AlfalfaGEDB | MsG0580026075.01

M. sativa cultivar ZhongmuNo.1 / MsG0580026075.01

KEGG: K09338
GO: GO:0003677 GO:0006355 GO:0043565
PFAM: PF00046

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580026075.01.T01	GAU19668.1	90.11	91	8	1	2	91	60	150	9.38E-50	165

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580026075.01.T01	Q8LC03	85.882	85	11	1	8	91	72	156	3.02E-45	150

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580026075.01.T01	A0A2Z6MBC4	90.110	91	8	1	2	91	60	150	4.48e-50	165

TFs/TRs:

Gene ID	Type	Classification
MsG0580026075.01.T01	TF	HB-other

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048856.01	MsG0580026075.01	0.828634	8.060399e-55	8.057549e-52
MsG0180000001.01	MsG0580026075.01	0.804146	2.485289e-49	1.271834e-46
MsG0180000144.01	MsG0580026075.01	0.807030	6.168814e-50	3.399677e-47
MsG0180000145.01	MsG0580026075.01	0.811253	7.677701e-51	4.729451e-48
MsG0180000178.01	MsG0580026075.01	0.832857	7.441254e-56	8.421793e-53
MsG0180000195.01	MsG0580026075.01	0.829136	6.094817e-55	6.182712e-52
MsG0180000334.01	MsG0580026075.01	0.811744	6.005185e-51	3.747425e-48
MsG0180000470.01	MsG0580026075.01	0.805726	1.161684e-49	6.191942e-47
MsG0180000836.01	MsG0580026075.01	0.807692	4.464900e-50	2.503261e-47
MsG0180001173.01	MsG0580026075.01	0.824757	6.788671e-54	6.069291e-51
MsG0180001892.01	MsG0580026075.01	0.803716	3.052288e-49	1.544811e-46
MsG0180002071.01	MsG0580026075.01	0.812784	3.560907e-51	2.284722e-48
MsG0180003361.01	MsG0580026075.01	0.818010	2.449901e-52	1.812322e-49
MsG0180003444.01	MsG0580026075.01	0.806972	6.344340e-50	3.491133e-47
MsG0180003669.01	MsG0580026075.01	0.806872	6.660633e-50	3.655756e-47
MsG0180003786.01	MsG0580026075.01	0.823037	1.718425e-53	1.463065e-50
MsG0180003920.01	MsG0580026075.01	0.839752	1.312789e-57	1.830407e-54
MsG0180004099.01	MsG0580026075.01	0.804635	1.964909e-49	1.018250e-46
MsG0180004149.01	MsG0580026075.01	0.817645	2.961116e-52	2.168681e-49
MsG0180004249.01	MsG0580026075.01	0.806846	6.746280e-50	3.700326e-47
MsG0180004357.01	MsG0580026075.01	0.822527	2.258562e-53	1.895315e-50
MsG0180004707.01	MsG0580026075.01	0.825181	5.390698e-54	4.878190e-51
MsG0180004754.01	MsG0580026075.01	0.800934	1.141936e-48	5.384640e-46
MsG0180004970.01	MsG0580026075.01	0.802839	4.636840e-49	2.294811e-46
MsG0180004975.01	MsG0580026075.01	0.800045	1.732212e-48	7.985616e-46
MsG0180005575.01	MsG0580026075.01	0.804620	1.979466e-49	1.025396e-46
MsG0180006000.01	MsG0580026075.01	0.806541	7.823668e-50	4.257765e-47
MsG0180006023.01	MsG0580026075.01	0.817126	3.876885e-52	2.799258e-49
MsG0280006337.01	MsG0580026075.01	0.814539	1.463158e-51	9.844655e-49
MsG0280010698.01	MsG0580026075.01	0.811374	7.229071e-51	4.467304e-48
MsG0280010778.01	MsG0580026075.01	0.812647	3.815215e-51	2.439192e-48
MsG0280010907.01	MsG0580026075.01	0.804856	1.767179e-49	9.211006e-47
MsG0280011014.01	MsG0580026075.01	0.830447	2.921666e-55	3.078861e-52
MsG0280011124.01	MsG0580026075.01	0.809193	2.135931e-50	1.245917e-47
MsG0280011258.01	MsG0580026075.01	0.828224	1.012389e-54	1.000049e-51
MsG0280011282.01	MsG0580026075.01	0.843495	1.353203e-58	2.120943e-55
MsG0280011305.01	MsG0580026075.01	0.805416	1.349241e-49	7.134091e-47
MsG0280011388.01	MsG0580026075.01	0.829344	5.425917e-55	5.538720e-52
MsG0380011716.01	MsG0580026075.01	0.802318	5.938137e-49	2.900151e-46
MsG0380012471.01	MsG0580026075.01	0.834469	2.944074e-56	3.497232e-53
MsG0380013475.01	MsG0580026075.01	0.821435	4.044785e-53	3.290359e-50
MsG0380013476.01	MsG0580026075.01	0.815750	7.876575e-52	5.477552e-49
MsG0380013834.01	MsG0580026075.01	0.824417	8.165859e-54	7.227940e-51
MsG0480018465.01	MsG0580026075.01	0.805048	1.611014e-49	8.438162e-47
MsG0480018641.01	MsG0580026075.01	0.806069	9.839372e-50	5.290500e-47
MsG0480019442.01	MsG0580026075.01	0.802067	6.687753e-49	3.245188e-46
MsG0480019710.01	MsG0580026075.01	0.803864	2.843975e-49	1.444967e-46
MsG0480019922.01	MsG0580026075.01	0.845224	4.639300e-59	7.678377e-56
MsG0480020495.01	MsG0580026075.01	0.815574	8.620438e-52	5.965693e-49
MsG0480020675.01	MsG0580026075.01	0.804818	1.799330e-49	9.369679e-47
MsG0480020780.01	MsG0580026075.01	0.806748	7.074121e-50	3.870264e-47
MsG0480020907.01	MsG0580026075.01	0.807721	4.401970e-50	2.469939e-47
MsG0480021452.01	MsG0580026075.01	0.807433	5.067648e-50	2.822172e-47
MsG0480022164.01	MsG0580026075.01	0.818971	1.483767e-52	1.127243e-49
MsG0480022325.01	MsG0580026075.01	0.816525	5.287210e-52	3.755294e-49
MsG0480022620.01	MsG0580026075.01	0.801614	8.285409e-49	3.974326e-46
MsG0480022686.01	MsG0580026075.01	-0.816204	6.238304e-52	4.392335e-49
MsG0480023272.01	MsG0580026075.01	0.805345	1.396452e-49	7.370177e-47
MsG0480023463.01	MsG0580026075.01	0.826169	3.143901e-54	2.925903e-51
MsG0480023488.01	MsG0580026075.01	0.811442	6.986965e-51	4.325602e-48
MsG0480023707.01	MsG0580026075.01	0.830081	3.590476e-55	3.743724e-52
MsG0480023718.01	MsG0580026075.01	0.810937	8.992233e-51	5.493520e-48
MsG0480023873.01	MsG0580026075.01	0.810436	1.153889e-50	6.954804e-48
MsG0580024489.01	MsG0580026075.01	0.812619	3.870580e-51	2.472756e-48
MsG0580025740.01	MsG0580026075.01	0.802232	6.185494e-49	3.014086e-46
MsG0580026002.01	MsG0580026075.01	0.803283	3.752922e-49	1.878385e-46
MsG0580026075.01	MsG0580026593.01	0.811637	6.338584e-51	3.943938e-48
MsG0580026075.01	MsG0580026610.01	0.816520	5.302012e-52	3.765252e-49
MsG0580026075.01	MsG0580027091.01	0.822053	2.909854e-53	2.408795e-50
MsG0580026075.01	MsG0580027243.01	0.821050	4.961522e-53	3.993534e-50
MsG0580026075.01	MsG0580027431.01	0.813128	2.993437e-51	1.938311e-48
MsG0580026075.01	MsG0580027745.01	0.811853	5.687380e-51	3.559302e-48
MsG0580026075.01	MsG0580028060.01	0.806816	6.846429e-50	3.752279e-47
MsG0580026075.01	MsG0580028176.01	0.818841	1.587823e-52	1.201911e-49
MsG0580026075.01	MsG0580028517.01	0.810350	1.204096e-50	7.241216e-48
MsG0580026075.01	MsG0580029640.01	0.836180	1.088541e-56	1.361404e-53
MsG0580026075.01	MsG0580029729.01	0.802709	4.932980e-49	2.433196e-46
MsG0580026075.01	MsG0680030447.01	0.804675	1.927645e-49	9.999899e-47
MsG0580026075.01	MsG0680030672.01	0.802802	4.719191e-49	2.333324e-46
MsG0580026075.01	MsG0680030918.01	0.823848	1.110352e-53	9.672460e-51
MsG0580026075.01	MsG0680031114.01	0.817570	3.079792e-52	2.250913e-49
MsG0580026075.01	MsG0680031506.01	0.814732	1.326459e-51	8.971366e-49
MsG0580026075.01	MsG0680031549.01	0.847652	1.009942e-59	1.807549e-56
MsG0580026075.01	MsG0680031617.01	0.804317	2.289132e-49	1.176601e-46
MsG0580026075.01	MsG0680032935.01	0.810803	9.611048e-51	5.850185e-48
MsG0580026075.01	MsG0680034187.01	0.802281	6.043992e-49	2.948892e-46
MsG0580026075.01	MsG0680034739.01	0.811010	8.669004e-51	5.306554e-48
MsG0580026075.01	MsG0680034853.01	0.807099	5.964998e-50	3.293068e-47
MsG0580026075.01	MsG0680035346.01	0.832600	8.619326e-56	9.680468e-53
MsG0580026075.01	MsG0680035475.01	0.851604	7.965165e-61	1.620715e-57
MsG0580026075.01	MsG0680035658.01	0.810482	1.127905e-50	6.806651e-48
MsG0580026075.01	MsG0680035692.01	0.804488	2.109314e-49	1.088930e-46
MsG0580026075.01	MsG0780035979.01	0.819669	1.028664e-52	7.967041e-50
MsG0580026075.01	MsG0780036147.01	0.827462	1.544039e-54	1.491730e-51
MsG0580026075.01	MsG0780036340.01	0.804975	1.668793e-49	8.724644e-47
MsG0580026075.01	MsG0780036477.01	0.823255	1.528248e-53	1.309057e-50
MsG0580026075.01	MsG0780036663.01	0.827275	1.711337e-54	1.644378e-51
MsG0580026075.01	MsG0780036719.01	0.805975	1.029408e-49	5.521939e-47
MsG0580026075.01	MsG0780036752.01	0.825926	3.590064e-54	3.318293e-51
MsG0580026075.01	MsG0780036815.01	0.831613	1.511361e-55	1.648729e-52
MsG0580026075.01	MsG0780036816.01	0.805124	1.552851e-49	8.149669e-47
MsG0580026075.01	MsG0780036950.01	0.818256	2.155066e-52	1.604970e-49
MsG0580026075.01	MsG0780037054.01	0.810672	1.025894e-50	6.222948e-48
MsG0580026075.01	MsG0780038150.01	0.801053	1.079446e-48	5.105538e-46
MsG0580026075.01	MsG0780038401.01	0.807834	4.164036e-50	2.343320e-47
MsG0580026075.01	MsG0780038424.01	0.819958	8.837206e-53	6.900120e-50
MsG0580026075.01	MsG0780038602.01	0.813136	2.981340e-51	1.930912e-48
MsG0580026075.01	MsG0780038603.01	0.836661	8.212353e-57	1.041776e-53
MsG0580026075.01	MsG0780039059.01	0.826247	3.012698e-54	2.810079e-51
MsG0580026075.01	MsG0780039137.01	0.816530	5.275025e-52	3.747125e-49
MsG0580026075.01	MsG0780039170.01	0.805994	1.020375e-49	5.476163e-47
MsG0580026075.01	MsG0780039243.01	0.818998	1.462362e-52	1.111842e-49
MsG0580026075.01	MsG0780039307.01	0.806141	9.499754e-50	5.117387e-47
MsG0580026075.01	MsG0780039443.01	0.822731	2.025344e-53	1.709466e-50
MsG0580026075.01	MsG0780039520.01	0.805902	1.066541e-49	5.710316e-47
MsG0580026075.01	MsG0780039655.01	0.802104	6.572226e-49	3.192038e-46
MsG0580026075.01	MsG0780039866.01	0.806787	6.941652e-50	3.801568e-47
MsG0580026075.01	MsG0780040044.01	0.804957	1.683555e-49	8.797895e-47
MsG0580026075.01	MsG0780040057.01	0.835627	1.503331e-56	1.848666e-53
MsG0580026075.01	MsG0780040529.01	0.813427	2.574477e-51	1.680716e-48
MsG0580026075.01	MsG0780040926.01	0.822055	2.907165e-53	2.406701e-50
MsG0580026075.01	MsG0780041559.01	0.818768	1.650124e-52	1.246487e-49
MsG0580026075.01	MsG0880041986.01	0.870594	1.296990e-66	5.073446e-63
MsG0580026075.01	MsG0880042518.01	0.807805	4.224909e-50	2.375774e-47
MsG0580026075.01	MsG0880042520.01	0.811768	5.934525e-51	3.705658e-48
MsG0580026075.01	MsG0880042552.01	0.802228	6.198349e-49	3.019995e-46
MsG0580026075.01	MsG0880042698.01	0.818108	2.327680e-52	1.726539e-49
MsG0580026075.01	MsG0880042760.01	0.803581	3.256264e-49	1.642470e-46
MsG0580026075.01	MsG0880042961.01	0.821326	4.286096e-53	3.476075e-50
MsG0580026075.01	MsG0880044008.01	0.812622	3.863893e-51	2.468709e-48
MsG0580026075.01	MsG0880044510.01	0.804839	1.781626e-49	9.282297e-47
MsG0580026075.01	MsG0880044574.01	0.825496	4.542005e-54	4.146686e-51
MsG0580026075.01	MsG0880044782.01	0.868060	8.641986e-66	3.084102e-62
MsG0580026075.01	MsG0880045372.01	0.800973	1.120911e-48	5.290874e-46
MsG0580026075.01	MsG0880045453.01	0.800326	1.518845e-48	7.052371e-46
MsG0580026075.01	MsG0880045965.01	0.807547	4.791652e-50	2.676406e-47
MsG0580026075.01	MsG0880046012.01	0.836705	8.002596e-57	1.016602e-53
MsG0580026075.01	MsG0880046762.01	0.814285	1.665328e-51	1.112800e-48
MsG0380015332.01	MsG0580026075.01	0.836812	7.513856e-57	9.576323e-54
MsG0380015555.01	MsG0580026075.01	0.813345	2.682689e-51	1.747530e-48
MsG0380015677.01	MsG0580026075.01	0.843852	1.085949e-58	1.721447e-55
MsG0380015944.01	MsG0580026075.01	0.803154	3.991173e-49	1.991113e-46
MsG0380016247.01	MsG0580026075.01	0.842657	2.261749e-58	3.452540e-55
MsG0380016517.01	MsG0580026075.01	0.820359	7.153036e-53	5.647284e-50
MsG0380016765.01	MsG0580026075.01	0.819556	1.091674e-52	8.428526e-50
MsG0380016970.01	MsG0580026075.01	0.827323	1.667245e-54	1.604308e-51
MsG0380016994.01	MsG0580026075.01	0.827556	1.465633e-54	1.419705e-51
MsG0480018163.01	MsG0580026075.01	0.832351	9.934249e-56	1.107450e-52
MsG0280007452.01	MsG0580026075.01	0.825163	5.445286e-54	4.924874e-51
MsG0280007609.01	MsG0580026075.01	0.808058	3.732560e-50	2.112873e-47
MsG0280007955.01	MsG0580026075.01	0.800003	1.767131e-48	8.137794e-46
MsG0280008280.01	MsG0580026075.01	0.825180	5.394281e-54	4.881230e-51
MsG0280008457.01	MsG0580026075.01	0.805521	1.282329e-49	6.798484e-47
MsG0280008615.01	MsG0580026075.01	0.809678	1.680282e-50	9.928888e-48
MsG0280008909.01	MsG0580026075.01	0.806698	7.250797e-50	3.961701e-47
MsG0280009514.01	MsG0580026075.01	0.835851	1.318787e-56	1.632758e-53
MsG0280009748.01	MsG0580026075.01	0.845657	3.543089e-59	5.946930e-56
MsG0280009794.01	MsG0580026075.01	0.832049	1.179800e-55	1.303703e-52
MsG0280010176.01	MsG0580026075.01	0.838134	3.444866e-57	4.571025e-54
MsG0280010443.01	MsG0580026075.01	0.800654	1.302254e-48	6.097038e-46
MsG0280010489.01	MsG0580026075.01	0.815212	1.037654e-51	7.109428e-49
MsG0280010491.01	MsG0580026075.01	0.828076	1.099316e-54	1.081235e-51
MsG0280010533.01	MsG0580026075.01	0.808673	2.758520e-50	1.586939e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580026075.01.T01	MTR_5g039000	91.209	91	7	1	2	91	58	148	1.47e-52	166
MsG0580026075.01.T01	MTR_8g468210	89.412	85	8	1	8	91	64	148	6.02e-48	154
MsG0580026075.01.T01	MTR_6g011610	73.563	87	20	2	8	91	62	148	1.67e-37	126
MsG0580026075.01.T01	MTR_6g011610	73.563	87	20	2	8	91	81	167	1.99e-37	127
MsG0580026075.01.T01	MTR_7g010020	66.279	86	27	2	8	91	66	151	9.06e-34	117
MsG0580026075.01.T01	MTR_6g007647	72.368	76	20	1	17	91	29	104	8.67e-31	109
MsG0580026075.01.T01	MTR_3g080100	63.636	88	31	1	5	91	4	91	1.12e-30	107
MsG0580026075.01.T01	MTR_3g080100	63.636	88	31	1	5	91	43	130	2.33e-30	108
MsG0580026075.01.T01	MTR_6g007647	72.368	76	20	1	17	91	63	138	2.61e-30	108
MsG0580026075.01.T01	MTR_8g089895	63.953	86	28	2	9	91	40	125	3.66e-30	108
MsG0580026075.01.T01	MTR_3g086790	64.706	85	29	1	8	91	47	131	2.13e-29	106
MsG0580026075.01.T01	MTR_4g107650	64.286	84	29	1	9	91	83	166	2.22e-27	102
MsG0580026075.01.T01	MTR_8g469430	69.737	76	21	2	17	91	86	160	7.43e-27	99.8
MsG0580026075.01.T01	MTR_5g038280	69.444	72	21	1	21	91	87	158	1.05e-26	100
MsG0580026075.01.T01	MTR_7g103340	53.488	86	39	1	9	93	51	136	1.66e-25	95.1
MsG0580026075.01.T01	MTR_1g061660	57.333	75	31	1	20	93	58	132	4.59e-23	88.6
MsG0580026075.01.T01	MTR_3g092150	59.155	71	28	1	23	92	40	110	4.11e-21	84.0
MsG0580026075.01.T01	MTR_8g026960	57.576	66	27	1	28	92	41	106	3.58e-20	81.3
MsG0580026075.01.T01	MTR_4g097600	47.191	89	44	2	5	92	113	199	4.46e-17	73.6
MsG0580026075.01.T01	MTR_5g019680	54.795	73	30	2	21	91	53	124	5.91e-16	69.7
MsG0580026075.01.T01	MTR_5g019650	54.795	73	30	2	21	91	53	124	1.26e-15	68.9
MsG0580026075.01.T01	MTR_4g100550	45.349	86	45	2	9	92	107	192	7.40e-15	67.8
MsG0580026075.01.T01	MTR_5g014890	46.914	81	42	1	13	92	115	195	1.25e-14	67.0
MsG0580026075.01.T01	MTR_2g061030	42.857	91	50	2	3	92	183	272	2.47e-14	66.6
MsG0580026075.01.T01	MTR_1g054285	45.679	81	43	1	13	92	146	226	5.23e-14	65.5
MsG0580026075.01.T01	MTR_7g093430	44.444	81	44	1	13	92	152	232	1.02e-13	64.7
MsG0580026075.01.T01	MTR_8g006705	50.685	73	35	1	21	92	146	218	1.29e-13	64.7
MsG0580026075.01.T01	MTR_1g017090	49.315	73	36	1	21	92	130	202	2.51e-13	63.5
MsG0580026075.01.T01	MTR_4g126900	47.143	70	36	1	24	92	91	160	2.90e-13	62.8
MsG0580026075.01.T01	MTR_3g103590	43.478	92	51	1	2	92	126	217	7.12e-13	62.4
MsG0580026075.01.T01	MTR_5g013010	41.975	81	46	1	13	92	128	208	2.70e-11	58.2
MsG0580026075.01.T01	MTR_4g084750	46.575	73	38	1	21	92	65	137	3.57e-11	57.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580026075.01.T01	AT1G69780	85.882	85	11	1	8	91	72	156	3.08e-46	150
MsG0580026075.01.T01	AT5G15150	71.277	94	23	3	2	91	93	186	1.30e-39	133
MsG0580026075.01.T01	AT1G26960	73.256	86	22	1	7	91	57	142	6.14e-38	127
MsG0580026075.01.T01	AT3G01220	65.591	93	29	2	2	91	66	158	2.35e-37	127
MsG0580026075.01.T01	AT5G65310	68.132	91	25	2	7	93	37	127	1.42e-32	114
MsG0580026075.01.T01	AT5G65310	68.132	91	25	2	7	93	55	145	1.74e-32	115
MsG0580026075.01.T01	AT4G40060	75.342	73	17	1	20	91	58	130	9.50e-31	110
MsG0580026075.01.T01	AT2G22430	75.342	73	17	1	20	91	61	133	9.77e-31	110
MsG0580026075.01.T01	AT3G01470	71.053	76	21	1	17	91	64	139	1.52e-29	106
MsG0580026075.01.T01	AT2G46680	56.944	72	30	1	22	92	33	104	3.96e-22	86.7
MsG0580026075.01.T01	AT2G46680	56.944	72	30	1	22	92	33	104	4.09e-22	86.7
MsG0580026075.01.T01	AT3G61890	57.143	70	29	1	24	92	33	102	6.49e-21	83.2
MsG0580026075.01.T01	AT5G03790	54.054	74	33	1	21	93	77	150	3.03e-20	80.5
MsG0580026075.01.T01	AT5G03790	54.054	74	33	1	21	93	77	150	3.66e-20	81.3
MsG0580026075.01.T01	AT2G36610	45.263	95	41	3	8	93	60	152	1.68e-18	75.9
MsG0580026075.01.T01	AT1G27045	59.420	69	27	1	21	88	17	85	1.91e-18	75.5
MsG0580026075.01.T01	AT1G27045	59.420	69	27	1	21	88	25	93	1.91e-18	75.9
MsG0580026075.01.T01	AT1G27045	59.420	69	27	1	21	88	25	93	1.91e-18	75.9
MsG0580026075.01.T01	AT4G36740	49.451	91	43	2	3	91	38	127	2.46e-18	76.3
MsG0580026075.01.T01	AT4G36740	49.451	91	43	2	3	91	37	126	2.69e-18	75.9
MsG0580026075.01.T01	AT1G27045	59.420	69	27	1	21	88	68	136	3.09e-18	76.3
MsG0580026075.01.T01	AT5G66700	49.425	87	39	3	7	91	59	142	3.80e-18	75.9
MsG0580026075.01.T01	AT1G27045	59.420	69	27	1	21	88	68	136	5.43e-18	75.9
MsG0580026075.01.T01	AT2G18550	48.810	84	39	2	11	90	48	131	1.25e-16	71.6
MsG0580026075.01.T01	AT5G53980	47.368	76	39	1	16	90	6	81	3.16e-16	69.3
MsG0580026075.01.T01	AT3G60390	46.512	86	45	1	8	92	149	234	9.01e-15	67.8
MsG0580026075.01.T01	AT4G37790	43.023	86	48	1	8	92	113	198	2.79e-14	66.2
MsG0580026075.01.T01	AT5G06710	43.820	89	48	2	5	92	175	262	6.02e-14	65.9
MsG0580026075.01.T01	AT2G01430	44.186	86	47	1	8	92	126	211	7.18e-14	65.1
MsG0580026075.01.T01	AT5G47370	48.718	78	39	1	10	86	119	196	8.87e-14	65.1
MsG0580026075.01.T01	AT2G22800	44.444	81	44	1	13	92	105	185	1.10e-12	62.0
MsG0580026075.01.T01	AT4G17460	43.210	81	45	1	13	92	127	207	2.78e-12	60.8
MsG0580026075.01.T01	AT2G44910	47.945	73	37	1	21	92	163	235	3.85e-12	60.5
MsG0580026075.01.T01	AT2G01430	48.485	66	33	1	8	72	126	191	4.04e-11	57.0

Find 13 sgRNAs with CRISPR-Local

Find 14 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GAAGAAGAGGAGGCTTAATA+TGG	0.330137	5:-30220810	MsG0580026075.01.T01:CDS
AACCTAGACAAGTTGCTATA+TGG	0.331625	5:-30220700	MsG0580026075.01.T01:CDS
CTATATGGTTTCAAAATAGA+AGG	0.336540	5:-30220685	MsG0580026075.01.T01:CDS
TTCAAAATAGAAGGGCTAGA+TGG	0.455440	5:-30220676	MsG0580026075.01.T01:CDS
GAAGAAGATTTATCAGATGA+TGG	0.488868	5:-30220848	MsG0580026075.01.T01:CDS
AACTTGAAAGAGTTTGAACT+TGG	0.505947	5:-30220776	MsG0580026075.01.T01:CDS
TCAGATGATGGATCACAAGC+TGG	0.546396	5:-30220836	MsG0580026075.01.T01:CDS
CACAAGCTGGAGAGAAGAAG+AGG	0.557400	5:-30220823	MsG0580026075.01.T01:CDS
AACCATATAGCAACTTGTCT+AGG	0.569003	5:+30220698	None:intergenic
TATATGGTTTCAAAATAGAA+GGG	0.590755	5:-30220684	MsG0580026075.01.T01:CDS
GTAATAAGCTTGAGCCTGAG+AGG	0.611232	5:-30220754	MsG0580026075.01.T01:CDS
AAGCTGGAGAGAAGAAGAGG+AGG	0.613532	5:-30220820	MsG0580026075.01.T01:CDS
TAGATGGAAGACAAAGCAGT+TGG	0.627956	5:-30220660	MsG0580026075.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TATATGGTTTCAAAATAGAA+GGG	-	Chr5:30220795-30220814	MsG0580026075.01.T01:CDS	20.0%
!	CTATATGGTTTCAAAATAGA+AGG	-	Chr5:30220794-30220813	MsG0580026075.01.T01:CDS	25.0%
	AACTTGAAAGAGTTTGAACT+TGG	-	Chr5:30220703-30220722	MsG0580026075.01.T01:CDS	30.0%
	GAAGAAGATTTATCAGATGA+TGG	-	Chr5:30220631-30220650	MsG0580026075.01.T01:CDS	30.0%
	AACCATATAGCAACTTGTCT+AGG	+	Chr5:30220784-30220803	None:intergenic	35.0%
	AACCTAGACAAGTTGCTATA+TGG	-	Chr5:30220779-30220798	MsG0580026075.01.T01:CDS	35.0%
	TTCAAAATAGAAGGGCTAGA+TGG	-	Chr5:30220803-30220822	MsG0580026075.01.T01:CDS	35.0%
	GAAGAAGAGGAGGCTTAATA+TGG	-	Chr5:30220669-30220688	MsG0580026075.01.T01:CDS	40.0%
	TAGATGGAAGACAAAGCAGT+TGG	-	Chr5:30220819-30220838	MsG0580026075.01.T01:CDS	40.0%
	GTAATAAGCTTGAGCCTGAG+AGG	-	Chr5:30220725-30220744	MsG0580026075.01.T01:CDS	45.0%
!!	TCAGATGATGGATCACAAGC+TGG	-	Chr5:30220643-30220662	MsG0580026075.01.T01:CDS	45.0%
	AAGCTGGAGAGAAGAAGAGG+AGG	-	Chr5:30220659-30220678	MsG0580026075.01.T01:CDS	50.0%
	CACAAGCTGGAGAGAAGAAG+AGG	-	Chr5:30220656-30220675	MsG0580026075.01.T01:CDS	50.0%
!	GCAAGCTGCATTTTCCTCTC+AGG	+	Chr5:30220742-30220761	None:intergenic	50.0%

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	30220610	30220891	30220610	ID=MsG0580026075.01;Name=MsG0580026075.01
Chr5	mRNA	30220610	30220891	30220610	ID=MsG0580026075.01.T01;Parent=MsG0580026075.01;Name=MsG0580026075.01.T01;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|93
Chr5	exon	30220610	30220891	30220610	ID=MsG0580026075.01.T01:exon:7274;Parent=MsG0580026075.01.T01
Chr5	CDS	30220610	30220891	30220610	ID=MsG0580026075.01.T01:cds;Parent=MsG0580026075.01.T01

Gene Sequence	>MsG0580026075.01.T01 CTGGAGAAGAAGAAAATCTCTGAAGAAGATTTATCAGATGATGGATCACAAGCTGGAGAGAAGAAGAGGAGGCTTAATATGGAACAAGTGAAGAACTTGAAAGAGTTTGAACTTGGTAATAAGCTTGAGCCTGAGAGGAAAATGCAGCTTGCAAGAGCTCTTAACTTGCAACCTAGACAAGTTGCTATATGGTTTCAAAATAGAAGGGCTAGATGGAAGACAAAGCAGTTGGAAAAAGACTATGATGTTCGTAAAAGACAATATGATGCTATAAGTAGATAA
Protein sequence	>MsG0580026075.01.T01 LEKKKISEEDLSDDGSQAGEKKRRLNMEQVKNLKEFELGNKLEPERKMQLARALNLQPRQVAIWFQNRRARWKTKQLEKDYDVRKRQYDAISR*