTCAGAGGTCCAT+AGG 0.480592 3:-90728546 None:intergenic
ATTTGTTTACTGCTGTTCAT+CGG 0.482074 3:-90728703 None:intergenic
ATGGGTCATGAACTCGTGGT+AGG 0.488348 3:+90729018 MsG0380017014.01.T01:three_prime_UTR
TCGGAGCACGACGTGCTTCG+TGG 0.495843 3:+90726935 MsG0380017014.01.T01:CDS
CCCAGCCTAATTGGATGAGT+TGG 0.496782 3:-90727591 None:intergenic
CGCCGCTTACAAATCTGCTC+AGG 0.501140 3:+90727223 MsG0380017014.01.T01:CDS
CATCTTAAGGTAGAAAACCT+TGG 0.502188 3:-90727126 None:intergenic
CTCGGAAGAGAACGTTTACA+TGG 0.508188 3:+90726780 MsG0380017014.01.T01:CDS
CAAGACTGGCGCCGAGCGTA+AGG 0.509038 3:+90727181 MsG0380017014.01.T01:CDS
TTCCTCGATCGAACAGAAAG+AGG 0.515919 3:+90726966 MsG0380017014.01.T01:CDS
AGCCTAATTGGATGAGTTGG+TGG 0.523887 3:-90727588 None:intergenic
TTCGTGATAATCTCACCCTA+TGG 0.525895 3:+90728530 MsG0380017014.01.T01:CDS
TTATGAGTTCTGGATGTCCT+GGG 0.527707 3:+90728834 MsG0380017014.01.T01:three_prime_UTR
GTAGAAAACCTTGGAATCAC+CGG 0.533118 3:-90727117 None:intergenic
CCTATGGACCTCTGACATGC+AGG 0.534557 3:+90728546 MsG0380017014.01.T01:CDS
TGTTAATGAATGAAGGAAGA+AGG 0.545599 3:+90728761 MsG0380017014.01.T01:three_prime_UTR
CTGCATGTCAGAGGTCCATA+GGG 0.549120 3:-90728545 None:intergenic
AGCAGCGGAAGGAATGAGAC+GGG 0.550202 3:-90727093 None:intergenic
CATGTAAACGTTCTCTTCCG+AGG 0.552815 3:-90726779 None:intergenic
TGAACTCAGCAAGATACCTA+TGG 0.552878 3:-90727160 None:intergenic
TGGGTCATGAACTCGTGGTA+GGG 0.555219 3:+90729019 MsG0380017014.01.T01:three_prime_UTR
CTCCTCTTTCTGTTCGATCG+AGG 0.555820 3:-90726968 None:intergenic
AGAAACTCACCGTCGAAGAG+AGG 0.556409 3:+90726881 MsG0380017014.01.T01:CDS
TATCTTGCTGAGTTCAAGAC+TGG 0.559984 3:+90727167 MsG0380017014.01.T01:CDS
CTACCGATCTAAGATCGAAT+CGG 0.562157 3:+90727028 MsG0380017014.01.T01:CDS
CCTTGGCGAGGAATCATACA+AGG 0.572604 3:+90728483 MsG0380017014.01.T01:CDS
AGATCGGTAGTCACGGATGA+CGG 0.575327 3:-90727015 None:intergenic
GTAGCCTACAAGAACGTCAT+CGG 0.580177 3:+90726916 MsG0380017014.01.T01:CDS
ATTGCTGAACTGGATACCCT+TGG 0.584167 3:+90728466 MsG0380017014.01.T01:CDS
CTTGTATGATTCCTCGCCAA+GGG 0.586259 3:-90728482 None:intergenic
CCAACTCATCCAATTAGGCT+GGG 0.587390 3:+90727591 MsG0380017014.01.T01:CDS
CTTGGAATCACCGGAAGCAG+CGG 0.589029 3:-90727108 None:intergenic
CTCTCTCTAGAATTCAACAA+TGG 0.589732 3:+90726742 MsG0380017014.01.T01:intron
AAGCAGCGGAAGGAATGAGA+CGG 0.594104 3:-90727094 None:intergenic
GACTGGCGCCGAGCGTAAGG+AGG 0.597871 3:+90727184 MsG0380017014.01.T01:CDS
CCTTGTATGATTCCTCGCCA+AGG 0.605796 3:-90728483 None:intergenic
GAACGTGATCCTCGTTGCCG+CGG 0.607870 3:-90726993 None:intergenic
AGATGAAGGGAGATTACCAT+AGG 0.607967 3:+90727144 MsG0380017014.01.T01:CDS
GAGAAGGTTCCTCTCTTCGA+CGG 0.608781 3:-90726890 None:intergenic
GTTATATTTGAGGGAACTCG+TGG 0.620508 3:+90729060 MsG0380017014.01.T01:three_prime_UTR
TCTTGTAGGCTACAGAGAGA+AGG 0.628236 3:-90726906 None:intergenic
GAATCACCGGAAGCAGCGGA+AGG 0.629660 3:-90727104 None:intergenic
AGGACAAACTAAAACAGCCC+AGG 0.629679 3:-90728851 None:intergenic
GGGAAAACGAGGTGTTGTAG+AGG 0.634384 3:+90725252 MsG0380017014.01.T01:CDS
AATCAATACCTGCATGTCAG+AGG 0.637050 3:-90728554 None:intergenic
GCTCCGATTCGATCTTAGAT+CGG 0.641337 3:-90727031 None:intergenic
CGATCTTAGATCGGTAGTCA+CGG 0.645752 3:-90727022 None:intergenic
AGAGGAGAGCCGCGGCAACG+AGG 0.653525 3:+90726984 MsG0380017014.01.T01:CDS
ATCTCGCCGAATTTGGTGAG+CGG 0.654329 3:+90728980 MsG0380017014.01.T01:three_prime_UTR
TGGCGGCCGCTCATTCACCT+CGG 0.657447 3:+90726762 MsG0380017014.01.T01:CDS
GAGCTTTCTAACATCTGTGA+CGG 0.658608 3:+90727050 MsG0380017014.01.T01:CDS
TCTCTAGAATTCAACAATGG+CGG 0.659956 3:+90726745 MsG0380017014.01.T01:intron
GAACAGAAAGAGGAGAGCCG+CGG 0.660532 3:+90726976 MsG0380017014.01.T01:CDS
AACCTGAGCAGATTTGTAAG+CGG 0.663795 3:-90727225 None:intergenic
TGAACTGGATACCCTTGGCG+AGG 0.679766 3:+90728471 MsG0380017014.01.T01:CDS
CGAACGCTACGAAGAAATGG+TGG 0.680192 3:+90726822 MsG0380017014.01.T01:CDS
TCTCTTCCGAGGTGAATGAG+CGG 0.699062 3:-90726768 None:intergenic
GTGTTGTAGAGGTCAACACA+AGG 0.707649 3:+90725263 MsG0380017014.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAATTAAAGTTGTAT+TGG - Chr3:90725953-90725972 None:intergenic 10.0%
!! TTTGAATTATTAATACTTAT+TGG - Chr3:90726523-90726542 None:intergenic 10.0%
!!! ATATTAAAAATTTCTTTTTG+TGG - Chr3:90726484-90726503 None:intergenic 10.0%
!! AATCCAAAAAACTAATTTAA+TGG - Chr3:90725748-90725767 None:intergenic 15.0%
!! AGAAGAAAACAAAAATATAT+GGG - Chr3:90728603-90728622 None:intergenic 15.0%
!! ATCCAAAAAACTAATTTAAT+GGG - Chr3:90725747-90725766 None:intergenic 15.0%
!! ATTTGTAAAACACTTAAAAA+TGG - Chr3:90728878-90728897 None:intergenic 15.0%
!! CATTTCAAAATGAAATTTAA+AGG - Chr3:90728324-90728343 None:intergenic 15.0%
!! TACTTTGTATATGAAATATA+TGG + Chr3:90727482-90727501 MsG0380017014.01.T01:intron 15.0%
!! TATTAATACTTATTGGAAAT+TGG - Chr3:90726516-90726535 None:intergenic 15.0%
!!! AAGTTTTATTAATATGGAAT+TGG + Chr3:90728924-90728943 MsG0380017014.01.T01:three_prime_UTR 15.0%
!!! GTTATTTTGTAGTTATTTTA+AGG + Chr3:90727731-90727750 MsG0380017014.01.T01:intron 15.0%
!!! TTTTTAGGTTTTTTAATTGT+TGG + Chr3:90729111-90729130 MsG0380017014.01.T01:three_prime_UTR 15.0%
!! AAACAACAAAAAGGAAAAAA+CGG - Chr3:90727253-90727272 None:intergenic 20.0%
!! AACTCTTAAAAACTTACTAT+GGG - Chr3:90725331-90725350 None:intergenic 20.0%
!! AATAAGATGTATATCCAAAA+AGG - Chr3:90727757-90727776 None:intergenic 20.0%
!! AATAATAAGGATACCAAAAA+AGG - Chr3:90728108-90728127 None:intergenic 20.0%
!! ATTTAAAGGAATAAATTCCA+TGG - Chr3:90728310-90728329 None:intergenic 20.0%
!! GAGAAGAAAACAAAAATATA+TGG - Chr3:90728604-90728623 None:intergenic 20.0%
!! TACCTATTATATACTTTCAT+CGG - Chr3:90725678-90725697 None:intergenic 20.0%
!! TATACAATAGTTTACACTAT+AGG + Chr3:90725557-90725576 MsG0380017014.01.T01:intron 20.0%
!! TCCAAAAAACTAATTTAATG+GGG - Chr3:90725746-90725765 None:intergenic 20.0%
!! TTGCTTCAAATAATGAAATA+TGG - Chr3:90725798-90725817 None:intergenic 20.0%
!! TTTAAAGGAATAAATTCCAT+GGG - Chr3:90728309-90728328 None:intergenic 20.0%
!!! AAATTTCTTTTTGTGGAAAA+AGG - Chr3:90726477-90726496 None:intergenic 20.0%
!!! AATAGTAGAATTTTCAAAAC+AGG - Chr3:90725855-90725874 None:intergenic 20.0%
!!! AATCATATCAATATGTTTTC+TGG + Chr3:90725510-90725529 MsG0380017014.01.T01:intron 20.0%
!!! ACACTGAAGTTTTATTAATA+TGG + Chr3:90728918-90728937 MsG0380017014.01.T01:three_prime_UTR 20.0%
!!! ATGAATAATGATGATGAATT+TGG - Chr3:90726442-90726461 None:intergenic 20.0%
!!! ATTATCACTTGTTATATTTG+AGG + Chr3:90729050-90729069 MsG0380017014.01.T01:three_prime_UTR 20.0%
!!! CGGATATTAGTTTTTTTTAT+GGG + Chr3:90729000-90729019 MsG0380017014.01.T01:three_prime_UTR 20.0%
!!! CTCATGAATATTTTTTTGTT+TGG + Chr3:90728418-90728437 MsG0380017014.01.T01:intron 20.0%
!!! TTATCACTTGTTATATTTGA+GGG + Chr3:90729051-90729070 MsG0380017014.01.T01:three_prime_UTR 20.0%
!!! TTTAATCAATGTATTGATCT+TGG + Chr3:90728625-90728644 MsG0380017014.01.T01:intron 20.0%
! AATAAAAAACTCACATCCAA+CGG + Chr3:90726548-90726567 MsG0380017014.01.T01:intron 25.0%
! AATTTGGAAAGTAAAGTGAA+TGG - Chr3:90726426-90726445 None:intergenic 25.0%
! ACCTATTATATACTTTCATC+GGG - Chr3:90725677-90725696 None:intergenic 25.0%
! ATAAATGAAGTAGAGAGAAA+GGG + Chr3:90725413-90725432 MsG0380017014.01.T01:intron 25.0%
! ATTTGGAAAGTAAAGTGAAT+GGG - Chr3:90726425-90726444 None:intergenic 25.0%
! CAAAATCGAAAACAACAAAA+AGG - Chr3:90727262-90727281 None:intergenic 25.0%
! CAACTCTTAAAAACTTACTA+TGG - Chr3:90725332-90725351 None:intergenic 25.0%
! CTCTATATGTTAATGAATGA+AGG + Chr3:90728754-90728773 MsG0380017014.01.T01:three_prime_UTR 25.0%
! CTTCATTCATTAACATATAG+AGG - Chr3:90728756-90728775 None:intergenic 25.0%
! CTTGAACAATAAGTAATTTG+TGG + Chr3:90726170-90726189 MsG0380017014.01.T01:intron 25.0%
! GAGTAGTACCTAATTTATTT+GGG - Chr3:90728278-90728297 None:intergenic 25.0%
! GATTAATAAATGGAATGACT+CGG - Chr3:90726086-90726105 None:intergenic 25.0%
! GTAAAACACTTAAAAATGGA+AGG - Chr3:90728874-90728893 None:intergenic 25.0%
! GTATTTATTGAGGGTAAAAT+TGG - Chr3:90725979-90725998 None:intergenic 25.0%
! TTAAAGGAATAAATTCCATG+GGG - Chr3:90728308-90728327 None:intergenic 25.0%
! TTTACACTATAGGAAAGTTT+GGG + Chr3:90725567-90725586 MsG0380017014.01.T01:intron 25.0%
!! AACAAATTTTACTGCCAATT+AGG + Chr3:90728719-90728738 MsG0380017014.01.T01:exon 25.0%
!! AATACTTGACAACTCATTTT+AGG - Chr3:90728147-90728166 None:intergenic 25.0%
!! AATTATTGCCTATTTTCTTG+AGG + Chr3:90728895-90728914 MsG0380017014.01.T01:three_prime_UTR 25.0%
!! AGTTGTCAAGTATTGTTTAT+TGG + Chr3:90728153-90728172 MsG0380017014.01.T01:intron 25.0%
!! CTGAAAACATTTTATGAACA+TGG + Chr3:90727867-90727886 MsG0380017014.01.T01:intron 25.0%
!! GCAATATTTTTCACAATCTT+TGG + Chr3:90727444-90727463 MsG0380017014.01.T01:intron 25.0%
!! TGAAATATATGGAGTATTTG+TGG + Chr3:90727493-90727512 MsG0380017014.01.T01:intron 25.0%
!! TTCATTATTTGAAGCAAATG+TGG + Chr3:90725801-90725820 MsG0380017014.01.T01:intron 25.0%
!! TTTTGTGATTCAAATCTGTT+AGG + Chr3:90727277-90727296 MsG0380017014.01.T01:intron 25.0%
!!! ATGAGTTTTTTCTGTTCTAA+TGG + Chr3:90728379-90728398 MsG0380017014.01.T01:intron 25.0%
!!! CATAGTAAGTTTTTAAGAGT+TGG + Chr3:90725330-90725349 MsG0380017014.01.T01:intron 25.0%
!!! GCGGATATTAGTTTTTTTTA+TGG + Chr3:90728999-90729018 MsG0380017014.01.T01:three_prime_UTR 25.0%
!!! TACTGAAAAAGCACTATTAA+GGG + Chr3:90726343-90726362 MsG0380017014.01.T01:intron 25.0%
!!! TAGTTATTTTAAGGCCTTTT+TGG + Chr3:90727740-90727759 MsG0380017014.01.T01:intron 25.0%
!!! TCCCCATTAAATTAGTTTTT+TGG + Chr3:90725742-90725761 MsG0380017014.01.T01:intron 25.0%
!!! TGTCATTTTCTCATAAGTAA+GGG + Chr3:90726041-90726060 MsG0380017014.01.T01:intron 25.0%
!!! TTGTCATTTTCTCATAAGTA+AGG + Chr3:90726040-90726059 MsG0380017014.01.T01:intron 25.0%
!!! TTTTTTCTTTCAGAATCACT+AGG + Chr3:90726245-90726264 MsG0380017014.01.T01:intron 25.0%
!!! TTTTTTGTTTGGTAATCACT+AGG + Chr3:90728429-90728448 MsG0380017014.01.T01:intron 25.0%
AAATTATGTGAGAGAAAAGC+TGG - Chr3:90726003-90726022 None:intergenic 30.0%
AACTCTGATCAAATAGTGTA+AGG - Chr3:90727950-90727969 None:intergenic 30.0%
AAGTAAGGGCAGTTTATAAA+GGG + Chr3:90726055-90726074 MsG0380017014.01.T01:intron 30.0%
AATAAGGATACCAAAAAAGG+AGG - Chr3:90728105-90728124 None:intergenic 30.0%
AATAGAAATGATGAGGAAGA+CGG - Chr3:90726658-90726677 None:intergenic 30.0%
ACTCTGATCAAATAGTGTAA+GGG - Chr3:90727949-90727968 None:intergenic 30.0%
AGTCGAATCCAATATTCAAA+GGG + Chr3:90726380-90726399 MsG0380017014.01.T01:intron 30.0%
ATTTGTTTACTGCTGTTCAT+CGG - Chr3:90728706-90728725 None:intergenic 30.0%
CCTATTATATACTTTCATCG+GGG - Chr3:90725676-90725695 None:intergenic 30.0%
CGAGTAGTACCTAATTTATT+TGG - Chr3:90728279-90728298 None:intergenic 30.0%
CTTATTTCCATTACTTCTAC+AGG - Chr3:90727847-90727866 None:intergenic 30.0%
GATAAATGAAGTAGAGAGAA+AGG + Chr3:90725412-90725431 MsG0380017014.01.T01:intron 30.0%
GTTTACACTATAGGAAAGTT+TGG + Chr3:90725566-90725585 MsG0380017014.01.T01:intron 30.0%
TAAGTAAGGGCAGTTTATAA+AGG + Chr3:90726054-90726073 MsG0380017014.01.T01:intron 30.0%
TAGTCGAATCCAATATTCAA+AGG + Chr3:90726379-90726398 MsG0380017014.01.T01:intron 30.0%
TGAGAGAAATAGAAATGATG+AGG - Chr3:90726665-90726684 None:intergenic 30.0%
TGTAATTGAAAGGTTTGTGA+TGG + Chr3:90727519-90727538 MsG0380017014.01.T01:intron 30.0%
TGTTAATGAATGAAGGAAGA+AGG + Chr3:90728761-90728780 MsG0380017014.01.T01:three_prime_UTR 30.0%
TTGGCACACAGATTAATAAA+TGG - Chr3:90726096-90726115 None:intergenic 30.0%
TTTGTGGATCTGTAATTGAA+AGG + Chr3:90727509-90727528 MsG0380017014.01.T01:intron 30.0%
! AAAAGCTGGAGTATTTATTG+AGG - Chr3:90725989-90726008 None:intergenic 30.0%
! AAAGCTGGAGTATTTATTGA+GGG - Chr3:90725988-90726007 None:intergenic 30.0%
! ACACTATTTGATCAGAGTTT+TGG + Chr3:90727951-90727970 MsG0380017014.01.T01:intron 30.0%
! AGAAAGTGAGATCTGTTTTA+GGG - Chr3:90726724-90726743 None:intergenic 30.0%
! AGCTGCTTCTTTAATTTCAT+CGG - Chr3:90728676-90728695 None:intergenic 30.0%
! ATTATTTGAAGCAAATGTGG+AGG + Chr3:90725804-90725823 MsG0380017014.01.T01:intron 30.0%
! GTTTTCTACCTTAAGATGAA+GGG + Chr3:90727131-90727150 MsG0380017014.01.T01:CDS 30.0%
! TCTTGTCTTCTTTTTCTTGT+TGG - Chr3:90726319-90726338 None:intergenic 30.0%
! TGTCAAGTATTGTTTATTGG+TGG + Chr3:90728156-90728175 MsG0380017014.01.T01:intron 30.0%
!! AAGTGACACTCATTTTGAAA+CGG - Chr3:90725889-90725908 None:intergenic 30.0%
!! GTACTGAAAAAGCACTATTA+AGG + Chr3:90726342-90726361 MsG0380017014.01.T01:intron 30.0%
!! TGTATTGATCTTGGTTTGTT+TGG + Chr3:90728634-90728653 MsG0380017014.01.T01:intron 30.0%
!!! AATGTGTTCCTTTGTTTTAC+AGG + Chr3:90727545-90727564 MsG0380017014.01.T01:intron 30.0%
!!! AGGTTTTGTTTGAGTTTGTA+GGG + Chr3:90725367-90725386 MsG0380017014.01.T01:intron 30.0%
!!! TAGGTTTTGTTTGAGTTTGT+AGG + Chr3:90725366-90725385 MsG0380017014.01.T01:intron 30.0%
ACACAAGGATTCAGATGATT+AGG + Chr3:90725278-90725297 MsG0380017014.01.T01:CDS 35.0%
ACTTCTACAGGAAAACAGTT+TGG - Chr3:90727835-90727854 None:intergenic 35.0%
AGGAGAAGTTTGATCCTAAT+TGG - Chr3:90728736-90728755 None:intergenic 35.0%
AGGTCAAGTAGGCAATAATA+AGG - Chr3:90728121-90728140 None:intergenic 35.0%
CATCTTAAGGTAGAAAACCT+TGG - Chr3:90727129-90727148 None:intergenic 35.0%
GTCGAATCCAATATTCAAAG+GGG + Chr3:90726381-90726400 MsG0380017014.01.T01:intron 35.0%
TAATATCCGCTCACCAAATT+CGG - Chr3:90728989-90729008 None:intergenic 35.0%
TGAGATTCAATATGAACCGT+TGG - Chr3:90726567-90726586 None:intergenic 35.0%
TGCAATGTCCTGTAAAACAA+AGG - Chr3:90727556-90727575 None:intergenic 35.0%
TGGATTCTACTAACCACTTA+TGG + Chr3:90728073-90728092 MsG0380017014.01.T01:intron 35.0%
TTCAGTGTCCTCAAGAAAAT+AGG - Chr3:90728906-90728925 None:intergenic 35.0%
TTCATGTCTGTTATGAGTTC+TGG + Chr3:90728824-90728843 MsG0380017014.01.T01:three_prime_UTR 35.0%
TTCTTGTTGGTCCAAGTTAA+GGG - Chr3:90726306-90726325 None:intergenic 35.0%
TTTCTTGTTGGTCCAAGTTA+AGG - Chr3:90726307-90726326 None:intergenic 35.0%
TTTGTTTACTGCTGTTCATC+GGG - Chr3:90728705-90728724 None:intergenic 35.0%
! CCCCGATGAAAGTATATAAT+AGG + Chr3:90725673-90725692 MsG0380017014.01.T01:intron 35.0%
! CTGTTTTCCTGTAGAAGTAA+TGG + Chr3:90727837-90727856 MsG0380017014.01.T01:intron 35.0%
! GAGAAAGTGAGATCTGTTTT+AGG - Chr3:90726725-90726744 None:intergenic 35.0%
! GGAACATGTTGATTGAATTC+GGG + Chr3:90726145-90726164 MsG0380017014.01.T01:intron 35.0%
! GGGAACATGTTGATTGAATT+CGG + Chr3:90726144-90726163 MsG0380017014.01.T01:intron 35.0%
! GGTTTTCTACCTTAAGATGA+AGG + Chr3:90727130-90727149 MsG0380017014.01.T01:CDS 35.0%
! TCTGGTTTATATCGACTGTT+CGG + Chr3:90725528-90725547 MsG0380017014.01.T01:intron 35.0%
! TGTTTGAGTTTGTAGGGAAA+TGG + Chr3:90725373-90725392 MsG0380017014.01.T01:intron 35.0%
! TTTGTTTGGTTTCAGGATGA+TGG + Chr3:90728648-90728667 MsG0380017014.01.T01:intron 35.0%
!! AATGGGTTAAGTTGGTTGAA+TGG - Chr3:90726408-90726427 None:intergenic 35.0%
!! ATCTTGGTTTGTTTGGTTTC+AGG + Chr3:90728641-90728660 MsG0380017014.01.T01:intron 35.0%
!! ATGGGTTAAGTTGGTTGAAT+GGG - Chr3:90726407-90726426 None:intergenic 35.0%
!! ATTTTAGGTGTAGGTCAAGT+AGG - Chr3:90728132-90728151 None:intergenic 35.0%
!! CTCTCTCTAGAATTCAACAA+TGG + Chr3:90726742-90726761 MsG0380017014.01.T01:intron 35.0%
!! GTAAAGTGAATGGGTTAAGT+TGG - Chr3:90726416-90726435 None:intergenic 35.0%
!! TCTCTAGAATTCAACAATGG+CGG + Chr3:90726745-90726764 MsG0380017014.01.T01:intron 35.0%
!! TGACAACTCATTTTAGGTGT+AGG - Chr3:90728141-90728160 None:intergenic 35.0%
!!! GAGGAATTCACGTTGTTTTT+AGG + Chr3:90729096-90729115 MsG0380017014.01.T01:three_prime_UTR 35.0%
!!! GATGCTTTCCGTTTTTTAAG+CGG + Chr3:90725629-90725648 MsG0380017014.01.T01:intron 35.0%
AAACTTGATCTCGCCGAATT+TGG + Chr3:90728973-90728992 MsG0380017014.01.T01:three_prime_UTR 40.0%
AACCTGAGCAGATTTGTAAG+CGG - Chr3:90727228-90727247 None:intergenic 40.0%
AACCTGTTTAGCAAGATTGC+AGG - Chr3:90727673-90727692 None:intergenic 40.0%
AATCAATACCTGCATGTCAG+AGG - Chr3:90728557-90728576 None:intergenic 40.0%
ACGGTGAGTTTCTTCGTTAT+CGG - Chr3:90726874-90726893 None:intergenic 40.0%
AGATGAAGGGAGATTACCAT+AGG + Chr3:90727144-90727163 MsG0380017014.01.T01:CDS 40.0%
AGTTCAAGACTCCTTCATTG+AGG + Chr3:90725710-90725729 MsG0380017014.01.T01:intron 40.0%
AGTTGGACATTTGCACTTCT+AGG + Chr3:90725347-90725366 MsG0380017014.01.T01:intron 40.0%
GAAGTTATGCTCTTGCTACT+AGG - Chr3:90728356-90728375 None:intergenic 40.0%
GAGCTTTCTAACATCTGTGA+CGG + Chr3:90727050-90727069 MsG0380017014.01.T01:CDS 40.0%
GATAAGACCATCCTCAATGA+AGG - Chr3:90725724-90725743 None:intergenic 40.0%
GATTCGACTATCCATTGCTT+GGG - Chr3:90726369-90726388 None:intergenic 40.0%
GGTAATCTCCCTTCATCTTA+AGG - Chr3:90727142-90727161 None:intergenic 40.0%
GTAGAAAACCTTGGAATCAC+CGG - Chr3:90727120-90727139 None:intergenic 40.0%
GTCATACTATGCACTAGGAA+GGG - Chr3:90726271-90726290 None:intergenic 40.0%
GTGTGGTGCCCAAATAAATT+AGG + Chr3:90728267-90728286 MsG0380017014.01.T01:intron 40.0%
GTTATATTTGAGGGAACTCG+TGG + Chr3:90729060-90729079 MsG0380017014.01.T01:three_prime_UTR 40.0%
TATCTTGCTGAGTTCAAGAC+TGG + Chr3:90727167-90727186 MsG0380017014.01.T01:CDS 40.0%
TCATCGGGGAGAAAAGTTAT+TGG - Chr3:90725662-90725681 None:intergenic 40.0%
TCTTGTTGGTCCAAGTTAAG+GGG - Chr3:90726305-90726324 None:intergenic 40.0%
TGAACTCAGCAAGATACCTA+TGG - Chr3:90727163-90727182 None:intergenic 40.0%
TGATGAAGCAATTGCTGAAC+TGG + Chr3:90728456-90728475 MsG0380017014.01.T01:CDS 40.0%
TGTTCAAAACCCTCACAATG+TGG - Chr3:90725456-90725475 None:intergenic 40.0%
TTCGTGATAATCTCACCCTA+TGG + Chr3:90728530-90728549 MsG0380017014.01.T01:CDS 40.0%
! CTACCGATCTAAGATCGAAT+CGG + Chr3:90727028-90727047 MsG0380017014.01.T01:CDS 40.0%
! GCAACAATGATGTTGCGTTT+TGG + Chr3:90728053-90728072 MsG0380017014.01.T01:intron 40.0%
! TGCTTGTTGCCAATCTCTTT+GGG + Chr3:90728784-90728803 MsG0380017014.01.T01:three_prime_UTR 40.0%
! TGTTTATTGGTGGTTAGCTC+AGG + Chr3:90728166-90728185 MsG0380017014.01.T01:intron 40.0%
! TTTTATGGGTCATGAACTCG+TGG + Chr3:90729014-90729033 MsG0380017014.01.T01:three_prime_UTR 40.0%
!! GGAAAGCATCATTCGTTACA+AGG - Chr3:90725619-90725638 None:intergenic 40.0%
!! TTATGAGTTCTGGATGTCCT+GGG + Chr3:90728834-90728853 MsG0380017014.01.T01:three_prime_UTR 40.0%
!!! ATGGATCAGACCTCCTTTTT+TGG + Chr3:90728092-90728111 MsG0380017014.01.T01:intron 40.0%
!!! TCGTGGTAGTTTTGTATGTG+AGG + Chr3:90729077-90729096 MsG0380017014.01.T01:three_prime_UTR 40.0%
!!! TCTTTGGGTGCTGAGATTTT+AGG + Chr3:90728799-90728818 MsG0380017014.01.T01:three_prime_UTR 40.0%
AAGGAGGTCTGATCCATAAG+TGG - Chr3:90728089-90728108 None:intergenic 45.0%
ACCAACTCATCCAATTAGGC+TGG + Chr3:90727590-90727609 MsG0380017014.01.T01:CDS 45.0%
ACTATTAAGGGCCCAAGCAA+TGG + Chr3:90726355-90726374 MsG0380017014.01.T01:intron 45.0%
AGGACAAACTAAAACAGCCC+AGG - Chr3:90728854-90728873 None:intergenic 45.0%
AGTTTCTTCGTTATCGGCGT+TGG - Chr3:90726868-90726887 None:intergenic 45.0%
ATCTCAGCACCCAAAGAGAT+TGG - Chr3:90728796-90728815 None:intergenic 45.0%
ATTGCTGAACTGGATACCCT+TGG + Chr3:90728466-90728485 MsG0380017014.01.T01:CDS 45.0%
CAAAACCCTCACAATGTGGA+GGG - Chr3:90725452-90725471 None:intergenic 45.0%
CAAGACTCCTTCATTGAGGA+TGG + Chr3:90725714-90725733 MsG0380017014.01.T01:intron 45.0%
CACCATTTCTTCGTAGCGTT+CGG - Chr3:90726824-90726843 None:intergenic 45.0%
CATGTAAACGTTCTCTTCCG+AGG - Chr3:90726782-90726801 None:intergenic 45.0%
CCAACTCATCCAATTAGGCT+GGG + Chr3:90727591-90727610 MsG0380017014.01.T01:CDS 45.0%
CGATCTTAGATCGGTAGTCA+CGG - Chr3:90727025-90727044 None:intergenic 45.0%
CTCGGAAGAGAACGTTTACA+TGG + Chr3:90726780-90726799 MsG0380017014.01.T01:CDS 45.0%
CTTGTATGATTCCTCGCCAA+GGG - Chr3:90728485-90728504 None:intergenic 45.0%
CTTGTTGGTCCAAGTTAAGG+GGG - Chr3:90726304-90726323 None:intergenic 45.0%
GAATGGGCCCCTTTGAATAT+TGG - Chr3:90726391-90726410 None:intergenic 45.0%
GGATTCGACTATCCATTGCT+TGG - Chr3:90726370-90726389 None:intergenic 45.0%
GGTAGGTCATACTATGCACT+AGG - Chr3:90726276-90726295 None:intergenic 45.0%
GGTCATACTATGCACTAGGA+AGG - Chr3:90726272-90726291 None:intergenic 45.0%
GTAGCCTACAAGAACGTCAT+CGG + Chr3:90726916-90726935 MsG0380017014.01.T01:CDS 45.0%
GTGTTGTAGAGGTCAACACA+AGG + Chr3:90725263-90725282 MsG0380017014.01.T01:CDS 45.0%
TACTGCTGTTCATCGGGTTT+AGG - Chr3:90728699-90728718 None:intergenic 45.0%
TCAAAACCCTCACAATGTGG+AGG - Chr3:90725453-90725472 None:intergenic 45.0%
TCTTGTAGGCTACAGAGAGA+AGG - Chr3:90726909-90726928 None:intergenic 45.0%
TGCCACCAACTCATCCAATT+AGG + Chr3:90727586-90727605 MsG0380017014.01.T01:CDS 45.0%
TGCCTGCAATCTTGCTAAAC+AGG + Chr3:90727668-90727687 MsG0380017014.01.T01:CDS 45.0%
TTCAAAATGAGCGTCCCTTG+AGG - Chr3:90726121-90726140 None:intergenic 45.0%
TTCCTCGATCGAACAGAAAG+AGG + Chr3:90726966-90726985 MsG0380017014.01.T01:CDS 45.0%
TTGTTGGTCCAAGTTAAGGG+GGG - Chr3:90726303-90726322 None:intergenic 45.0%
! AGCCTAATTGGATGAGTTGG+TGG - Chr3:90727591-90727610 None:intergenic 45.0%
! CGAAGAAATGGTGGAGTTCA+TGG + Chr3:90726831-90726850 MsG0380017014.01.T01:CDS 45.0%
! GCTCCGATTCGATCTTAGAT+CGG - Chr3:90727034-90727053 None:intergenic 45.0%
! GTGCTTGTTGCCAATCTCTT+TGG + Chr3:90728783-90728802 MsG0380017014.01.T01:three_prime_UTR 45.0%
! TGACAAACCTGTCACTGACT+TGG - Chr3:90726220-90726239 None:intergenic 45.0%
! TTGCCGATAATTGCGTTGGT+GGG - Chr3:90726597-90726616 None:intergenic 45.0%
!! GTTATGAGTTCTGGATGTCC+TGG + Chr3:90728833-90728852 MsG0380017014.01.T01:three_prime_UTR 45.0%
!!! TTTCCGTTTTTTAAGCGGCG+AGG + Chr3:90725634-90725653 MsG0380017014.01.T01:intron 45.0%
AAACCACCCTTTCCCTTTCG+TGG + Chr3:90726629-90726648 MsG0380017014.01.T01:intron 50.0%
AAACCACGAAAGGGAAAGGG+TGG - Chr3:90726635-90726654 None:intergenic 50.0%
AAGCAGCGGAAGGAATGAGA+CGG - Chr3:90727097-90727116 None:intergenic 50.0%
ACGGAAACCACGAAAGGGAA+AGG - Chr3:90726639-90726658 None:intergenic 50.0%
AGAAACTCACCGTCGAAGAG+AGG + Chr3:90726881-90726900 MsG0380017014.01.T01:CDS 50.0%
AGAGCAAGACCCAGCCTAAT+TGG - Chr3:90727603-90727622 None:intergenic 50.0%
AGATCGGTAGTCACGGATGA+CGG - Chr3:90727018-90727037 None:intergenic 50.0%
AGCCGAACGCTACGAAGAAA+TGG + Chr3:90726819-90726838 MsG0380017014.01.T01:CDS 50.0%
AGGAAGACGGAAACCACGAA+AGG - Chr3:90726645-90726664 None:intergenic 50.0%
AGTAGTCCCTCCACATTGTG+AGG + Chr3:90725443-90725462 MsG0380017014.01.T01:intron 50.0%
ATCTGTGTGCCAAAGCCTCA+AGG + Chr3:90726103-90726122 MsG0380017014.01.T01:intron 50.0%
ATGGGTCATGAACTCGTGGT+AGG + Chr3:90729018-90729037 MsG0380017014.01.T01:three_prime_UTR 50.0%
CCCAGCCTAATTGGATGAGT+TGG - Chr3:90727594-90727613 None:intergenic 50.0%
CCTTGGCGAGGAATCATACA+AGG + Chr3:90728483-90728502 MsG0380017014.01.T01:CDS 50.0%
CCTTGTATGATTCCTCGCCA+AGG - Chr3:90728486-90728505 None:intergenic 50.0%
CGAACGCTACGAAGAAATGG+TGG + Chr3:90726822-90726841 MsG0380017014.01.T01:CDS 50.0%
CGGAAACCACGAAAGGGAAA+GGG - Chr3:90726638-90726657 None:intergenic 50.0%
CTCCTCTTTCTGTTCGATCG+AGG - Chr3:90726971-90726990 None:intergenic 50.0%
CTGCATGTCAGAGGTCCATA+GGG - Chr3:90728548-90728567 None:intergenic 50.0%
GACCCCACCAACGCAATTAT+CGG + Chr3:90726591-90726610 MsG0380017014.01.T01:intron 50.0%
GAGAAGGTTCCTCTCTTCGA+CGG - Chr3:90726893-90726912 None:intergenic 50.0%
GAGCCTCGCCGCTTAAAAAA+CGG - Chr3:90725640-90725659 None:intergenic 50.0%
GCTGTTACCAAGTCAGTGAC+AGG + Chr3:90726210-90726229 MsG0380017014.01.T01:intron 50.0%
GCTGTTGCCGATAATTGCGT+TGG - Chr3:90726601-90726620 None:intergenic 50.0%
GGAAGACGGAAACCACGAAA+GGG - Chr3:90726644-90726663 None:intergenic 50.0%
GTAGTCCCTCCACATTGTGA+GGG + Chr3:90725444-90725463 MsG0380017014.01.T01:intron 50.0%
GTTGCCGATAATTGCGTTGG+TGG - Chr3:90726598-90726617 None:intergenic 50.0%
TACTACTCGTGTAGTCCCCA+TGG + Chr3:90728290-90728309 MsG0380017014.01.T01:intron 50.0%
TCTCTTCCGAGGTGAATGAG+CGG - Chr3:90726771-90726790 None:intergenic 50.0%
TCTGTGTGCCAAAGCCTCAA+GGG + Chr3:90726104-90726123 MsG0380017014.01.T01:intron 50.0%
TGCTCCGATGACGTTCTTGT+AGG - Chr3:90726923-90726942 None:intergenic 50.0%
TGGGTCATGAACTCGTGGTA+GGG + Chr3:90729019-90729038 MsG0380017014.01.T01:three_prime_UTR 50.0%
! AGGGACGCTCATTTTGAACG+AGG + Chr3:90726123-90726142 MsG0380017014.01.T01:intron 50.0%
! ATCTCGCCGAATTTGGTGAG+CGG + Chr3:90728980-90728999 MsG0380017014.01.T01:three_prime_UTR 50.0%
! GGGACGCTCATTTTGAACGA+GGG + Chr3:90726124-90726143 MsG0380017014.01.T01:intron 50.0%
! TGCCGATAATTGCGTTGGTG+GGG - Chr3:90726596-90726615 None:intergenic 50.0%
! TTCGTAGCGTTCGGCTTGTT+CGG - Chr3:90726815-90726834 None:intergenic 50.0%
! TTCTTCGTTATCGGCGTTGG+CGG - Chr3:90726865-90726884 None:intergenic 50.0%
!! GGGAAAACGAGGTGTTGTAG+AGG + Chr3:90725252-90725271 MsG0380017014.01.T01:CDS 50.0%
AAGTTAAGGGGGGCAGTGGT+AGG - Chr3:90726293-90726312 None:intergenic 55.0%
ACCTCCTACAGGCTAGAGCA+AGG - Chr3:90728249-90728268 None:intergenic 55.0%
ACCTTGCTCTAGCCTGTAGG+AGG + Chr3:90728245-90728264 MsG0380017014.01.T01:intron 55.0%
AGCAGCGGAAGGAATGAGAC+GGG - Chr3:90727096-90727115 None:intergenic 55.0%
ATGAGCGTCCCTTGAGGCTT+TGG - Chr3:90726115-90726134 None:intergenic 55.0%
CCTATGGACCTCTGACATGC+AGG + Chr3:90728546-90728565 MsG0380017014.01.T01:CDS 55.0%
CCTGCATGTCAGAGGTCCAT+AGG - Chr3:90728549-90728568 None:intergenic 55.0%
CGCCGCTTACAAATCTGCTC+AGG + Chr3:90727223-90727242 MsG0380017014.01.T01:CDS 55.0%
CTCATTCCTTCCGCTGCTTC+CGG + Chr3:90727098-90727117 MsG0380017014.01.T01:CDS 55.0%
CTTGGAATCACCGGAAGCAG+CGG - Chr3:90727111-90727130 None:intergenic 55.0%
GAACAGAAAGAGGAGAGCCG+CGG + Chr3:90726976-90726995 MsG0380017014.01.T01:CDS 55.0%
GACACCTTGCTCTAGCCTGT+AGG + Chr3:90728242-90728261 MsG0380017014.01.T01:intron 55.0%
GCAAGATTGCAGGCACGATC+AGG - Chr3:90727663-90727682 None:intergenic 55.0%
TACCACTGCCCCCCTTAACT+TGG + Chr3:90726292-90726311 MsG0380017014.01.T01:intron 55.0%
TGAACTGGATACCCTTGGCG+AGG + Chr3:90728471-90728490 MsG0380017014.01.T01:CDS 55.0%
CGCTGCTTCCGGTGATTCCA+AGG + Chr3:90727109-90727128 MsG0380017014.01.T01:CDS 60.0%
CTCAGCAGCCTCCTTACGCT+CGG - Chr3:90727195-90727214 None:intergenic 60.0%
GAACGTGATCCTCGTTGCCG+CGG - Chr3:90726996-90727015 None:intergenic 60.0%
GAATCACCGGAAGCAGCGGA+AGG - Chr3:90727107-90727126 None:intergenic 60.0%
GCTCTAGCCTGTAGGAGGTG+TGG + Chr3:90728250-90728269 MsG0380017014.01.T01:intron 60.0%
GTCCAAGTTAAGGGGGGCAG+TGG - Chr3:90726297-90726316 None:intergenic 60.0%
TTGGGCACCACACCTCCTAC+AGG - Chr3:90728260-90728279 None:intergenic 60.0%
TCGGAGCACGACGTGCTTCG+TGG + Chr3:90726935-90726954 MsG0380017014.01.T01:CDS 65.0%
TGGCGGCCGCTCATTCACCT+CGG + Chr3:90726762-90726781 MsG0380017014.01.T01:CDS 65.0%
! CAAGACTGGCGCCGAGCGTA+AGG + Chr3:90727181-90727200 MsG0380017014.01.T01:CDS 65.0%
AGAGGAGAGCCGCGGCAACG+AGG + Chr3:90726984-90727003 MsG0380017014.01.T01:CDS 70.0%
! GACTGGCGCCGAGCGTAAGG+AGG + Chr3:90727184-90727203 MsG0380017014.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 90725247 90729197 90725247 ID=MsG0380017014.01;Name=MsG0380017014.01
Chr3 mRNA 90725247 90729197 90725247 ID=MsG0380017014.01.T01;Parent=MsG0380017014.01;Name=MsG0380017014.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0.75|0.6|0.8|0.75|0.6|5|478|280
Chr3 exon 90725247 90725299 90725247 ID=MsG0380017014.01.T01:exon:30881;Parent=MsG0380017014.01.T01
Chr3 exon 90726752 90727244 90726752 ID=MsG0380017014.01.T01:exon:30882;Parent=MsG0380017014.01.T01
Chr3 exon 90727567 90727689 90727567 ID=MsG0380017014.01.T01:exon:30883;Parent=MsG0380017014.01.T01
Chr3 exon 90728451 90728567 90728451 ID=MsG0380017014.01.T01:exon:30884;Parent=MsG0380017014.01.T01
Chr3 exon 90728663 90729197 90728663 ID=MsG0380017014.01.T01:exon:30885;Parent=MsG0380017014.01.T01
Chr3 CDS 90725247 90725299 90725247 ID=MsG0380017014.01.T01:cds;Parent=MsG0380017014.01.T01
Chr3 CDS 90726752 90727244 90726752 ID=MsG0380017014.01.T01:cds;Parent=MsG0380017014.01.T01
Chr3 CDS 90727567 90727689 90727567 ID=MsG0380017014.01.T01:cds;Parent=MsG0380017014.01.T01
Chr3 CDS 90728451 90728567 90728451 ID=MsG0380017014.01.T01:cds;Parent=MsG0380017014.01.T01
Chr3 CDS 90728663 90728719 90728663 ID=MsG0380017014.01.T01:cds;Parent=MsG0380017014.01.T01
Chr3 three_prime_UTR 90728720 90729197 90728720 ID=MsG0380017014.01.T01:three_prime_utr;Parent=MsG0380017014.01.T01
Gene Sequence

>MsG0380017014.01.T01

ATGTTGGGAAAACGAGGTGTTGTAGAGGTCAACACAAGGATTCAGATGATTAGAATTCAACAATGGCGGCCGCTCATTCACCTCGGAAGAGAACGTTTACATGGCAAAGCTCGCCGAACAAGCCGAACGCTACGAAGAAATGGTGGAGTTCATGGAAAAGTCTCCGCCAACGCCGATAACGAAGAAACTCACCGTCGAAGAGAGGAACCTTCTCTCTGTAGCCTACAAGAACGTCATCGGAGCACGACGTGCTTCGTGGCGTATCATTTCCTCGATCGAACAGAAAGAGGAGAGCCGCGGCAACGAGGATCACGTTCCGTCATCCGTGACTACCGATCTAAGATCGAATCGGAGCTTTCTAACATCTGTGACGGTATTCTCAAGCTTCTTGATTCCCGTCTCATTCCTTCCGCTGCTTCCGGTGATTCCAAGGTTTTCTACCTTAAGATGAAGGGAGATTACCATAGGTATCTTGCTGAGTTCAAGACTGGCGCCGAGCGTAAGGAGGCTGCTGAGAGCACTCTCGCCGCTTACAAATCTGCTCAGGACATTGCAAACGCTGAATTGCCACCAACTCATCCAATTAGGCTGGGTCTTGCTCTGAATTTCTCTGTGTTTTACTATGAGATTCTTAACTCTCCTGATCGTGCCTGCAATCTTGCTAAACAGGCTTTTGATGAAGCAATTGCTGAACTGGATACCCTTGGCGAGGAATCATACAAGGATAGCACTTTGATCATGCAACTTCTTCGTGATAATCTCACCCTATGGACCTCTGACATGCAGGATGATGGTGCCGATGAAATTAAAGAAGCAGCTCCTAAACCCGATGAACAGCAGTAA
Protein sequence

>MsG0380017014.01.T01

MLGKRGVVEVNTRIQMIRIQQWRPLIHLGRERLHGKARRTSRTLRRNGGVHGKVSANADNEETHRRREEPSLCSLQERHRSTTCFVAYHFLDRTERGEPRQRGSRSVIRDYRSKIESELSNICDGILKLLDSRLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLAAYKSAQDIANAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAPKPDEQQ*