Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000178.01.T01 | XP_013466057.1 | 95.319 | 235 | 2 | 1 | 1 | 235 | 1 | 226 | 7.41E-160 | 451 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000178.01.T01 | A0A072VE50 | 95.319 | 235 | 2 | 1 | 1 | 235 | 1 | 226 | 3.54e-160 | 451 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047869.01 | MsG0180000178.01 | 0.817277 | 3.584704e-52 | 2.598966e-49 |
| MsG0080048856.01 | MsG0180000178.01 | 0.816615 | 5.047394e-52 | 3.593835e-49 |
| MsG0180000145.01 | MsG0180000178.01 | 0.809331 | 1.995064e-50 | 1.168029e-47 |
| MsG0180000178.01 | MsG0180000195.01 | 0.810018 | 1.420004e-50 | 8.466415e-48 |
| MsG0180000178.01 | MsG0180000335.01 | 0.817931 | 2.552132e-52 | 1.883941e-49 |
| MsG0180000178.01 | MsG0180000470.01 | 0.814699 | 1.348416e-51 | 9.111812e-49 |
| MsG0180000178.01 | MsG0180000828.01 | 0.802419 | 5.660010e-49 | 2.771375e-46 |
| MsG0180000178.01 | MsG0180001153.01 | 0.803986 | 2.682850e-49 | 1.367391e-46 |
| MsG0180000178.01 | MsG0180001892.01 | 0.816102 | 6.575290e-52 | 4.616684e-49 |
| MsG0180000178.01 | MsG0180002482.01 | 0.812121 | 4.970794e-51 | 3.133593e-48 |
| MsG0180000178.01 | MsG0180002870.01 | 0.816358 | 5.764195e-52 | 4.075525e-49 |
| MsG0180000178.01 | MsG0180003361.01 | 0.843668 | 1.216010e-58 | 1.916510e-55 |
| MsG0180000178.01 | MsG0180003371.01 | 0.807681 | 4.487800e-50 | 2.515461e-47 |
| MsG0180000178.01 | MsG0180003669.01 | 0.840189 | 1.010313e-57 | 1.428090e-54 |
| MsG0180000178.01 | MsG0180003786.01 | 0.815162 | 1.064537e-51 | 7.283798e-49 |
| MsG0180000178.01 | MsG0180003920.01 | 0.872938 | 2.163485e-67 | 9.218811e-64 |
| MsG0180000178.01 | MsG0180004143.01 | 0.810239 | 1.272165e-50 | 7.628471e-48 |
| MsG0180000178.01 | MsG0180004149.01 | 0.822463 | 2.337118e-53 | 1.957583e-50 |
| MsG0180000178.01 | MsG0180004264.01 | 0.823601 | 1.268505e-53 | 1.097298e-50 |
| MsG0180000178.01 | MsG0180004463.01 | 0.824595 | 7.413606e-54 | 6.597160e-51 |
| MsG0180000178.01 | MsG0180004707.01 | 0.822845 | 1.904753e-53 | 1.612888e-50 |
| MsG0180000178.01 | MsG0180004711.01 | 0.803367 | 3.605596e-49 | 1.808530e-46 |
| MsG0180000178.01 | MsG0180004975.01 | 0.803941 | 2.740687e-49 | 1.395282e-46 |
| MsG0180000178.01 | MsG0180005050.01 | 0.800705 | 1.271558e-48 | 5.960661e-46 |
| MsG0180000178.01 | MsG0180005371.01 | 0.807103 | 5.951420e-50 | 3.285945e-47 |
| MsG0180000178.01 | MsG0180005664.01 | 0.876357 | 1.489642e-68 | 7.199985e-65 |
| MsG0180000178.01 | MsG0180005763.01 | 0.826452 | 2.692204e-54 | 2.525813e-51 |
| MsG0180000178.01 | MsG0180005860.01 | 0.803909 | 2.783374e-49 | 1.415839e-46 |
| MsG0180000178.01 | MsG0180006000.01 | 0.834588 | 2.748189e-56 | 3.276129e-53 |
| MsG0180000178.01 | MsG0180006257.01 | 0.822578 | 2.198068e-53 | 1.847307e-50 |
| MsG0180000178.01 | MsG0280006469.01 | 0.833602 | 4.853905e-56 | 5.617305e-53 |
| MsG0180000178.01 | MsG0280006487.01 | 0.800594 | 1.339495e-48 | 6.261665e-46 |
| MsG0180000178.01 | MsG0280006712.01 | 0.841741 | 3.952283e-58 | 5.861934e-55 |
| MsG0180000178.01 | MsG0280007164.01 | 0.818772 | 1.646559e-52 | 1.243963e-49 |
| MsG0180000178.01 | MsG0280007458.01 | 0.832857 | 7.441802e-56 | 8.422372e-53 |
| MsG0180000178.01 | MsG0280007476.01 | 0.811155 | 8.066289e-51 | 4.955781e-48 |
| MsG0180000178.01 | MsG0280007491.01 | 0.807666 | 4.522028e-50 | 2.533592e-47 |
| MsG0180000178.01 | MsG0280007547.01 | 0.804506 | 2.090846e-49 | 1.079890e-46 |
| MsG0180000178.01 | MsG0280007609.01 | 0.813696 | 2.245912e-51 | 1.476985e-48 |
| MsG0180000178.01 | MsG0280008280.01 | 0.828697 | 7.782535e-55 | 7.793936e-52 |
| MsG0180000178.01 | MsG0280008362.01 | 0.805435 | 1.336872e-49 | 7.072183e-47 |
| MsG0180000178.01 | MsG0280008615.01 | 0.800278 | 1.553514e-48 | 7.204432e-46 |
| MsG0180000178.01 | MsG0280009514.01 | 0.866731 | 2.301625e-65 | 7.838354e-62 |
| MsG0180000178.01 | MsG0280009748.01 | 0.810773 | 9.757158e-51 | 5.934418e-48 |
| MsG0180000178.01 | MsG0280009794.01 | 0.866826 | 2.145983e-65 | 7.333393e-62 |
| MsG0180000178.01 | MsG0280010443.01 | 0.837462 | 5.125325e-57 | 6.662747e-54 |
| MsG0180000178.01 | MsG0280010489.01 | 0.820087 | 8.256608e-53 | 6.470345e-50 |
| MsG0180000178.01 | MsG0280010491.01 | 0.815198 | 1.045138e-51 | 7.158071e-49 |
| MsG0180000178.01 | MsG0280010778.01 | 0.822524 | 2.262723e-53 | 1.898612e-50 |
| MsG0180000178.01 | MsG0280010779.01 | 0.807165 | 5.774219e-50 | 3.193417e-47 |
| MsG0180000178.01 | MsG0280010886.01 | 0.800592 | 1.340593e-48 | 6.266561e-46 |
| MsG0180000178.01 | MsG0280011004.01 | 0.802381 | 5.763462e-49 | 2.819321e-46 |
| MsG0180000178.01 | MsG0280011014.01 | 0.843559 | 1.300626e-58 | 2.042771e-55 |
| MsG0180000178.01 | MsG0280011156.01 | 0.805515 | 1.286226e-49 | 6.818060e-47 |
| MsG0180000178.01 | MsG0280011258.01 | 0.822509 | 2.281099e-53 | 1.913170e-50 |
| MsG0180000178.01 | MsG0280011282.01 | 0.860936 | 1.459116e-63 | 4.057011e-60 |
| MsG0180000178.01 | MsG0280011388.01 | 0.852645 | 4.030243e-61 | 8.477504e-58 |
| MsG0180000178.01 | MsG0380011609.01 | 0.825577 | 4.345700e-54 | 3.976614e-51 |
| MsG0180000178.01 | MsG0380011755.01 | 0.812580 | 3.947573e-51 | 2.519322e-48 |
| MsG0180000178.01 | MsG0380012471.01 | 0.862262 | 5.739216e-64 | 1.670539e-60 |
| MsG0180000178.01 | MsG0380013178.01 | 0.812720 | 3.678296e-51 | 2.356204e-48 |
| MsG0180000178.01 | MsG0380013475.01 | 0.846012 | 2.837736e-59 | 4.817736e-56 |
| MsG0180000178.01 | MsG0380013549.01 | 0.801570 | 8.460182e-49 | 4.053670e-46 |
| MsG0180000178.01 | MsG0380013834.01 | 0.815934 | 7.166960e-52 | 5.008806e-49 |
| MsG0180000178.01 | MsG0380014468.01 | 0.800338 | 1.510193e-48 | 7.014227e-46 |
| MsG0180000178.01 | MsG0380014573.01 | 0.801261 | 9.785459e-49 | 4.652435e-46 |
| MsG0180000178.01 | MsG0380014647.01 | 0.805638 | 1.212128e-49 | 6.445905e-47 |
| MsG0180000178.01 | MsG0380014703.01 | 0.807191 | 5.702160e-50 | 3.155682e-47 |
| MsG0180000178.01 | MsG0380015164.01 | 0.805129 | 1.549212e-49 | 8.131546e-47 |
| MsG0180000178.01 | MsG0380015332.01 | 0.815055 | 1.124573e-51 | 7.672296e-49 |
| MsG0180000178.01 | MsG0380015555.01 | 0.823493 | 1.344390e-53 | 1.159411e-50 |
| MsG0180000178.01 | MsG0380015566.01 | 0.866953 | 1.954464e-65 | 6.708192e-62 |
| MsG0180000178.01 | MsG0380015631.01 | 0.815651 | 8.289299e-52 | 5.748804e-49 |
| MsG0180000178.01 | MsG0380015677.01 | 0.852669 | 3.967366e-61 | 8.351860e-58 |
| MsG0180000178.01 | MsG0380015720.01 | 0.825599 | 4.292879e-54 | 3.930988e-51 |
| MsG0180000178.01 | MsG0380015808.01 | 0.845683 | 3.486319e-59 | 5.856238e-56 |
| MsG0180000178.01 | MsG0380016004.01 | 0.803627 | 3.185212e-49 | 1.608437e-46 |
| MsG0180000178.01 | MsG0380016140.01 | 0.831691 | 1.445919e-55 | 1.580956e-52 |
| MsG0180000178.01 | MsG0380016247.01 | 0.829085 | 6.268576e-55 | 6.349369e-52 |
| MsG0180000178.01 | MsG0380016517.01 | 0.802920 | 4.461478e-49 | 2.212460e-46 |
| MsG0180000178.01 | MsG0380016765.01 | 0.813359 | 2.663727e-51 | 1.735870e-48 |
| MsG0180000178.01 | MsG0380016847.01 | 0.806824 | 6.817683e-50 | 3.737311e-47 |
| MsG0180000178.01 | MsG0380016910.01 | 0.843747 | 1.158684e-58 | 1.830481e-55 |
| MsG0180000178.01 | MsG0380016919.01 | 0.831662 | 1.469944e-55 | 1.605833e-52 |
| MsG0180000178.01 | MsG0380016920.01 | 0.835336 | 1.780512e-56 | 2.170907e-53 |
| MsG0180000178.01 | MsG0380016994.01 | 0.844771 | 6.148970e-59 | 1.003218e-55 |
| MsG0180000178.01 | MsG0380017266.01 | -0.816041 | 6.783245e-52 | 4.754848e-49 |
| MsG0180000178.01 | MsG0380017327.01 | 0.811455 | 6.942082e-51 | 4.299166e-48 |
| MsG0180000178.01 | MsG0380017996.01 | 0.851675 | 7.606796e-61 | 1.551362e-57 |
| MsG0180000178.01 | MsG0480018128.01 | 0.834603 | 2.724256e-56 | 3.248994e-53 |
| MsG0180000178.01 | MsG0480018163.01 | 0.839492 | 1.533909e-57 | 2.121862e-54 |
| MsG0180000178.01 | MsG0480018313.01 | 0.816634 | 4.997641e-52 | 3.560247e-49 |
| MsG0180000178.01 | MsG0480018603.01 | 0.811093 | 8.315893e-51 | 5.101107e-48 |
| MsG0180000178.01 | MsG0480019020.01 | 0.837590 | 4.752967e-57 | 6.203058e-54 |
| MsG0180000178.01 | MsG0480019922.01 | 0.835014 | 2.146333e-56 | 2.591458e-53 |
| MsG0180000178.01 | MsG0480020002.01 | 0.808566 | 2.907781e-50 | 1.668150e-47 |
| MsG0180000178.01 | MsG0480020699.01 | 0.804488 | 2.108730e-49 | 1.088636e-46 |
| MsG0180000178.01 | MsG0480020739.01 | 0.805979 | 1.027667e-49 | 5.513161e-47 |
| MsG0180000178.01 | MsG0480020839.01 | 0.817489 | 3.212214e-52 | 2.342628e-49 |
| MsG0180000178.01 | MsG0480020874.01 | 0.834406 | 3.052460e-56 | 3.619160e-53 |
| MsG0180000178.01 | MsG0480020909.01 | 0.824296 | 8.718152e-54 | 7.690153e-51 |
| MsG0180000178.01 | MsG0480021491.01 | 0.816375 | 5.712595e-52 | 4.040908e-49 |
| MsG0180000178.01 | MsG0480021925.01 | 0.803413 | 3.528445e-49 | 1.771955e-46 |
| MsG0180000178.01 | MsG0480022213.01 | -0.802229 | 6.195317e-49 | 3.018598e-46 |
| MsG0180000178.01 | MsG0480022325.01 | 0.830327 | 3.125664e-55 | 3.282529e-52 |
| MsG0180000178.01 | MsG0480022549.01 | 0.813043 | 3.125767e-51 | 2.019418e-48 |
| MsG0180000178.01 | MsG0480022620.01 | 0.804774 | 1.838427e-49 | 9.561688e-47 |
| MsG0180000178.01 | MsG0480022788.01 | 0.817147 | 3.834262e-52 | 2.770118e-49 |
| MsG0180000178.01 | MsG0480022795.01 | 0.831031 | 2.101392e-55 | 2.252904e-52 |
| MsG0180000178.01 | MsG0480022877.01 | 0.820274 | 7.478529e-53 | 5.890624e-50 |
| MsG0180000178.01 | MsG0480022984.01 | 0.801742 | 7.799847e-49 | 3.753510e-46 |
| MsG0180000178.01 | MsG0480023163.01 | 0.825500 | 4.531028e-54 | 4.137164e-51 |
| MsG0180000178.01 | MsG0480023361.01 | 0.808996 | 2.353655e-50 | 1.365623e-47 |
| MsG0180000178.01 | MsG0480023463.01 | 0.844210 | 8.704190e-59 | 1.395282e-55 |
| MsG0180000178.01 | MsG0480023636.01 | 0.818268 | 2.141941e-52 | 1.595736e-49 |
| MsG0180000178.01 | MsG0480023654.01 | 0.815367 | 9.585360e-52 | 6.595825e-49 |
| MsG0180000178.01 | MsG0480023707.01 | 0.854404 | 1.258839e-61 | 2.808070e-58 |
| MsG0180000178.01 | MsG0480023832.01 | 0.815330 | 9.772227e-52 | 6.717462e-49 |
| MsG0180000178.01 | MsG0580024165.01 | 0.805641 | 1.210324e-49 | 6.436781e-47 |
| MsG0180000178.01 | MsG0580024382.01 | 0.868094 | 8.426737e-66 | 3.010825e-62 |
| MsG0180000178.01 | MsG0580024383.01 | 0.805682 | 1.186359e-49 | 6.316218e-47 |
| MsG0180000178.01 | MsG0580024489.01 | 0.803012 | 4.270541e-49 | 2.122580e-46 |
| MsG0180000178.01 | MsG0580025316.01 | 0.810793 | 9.659136e-51 | 5.877998e-48 |
| MsG0180000178.01 | MsG0580025352.01 | 0.801022 | 1.095279e-48 | 5.176366e-46 |
| MsG0180000178.01 | MsG0580026075.01 | 0.832857 | 7.441254e-56 | 8.421793e-53 |
| MsG0180000178.01 | MsG0580026081.01 | 0.828792 | 7.382980e-55 | 7.413870e-52 |
| MsG0180000178.01 | MsG0580026089.01 | 0.817409 | 3.347137e-52 | 2.435722e-49 |
| MsG0180000178.01 | MsG0580026610.01 | 0.804248 | 2.366054e-49 | 1.213948e-46 |
| MsG0180000178.01 | MsG0580027091.01 | 0.852288 | 5.093735e-61 | 1.059390e-57 |
| MsG0180000178.01 | MsG0580027092.01 | 0.821291 | 4.364531e-53 | 3.536282e-50 |
| MsG0180000178.01 | MsG0580027208.01 | 0.818977 | 1.479213e-52 | 1.124000e-49 |
| MsG0180000178.01 | MsG0580027431.01 | 0.845239 | 4.598617e-59 | 7.614436e-56 |
| MsG0180000178.01 | MsG0580027833.01 | 0.809853 | 1.540995e-50 | 9.147687e-48 |
| MsG0180000178.01 | MsG0580028176.01 | 0.805838 | 1.100037e-49 | 5.880145e-47 |
| MsG0180000178.01 | MsG0580028417.01 | 0.800822 | 1.203315e-48 | 5.657725e-46 |
| MsG0180000178.01 | MsG0580028990.01 | 0.841534 | 4.481624e-58 | 6.605022e-55 |
| MsG0180000178.01 | MsG0580029640.01 | 0.828757 | 7.527354e-55 | 7.551007e-52 |
| MsG0180000178.01 | MsG0580029729.01 | 0.807201 | 5.673980e-50 | 3.140942e-47 |
| MsG0180000178.01 | MsG0680030633.01 | 0.801825 | 7.498180e-49 | 3.616170e-46 |
| MsG0180000178.01 | MsG0680030881.01 | 0.813215 | 2.865369e-51 | 1.859738e-48 |
| MsG0180000178.01 | MsG0680030882.01 | 0.807410 | 5.123743e-50 | 2.851871e-47 |
| MsG0180000178.01 | MsG0680030918.01 | 0.806860 | 6.700878e-50 | 3.676735e-47 |
| MsG0180000178.01 | MsG0680031506.01 | 0.803382 | 3.579696e-49 | 1.796242e-46 |
| MsG0180000178.01 | MsG0680031549.01 | 0.834399 | 3.065484e-56 | 3.633683e-53 |
| MsG0180000178.01 | MsG0680032935.01 | 0.829078 | 6.293077e-55 | 6.372761e-52 |
| MsG0180000178.01 | MsG0680033099.01 | 0.807678 | 4.494260e-50 | 2.518868e-47 |
| MsG0180000178.01 | MsG0680033412.01 | 0.801335 | 9.453395e-49 | 4.502871e-46 |
| MsG0180000178.01 | MsG0680035475.01 | 0.827430 | 1.570964e-54 | 1.516326e-51 |
| MsG0180000178.01 | MsG0680035498.01 | 0.804366 | 2.235673e-49 | 1.150607e-46 |
| MsG0180000178.01 | MsG0680035526.01 | 0.808396 | 3.161684e-50 | 1.805843e-47 |
| MsG0180000178.01 | MsG0680035692.01 | 0.813687 | 2.255799e-51 | 1.483161e-48 |
| MsG0180000178.01 | MsG0780035948.01 | 0.804227 | 2.389994e-49 | 1.225573e-46 |
| MsG0180000178.01 | MsG0780036477.01 | 0.860195 | 2.447128e-63 | 6.634277e-60 |
| MsG0180000178.01 | MsG0780036752.01 | 0.841326 | 5.086884e-58 | 7.447536e-55 |
| MsG0180000178.01 | MsG0780036815.01 | 0.852503 | 4.423734e-61 | 9.263127e-58 |
| MsG0180000178.01 | MsG0780037054.01 | 0.835879 | 1.297408e-56 | 1.607692e-53 |
| MsG0180000178.01 | MsG0780038150.01 | 0.833062 | 6.616758e-56 | 7.535395e-53 |
| MsG0180000178.01 | MsG0780038386.01 | 0.833189 | 6.153155e-56 | 7.033727e-53 |
| MsG0180000178.01 | MsG0780038391.01 | 0.830196 | 3.364617e-55 | 3.520401e-52 |
| MsG0180000178.01 | MsG0780038401.01 | 0.837608 | 4.701186e-57 | 6.139144e-54 |
| MsG0180000178.01 | MsG0780038424.01 | 0.842197 | 2.995964e-58 | 4.507764e-55 |
| MsG0180000178.01 | MsG0780038495.01 | 0.808667 | 2.767206e-50 | 1.591649e-47 |
| MsG0180000178.01 | MsG0780039059.01 | 0.835496 | 1.622069e-56 | 1.987011e-53 |
| MsG0180000178.01 | MsG0780039137.01 | 0.842728 | 2.166373e-58 | 3.314130e-55 |
| MsG0180000178.01 | MsG0780039243.01 | 0.840478 | 8.485974e-58 | 1.210218e-54 |
| MsG0180000178.01 | MsG0780039520.01 | 0.812211 | 4.752733e-51 | 3.003503e-48 |
| MsG0180000178.01 | MsG0780039522.01 | 0.802569 | 5.271003e-49 | 2.590578e-46 |
| MsG0180000178.01 | MsG0780039527.01 | 0.813516 | 2.460486e-51 | 1.610223e-48 |
| MsG0180000178.01 | MsG0780039808.01 | 0.806459 | 8.141383e-50 | 4.421450e-47 |
| MsG0180000178.01 | MsG0780039956.01 | 0.837364 | 5.430357e-57 | 7.037370e-54 |
| MsG0180000178.01 | MsG0780040044.01 | 0.806392 | 8.409562e-50 | 4.559031e-47 |
| MsG0180000178.01 | MsG0780040057.01 | 0.860315 | 2.250507e-63 | 6.125608e-60 |
| MsG0180000178.01 | MsG0780040604.01 | 0.824750 | 6.813951e-54 | 6.090722e-51 |
| MsG0180000178.01 | MsG0780040926.01 | 0.835107 | 2.034166e-56 | 2.462647e-53 |
| MsG0180000178.01 | MsG0780041402.01 | 0.824080 | 9.799035e-54 | 8.591447e-51 |
| MsG0180000178.01 | MsG0780041456.01 | 0.814039 | 1.887546e-51 | 1.252896e-48 |
| MsG0180000178.01 | MsG0780041535.01 | 0.803035 | 4.223576e-49 | 2.100575e-46 |
| MsG0180000178.01 | MsG0780041559.01 | 0.800526 | 1.382947e-48 | 6.453668e-46 |
| MsG0180000178.01 | MsG0880041860.01 | 0.804927 | 1.707439e-49 | 8.916116e-47 |
| MsG0180000178.01 | MsG0880041986.01 | 0.859267 | 4.654081e-63 | 1.221918e-59 |
| MsG0180000178.01 | MsG0880042129.01 | 0.806622 | 7.522517e-50 | 4.102024e-47 |
| MsG0180000178.01 | MsG0880042232.01 | 0.818679 | 1.728809e-52 | 1.302657e-49 |
| MsG0180000178.01 | MsG0880042698.01 | 0.817639 | 2.970830e-52 | 2.175423e-49 |
| MsG0180000178.01 | MsG0880042779.01 | 0.805487 | 1.303701e-49 | 6.905959e-47 |
| MsG0180000178.01 | MsG0880042961.01 | 0.845268 | 4.516357e-59 | 7.485795e-56 |
| MsG0180000178.01 | MsG0880043034.01 | 0.802805 | 4.713526e-49 | 2.330716e-46 |
| MsG0180000178.01 | MsG0880043479.01 | 0.820245 | 7.593777e-53 | 5.976500e-50 |
| MsG0180000178.01 | MsG0880043491.01 | 0.810298 | 1.235650e-50 | 7.420544e-48 |
| MsG0180000178.01 | MsG0880043614.01 | 0.867266 | 1.553536e-65 | 5.390183e-62 |
| MsG0180000178.01 | MsG0880044008.01 | 0.816183 | 6.307464e-52 | 4.438309e-49 |
| MsG0180000178.01 | MsG0880044079.01 | 0.844280 | 8.336383e-59 | 1.339174e-55 |
| MsG0180000178.01 | MsG0880044080.01 | 0.855588 | 5.702494e-62 | 1.323142e-58 |
| MsG0180000178.01 | MsG0880044081.01 | 0.846803 | 1.726016e-59 | 3.006256e-56 |
| MsG0180000178.01 | MsG0880044085.01 | 0.845151 | 4.855072e-59 | 8.016194e-56 |
| MsG0180000178.01 | MsG0880044237.01 | 0.805986 | 1.024272e-49 | 5.495984e-47 |
| MsG0180000178.01 | MsG0880044510.01 | 0.808101 | 3.654081e-50 | 2.070871e-47 |
| MsG0180000178.01 | MsG0880044542.01 | 0.817216 | 3.698904e-52 | 2.677454e-49 |
| MsG0180000178.01 | MsG0880044574.01 | 0.827815 | 1.270194e-54 | 1.239698e-51 |
| MsG0180000178.01 | MsG0880044782.01 | 0.843134 | 1.688439e-58 | 2.616195e-55 |
| MsG0180000178.01 | MsG0880045257.01 | 0.801266 | 9.766123e-49 | 4.643742e-46 |
| MsG0180000178.01 | MsG0880045443.01 | 0.825316 | 5.010164e-54 | 4.550899e-51 |
| MsG0180000178.01 | MsG0880045453.01 | 0.800109 | 1.681398e-48 | 7.763839e-46 |
| MsG0180000178.01 | MsG0880045691.01 | 0.837368 | 5.418272e-57 | 7.022512e-54 |
| MsG0180000178.01 | MsG0880045937.01 | 0.804811 | 1.806066e-49 | 9.402772e-47 |
| MsG0180000178.01 | MsG0880046012.01 | 0.866516 | 2.693076e-65 | 9.101936e-62 |
| MsG0180000178.01 | MsG0880046069.01 | 0.807557 | 4.767945e-50 | 2.663823e-47 |
| MsG0180000178.01 | MsG0880046479.01 | 0.815741 | 7.912453e-52 | 5.501220e-49 |
| MsG0180000178.01 | MsG0880046645.01 | 0.831849 | 1.321779e-55 | 1.452136e-52 |
| MsG0180000178.01 | MsG0880046803.01 | 0.835854 | 1.316929e-56 | 1.630553e-53 |
| MsG0180000178.01 | MsG0880047647.01 | 0.804340 | 2.263878e-49 | 1.164334e-46 |
| MsG0180000178.01 | MsG0880047712.01 | 0.803715 | 3.054187e-49 | 1.545710e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000178.01.T01 | MTR_1g021970 | 95.319 | 235 | 2 | 1 | 1 | 235 | 1 | 226 | 8.98e-164 | 451 |
| MsG0180000178.01.T01 | MTR_1g021970 | 94.894 | 235 | 2 | 2 | 1 | 235 | 1 | 225 | 3.24e-161 | 445 |
| MsG0180000178.01.T01 | MTR_3g111670 | 79.668 | 241 | 33 | 5 | 1 | 235 | 1 | 231 | 1.49e-131 | 370 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180000178.01.T01 | AT1G19330 | 73.640 | 239 | 53 | 6 | 1 | 235 | 1 | 233 | 1.46e-107 | 310 |
| MsG0180000178.01.T01 | AT1G19330 | 73.950 | 238 | 48 | 5 | 1 | 235 | 1 | 227 | 1.56e-107 | 310 |
| MsG0180000178.01.T01 | AT1G19330 | 73.950 | 238 | 53 | 5 | 1 | 235 | 1 | 232 | 2.28e-107 | 310 |
| MsG0180000178.01.T01 | AT1G75060 | 67.111 | 225 | 61 | 5 | 11 | 232 | 17 | 231 | 5.08e-97 | 283 |
| MsG0180000178.01.T01 | AT1G75060 | 66.667 | 225 | 61 | 6 | 11 | 232 | 17 | 230 | 2.54e-95 | 279 |
| MsG0180000178.01.T01 | AT1G75060 | 65.761 | 184 | 50 | 5 | 11 | 191 | 17 | 190 | 3.67e-70 | 213 |
Find 97 sgRNAs with CRISPR-Local
Find 157 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATATGGGTGAGTTTCAATT+TGG | 0.212038 | 1:+2430549 | MsG0180000178.01.T01:CDS |
| CATACCAAAGTTGTTGTTAC+TGG | 0.247333 | 1:+2429580 | MsG0180000178.01.T01:CDS |
| GAAGGTTGACTTGAGCAAAT+TGG | 0.273443 | 1:+2430897 | MsG0180000178.01.T01:intron |
| CCTAATGATCTAAGCATTCT+TGG | 0.306623 | 1:-2430686 | None:intergenic |
| CATCTGGCATGGATCAGATA+TGG | 0.313436 | 1:+2430533 | MsG0180000178.01.T01:CDS |
| AGCTGCTCTTTCGATGGGTT+TGG | 0.323968 | 1:-2431051 | None:intergenic |
| CCAAGAATGCTTAGATCATT+AGG | 0.330483 | 1:+2430686 | MsG0180000178.01.T01:CDS |
| GATGAGTTGCAAGTTATTAG+AGG | 0.336175 | 1:+2431595 | MsG0180000178.01.T01:CDS |
| ACCTTGTGACTTGAATCTTC+AGG | 0.374486 | 1:+2431873 | MsG0180000178.01.T01:three_prime_UTR |
| CATTACTAAGTAGTATCTTT+CGG | 0.377739 | 1:+2431766 | MsG0180000178.01.T01:three_prime_UTR |
| TTGGTCTTGGTGGTTGGCAT+TGG | 0.389653 | 1:+2429659 | MsG0180000178.01.T01:CDS |
| TCTTGGTGGTTGGCATTGGC+TGG | 0.391104 | 1:+2429663 | MsG0180000178.01.T01:CDS |
| CTCTGTTGATTCACAGTCCA+AGG | 0.394816 | 1:+2430739 | MsG0180000178.01.T01:CDS |
| GAGGAGTGGTGGGTGGATAG+AGG | 0.395109 | 1:-2429315 | None:intergenic |
| TGTCTGCATTGTGGAGATAT+TGG | 0.404430 | 1:+2430923 | MsG0180000178.01.T01:CDS |
| ATATGGGTGAGTTTCAATTT+GGG | 0.405171 | 1:+2430550 | MsG0180000178.01.T01:CDS |
| TGAATTGTGTAGTGTGGAAT+TGG | 0.405778 | 1:+2432018 | MsG0180000178.01.T01:three_prime_UTR |
| TGGAAATAACCGTACTAAAT+CGG | 0.406762 | 1:+2429600 | MsG0180000178.01.T01:CDS |
| TCGGTTCTTGTTGGTCTTCG+TGG | 0.407495 | 1:+2429619 | MsG0180000178.01.T01:CDS |
| TCAAAGCTGCAAAGAGGCTT+AGG | 0.412016 | 1:+2431623 | MsG0180000178.01.T01:CDS |
| TTAGTAGTAGGTTGATTAAG+AGG | 0.413082 | 1:+2431796 | MsG0180000178.01.T01:three_prime_UTR |
| GGGGTCAATTTCTATGCCTC+AGG | 0.418506 | 1:+2430760 | MsG0180000178.01.T01:CDS |
| GTTAAGAAAGCTGTTGGTCT+TGG | 0.432909 | 1:+2429646 | MsG0180000178.01.T01:CDS |
| TTCGGATCTCAATTAGTAGT+AGG | 0.443097 | 1:+2431784 | MsG0180000178.01.T01:three_prime_UTR |
| AGAGAATGAAGAGGAGTGGT+GGG | 0.448953 | 1:-2429325 | None:intergenic |
| CCTTGTGACTTGAATCTTCA+GGG | 0.452656 | 1:+2431874 | MsG0180000178.01.T01:three_prime_UTR |
| ATTTCCAGTAACAACAACTT+TGG | 0.459498 | 1:-2429584 | None:intergenic |
| CGTACTAAATCGGTTCTTGT+TGG | 0.461204 | 1:+2429610 | MsG0180000178.01.T01:CDS |
| AAGAAAGCTGTTGGTCTTGG+TGG | 0.462904 | 1:+2429649 | MsG0180000178.01.T01:CDS |
| CTTGCTGCTCACATGGGAAG+TGG | 0.465516 | 1:+2431935 | MsG0180000178.01.T01:three_prime_UTR |
| AAGAGAATGAAGAGGAGTGG+TGG | 0.470329 | 1:-2429326 | None:intergenic |
| CATTCTTGGCCTTGATCTGT+AGG | 0.480531 | 1:-2430672 | None:intergenic |
| TTGAATTTGAAAATACCATC+TGG | 0.487944 | 1:+2430517 | MsG0180000178.01.T01:CDS |
| CAGCTTCACTTCAATACCAT+TGG | 0.494520 | 1:-2430436 | None:intergenic |
| AGGCATAGAAATTGACCCCT+TGG | 0.495573 | 1:-2430756 | None:intergenic |
| TAATGTACTTGCTGCTCACA+TGG | 0.497237 | 1:+2431928 | MsG0180000178.01.T01:three_prime_UTR |
| CTACGAGCTGCTCTTTCGAT+GGG | 0.498457 | 1:-2431056 | None:intergenic |
| GTCATCGTCTTCCTCGAGAC+CGG | 0.501405 | 1:-2430493 | None:intergenic |
| TCTACGAGCTGCTCTTTCGA+TGG | 0.503645 | 1:-2431057 | None:intergenic |
| TCTGTTGATTCACAGTCCAA+GGG | 0.503809 | 1:+2430740 | MsG0180000178.01.T01:CDS |
| CACAAAAGTCCTACAGATCA+AGG | 0.510418 | 1:+2430663 | MsG0180000178.01.T01:CDS |
| ACGAGAGAGAAAGAACGAAT+GGG | 0.525564 | 1:-2429226 | None:intergenic |
| GATTGAAATGTTGGAAGCAA+TGG | 0.526346 | 1:+2429471 | MsG0180000178.01.T01:exon |
| ATCTGGCATGGATCAGATAT+GGG | 0.529761 | 1:+2430534 | MsG0180000178.01.T01:CDS |
| ATTCGTTCTTTCTCTCTCGT+CGG | 0.533709 | 1:+2429229 | MsG0180000178.01.T01:five_prime_UTR |
| TTCTATGCCTCAGGGGTGGA+CGG | 0.534012 | 1:+2430769 | MsG0180000178.01.T01:CDS |
| TTGGTTTGTGCATCGACGCA+TGG | 0.534807 | 1:+2432037 | MsG0180000178.01.T01:three_prime_UTR |
| TTGCTGCTCACATGGGAAGT+GGG | 0.537063 | 1:+2431936 | MsG0180000178.01.T01:three_prime_UTR |
| AGTGTGATTGAACCACCAAC+CGG | 0.537912 | 1:+2430474 | MsG0180000178.01.T01:CDS |
| ATATGAATATCCACTTCCCT+TGG | 0.541035 | 1:+2431724 | MsG0180000178.01.T01:three_prime_UTR |
| TTACATGGTACCAAGGGAAG+TGG | 0.541130 | 1:-2431734 | None:intergenic |
| GAATGAAGAGGAGTGGTGGG+TGG | 0.541696 | 1:-2429322 | None:intergenic |
| ATAGATCGAAACTGTGATCA+TGG | 0.542305 | 1:-2429399 | None:intergenic |
| GATCATTAGGATCATCTCAC+AGG | 0.547105 | 1:+2430699 | MsG0180000178.01.T01:CDS |
| TCAGAGGCATTTCATGTCGC+AGG | 0.548273 | 1:+2431086 | MsG0180000178.01.T01:CDS |
| AAGCTGCAAAGAGGCTTAGG+AGG | 0.549495 | 1:+2431626 | MsG0180000178.01.T01:CDS |
| ACATTATAATCAAAAGCTAA+AGG | 0.551860 | 1:-2431911 | None:intergenic |
| GACGAGAGAGAAAGAACGAA+TGG | 0.554792 | 1:-2429227 | None:intergenic |
| TTTGAAAATACCATCTGGCA+TGG | 0.557029 | 1:+2430522 | MsG0180000178.01.T01:CDS |
| CAACAAGAACCGATTTAGTA+CGG | 0.559704 | 1:-2429609 | None:intergenic |
| CCCTGAAGATTCAAGTCACA+AGG | 0.563556 | 1:-2431874 | None:intergenic |
| ATATTGGCGACACTTCAATC+TGG | 0.569350 | 1:+2430939 | MsG0180000178.01.T01:CDS |
| AAGCTGTTGGTCTTGGTGGT+TGG | 0.570137 | 1:+2429653 | MsG0180000178.01.T01:CDS |
| AATGTGCAGGTTCTTACCAA+TGG | 0.571599 | 1:+2430420 | MsG0180000178.01.T01:intron |
| GAGAGAGAAAGAGAATGAAG+AGG | 0.571656 | 1:-2429334 | None:intergenic |
| TCTTCCTCGAGACCGGTTGG+TGG | 0.579056 | 1:-2430486 | None:intergenic |
| GCAATGGAAAGTTCAGTGAA+TGG | 0.583506 | 1:+2429487 | MsG0180000178.01.T01:CDS |
| AGAAAGAGAATGAAGAGGAG+TGG | 0.587556 | 1:-2429329 | None:intergenic |
| GGGTCAATTTCTATGCCTCA+GGG | 0.589986 | 1:+2430761 | MsG0180000178.01.T01:CDS |
| CATATCTGATCCATGCCAGA+TGG | 0.593266 | 1:-2430532 | None:intergenic |
| AAATATATTACATGGTACCA+AGG | 0.594090 | 1:-2431741 | None:intergenic |
| GGTGTTGTTAAGAAAGCTGT+TGG | 0.600631 | 1:+2429640 | MsG0180000178.01.T01:CDS |
| TCGTCTTCCTCGAGACCGGT+TGG | 0.600634 | 1:-2430489 | None:intergenic |
| CGAGAGAGAAAGAACGAATG+GGG | 0.607811 | 1:-2429225 | None:intergenic |
| CAATTTCTATGCCTCAGGGG+TGG | 0.610942 | 1:+2430765 | MsG0180000178.01.T01:CDS |
| TAGTGATGATCATGCATTGA+GGG | 0.612578 | 1:-2429376 | None:intergenic |
| TGAACCACCAACCGGTCTCG+AGG | 0.615263 | 1:+2430482 | MsG0180000178.01.T01:CDS |
| CATGAATGAATTGTGTAGTG+TGG | 0.619979 | 1:+2432012 | MsG0180000178.01.T01:three_prime_UTR |
| GTGCAGAGGAGAGAGAGTGT+TGG | 0.620738 | 1:-2429259 | None:intergenic |
| GTATTGAAGTGAAGCTGCAG+AGG | 0.621922 | 1:+2430442 | MsG0180000178.01.T01:CDS |
| TTCATTCATGAGAATAAACA+AGG | 0.622932 | 1:-2431999 | None:intergenic |
| AATATATTACATGGTACCAA+GGG | 0.622945 | 1:-2431740 | None:intergenic |
| GGACTGTGAATCAACAGAGA+AGG | 0.625537 | 1:-2430735 | None:intergenic |
| GATTTGTCAAAGCTGCAAAG+AGG | 0.634961 | 1:+2431617 | MsG0180000178.01.T01:CDS |
| GTAATGCTAAATATATTACA+TGG | 0.637984 | 1:-2431749 | None:intergenic |
| ATGGAAAGTTCAGTGAATGG+TGG | 0.641018 | 1:+2429490 | MsG0180000178.01.T01:CDS |
| AATGTACTTGCTGCTCACAT+GGG | 0.650448 | 1:+2431929 | MsG0180000178.01.T01:three_prime_UTR |
| AGCTCGTAGATGTTGTTCAG+AGG | 0.657397 | 1:+2431070 | MsG0180000178.01.T01:CDS |
| AATTGGAAATGTCTGCATTG+TGG | 0.659073 | 1:+2430914 | MsG0180000178.01.T01:CDS |
| GAGAGAGAAAGAACGAATGG+GGG | 0.677252 | 1:-2429224 | None:intergenic |
| TATACACATTCACAAGTCTG+AGG | 0.678875 | 1:-2431962 | None:intergenic |
| GTTAGTGAGAGACAGTGCAG+AGG | 0.678948 | 1:-2429273 | None:intergenic |
| CTGTTGATTCACAGTCCAAG+GGG | 0.680824 | 1:+2430741 | MsG0180000178.01.T01:CDS |
| ACAACAACTTTGGTATGACG+AGG | 0.693978 | 1:-2429574 | None:intergenic |
| ATATATACCGTCCACCCCTG+AGG | 0.713549 | 1:-2430776 | None:intergenic |
| GGTCAATTTCTATGCCTCAG+GGG | 0.731555 | 1:+2430762 | MsG0180000178.01.T01:CDS |
| GTAGTGATGATCATGCATTG+AGG | 0.753546 | 1:-2429377 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTATACATTTTTAAGTAT+TGG | + | Chr1:2429892-2429911 | MsG0180000178.01.T01:intron | 10.0% |
| !!! | AGTTTTTTTCATATTTTATT+TGG | + | Chr1:2430290-2430309 | MsG0180000178.01.T01:intron | 10.0% |
| !!! | ATTATACATTTTTAAGTATT+GGG | + | Chr1:2429893-2429912 | MsG0180000178.01.T01:intron | 10.0% |
| !!! | ATTTGAAAATATTTAATTTG+AGG | - | Chr1:2431412-2431431 | None:intergenic | 10.0% |
| !!! | TCAAATTAAATATTTTCAAA+TGG | + | Chr1:2431411-2431430 | MsG0180000178.01.T01:intron | 10.0% |
| !! | AAAAAAAATCAAAACTTTGA+AGG | - | Chr1:2429440-2429459 | None:intergenic | 15.0% |
| !! | TAGGAAAATTTGAATAAAAT+TGG | - | Chr1:2430152-2430171 | None:intergenic | 15.0% |
| !!! | AGATTTTTACTCTTTAAAAT+AGG | - | Chr1:2430171-2430190 | None:intergenic | 15.0% |
| !!! | CATTTTTTTTATCATCAAAA+TGG | + | Chr1:2429705-2429724 | MsG0180000178.01.T01:intron | 15.0% |
| !!! | TTTTTGGTTTTTAATTTGAA+TGG | + | Chr1:2429941-2429960 | MsG0180000178.01.T01:intron | 15.0% |
| !! | AATGGAGCTTAATTTATTTA+TGG | + | Chr1:2429959-2429978 | MsG0180000178.01.T01:intron | 20.0% |
| !! | AATTCAGTAAATTCTTTACT+AGG | - | Chr1:2431389-2431408 | None:intergenic | 20.0% |
| !! | ACATTATAATCAAAAGCTAA+AGG | - | Chr1:2431914-2431933 | None:intergenic | 20.0% |
| !! | ATTCAGTAAATTCTTTACTA+GGG | - | Chr1:2431388-2431407 | None:intergenic | 20.0% |
| !! | GTAATGCTAAATATATTACA+TGG | - | Chr1:2431752-2431771 | None:intergenic | 20.0% |
| !! | TAAGCTTAAACATCAAAATT+GGG | + | Chr1:2431009-2431028 | MsG0180000178.01.T01:intron | 20.0% |
| !! | TATTGTTGTGGAAAAAAAAT+TGG | + | Chr1:2429917-2429936 | MsG0180000178.01.T01:intron | 20.0% |
| !!! | TGGAAAAAAAATTGGATTTT+TGG | + | Chr1:2429925-2429944 | MsG0180000178.01.T01:intron | 20.0% |
| ! | AAATATATTACATGGTACCA+AGG | - | Chr1:2431744-2431763 | None:intergenic | 25.0% |
| ! | AATATATTACATGGTACCAA+GGG | - | Chr1:2431743-2431762 | None:intergenic | 25.0% |
| ! | CATTACTAAGTAGTATCTTT+CGG | + | Chr1:2431766-2431785 | MsG0180000178.01.T01:three_prime_UTR | 25.0% |
| ! | GCTTAATTTATTTATGGATC+TGG | + | Chr1:2429965-2429984 | MsG0180000178.01.T01:intron | 25.0% |
| ! | GTAAGCTTAAACATCAAAAT+TGG | + | Chr1:2431008-2431027 | MsG0180000178.01.T01:intron | 25.0% |
| ! | TATTGAAAATATCGTGTAGA+AGG | + | Chr1:2430879-2430898 | MsG0180000178.01.T01:intron | 25.0% |
| ! | TTCAATTGCTCAATTCATTT+GGG | + | Chr1:2429860-2429879 | MsG0180000178.01.T01:intron | 25.0% |
| ! | TTCAGTAAATTCTTTACTAG+GGG | - | Chr1:2431387-2431406 | None:intergenic | 25.0% |
| ! | TTCATTCATGAGAATAAACA+AGG | - | Chr1:2432002-2432021 | None:intergenic | 25.0% |
| ! | TTGAATTTGAAAATACCATC+TGG | + | Chr1:2430517-2430536 | MsG0180000178.01.T01:CDS | 25.0% |
| ! | TTGTTTGTTTATGAAGCAAA+TGG | + | Chr1:2431573-2431592 | MsG0180000178.01.T01:intron | 25.0% |
| !! | AGATGGTATTTTCAAATTCA+AGG | - | Chr1:2430518-2430537 | None:intergenic | 25.0% |
| !! | TGCTTGATTTTGAATTTTGA+TGG | + | Chr1:2430026-2430045 | MsG0180000178.01.T01:intron | 25.0% |
| !!! | GTTTTCATTGATTGAAATGT+TGG | + | Chr1:2429462-2429481 | MsG0180000178.01.T01:exon | 25.0% |
| !!! | TTTTGAATTTTGATGGTCAA+TGG | + | Chr1:2430033-2430052 | MsG0180000178.01.T01:intron | 25.0% |
| AGCCTATCTACATAAAAACT+AGG | - | Chr1:2431853-2431872 | None:intergenic | 30.0% | |
| ATATGGGTGAGTTTCAATTT+GGG | + | Chr1:2430550-2430569 | MsG0180000178.01.T01:CDS | 30.0% | |
| ATTTCCAGTAACAACAACTT+TGG | - | Chr1:2429587-2429606 | None:intergenic | 30.0% | |
| CAACCAAATAACATTGTTAC+AGG | - | Chr1:2431168-2431187 | None:intergenic | 30.0% | |
| CTTCAATTGCTCAATTCATT+TGG | + | Chr1:2429859-2429878 | MsG0180000178.01.T01:intron | 30.0% | |
| GGTACATTATTGTTTGCATT+AGG | + | Chr1:2431107-2431126 | MsG0180000178.01.T01:intron | 30.0% | |
| GTTCCTGTAACAATGTTATT+TGG | + | Chr1:2431162-2431181 | MsG0180000178.01.T01:intron | 30.0% | |
| TCAGTAAATTCTTTACTAGG+GGG | - | Chr1:2431386-2431405 | None:intergenic | 30.0% | |
| TCATACAATTGTTGCATGTA+TGG | + | Chr1:2430373-2430392 | MsG0180000178.01.T01:intron | 30.0% | |
| TGGAAATAACCGTACTAAAT+CGG | + | Chr1:2429600-2429619 | MsG0180000178.01.T01:CDS | 30.0% | |
| TTGTTTCATGAAAAATGTGC+AGG | + | Chr1:2430407-2430426 | MsG0180000178.01.T01:intron | 30.0% | |
| !! | CAACATTTTCAAAGCTTTGT+TGG | + | Chr1:2429520-2429539 | MsG0180000178.01.T01:CDS | 30.0% |
| !! | CACCTAGTTTTTATGTAGAT+AGG | + | Chr1:2431848-2431867 | MsG0180000178.01.T01:three_prime_UTR | 30.0% |
| !! | TAAGTATTGGGTTATTGTTG+TGG | + | Chr1:2429905-2429924 | MsG0180000178.01.T01:intron | 30.0% |
| !! | TTAGTAGTAGGTTGATTAAG+AGG | + | Chr1:2431796-2431815 | MsG0180000178.01.T01:three_prime_UTR | 30.0% |
| AACATCAAAATTGGGTATGC+AGG | + | Chr1:2431017-2431036 | MsG0180000178.01.T01:intron | 35.0% | |
| AATTGGAAATGTCTGCATTG+TGG | + | Chr1:2430914-2430933 | MsG0180000178.01.T01:CDS | 35.0% | |
| AGGAGAGAGAGAAGAAAAAT+GGG | - | Chr1:2429298-2429317 | None:intergenic | 35.0% | |
| ATAGATCGAAACTGTGATCA+TGG | - | Chr1:2429402-2429421 | None:intergenic | 35.0% | |
| ATATGAATATCCACTTCCCT+TGG | + | Chr1:2431724-2431743 | MsG0180000178.01.T01:three_prime_UTR | 35.0% | |
| ATTTGGTTGAACACTGTATG+TGG | + | Chr1:2431179-2431198 | MsG0180000178.01.T01:intron | 35.0% | |
| CACAAACAAAATCAGCAATC+GGG | - | Chr1:2430613-2430632 | None:intergenic | 35.0% | |
| CAGTAAATTCTTTACTAGGG+GGG | - | Chr1:2431385-2431404 | None:intergenic | 35.0% | |
| CATGAATGAATTGTGTAGTG+TGG | + | Chr1:2432012-2432031 | MsG0180000178.01.T01:three_prime_UTR | 35.0% | |
| CCAAGAATGCTTAGATCATT+AGG | + | Chr1:2430686-2430705 | MsG0180000178.01.T01:CDS | 35.0% | |
| CCTAATGATCTAAGCATTCT+TGG | - | Chr1:2430689-2430708 | None:intergenic | 35.0% | |
| GATATGGGTGAGTTTCAATT+TGG | + | Chr1:2430549-2430568 | MsG0180000178.01.T01:CDS | 35.0% | |
| GATGAGTTGCAAGTTATTAG+AGG | + | Chr1:2431595-2431614 | MsG0180000178.01.T01:CDS | 35.0% | |
| GATTGAAATGTTGGAAGCAA+TGG | + | Chr1:2429471-2429490 | MsG0180000178.01.T01:exon | 35.0% | |
| GCACAAACAAAATCAGCAAT+CGG | - | Chr1:2430614-2430633 | None:intergenic | 35.0% | |
| TAGTGATGATCATGCATTGA+GGG | - | Chr1:2429379-2429398 | None:intergenic | 35.0% | |
| TATACACATTCACAAGTCTG+AGG | - | Chr1:2431965-2431984 | None:intergenic | 35.0% | |
| TATGTGGTTCCAATCAGATT+TGG | + | Chr1:2431195-2431214 | MsG0180000178.01.T01:intron | 35.0% | |
| TGAATTGTGTAGTGTGGAAT+TGG | + | Chr1:2432018-2432037 | MsG0180000178.01.T01:three_prime_UTR | 35.0% | |
| TTCGGATCTCAATTAGTAGT+AGG | + | Chr1:2431784-2431803 | MsG0180000178.01.T01:three_prime_UTR | 35.0% | |
| TTTGAAAATACCATCTGGCA+TGG | + | Chr1:2430522-2430541 | MsG0180000178.01.T01:CDS | 35.0% | |
| ! | CAACAAGAACCGATTTAGTA+CGG | - | Chr1:2429612-2429631 | None:intergenic | 35.0% |
| ! | CATACCAAAGTTGTTGTTAC+TGG | + | Chr1:2429580-2429599 | MsG0180000178.01.T01:CDS | 35.0% |
| ! | GAATCTTCAGGGAAGTTTTA+AGG | + | Chr1:2431885-2431904 | MsG0180000178.01.T01:three_prime_UTR | 35.0% |
| !! | GATCTTTGCAACTCACTTTT+TGG | + | Chr1:2430068-2430087 | MsG0180000178.01.T01:intron | 35.0% |
| !!! | TGCAACTCACTTTTTGGTTT+TGG | + | Chr1:2430074-2430093 | MsG0180000178.01.T01:intron | 35.0% |
| AATCAGATTTGGATTCCTCG+TGG | + | Chr1:2431206-2431225 | MsG0180000178.01.T01:intron | 40.0% | |
| AATGTGCAGGTTCTTACCAA+TGG | + | Chr1:2430420-2430439 | MsG0180000178.01.T01:intron | 40.0% | |
| ACAACAACTTTGGTATGACG+AGG | - | Chr1:2429577-2429596 | None:intergenic | 40.0% | |
| ACCTTGTGACTTGAATCTTC+AGG | + | Chr1:2431873-2431892 | MsG0180000178.01.T01:three_prime_UTR | 40.0% | |
| ACGAGAGAGAAAGAACGAAT+GGG | - | Chr1:2429229-2429248 | None:intergenic | 40.0% | |
| ACGAGGAATCCAAATCTGAT+TGG | - | Chr1:2431207-2431226 | None:intergenic | 40.0% | |
| AGAAAGAGAATGAAGAGGAG+TGG | - | Chr1:2429332-2429351 | None:intergenic | 40.0% | |
| ATATTGGCGACACTTCAATC+TGG | + | Chr1:2430939-2430958 | MsG0180000178.01.T01:CDS | 40.0% | |
| ATCAAAATTGGGTATGCAGG+TGG | + | Chr1:2431020-2431039 | MsG0180000178.01.T01:intron | 40.0% | |
| ATCTGGCATGGATCAGATAT+GGG | + | Chr1:2430534-2430553 | MsG0180000178.01.T01:CDS | 40.0% | |
| ATGGAAAGTTCAGTGAATGG+TGG | + | Chr1:2429490-2429509 | MsG0180000178.01.T01:CDS | 40.0% | |
| ATTCGTTCTTTCTCTCTCGT+CGG | + | Chr1:2429229-2429248 | MsG0180000178.01.T01:five_prime_UTR | 40.0% | |
| CACAAAAGTCCTACAGATCA+AGG | + | Chr1:2430663-2430682 | MsG0180000178.01.T01:CDS | 40.0% | |
| CAGCAATCGGGAAAATCAAA+AGG | - | Chr1:2430601-2430620 | None:intergenic | 40.0% | |
| CAGCTTCACTTCAATACCAT+TGG | - | Chr1:2430439-2430458 | None:intergenic | 40.0% | |
| CATTCACAAAGTCGACACAT+TGG | + | Chr1:2431243-2431262 | MsG0180000178.01.T01:intron | 40.0% | |
| CCTTGTGACTTGAATCTTCA+GGG | + | Chr1:2431874-2431893 | MsG0180000178.01.T01:three_prime_UTR | 40.0% | |
| GAGAGAGAAAGAGAATGAAG+AGG | - | Chr1:2429337-2429356 | None:intergenic | 40.0% | |
| GAGGAGAGAGAGAAGAAAAA+TGG | - | Chr1:2429299-2429318 | None:intergenic | 40.0% | |
| GATCATTAGGATCATCTCAC+AGG | + | Chr1:2430699-2430718 | MsG0180000178.01.T01:CDS | 40.0% | |
| GATTTGTCAAAGCTGCAAAG+AGG | + | Chr1:2431617-2431636 | MsG0180000178.01.T01:CDS | 40.0% | |
| GCAATGGAAAGTTCAGTGAA+TGG | + | Chr1:2429487-2429506 | MsG0180000178.01.T01:CDS | 40.0% | |
| GTAGTGATGATCATGCATTG+AGG | - | Chr1:2429380-2429399 | None:intergenic | 40.0% | |
| TGTCTGCATTGTGGAGATAT+TGG | + | Chr1:2430923-2430942 | MsG0180000178.01.T01:CDS | 40.0% | |
| ! | AATGTACTTGCTGCTCACAT+GGG | + | Chr1:2431929-2431948 | MsG0180000178.01.T01:three_prime_UTR | 40.0% |
| ! | CGTACTAAATCGGTTCTTGT+TGG | + | Chr1:2429610-2429629 | MsG0180000178.01.T01:CDS | 40.0% |
| ! | GTTAAGAAAGCTGTTGGTCT+TGG | + | Chr1:2429646-2429665 | MsG0180000178.01.T01:CDS | 40.0% |
| ! | TAATGTACTTGCTGCTCACA+TGG | + | Chr1:2431928-2431947 | MsG0180000178.01.T01:three_prime_UTR | 40.0% |
| !! | GAAGGTTGACTTGAGCAAAT+TGG | + | Chr1:2430897-2430916 | MsG0180000178.01.T01:intron | 40.0% |
| !! | GGTGTTGTTAAGAAAGCTGT+TGG | + | Chr1:2429640-2429659 | MsG0180000178.01.T01:CDS | 40.0% |
| !! | TCTGTTGATTCACAGTCCAA+GGG | + | Chr1:2430740-2430759 | MsG0180000178.01.T01:CDS | 40.0% |
| !!! | TCTTTTTTGTTGCTGTTGCG+TGG | + | Chr1:2430982-2431001 | MsG0180000178.01.T01:intron | 40.0% |
| AAGAGAATGAAGAGGAGTGG+TGG | - | Chr1:2429329-2429348 | None:intergenic | 45.0% | |
| AGAGAATGAAGAGGAGTGGT+GGG | - | Chr1:2429328-2429347 | None:intergenic | 45.0% | |
| AGCTCGTAGATGTTGTTCAG+AGG | + | Chr1:2431070-2431089 | MsG0180000178.01.T01:CDS | 45.0% | |
| AGGCATAGAAATTGACCCCT+TGG | - | Chr1:2430759-2430778 | None:intergenic | 45.0% | |
| AGTGTGATTGAACCACCAAC+CGG | + | Chr1:2430474-2430493 | MsG0180000178.01.T01:CDS | 45.0% | |
| ATCAGCACATCAGTGATTGC+TGG | - | Chr1:2431313-2431332 | None:intergenic | 45.0% | |
| CATATCTGATCCATGCCAGA+TGG | - | Chr1:2430535-2430554 | None:intergenic | 45.0% | |
| CATCTGGCATGGATCAGATA+TGG | + | Chr1:2430533-2430552 | MsG0180000178.01.T01:CDS | 45.0% | |
| CCCTGAAGATTCAAGTCACA+AGG | - | Chr1:2431877-2431896 | None:intergenic | 45.0% | |
| GACGAGAGAGAAAGAACGAA+TGG | - | Chr1:2429230-2429249 | None:intergenic | 45.0% | |
| GCAAAATGCGAGCAAACCAA+AGG | - | Chr1:2431273-2431292 | None:intergenic | 45.0% | |
| GGACTGTGAATCAACAGAGA+AGG | - | Chr1:2430738-2430757 | None:intergenic | 45.0% | |
| GGGTCAATTTCTATGCCTCA+GGG | + | Chr1:2430761-2430780 | MsG0180000178.01.T01:CDS | 45.0% | |
| GGTCAATTTCTATGCCTCAG+GGG | + | Chr1:2430762-2430781 | MsG0180000178.01.T01:CDS | 45.0% | |
| GTATTGAAGTGAAGCTGCAG+AGG | + | Chr1:2430442-2430461 | MsG0180000178.01.T01:CDS | 45.0% | |
| TCAAAGCTGCAAAGAGGCTT+AGG | + | Chr1:2431623-2431642 | MsG0180000178.01.T01:CDS | 45.0% | |
| TCGACACATTGGTGAACCTT+TGG | + | Chr1:2431254-2431273 | MsG0180000178.01.T01:intron | 45.0% | |
| TTACATGGTACCAAGGGAAG+TGG | - | Chr1:2431737-2431756 | None:intergenic | 45.0% | |
| TTCTTTACTAGGGGGGAGAT+TGG | - | Chr1:2431378-2431397 | None:intergenic | 45.0% | |
| ! | GTGTGTAATTTGTGACCACG+AGG | - | Chr1:2431224-2431243 | None:intergenic | 45.0% |
| !! | AAGAAAGCTGTTGGTCTTGG+TGG | + | Chr1:2429649-2429668 | MsG0180000178.01.T01:CDS | 45.0% |
| !! | CATTCTTGGCCTTGATCTGT+AGG | - | Chr1:2430675-2430694 | None:intergenic | 45.0% |
| !! | CTCTGTTGATTCACAGTCCA+AGG | + | Chr1:2430739-2430758 | MsG0180000178.01.T01:CDS | 45.0% |
| !! | CTGTTGATTCACAGTCCAAG+GGG | + | Chr1:2430741-2430760 | MsG0180000178.01.T01:CDS | 45.0% |
| AAGCTGCAAAGAGGCTTAGG+AGG | + | Chr1:2431626-2431645 | MsG0180000178.01.T01:CDS | 50.0% | |
| ATATATACCGTCCACCCCTG+AGG | - | Chr1:2430779-2430798 | None:intergenic | 50.0% | |
| CAATTTCTATGCCTCAGGGG+TGG | + | Chr1:2430765-2430784 | MsG0180000178.01.T01:CDS | 50.0% | |
| CTACGAGCTGCTCTTTCGAT+GGG | - | Chr1:2431059-2431078 | None:intergenic | 50.0% | |
| CTGCATGAGATTGTGTCTGC+AGG | + | Chr1:2431337-2431356 | MsG0180000178.01.T01:intron | 50.0% | |
| GGGGTCAATTTCTATGCCTC+AGG | + | Chr1:2430760-2430779 | MsG0180000178.01.T01:CDS | 50.0% | |
| GTTAGTGAGAGACAGTGCAG+AGG | - | Chr1:2429276-2429295 | None:intergenic | 50.0% | |
| TACTAGGGGGGAGATTGGAA+TGG | - | Chr1:2431373-2431392 | None:intergenic | 50.0% | |
| TCTACGAGCTGCTCTTTCGA+TGG | - | Chr1:2431060-2431079 | None:intergenic | 50.0% | |
| TTGCTGCTCACATGGGAAGT+GGG | + | Chr1:2431936-2431955 | MsG0180000178.01.T01:three_prime_UTR | 50.0% | |
| ! | AGCTGCTCTTTCGATGGGTT+TGG | - | Chr1:2431054-2431073 | None:intergenic | 50.0% |
| ! | GGGGGAGATTGGAATGGATT+TGG | - | Chr1:2431367-2431386 | None:intergenic | 50.0% |
| !! | AAGCTGTTGGTCTTGGTGGT+TGG | + | Chr1:2429653-2429672 | MsG0180000178.01.T01:CDS | 50.0% |
| !! | TCAGAGGCATTTCATGTCGC+AGG | + | Chr1:2431086-2431105 | MsG0180000178.01.T01:CDS | 50.0% |
| !! | TCGGTTCTTGTTGGTCTTCG+TGG | + | Chr1:2429619-2429638 | MsG0180000178.01.T01:CDS | 50.0% |
| !! | TTGGTCTTGGTGGTTGGCAT+TGG | + | Chr1:2429659-2429678 | MsG0180000178.01.T01:CDS | 50.0% |
| !! | TTGGTTTGTGCATCGACGCA+TGG | + | Chr1:2432037-2432056 | MsG0180000178.01.T01:three_prime_UTR | 50.0% |
| CTTGCTGCTCACATGGGAAG+TGG | + | Chr1:2431935-2431954 | MsG0180000178.01.T01:three_prime_UTR | 55.0% | |
| GTCATCGTCTTCCTCGAGAC+CGG | - | Chr1:2430496-2430515 | None:intergenic | 55.0% | |
| TTCTATGCCTCAGGGGTGGA+CGG | + | Chr1:2430769-2430788 | MsG0180000178.01.T01:CDS | 55.0% | |
| ! | GAATGAAGAGGAGTGGTGGG+TGG | - | Chr1:2429325-2429344 | None:intergenic | 55.0% |
| ! | GTGCAGAGGAGAGAGAGTGT+TGG | - | Chr1:2429262-2429281 | None:intergenic | 55.0% |
| !! | TCTTGGTGGTTGGCATTGGC+TGG | + | Chr1:2429663-2429682 | MsG0180000178.01.T01:CDS | 55.0% |
| TCGTCTTCCTCGAGACCGGT+TGG | - | Chr1:2430492-2430511 | None:intergenic | 60.0% | |
| TCTTCCTCGAGACCGGTTGG+TGG | - | Chr1:2430489-2430508 | None:intergenic | 60.0% | |
| TGAACCACCAACCGGTCTCG+AGG | + | Chr1:2430482-2430501 | MsG0180000178.01.T01:CDS | 60.0% | |
| !! | GAGGAGTGGTGGGTGGATAG+AGG | - | Chr1:2429318-2429337 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 2429226 | 2432073 | 2429226 | ID=MsG0180000178.01;Name=MsG0180000178.01 |
| Chr1 | mRNA | 2429226 | 2432073 | 2429226 | ID=MsG0180000178.01.T01;Parent=MsG0180000178.01;Name=MsG0180000178.01.T01;_AED=0.27;_eAED=0.29;_QI=252|0.8|0.83|1|1|1|6|410|235 |
| Chr1 | exon | 2431589 | 2432073 | 2431589 | ID=MsG0180000178.01.T01:exon:6594;Parent=MsG0180000178.01.T01 |
| Chr1 | exon | 2431039 | 2431107 | 2431039 | ID=MsG0180000178.01.T01:exon:6593;Parent=MsG0180000178.01.T01 |
| Chr1 | exon | 2430898 | 2430960 | 2430898 | ID=MsG0180000178.01.T01:exon:6592;Parent=MsG0180000178.01.T01 |
| Chr1 | exon | 2430651 | 2430790 | 2430651 | ID=MsG0180000178.01.T01:exon:6591;Parent=MsG0180000178.01.T01 |
| Chr1 | exon | 2430429 | 2430582 | 2430429 | ID=MsG0180000178.01.T01:exon:6590;Parent=MsG0180000178.01.T01 |
| Chr1 | exon | 2429226 | 2429684 | 2429226 | ID=MsG0180000178.01.T01:exon:6589;Parent=MsG0180000178.01.T01 |
| Chr1 | five_prime_UTR | 2429226 | 2429477 | 2429226 | ID=MsG0180000178.01.T01:five_prime_utr;Parent=MsG0180000178.01.T01 |
| Chr1 | CDS | 2429478 | 2429684 | 2429478 | ID=MsG0180000178.01.T01:cds;Parent=MsG0180000178.01.T01 |
| Chr1 | CDS | 2430429 | 2430582 | 2430429 | ID=MsG0180000178.01.T01:cds;Parent=MsG0180000178.01.T01 |
| Chr1 | CDS | 2430651 | 2430790 | 2430651 | ID=MsG0180000178.01.T01:cds;Parent=MsG0180000178.01.T01 |
| Chr1 | CDS | 2430898 | 2430960 | 2430898 | ID=MsG0180000178.01.T01:cds;Parent=MsG0180000178.01.T01 |
| Chr1 | CDS | 2431039 | 2431107 | 2431039 | ID=MsG0180000178.01.T01:cds;Parent=MsG0180000178.01.T01 |
| Chr1 | CDS | 2431589 | 2431663 | 2431589 | ID=MsG0180000178.01.T01:cds;Parent=MsG0180000178.01.T01 |
| Chr1 | three_prime_UTR | 2431664 | 2432073 | 2431664 | ID=MsG0180000178.01.T01:three_prime_utr;Parent=MsG0180000178.01.T01 |
| Gene Sequence |
| Protein sequence |
