AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580026474.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580026474.01.T01 MTR_2g036470 63.145 407 132 4 15 418 5 396 8.46e-178 501
MsG0580026474.01.T01 MTR_5g039490 53.171 410 151 6 13 417 2 375 6.37e-137 397
MsG0580026474.01.T01 MTR_5g007410 54.229 402 172 5 16 415 14 405 9.97e-134 392
MsG0580026474.01.T01 MTR_5g045510 55.443 395 145 6 25 417 6 371 1.14e-132 386
MsG0580026474.01.T01 MTR_6g045333 53.071 407 176 7 20 418 47 446 1.40e-132 389
MsG0580026474.01.T01 MTR_5g045170 53.731 402 166 7 23 418 4 391 2.57e-131 384
MsG0580026474.01.T01 MTR_5g039450 51.918 391 149 7 27 415 2 355 2.17e-123 362
MsG0580026474.01.T01 MTR_5g031970 50.750 400 142 7 23 418 8 356 2.32e-116 344
MsG0580026474.01.T01 MTR_5g039470 52.553 333 152 2 50 382 2 328 5.02e-116 342
MsG0580026474.01.T01 MTR_3g071850 50.643 389 178 6 33 414 24 405 7.82e-114 353
MsG0580026474.01.T01 MTR_0009s0080 52.210 362 160 6 29 385 14 367 1.31e-104 317
MsG0580026474.01.T01 MTR_1g066830 43.188 389 211 6 28 415 5 384 2.66e-88 273
MsG0580026474.01.T01 MTR_1g059860 48.077 312 122 4 100 378 7 311 8.49e-86 265
MsG0580026474.01.T01 MTR_5g063950 40.513 390 189 8 32 415 7 359 6.40e-78 246
MsG0580026474.01.T01 MTR_1g108820 41.282 390 208 10 35 417 10 385 1.29e-77 246
MsG0580026474.01.T01 MTR_6g040270 40.153 391 208 7 34 417 9 380 1.20e-76 243
MsG0580026474.01.T01 MTR_7g026500 39.141 396 211 8 33 415 14 392 4.81e-75 239
MsG0580026474.01.T01 MTR_6g022500 40.000 385 217 7 35 417 103 475 1.39e-74 241
MsG0580026474.01.T01 MTR_5g058100 40.458 393 218 10 25 415 3 381 1.55e-74 238
MsG0580026474.01.T01 MTR_5g058000 40.945 381 197 8 40 415 15 372 2.65e-74 237
MsG0580026474.01.T01 MTR_1089s0010 38.802 384 215 6 35 415 10 376 2.56e-72 232
MsG0580026474.01.T01 MTR_1g085120 38.760 387 225 7 32 415 91 468 3.08e-72 234
MsG0580026474.01.T01 MTR_1g085120 38.760 387 225 7 32 415 166 543 1.13e-71 235
MsG0580026474.01.T01 MTR_5g073420 38.918 388 207 11 35 415 13 377 6.17e-69 223
MsG0580026474.01.T01 MTR_7g055943 38.945 398 221 8 26 415 35 418 2.42e-68 223
MsG0580026474.01.T01 MTR_5g065100 36.973 403 193 10 22 418 2 349 1.12e-65 216
MsG0580026474.01.T01 MTR_4g039440 38.677 393 214 13 33 415 34 409 1.85e-63 210
MsG0580026474.01.T01 MTR_6g011460 36.520 408 237 9 13 415 28 418 5.89e-63 209
MsG0580026474.01.T01 MTR_1g108800 39.793 387 174 8 35 417 10 341 6.50e-63 206
MsG0580026474.01.T01 MTR_5g073370 35.128 390 219 11 40 417 12 379 1.06e-54 186
MsG0580026474.01.T01 MTR_6g022360 34.961 389 217 9 35 415 45 405 3.70e-52 180
MsG0580026474.01.T01 MTR_6g044560 33.259 448 231 12 6 415 144 561 8.91e-51 180
MsG0580026474.01.T01 MTR_6g044572 33.494 415 209 10 35 415 4 385 2.88e-50 174
MsG0580026474.01.T01 MTR_5g061410 37.374 297 151 6 33 328 5 267 3.20e-50 171
MsG0580026474.01.T01 MTR_5g073340 34.412 340 172 10 25 354 2 300 5.80e-50 171
MsG0580026474.01.T01 MTR_5g044790 60.927 151 26 2 299 418 292 440 3.76e-49 173
MsG0580026474.01.T01 MTR_1g085120 37.542 301 176 7 32 329 178 469 7.38e-49 172
MsG0580026474.01.T01 MTR_3g071790 51.691 207 91 4 177 379 1 202 1.94e-48 164
MsG0580026474.01.T01 MTR_1g108820 37.874 301 170 7 35 329 10 299 1.97e-48 169
MsG0580026474.01.T01 MTR_6g022520 39.498 319 182 6 99 415 1 310 4.57e-48 167
MsG0580026474.01.T01 MTR_7g098510 34.140 413 232 13 16 415 3 388 6.85e-48 168
MsG0580026474.01.T01 MTR_2g005990 32.048 415 222 16 35 417 8 394 9.93e-44 157
MsG0580026474.01.T01 MTR_1g041245 33.173 416 222 17 22 415 2 383 2.11e-43 156
MsG0580026474.01.T01 MTR_7g007080 32.108 408 227 13 30 417 1 378 2.42e-43 156
MsG0580026474.01.T01 MTR_5g054920 42.105 190 98 2 201 388 1 180 2.56e-43 150
MsG0580026474.01.T01 MTR_7g098570 32.843 408 234 12 19 413 8 388 5.66e-43 157
MsG0580026474.01.T01 MTR_7g033915 33.827 405 215 16 25 418 3 365 6.97e-43 154
MsG0580026474.01.T01 MTR_5g061680 36.508 315 159 10 40 352 18 293 1.02e-42 153
MsG0580026474.01.T01 MTR_7g033990 34.987 383 197 15 22 385 2 351 4.65e-42 153
MsG0580026474.01.T01 MTR_2g007450 31.106 434 250 13 18 418 3 420 7.56e-42 153
MsG0580026474.01.T01 MTR_1g053025 31.785 409 233 13 33 417 2 388 1.25e-41 151
MsG0580026474.01.T01 MTR_3g099830 31.429 420 216 16 22 417 2 373 1.59e-41 151
MsG0580026474.01.T01 MTR_7g032380 32.051 390 197 15 40 415 18 353 3.69e-41 149
MsG0580026474.01.T01 MTR_7g115270 30.170 411 256 10 23 415 2 399 4.81e-41 150
MsG0580026474.01.T01 MTR_7g075820 30.935 417 223 16 35 417 8 393 8.42e-41 149
MsG0580026474.01.T01 MTR_7g098480 33.090 411 231 13 16 412 3 383 1.33e-40 150
MsG0580026474.01.T01 MTR_2g007400 29.512 410 245 10 33 417 12 402 2.30e-40 148
MsG0580026474.01.T01 MTR_0543s0010 33.333 393 223 12 35 418 88 450 3.62e-40 149
MsG0580026474.01.T01 MTR_5g008950 31.362 389 222 14 40 415 6 362 4.18e-40 147
MsG0580026474.01.T01 MTR_7g056433 31.095 402 249 11 25 415 2 386 4.76e-40 147
MsG0580026474.01.T01 MTR_3g105060 31.807 393 228 13 29 415 12 370 1.07e-38 143
MsG0580026474.01.T01 MTR_0492s0020 34.167 360 198 12 35 385 88 417 1.36e-38 144
MsG0580026474.01.T01 MTR_3g107120 30.583 412 237 13 27 415 3 388 1.68e-38 143
MsG0580026474.01.T01 MTR_3g107100 31.566 415 230 17 31 417 9 397 2.20e-38 143
MsG0580026474.01.T01 MTR_3g107160 29.710 414 235 15 27 417 2 382 2.30e-38 142
MsG0580026474.01.T01 MTR_7g056277 31.202 391 239 12 32 415 258 625 7.32e-38 145
MsG0580026474.01.T01 MTR_7g056287 31.414 382 234 11 40 415 10 369 1.62e-37 140
MsG0580026474.01.T01 MTR_7g088260 30.602 415 244 14 18 415 72 459 3.47e-37 141
MsG0580026474.01.T01 MTR_3g082890 30.569 422 241 15 2 394 67 465 1.97e-36 139
MsG0580026474.01.T01 MTR_7g032370 31.298 393 203 17 45 415 2 349 9.33e-36 135
MsG0580026474.01.T01 MTR_5g008920 30.958 407 240 16 20 415 2 378 9.49e-36 135
MsG0580026474.01.T01 MTR_1g107385 29.680 438 254 15 12 417 7 422 2.21e-35 135
MsG0580026474.01.T01 MTR_3g108560 33.498 406 218 15 31 418 18 389 3.42e-35 134
MsG0580026474.01.T01 MTR_5g083890 29.927 411 223 14 35 407 8 391 4.64e-35 136
MsG0580026474.01.T01 MTR_5g024060 53.521 142 61 4 271 410 62 200 8.13e-35 130
MsG0580026474.01.T01 MTR_3g108150 30.637 408 248 10 23 418 3 387 1.71e-34 132
MsG0580026474.01.T01 MTR_4g098590 30.270 370 217 10 40 387 6 356 2.34e-34 131
MsG0580026474.01.T01 MTR_3g095600 32.190 379 161 11 35 409 6 292 3.10e-34 129
MsG0580026474.01.T01 MTR_3g023630 29.676 401 231 14 31 415 6 371 3.19e-33 128
MsG0580026474.01.T01 MTR_7g114710 30.597 402 213 13 29 415 11 361 6.68e-33 127
MsG0580026474.01.T01 MTR_7g034115 31.135 379 217 13 22 385 2 351 3.83e-32 125
MsG0580026474.01.T01 MTR_7g060470 30.585 376 221 11 32 385 2 359 3.90e-32 125
MsG0580026474.01.T01 MTR_3g040700 28.792 389 222 14 7 378 17 367 2.23e-31 124
MsG0580026474.01.T01 MTR_2g008310 28.818 406 227 16 35 417 4 370 3.39e-31 123
MsG0580026474.01.T01 MTR_2g008320 29.298 413 238 15 27 417 46 426 1.04e-30 122
MsG0580026474.01.T01 MTR_3g082890 27.473 455 240 14 14 404 2 430 1.29e-30 122
MsG0580026474.01.T01 MTR_2g007500 30.055 366 194 14 19 360 3 330 1.97e-30 120
MsG0580026474.01.T01 MTR_7g007340 30.709 381 198 16 22 387 2 331 6.24e-30 119
MsG0580026474.01.T01 MTR_7g083740 27.885 416 228 13 19 415 2 364 1.65e-29 118
MsG0580026474.01.T01 MTR_7g034110 30.641 359 170 14 40 385 18 310 5.93e-29 116
MsG0580026474.01.T01 MTR_7g034120 32.000 325 174 13 109 415 10 305 9.51e-29 115
MsG0580026474.01.T01 MTR_3g036250 29.925 401 221 15 33 415 5 363 3.14e-28 114
MsG0580026474.01.T01 MTR_1377s0010 41.985 131 68 1 255 385 5 127 1.06e-27 107
MsG0580026474.01.T01 MTR_3g026920 27.857 420 220 12 40 417 26 404 1.34e-26 110
MsG0580026474.01.T01 MTR_7g022105 26.486 370 252 7 40 403 56 411 2.20e-26 110
MsG0580026474.01.T01 MTR_2g007360 28.337 427 219 18 23 417 2 373 2.83e-26 109
MsG0580026474.01.T01 MTR_5g012840 29.532 342 159 13 58 385 14 287 4.98e-26 107
MsG0580026474.01.T01 MTR_5g033200 41.279 172 89 4 242 410 12 174 5.05e-26 103
MsG0580026474.01.T01 MTR_3g095630 38.202 178 97 5 242 416 17 184 1.03e-25 103
MsG0580026474.01.T01 MTR_7g056430 29.363 361 206 13 35 385 11 332 1.53e-25 110
MsG0580026474.01.T01 MTR_7g056020 29.367 395 210 14 31 404 14 360 1.60e-25 109
MsG0580026474.01.T01 MTR_7g056420 29.363 361 206 13 35 385 11 332 2.15e-25 109
MsG0580026474.01.T01 MTR_3g109982 33.443 305 179 9 114 410 180 468 9.27e-25 107
MsG0580026474.01.T01 MTR_3g109982 38.378 185 101 6 35 216 15 189 6.39e-15 77.4
MsG0580026474.01.T01 MTR_7g021990 25.806 372 252 7 40 403 55 410 1.43e-24 105
MsG0580026474.01.T01 MTR_5g084070 29.412 425 231 19 35 410 15 419 1.66e-24 105
MsG0580026474.01.T01 MTR_7g021950 25.806 372 252 7 40 403 55 410 3.83e-24 104
MsG0580026474.01.T01 MTR_5g013500 28.612 353 207 12 78 415 40 362 4.54e-24 102
MsG0580026474.01.T01 MTR_7g056447 38.095 189 108 4 33 219 9 190 7.51e-24 100
MsG0580026474.01.T01 MTR_8g077460 26.781 407 246 12 25 415 2 372 5.76e-23 100
MsG0580026474.01.T01 MTR_7g007370 30.184 381 184 13 19 384 3 316 3.65e-22 97.1
MsG0580026474.01.T01 MTR_4g032730 27.074 458 249 18 35 416 17 465 4.41e-22 98.6
MsG0580026474.01.T01 MTR_3g087260 35.556 270 140 8 162 418 209 457 4.86e-22 98.2
MsG0580026474.01.T01 MTR_8g058965 26.411 443 252 16 40 416 20 454 1.20e-21 97.1
MsG0580026474.01.T01 MTR_8g469020 29.241 448 234 23 40 416 14 449 1.23e-21 97.1
MsG0580026474.01.T01 MTR_5g076150 35.484 217 123 7 147 350 15 227 1.29e-21 93.6
MsG0580026474.01.T01 MTR_8g085430 35.751 193 96 8 40 216 18 198 3.92e-21 94.0
MsG0580026474.01.T01 MTR_8g085430 41.463 82 40 1 312 385 215 296 4.54e-11 64.3
MsG0580026474.01.T01 MTR_3g108560 33.438 317 161 14 31 331 18 300 9.45e-21 92.8
MsG0580026474.01.T01 MTR_5g024050 51.000 100 45 1 177 276 1 96 1.43e-20 86.7
MsG0580026474.01.T01 MTR_4g080773 24.942 429 252 13 26 388 13 437 4.61e-20 92.4
MsG0580026474.01.T01 MTR_4g080773 24.942 429 252 13 26 388 13 437 5.46e-20 92.4
MsG0580026474.01.T01 MTR_5g058350 35.450 189 91 4 26 214 3 160 6.52e-20 87.0
MsG0580026474.01.T01 MTR_8g062080 24.832 447 277 15 18 416 8 443 1.68e-19 90.5
MsG0580026474.01.T01 MTR_5g080710 26.714 423 252 17 35 410 35 446 3.11e-19 89.7
MsG0580026474.01.T01 MTR_8g014260 26.535 456 265 17 20 415 3 448 4.71e-19 89.4
MsG0580026474.01.T01 MTR_2g083840 26.271 472 268 21 8 416 1 455 4.76e-19 89.4
MsG0580026474.01.T01 MTR_4g056020 25.412 425 220 19 32 382 8 409 7.82e-19 88.6
MsG0580026474.01.T01 MTR_6g083130 43.089 123 56 3 111 232 213 322 8.68e-19 87.0
MsG0580026474.01.T01 MTR_8g468810 27.273 473 259 19 15 416 3 461 9.31e-19 88.6
MsG0580026474.01.T01 MTR_4g134150 36.364 176 99 6 46 218 23 188 1.34e-18 84.7
MsG0580026474.01.T01 MTR_4g080610 26.098 387 223 11 31 405 10 345 1.87e-18 86.7
MsG0580026474.01.T01 MTR_6g029350 34.857 175 90 7 250 417 40 197 2.32e-18 84.3
MsG0580026474.01.T01 MTR_2g007550 27.007 411 208 13 20 417 3 334 2.73e-18 85.9
MsG0580026474.01.T01 MTR_3g095640 34.545 165 101 5 16 174 2 165 4.88e-18 81.6
MsG0580026474.01.T01 MTR_6g022390 36.434 129 73 4 35 156 7 133 2.42e-17 79.0
MsG0580026474.01.T01 MTR_7g033945 35.393 178 96 6 25 192 3 171 4.80e-17 79.0
MsG0580026474.01.T01 MTR_8g070950 26.915 457 249 20 16 416 5 432 1.06e-16 82.0
MsG0580026474.01.T01 MTR_8g445780 24.433 397 237 14 25 370 5 389 1.98e-16 80.9
MsG0580026474.01.T01 MTR_8g467800 25.431 464 267 20 17 416 3 451 3.48e-16 80.5
MsG0580026474.01.T01 MTR_8g014160 24.700 417 255 12 28 415 36 422 4.02e-16 80.1
MsG0580026474.01.T01 MTR_3g467400 30.709 254 145 9 35 269 5 246 5.01e-16 79.3
MsG0580026474.01.T01 MTR_2g007090 29.876 241 131 8 180 415 84 291 5.25e-16 78.6
MsG0580026474.01.T01 MTR_4g056030 23.888 427 233 16 31 386 7 412 3.76e-15 77.4
MsG0580026474.01.T01 MTR_7g081290 35.878 131 74 4 282 404 117 245 6.92e-15 74.7
MsG0580026474.01.T01 MTR_5g092960 24.503 453 256 17 35 415 21 459 8.73e-15 76.3
MsG0580026474.01.T01 MTR_3g106960 30.726 179 95 8 249 418 40 198 1.10e-14 73.6
MsG0580026474.01.T01 MTR_3g110010 37.297 185 103 5 35 216 15 189 1.42e-14 76.3
MsG0580026474.01.T01 MTR_3g107940 32.258 186 106 5 211 384 11 188 1.74e-14 74.7
MsG0580026474.01.T01 MTR_5g045700 67.391 46 15 0 34 79 14 59 1.78e-14 68.2
MsG0580026474.01.T01 MTR_3g114200 34.568 162 89 6 14 169 2 152 4.37e-14 70.1
MsG0580026474.01.T01 MTR_5g073400 39.844 128 64 4 109 234 7 123 5.23e-14 69.3
MsG0580026474.01.T01 MTR_3g115430 32.258 124 73 5 295 415 7 122 7.26e-14 68.6
MsG0580026474.01.T01 MTR_4g093690 29.534 193 114 9 33 214 18 199 7.52e-14 72.0
MsG0580026474.01.T01 MTR_0571s0010 42.500 80 45 1 35 114 34 112 9.85e-14 67.8
MsG0580026474.01.T01 MTR_1g038710 25.057 435 230 19 28 386 14 428 1.20e-13 72.8
MsG0580026474.01.T01 MTR_7g075800 24.121 398 228 17 40 383 16 393 1.47e-13 73.2
MsG0580026474.01.T01 MTR_7g034090 34.483 145 79 6 280 416 174 310 4.10e-13 70.9
MsG0580026474.01.T01 MTR_6g033095 46.667 75 40 0 311 385 110 184 7.88e-13 67.4
MsG0580026474.01.T01 MTR_2g007610 36.765 136 66 5 290 417 27 150 1.90e-12 65.9
MsG0580026474.01.T01 MTR_8g468840 24.879 414 239 14 35 385 16 420 1.96e-12 68.9
MsG0580026474.01.T01 MTR_7g094030 29.167 192 123 4 10 196 2 185 2.12e-12 68.9
MsG0580026474.01.T01 MTR_8g468810 31.651 218 128 9 15 216 3 215 2.87e-12 67.8
MsG0580026474.01.T01 MTR_8g468810 31.507 219 127 9 15 216 3 215 3.01e-12 67.8
MsG0580026474.01.T01 MTR_2g020180 37.143 105 55 2 285 385 88 185 3.48e-12 65.9
MsG0580026474.01.T01 MTR_8g468810 31.651 218 128 9 15 216 3 215 3.82e-12 67.8
MsG0580026474.01.T01 MTR_2g072530 26.036 169 107 5 23 186 3 158 3.88e-12 68.2
MsG0580026474.01.T01 MTR_8g468810 31.651 218 128 9 15 216 3 215 5.29e-12 67.4
MsG0580026474.01.T01 MTR_7g056280 30.052 193 109 7 206 385 367 546 6.68e-12 67.8
MsG0580026474.01.T01 MTR_6g022410 45.455 77 42 0 339 415 28 104 1.74e-11 61.2
MsG0580026474.01.T01 MTR_2g082800 30.935 139 86 4 19 155 13 143 2.93e-11 65.1
MsG0580026474.01.T01 MTR_5g024040 64.103 39 14 0 34 72 23 61 5.50e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580026474.01.T01 AT4G26340 28.733 442 229 17 33 415 2 416 1.55e-29 119
MsG0580026474.01.T01 AT5G56420 26.897 435 247 17 32 415 5 419 1.37e-25 108
MsG0580026474.01.T01 AT5G56420 26.897 435 247 17 32 415 5 419 1.37e-25 108
MsG0580026474.01.T01 AT5G56420 26.897 435 247 17 32 415 5 419 1.37e-25 108
MsG0580026474.01.T01 AT4G00160 29.353 402 230 14 28 384 11 403 1.68e-25 108
MsG0580026474.01.T01 AT1G78750 25.316 474 267 19 15 418 2 458 1.14e-24 105
MsG0580026474.01.T01 AT1G78750 25.316 474 267 19 15 418 2 458 1.14e-24 105
MsG0580026474.01.T01 AT5G62970 27.033 455 248 17 33 414 2 445 1.09e-22 100
MsG0580026474.01.T01 AT5G38590 28.141 398 227 13 33 386 2 384 4.93e-22 97.8
MsG0580026474.01.T01 AT3G50710 25.397 441 253 15 33 415 2 424 3.32e-21 95.5
MsG0580026474.01.T01 AT3G59190 26.147 436 217 21 33 386 12 424 3.42e-21 96.3
MsG0580026474.01.T01 AT1G51370 24.561 456 267 17 17 418 3 435 3.90e-21 95.5
MsG0580026474.01.T01 AT4G10400 29.833 419 244 17 33 415 2 406 5.88e-21 94.7
MsG0580026474.01.T01 AT4G10400 29.833 419 244 17 33 415 2 406 5.88e-21 94.7
MsG0580026474.01.T01 AT4G10400 29.833 419 244 17 33 415 2 406 5.88e-21 94.7
MsG0580026474.01.T01 AT5G22610 24.057 424 273 12 35 417 20 435 9.45e-21 94.4
MsG0580026474.01.T01 AT4G14103 27.989 368 186 12 33 334 8 362 1.08e-20 93.6
MsG0580026474.01.T01 AT4G14103 27.989 368 186 12 33 334 8 362 1.08e-20 93.6
MsG0580026474.01.T01 AT3G59190 28.108 370 174 18 33 324 12 367 1.37e-20 93.2
MsG0580026474.01.T01 AT3G59160 28.640 419 193 19 8 337 1 402 2.01e-20 93.6
MsG0580026474.01.T01 AT4G14103 28.022 364 183 12 33 330 8 358 3.21e-20 92.8
MsG0580026474.01.T01 AT5G56820 27.146 431 246 15 32 415 14 423 3.61e-19 89.7
MsG0580026474.01.T01 AT3G51530 24.249 433 255 15 8 385 1 415 3.64e-19 89.7
MsG0580026474.01.T01 AT1G66290 23.941 472 269 16 15 418 4 453 3.84e-19 89.7
MsG0580026474.01.T01 AT3G44060 24.651 430 261 14 40 417 6 424 5.27e-19 89.0
MsG0580026474.01.T01 AT3G59200 31.841 201 122 5 30 221 4 198 6.63e-19 88.2
MsG0580026474.01.T01 AT4G26350 24.598 435 251 17 40 415 9 425 1.22e-18 87.8
MsG0580026474.01.T01 AT3G59200 32.020 203 119 6 30 221 4 198 1.38e-18 88.2
MsG0580026474.01.T01 AT1G66310 24.017 458 277 14 15 418 2 442 1.33e-17 84.7
MsG0580026474.01.T01 AT5G56370 26.884 398 225 14 33 384 2 379 1.38e-17 84.7
MsG0580026474.01.T01 AT5G56370 26.884 398 225 14 33 384 2 379 1.38e-17 84.7
MsG0580026474.01.T01 AT3G42770 24.832 447 251 17 35 418 1 425 1.54e-17 85.1
MsG0580026474.01.T01 AT1G51370 25.641 390 214 16 17 352 3 370 1.83e-17 84.3
MsG0580026474.01.T01 AT5G41830 30.918 207 111 6 33 217 13 209 9.16e-17 82.8
MsG0580026474.01.T01 AT2G04230 26.585 410 242 16 26 384 6 407 2.67e-16 80.9
MsG0580026474.01.T01 AT4G22280 26.239 343 192 10 33 327 2 331 3.83e-16 79.3
MsG0580026474.01.T01 AT5G56690 24.939 409 238 15 35 386 4 400 4.33e-16 80.1
MsG0580026474.01.T01 AT4G22280 26.239 343 192 10 33 327 2 331 4.43e-16 80.1
MsG0580026474.01.T01 AT5G53840 21.525 446 281 15 25 417 10 439 7.20e-16 79.7
MsG0580026474.01.T01 AT2G26860 25.122 410 219 15 33 377 2 388 7.34e-16 79.3
MsG0580026474.01.T01 AT2G26860 25.122 410 219 15 33 377 2 388 7.34e-16 79.3
MsG0580026474.01.T01 AT4G27050 23.941 472 257 18 30 418 1 453 2.87e-15 77.8
MsG0580026474.01.T01 AT4G27050 23.941 472 257 18 30 418 1 453 2.87e-15 77.8
MsG0580026474.01.T01 AT4G27050 23.941 472 257 18 30 418 1 453 2.87e-15 77.8
MsG0580026474.01.T01 AT4G27050 23.941 472 257 18 30 418 1 453 2.87e-15 77.8
MsG0580026474.01.T01 AT4G27050 23.941 472 257 18 30 418 1 453 2.87e-15 77.8
MsG0580026474.01.T01 AT5G56560 26.056 426 253 19 35 415 7 415 3.25e-15 77.4
MsG0580026474.01.T01 AT3G62440 23.605 466 265 16 33 418 2 456 3.52e-15 77.4
MsG0580026474.01.T01 AT4G00320 30.435 207 112 6 33 217 13 209 3.53e-15 77.8
MsG0580026474.01.T01 AT1G51370 27.723 202 133 4 17 217 3 192 3.71e-15 76.6
MsG0580026474.01.T01 AT5G53640 27.488 211 132 7 18 220 3 200 5.24e-15 74.3
MsG0580026474.01.T01 AT1G58310 26.598 391 186 19 33 335 8 385 7.40e-15 76.6
MsG0580026474.01.T01 AT1G66320 22.323 439 269 14 37 418 34 457 8.60e-15 76.3
MsG0580026474.01.T01 AT3G59210 26.685 371 194 14 33 335 7 367 2.76e-14 75.1
MsG0580026474.01.T01 AT3G59210 26.685 371 194 14 33 335 7 367 2.76e-14 75.1
MsG0580026474.01.T01 AT3G59210 26.685 371 194 14 33 335 7 367 2.76e-14 75.1
MsG0580026474.01.T01 AT3G59210 26.685 371 194 14 33 335 7 367 2.76e-14 75.1
MsG0580026474.01.T01 AT3G59210 26.685 371 194 14 33 335 7 367 2.76e-14 75.1
MsG0580026474.01.T01 AT5G41840 29.665 209 118 7 30 217 11 211 4.01e-14 74.7
MsG0580026474.01.T01 AT3G58900 27.211 441 220 23 40 398 9 430 4.62e-14 74.3
MsG0580026474.01.T01 AT3G52690 32.035 231 120 10 187 381 27 256 6.14e-14 72.4
MsG0580026474.01.T01 AT3G58880 31.795 195 115 5 33 216 3 190 1.36e-13 72.8
MsG0580026474.01.T01 AT3G44810 24.026 462 265 17 28 418 2 448 1.59e-13 72.4
MsG0580026474.01.T01 AT5G22730 28.972 214 131 8 13 219 11 210 2.39e-13 72.0
MsG0580026474.01.T01 AT5G22730 28.972 214 131 8 13 219 11 210 2.39e-13 72.0
MsG0580026474.01.T01 AT5G38590 32.086 187 116 6 33 216 2 180 2.41e-13 70.5
MsG0580026474.01.T01 AT5G22730 28.972 214 131 8 13 219 11 210 2.63e-13 71.6
MsG0580026474.01.T01 AT3G59170 30.876 217 121 6 29 217 3 218 2.94e-13 71.6
MsG0580026474.01.T01 AT3G54910 27.042 355 206 15 102 415 28 370 5.79e-13 70.5
MsG0580026474.01.T01 AT3G54910 27.042 355 206 15 102 415 28 370 5.79e-13 70.5
MsG0580026474.01.T01 AT3G54910 27.042 355 206 15 102 415 28 370 5.79e-13 70.5
MsG0580026474.01.T01 AT3G59240 25.000 364 202 12 33 335 8 361 7.54e-13 70.5
MsG0580026474.01.T01 AT4G14096 30.570 193 117 6 33 217 8 191 8.19e-13 70.5
MsG0580026474.01.T01 AT4G14096 30.570 193 117 6 33 217 8 191 8.19e-13 70.5
MsG0580026474.01.T01 AT3G58940 25.978 358 197 15 33 335 2 346 9.73e-13 70.5
MsG0580026474.01.T01 AT3G58940 25.978 358 197 15 33 335 2 346 9.73e-13 70.5
MsG0580026474.01.T01 AT4G10420 28.483 323 186 13 133 415 2 319 1.23e-12 68.9
MsG0580026474.01.T01 AT4G09920 31.282 195 121 5 33 222 2 188 1.34e-12 68.6
MsG0580026474.01.T01 AT4G09920 31.282 195 121 5 33 222 2 188 1.34e-12 68.6
MsG0580026474.01.T01 AT4G13965 25.173 433 262 16 28 415 5 420 1.58e-12 69.3
MsG0580026474.01.T01 AT5G38390 26.087 391 200 15 41 361 10 381 1.60e-12 69.3
MsG0580026474.01.T01 AT5G41630 29.524 210 112 10 33 219 12 208 2.08e-12 68.9
MsG0580026474.01.T01 AT5G22670 27.551 196 127 5 25 216 3 187 2.32e-12 68.9
MsG0580026474.01.T01 AT4G09920 31.282 195 121 5 33 222 2 188 2.55e-12 67.4
MsG0580026474.01.T01 AT4G09920 31.282 195 121 5 33 222 2 188 2.55e-12 67.4
MsG0580026474.01.T01 AT4G09920 31.282 195 121 5 33 222 2 188 2.55e-12 67.4
MsG0580026474.01.T01 AT3G58960 29.282 181 123 3 35 213 4 181 2.98e-12 68.6
MsG0580026474.01.T01 AT1G69630 28.365 208 132 7 15 216 2 198 4.86e-12 67.8
MsG0580026474.01.T01 AT4G13960 25.000 400 210 17 35 361 4 386 6.97e-12 67.4
MsG0580026474.01.T01 AT4G13960 25.000 400 210 17 35 361 4 386 6.97e-12 67.4
MsG0580026474.01.T01 AT5G53635 30.688 189 113 7 35 216 2 179 9.17e-12 67.0
MsG0580026474.01.T01 AT5G56370 26.946 334 190 12 33 329 2 318 1.77e-11 65.5
MsG0580026474.01.T01 AT3G58980 25.620 363 189 13 33 326 2 352 1.86e-11 66.2
MsG0580026474.01.T01 AT1G64540 32.258 186 104 8 35 216 7 174 2.21e-11 65.9
MsG0580026474.01.T01 AT1G64540 32.258 186 104 8 35 216 7 174 2.21e-11 65.9
MsG0580026474.01.T01 AT5G22610 26.000 200 131 5 35 225 20 211 4.04e-11 65.1
MsG0580026474.01.T01 AT1G06630 27.442 215 134 6 10 216 2 202 5.67e-11 63.9
MsG0580026474.01.T01 AT1G06630 27.442 215 134 6 10 216 2 202 5.67e-11 63.9
MsG0580026474.01.T01 AT1G06630 27.442 215 134 6 10 216 2 202 5.95e-11 63.5
MsG0580026474.01.T01 AT1G06630 28.182 220 135 7 5 216 7 211 6.01e-11 64.3
MsG0580026474.01.T01 AT1G06630 27.442 215 134 6 10 216 2 202 6.62e-11 64.3
MsG0580026474.01.T01 AT1G06630 27.442 215 134 6 10 216 2 202 6.62e-11 64.3
MsG0580026474.01.T01 AT1G06630 27.442 215 134 6 10 216 2 202 6.62e-11 64.3
MsG0580026474.01.T01 AT1G06630 27.442 215 134 6 10 216 2 202 6.62e-11 64.3
MsG0580026474.01.T01 AT1G06630 24.474 380 204 13 10 331 2 356 8.14e-11 64.3

Find 97 sgRNAs with CRISPR-Local

Find 125 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATTTCATGAAACTCCTTTC+TGG 0.155629 5:-38135093 MsG0580026474.01.T01:CDS
AGGATAAATCTTCTATAAAA+TGG 0.200029 5:+38134096 None:intergenic
GTAATTAAATATTCCAATTT+CGG 0.203461 5:+38135066 None:intergenic
TAATTAAATATTCCAATTTC+GGG 0.215109 5:+38135067 None:intergenic
CCTTTCTGGATGCCCGAAAT+TGG 0.226420 5:-38135079 MsG0580026474.01.T01:CDS
TCAAGCTCTTAAAATTAAAA+AGG 0.228674 5:-38134420 MsG0580026474.01.T01:intron
GTCCAGGCTCTAGAAGTAAT+TGG 0.262686 5:-38134907 MsG0580026474.01.T01:CDS
TGTCGATATCGGAGAGTAAA+TGG 0.290046 5:+38135490 None:intergenic
AACACTTGTGGTTCTGAGTT+TGG 0.320278 5:-38135211 MsG0580026474.01.T01:CDS
TCAAGTGTTGTTCCAGCCTC+TGG 0.328343 5:-38135356 MsG0580026474.01.T01:CDS
GTTTCAACTATTGAAGAAAA+TGG 0.330258 5:-38135024 MsG0580026474.01.T01:CDS
AAGTGTTCTGCAGCAGAAAA+TGG 0.331554 5:+38135227 None:intergenic
TTTCAATTCTGCATGTTGTT+AGG 0.331958 5:+38134234 None:intergenic
TTTCAGTTCGTTTCCAAGAT+AGG 0.333282 5:-38135119 MsG0580026474.01.T01:CDS
TAACCCACCTTCTACTATAC+TGG 0.348774 5:-38134502 MsG0580026474.01.T01:CDS
AGGCTAGACGTGACACATTC+AGG 0.364333 5:+38134254 None:intergenic
TCCAGGCTCTAGAAGTAATT+GGG 0.374481 5:-38134906 MsG0580026474.01.T01:CDS
TCATGAAATCCACCCTATCT+TGG 0.378865 5:+38135106 None:intergenic
ATACTTGTTTGAAAATCCTT+TGG 0.378906 5:-38135256 MsG0580026474.01.T01:CDS
TTACACGTGGGAGAGATCTT+AGG 0.380546 5:+38134068 None:intergenic
GATATCGACATCGATGATAA+AGG 0.381436 5:-38135477 MsG0580026474.01.T01:CDS
TTTATCATCGATGTCGATAT+CGG 0.385989 5:+38135479 None:intergenic
GGATAAATCTTCTATAAAAT+GGG 0.386747 5:+38134097 None:intergenic
ATTGTTTCAGTATCGACAAA+TGG 0.399845 5:-38135320 MsG0580026474.01.T01:CDS
CTTGAGTTTAAAAGATTTGA+GGG 0.419423 5:+38135374 None:intergenic
GTATGTTGCAAATCGAAAAT+CGG 0.428783 5:+38134193 None:intergenic
GTTCTGAAGGCATCTTTGAT+TGG 0.435134 5:+38135546 None:intergenic
CGGAGAGTAAATGGCACAAC+GGG 0.435757 5:+38135499 None:intergenic
TTCAGTTCGTTTCCAAGATA+GGG 0.446813 5:-38135118 MsG0580026474.01.T01:CDS
AACAGAACAATCAAACATAT+CGG 0.450018 5:+38135173 None:intergenic
AACCTCGAATAAACAGATAC+TGG 0.453907 5:+38134951 None:intergenic
GGACTCGATACATTCATAGT+TGG 0.466227 5:-38134481 MsG0580026474.01.T01:CDS
ATCGTCGTGGAAATCATTAA+TGG 0.470662 5:+38135596 None:intergenic
ATTCATCAACCAACGCGGAT+TGG 0.474093 5:-38134295 MsG0580026474.01.T01:CDS
AGCCTTAGCATCCCAGAGGC+TGG 0.476869 5:+38135344 None:intergenic
GGCCAGTATCTGTTTATTCG+AGG 0.479748 5:-38134953 MsG0580026474.01.T01:CDS
GACTCGATACATTCATAGTT+GGG 0.481470 5:-38134480 MsG0580026474.01.T01:CDS
GAAAACGTCGCCATCGCAAT+CGG 0.485323 5:-38135637 MsG0580026474.01.T01:CDS
TTGTTTCAGTATCGACAAAT+GGG 0.485589 5:-38135319 MsG0580026474.01.T01:CDS
TTCCAGCCTCTGGGATGCTA+AGG 0.490452 5:-38135346 MsG0580026474.01.T01:CDS
AACGCAAGTAAAACAGATAG+TGG 0.490820 5:-38135669 MsG0580026474.01.T01:CDS
ACTTGAGTTTAAAAGATTTG+AGG 0.491101 5:+38135373 None:intergenic
ATCGAGTCCAGTATAGTAGA+AGG 0.492805 5:+38134495 None:intergenic
ACATTATAGAGTGCTCTTAA+CGG 0.493138 5:+38134928 None:intergenic
CCAATTTCGGGCATCCAGAA+AGG 0.502075 5:+38135079 None:intergenic
TGGCCTCGACCAACTTAGAC+AGG 0.505533 5:+38134971 None:intergenic
GAGCCATCTCTGCGAGAGAA+TGG 0.507160 5:+38135521 None:intergenic
CCACCATTCTCTCGCAGAGA+TGG 0.508126 5:-38135524 MsG0580026474.01.T01:CDS
CAGAAAATGGTAGGTGCCAA+AGG 0.513040 5:+38135240 None:intergenic
TTTCTGCTGCAGAACACTTG+TGG 0.514448 5:-38135223 MsG0580026474.01.T01:CDS
CATTAAAACCCTGTCTAAGT+TGG 0.518229 5:-38134980 MsG0580026474.01.T01:CDS
ACTCTTGACCTGAAACCAAA+GGG 0.519936 5:-38134125 MsG0580026474.01.T01:CDS
TGCAAATCGAAAATCGGCTT+CGG 0.520244 5:+38134199 None:intergenic
TCTTCAATAGTTGAAACGCT+TGG 0.524752 5:+38135030 None:intergenic
CGAGAGAATGGTGGTTCTGA+AGG 0.527213 5:+38135533 None:intergenic
CCCCAATTACTTCTAGAGCC+TGG 0.532483 5:+38134905 None:intergenic
CAAGTGTTGTTCCAGCCTCT+GGG 0.538847 5:-38135355 MsG0580026474.01.T01:CDS
AAGAGCACTCTATAATGTCC+AGG 0.554645 5:-38134923 MsG0580026474.01.T01:CDS
AACGAACTGAAATCAGATGT+AGG 0.555699 5:+38135130 None:intergenic
GTCGCCATCGCAATCGGCGA+CGG 0.557210 5:-38135631 MsG0580026474.01.T01:CDS
CAGGTCAAGAGTACAGAGAA+TGG 0.558747 5:+38134136 None:intergenic
TGGATATTTCCAATCCGCGT+TGG 0.562849 5:+38134286 None:intergenic
GATTCAGTTCCGTCATATGT+TGG 0.564551 5:-38135433 MsG0580026474.01.T01:CDS
AGGGTACAGTCCTGAGAGCG+TGG 0.566071 5:+38135393 None:intergenic
GAAATCAATTCATATTGCAA+AGG 0.569035 5:-38134545 MsG0580026474.01.T01:CDS
ACGAACTGAAATCAGATGTA+GGG 0.569284 5:+38135131 None:intergenic
AATGGCGGTGTTCCAGCGAA+AGG 0.580424 5:-38135006 MsG0580026474.01.T01:CDS
AACCCTGTCTAAGTTGGTCG+AGG 0.580745 5:-38134974 MsG0580026474.01.T01:CDS
GGGAGAGATCTTAGGAGAGG+AGG 0.584659 5:+38134076 None:intergenic
AGTTCGTTTCCAAGATAGGG+TGG 0.586025 5:-38135115 MsG0580026474.01.T01:CDS
GATAAATCTTCTATAAAATG+GGG 0.586517 5:+38134098 None:intergenic
TACTCTTGACCTGAAACCAA+AGG 0.603343 5:-38134126 MsG0580026474.01.T01:CDS
TCTACCGTCGCCGATTGCGA+TGG 0.604455 5:+38135627 None:intergenic
ATGGCGGTGTTCCAGCGAAA+GGG 0.606542 5:-38135005 MsG0580026474.01.T01:CDS
GAGTCCAGTATAGTAGAAGG+TGG 0.608849 5:+38134498 None:intergenic
TAACTGCGTCCAACATATGA+CGG 0.613263 5:+38135424 None:intergenic
GGGTACAGTCCTGAGAGCGT+GGG 0.622758 5:+38135394 None:intergenic
GTTCTGCAGCAGAAAATGGT+AGG 0.628349 5:+38135231 None:intergenic
GAGTTTGGCAGATATTCATG+TGG 0.635094 5:-38135196 MsG0580026474.01.T01:CDS
GGTACAGTCCTGAGAGCGTG+GGG 0.639434 5:+38135395 None:intergenic
CCAGGCTCTAGAAGTAATTG+GGG 0.642767 5:-38134905 MsG0580026474.01.T01:intron
TATCACTTTCAGCTTACACG+TGG 0.643188 5:+38134055 None:intergenic
ACACATTCAGGAACATGACA+TGG 0.645758 5:+38134266 None:intergenic
CGTGGGAGAGATCTTAGGAG+AGG 0.654016 5:+38134073 None:intergenic
CCATCTCTGCGAGAGAATGG+TGG 0.654788 5:+38135524 None:intergenic
ATAAATCTTCTATAAAATGG+GGG 0.660583 5:+38134099 None:intergenic
ATACATTCATAGTTGGGACG+AGG 0.663042 5:-38134474 MsG0580026474.01.T01:CDS
TCAACTATTGAAGAAAATGG+CGG 0.665379 5:-38135021 MsG0580026474.01.T01:CDS
GGCCTCGACCAACTTAGACA+GGG 0.666475 5:+38134972 None:intergenic
AGTCCAGTATAGTAGAAGGT+GGG 0.668110 5:+38134499 None:intergenic
ATCACTTTCAGCTTACACGT+GGG 0.690557 5:+38134056 None:intergenic
TCGGAGAGTAAATGGCACAA+CGG 0.691356 5:+38135498 None:intergenic
CTCTTGACCTGAAACCAAAG+GGG 0.694964 5:-38134124 MsG0580026474.01.T01:CDS
TGTGAGTTAGTATATCGTCG+TGG 0.728733 5:+38135583 None:intergenic
GAAGAATTCATCAACCAACG+CGG 0.765876 5:-38134300 MsG0580026474.01.T01:CDS
AATCAGCCTTAGCATCCCAG+AGG 0.766989 5:+38135340 None:intergenic
ATAGATCGAGATACTCAATG+CGG 0.819999 5:+38135277 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTATAAAAACAAACTAAA+TGG + Chr5:38135142-38135161 None:intergenic 10.0%
!!! GTTTGTTTTTATAATTTTTA+TGG - Chr5:38135146-38135165 MsG0580026474.01.T01:CDS 10.0%
!!! TAATTCAATTTAATTGATTT+AGG - Chr5:38134975-38134994 MsG0580026474.01.T01:CDS 10.0%
!! AATTAAATTGAATTAGAATG+AGG + Chr5:38134970-38134989 None:intergenic 15.0%
!! ACTATAAATGAGAAAAAAAT+AGG + Chr5:38135427-38135446 None:intergenic 15.0%
!! GTAATTAAATATTCCAATTT+CGG + Chr5:38134685-38134704 None:intergenic 15.0%
!! TAATTAAATATTCCAATTTC+GGG + Chr5:38134684-38134703 None:intergenic 15.0%
!!! TATAATATTGATGATAAATG+AGG + Chr5:38134885-38134904 None:intergenic 15.0%
!! AGGATAAATCTTCTATAAAA+TGG + Chr5:38135655-38135674 None:intergenic 20.0%
!! ATAAATCTTCTATAAAATGG+GGG + Chr5:38135652-38135671 None:intergenic 20.0%
!! GATAAATCTTCTATAAAATG+GGG + Chr5:38135653-38135672 None:intergenic 20.0%
!! GGATAAATCTTCTATAAAAT+GGG + Chr5:38135654-38135673 None:intergenic 20.0%
!! TCAAGCTCTTAAAATTAAAA+AGG - Chr5:38135328-38135347 MsG0580026474.01.T01:CDS 20.0%
!! TTCTAATCATTGAAATCATA+AGG - Chr5:38134929-38134948 MsG0580026474.01.T01:CDS 20.0%
!!! GACAAATCGTTATAATTTTA+AGG - Chr5:38135087-38135106 MsG0580026474.01.T01:CDS 20.0%
!!! TTAGTCAACTTTTTAGATTT+AGG + Chr5:38135021-38135040 None:intergenic 20.0%
! AACAGAACAATCAAACATAT+CGG + Chr5:38134578-38134597 None:intergenic 25.0%
! ACTTGAGTTTAAAAGATTTG+AGG + Chr5:38134378-38134397 None:intergenic 25.0%
! ATACTTGTTTGAAAATCCTT+TGG - Chr5:38134492-38134511 MsG0580026474.01.T01:CDS 25.0%
! CTTGAGTTTAAAAGATTTGA+GGG + Chr5:38134377-38134396 None:intergenic 25.0%
! GAAATCAATTCATATTGCAA+AGG - Chr5:38135203-38135222 MsG0580026474.01.T01:CDS 25.0%
! GCTCTTAAAATTAAAAAGGT+TGG - Chr5:38135332-38135351 MsG0580026474.01.T01:CDS 25.0%
! GTTTCAACTATTGAAGAAAA+TGG - Chr5:38134724-38134743 MsG0580026474.01.T01:intron 25.0%
!!! AATTTTAAGAGCTTGAAGTT+TGG + Chr5:38135324-38135343 None:intergenic 25.0%
!!! ATTTTAAGAGCTTGAAGTTT+GGG + Chr5:38135323-38135342 None:intergenic 25.0%
GTATGTTGCAAATCGAAAAT+CGG + Chr5:38135558-38135577 None:intergenic 30.0%
TCAACTATTGAAGAAAATGG+CGG - Chr5:38134727-38134746 MsG0580026474.01.T01:intron 30.0%
TTTATCATCGATGTCGATAT+CGG + Chr5:38134272-38134291 None:intergenic 30.0%
TTTCAATTCTGCATGTTGTT+AGG + Chr5:38135517-38135536 None:intergenic 30.0%
! ACATTATAGAGTGCTCTTAA+CGG + Chr5:38134823-38134842 None:intergenic 30.0%
! TAAAGGCATAAAAAATGCAG+AGG - Chr5:38134288-38134307 MsG0580026474.01.T01:CDS 30.0%
! TGGGTTAAGTTTTCAAACAT+CGG + Chr5:38135233-38135252 None:intergenic 30.0%
! TGTTTTACTTGCGTTTTTCA+TGG + Chr5:38134074-38134093 None:intergenic 30.0%
!! ATTGTTTCAGTATCGACAAA+TGG - Chr5:38134428-38134447 MsG0580026474.01.T01:CDS 30.0%
!! TTGTTTCAGTATCGACAAAT+GGG - Chr5:38134429-38134448 MsG0580026474.01.T01:CDS 30.0%
AACCTCGAATAAACAGATAC+TGG + Chr5:38134800-38134819 None:intergenic 35.0%
AACGAACTGAAATCAGATGT+AGG + Chr5:38134621-38134640 None:intergenic 35.0%
AACGCAAGTAAAACAGATAG+TGG - Chr5:38134079-38134098 MsG0580026474.01.T01:CDS 35.0%
ACGAACTGAAATCAGATGTA+GGG + Chr5:38134620-38134639 None:intergenic 35.0%
ATAGATCGAGATACTCAATG+CGG + Chr5:38134474-38134493 None:intergenic 35.0%
ATCGTCGTGGAAATCATTAA+TGG + Chr5:38134155-38134174 None:intergenic 35.0%
CATTAAAACCCTGTCTAAGT+TGG - Chr5:38134768-38134787 MsG0580026474.01.T01:intron 35.0%
GACTCGATACATTCATAGTT+GGG - Chr5:38135268-38135287 MsG0580026474.01.T01:CDS 35.0%
GATATCGACATCGATGATAA+AGG - Chr5:38134271-38134290 MsG0580026474.01.T01:CDS 35.0%
GATTTCATGAAACTCCTTTC+TGG - Chr5:38134655-38134674 MsG0580026474.01.T01:intron 35.0%
TCTTCAATAGTTGAAACGCT+TGG + Chr5:38134721-38134740 None:intergenic 35.0%
TTCAGTTCGTTTCCAAGATA+GGG - Chr5:38134630-38134649 MsG0580026474.01.T01:intron 35.0%
TTTCAGTTCGTTTCCAAGAT+AGG - Chr5:38134629-38134648 MsG0580026474.01.T01:intron 35.0%
! AGATGTAGGGTTTTCAACAA+AGG + Chr5:38134607-38134626 None:intergenic 35.0%
! TACTTGCGTTTTTCATGGAA+TGG + Chr5:38134069-38134088 None:intergenic 35.0%
! TTTTATGGTACTGTGCAGAT+GGG - Chr5:38135161-38135180 MsG0580026474.01.T01:CDS 35.0%
! TTTTTATGGTACTGTGCAGA+TGG - Chr5:38135160-38135179 MsG0580026474.01.T01:CDS 35.0%
AAGTGTTCTGCAGCAGAAAA+TGG + Chr5:38134524-38134543 None:intergenic 40.0%
ACACATTCAGGAACATGACA+TGG + Chr5:38135485-38135504 None:intergenic 40.0%
ACTCTTGACCTGAAACCAAA+GGG - Chr5:38135623-38135642 MsG0580026474.01.T01:CDS 40.0%
AGTCCAGTATAGTAGAAGGT+GGG + Chr5:38135252-38135271 None:intergenic 40.0%
ATACATTCATAGTTGGGACG+AGG - Chr5:38135274-38135293 MsG0580026474.01.T01:CDS 40.0%
ATCACTTTCAGCTTACACGT+GGG + Chr5:38135695-38135714 None:intergenic 40.0%
ATCGAGTCCAGTATAGTAGA+AGG + Chr5:38135256-38135275 None:intergenic 40.0%
GAAGAATTCATCAACCAACG+CGG - Chr5:38135448-38135467 MsG0580026474.01.T01:CDS 40.0%
GAGTTTGGCAGATATTCATG+TGG - Chr5:38134552-38134571 MsG0580026474.01.T01:CDS 40.0%
GATTCAGTTCCGTCATATGT+TGG - Chr5:38134315-38134334 MsG0580026474.01.T01:intron 40.0%
GGACTCGATACATTCATAGT+TGG - Chr5:38135267-38135286 MsG0580026474.01.T01:CDS 40.0%
TAACCCACCTTCTACTATAC+TGG - Chr5:38135246-38135265 MsG0580026474.01.T01:CDS 40.0%
TAACTGCGTCCAACATATGA+CGG + Chr5:38134327-38134346 None:intergenic 40.0%
TACTCTTGACCTGAAACCAA+AGG - Chr5:38135622-38135641 MsG0580026474.01.T01:CDS 40.0%
TATCACTTTCAGCTTACACG+TGG + Chr5:38135696-38135715 None:intergenic 40.0%
TCATGAAATCCACCCTATCT+TGG + Chr5:38134645-38134664 None:intergenic 40.0%
TGTCGATATCGGAGAGTAAA+TGG + Chr5:38134261-38134280 None:intergenic 40.0%
TGTGAGTTAGTATATCGTCG+TGG + Chr5:38134168-38134187 None:intergenic 40.0%
! CATACATTTTGCTGAATGCG+AGG - Chr5:38135573-38135592 MsG0580026474.01.T01:CDS 40.0%
! GCGTTTTTCATGGAATGGAA+TGG + Chr5:38134064-38134083 None:intergenic 40.0%
! TGCAAATCGAAAATCGGCTT+CGG + Chr5:38135552-38135571 None:intergenic 40.0%
!! AACACTTGTGGTTCTGAGTT+TGG - Chr5:38134537-38134556 MsG0580026474.01.T01:CDS 40.0%
!! AAGAGCACTCTATAATGTCC+AGG - Chr5:38134825-38134844 MsG0580026474.01.T01:intron 40.0%
!! AGGTTGGTTTGTCACAACAA+TGG - Chr5:38135348-38135367 MsG0580026474.01.T01:CDS 40.0%
!! GTTCTGAAGGCATCTTTGAT+TGG + Chr5:38134205-38134224 None:intergenic 40.0%
!! GTTTTAATGTACCCTTTCGC+TGG + Chr5:38134757-38134776 None:intergenic 40.0%
!! TCCAGGCTCTAGAAGTAATT+GGG - Chr5:38134842-38134861 MsG0580026474.01.T01:intron 40.0%
AGTTCGTTTCCAAGATAGGG+TGG - Chr5:38134633-38134652 MsG0580026474.01.T01:intron 45.0%
ATAAAATGGGGGTTCCCCTT+TGG + Chr5:38135641-38135660 None:intergenic 45.0%
ATTCATCAACCAACGCGGAT+TGG - Chr5:38135453-38135472 MsG0580026474.01.T01:CDS 45.0%
CAGAAAATGGTAGGTGCCAA+AGG + Chr5:38134511-38134530 None:intergenic 45.0%
CTCTTGACCTGAAACCAAAG+GGG - Chr5:38135624-38135643 MsG0580026474.01.T01:CDS 45.0%
GAGTCCAGTATAGTAGAAGG+TGG + Chr5:38135253-38135272 None:intergenic 45.0%
GGCCAGTATCTGTTTATTCG+AGG - Chr5:38134795-38134814 MsG0580026474.01.T01:intron 45.0%
GTTCTGCAGCAGAAAATGGT+AGG + Chr5:38134520-38134539 None:intergenic 45.0%
TCGGAGAGTAAATGGCACAA+CGG + Chr5:38134253-38134272 None:intergenic 45.0%
TGGATATTTCCAATCCGCGT+TGG + Chr5:38135465-38135484 None:intergenic 45.0%
TTACACGTGGGAGAGATCTT+AGG + Chr5:38135683-38135702 None:intergenic 45.0%
TTTCTGCTGCAGAACACTTG+TGG - Chr5:38134525-38134544 MsG0580026474.01.T01:CDS 45.0%
! CAGGTCAAGAGTACAGAGAA+TGG + Chr5:38135615-38135634 None:intergenic 45.0%
! TGCTGAATGCGAGGCTTTTA+CGG - Chr5:38135582-38135601 MsG0580026474.01.T01:CDS 45.0%
!! CCAGGCTCTAGAAGTAATTG+GGG - Chr5:38134843-38134862 MsG0580026474.01.T01:intron 45.0%
!! GTCCAGGCTCTAGAAGTAAT+TGG - Chr5:38134841-38134860 MsG0580026474.01.T01:intron 45.0%
AATCAGCCTTAGCATCCCAG+AGG + Chr5:38134411-38134430 None:intergenic 50.0%
AGGCTAGACGTGACACATTC+AGG + Chr5:38135497-38135516 None:intergenic 50.0%
CCAATTTCGGGCATCCAGAA+AGG + Chr5:38134672-38134691 None:intergenic 50.0%
CCTTTCTGGATGCCCGAAAT+TGG - Chr5:38134669-38134688 MsG0580026474.01.T01:intron 50.0%
CGGAGAGTAAATGGCACAAC+GGG + Chr5:38134252-38134271 None:intergenic 50.0%
GAAAACGTCGCCATCGCAAT+CGG - Chr5:38134111-38134130 MsG0580026474.01.T01:CDS 50.0%
! CAAGTGTTGTTCCAGCCTCT+GGG - Chr5:38134393-38134412 MsG0580026474.01.T01:intron 50.0%
! GCTGAATGCGAGGCTTTTAC+GGG - Chr5:38135583-38135602 MsG0580026474.01.T01:CDS 50.0%
! TATGTTTTCCCCACGCTCTC+AGG - Chr5:38134345-38134364 MsG0580026474.01.T01:intron 50.0%
! TCAAGTGTTGTTCCAGCCTC+TGG - Chr5:38134392-38134411 MsG0580026474.01.T01:intron 50.0%
!! AACCCTGTCTAAGTTGGTCG+AGG - Chr5:38134774-38134793 MsG0580026474.01.T01:intron 50.0%
!! CCCCAATTACTTCTAGAGCC+TGG + Chr5:38134846-38134865 None:intergenic 50.0%
!! CGAGAGAATGGTGGTTCTGA+AGG + Chr5:38134218-38134237 None:intergenic 50.0%
AATGGCGGTGTTCCAGCGAA+AGG - Chr5:38134742-38134761 MsG0580026474.01.T01:intron 55.0%
ATGGCGGTGTTCCAGCGAAA+GGG - Chr5:38134743-38134762 MsG0580026474.01.T01:intron 55.0%
CCACCATTCTCTCGCAGAGA+TGG - Chr5:38134224-38134243 MsG0580026474.01.T01:CDS 55.0%
CCATCTCTGCGAGAGAATGG+TGG + Chr5:38134227-38134246 None:intergenic 55.0%
CGTGGGAGAGATCTTAGGAG+AGG + Chr5:38135678-38135697 None:intergenic 55.0%
GAGCCATCTCTGCGAGAGAA+TGG + Chr5:38134230-38134249 None:intergenic 55.0%
GGCCTCGACCAACTTAGACA+GGG + Chr5:38134779-38134798 None:intergenic 55.0%
GGGAGAGATCTTAGGAGAGG+AGG + Chr5:38135675-38135694 None:intergenic 55.0%
TGGCCTCGACCAACTTAGAC+AGG + Chr5:38134780-38134799 None:intergenic 55.0%
!! TTCCAGCCTCTGGGATGCTA+AGG - Chr5:38134402-38134421 MsG0580026474.01.T01:intron 55.0%
AGCCTTAGCATCCCAGAGGC+TGG + Chr5:38134407-38134426 None:intergenic 60.0%
AGGGTACAGTCCTGAGAGCG+TGG + Chr5:38134358-38134377 None:intergenic 60.0%
! GGGGGTTCCCCTTTGGTTTC+AGG + Chr5:38135634-38135653 None:intergenic 60.0%
! GGGTACAGTCCTGAGAGCGT+GGG + Chr5:38134357-38134376 None:intergenic 60.0%
! GGTACAGTCCTGAGAGCGTG+GGG + Chr5:38134356-38134375 None:intergenic 60.0%
! TCTACCGTCGCCGATTGCGA+TGG + Chr5:38134124-38134143 None:intergenic 60.0%
GTCGCCATCGCAATCGGCGA+CGG - Chr5:38134117-38134136 MsG0580026474.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 38134052 38135718 38134052 ID=MsG0580026474.01;Name=MsG0580026474.01
Chr5 mRNA 38134052 38135718 38134052 ID=MsG0580026474.01.T01;Parent=MsG0580026474.01;Name=MsG0580026474.01.T01;_AED=0.42;_eAED=0.42;_QI=0|0|0|1|1|1|3|0|418
Chr5 exon 38134906 38135718 38134906 ID=MsG0580026474.01.T01:exon:4405;Parent=MsG0580026474.01.T01
Chr5 exon 38134421 38134591 38134421 ID=MsG0580026474.01.T01:exon:4404;Parent=MsG0580026474.01.T01
Chr5 exon 38134052 38134324 38134052 ID=MsG0580026474.01.T01:exon:4403;Parent=MsG0580026474.01.T01
Chr5 CDS 38134906 38135718 38134906 ID=MsG0580026474.01.T01:cds;Parent=MsG0580026474.01.T01
Chr5 CDS 38134421 38134591 38134421 ID=MsG0580026474.01.T01:cds;Parent=MsG0580026474.01.T01
Chr5 CDS 38134052 38134324 38134052 ID=MsG0580026474.01.T01:cds;Parent=MsG0580026474.01.T01
Gene Sequence

>MsG0580026474.01.T01

ATGAAGAAGCCATTCCATTCCATGAAAAACGCAAGTAAAACAGATAGTGGTAAGAGAAAGAAAACGTCGCCATCGCAATCGGCGACGGTAGATAACAACACCATTAATGATTTCCACGACGATATACTAACTCACATAATCTCTTTTCTTCCAATCAAAGATGCCTTCAGAACCACCATTCTCTCGCAGAGATGGCTCCCGTTGTGCCATTTACTCTCCGATATCGACATCGATGATAAAGGCATAAAAAATGCAGAGGACTTGATTCAGTTCCGTCATATGTTGGACGCAGTTATGTTTTCCCCACGCTCTCAGGACTGTACCCTCAAATCTTTTAAACTCAAGTGTTGTTCCAGCCTCTGGGATGCTAAGGCTGATTGTTTCAGTATCGACAAATGGGTTGAAGCAGCAAAACGACGCCGCATTGAGTATCTCGATCTATACTTGTTTGAAAATCCTTTGGCACCTACCATTTTCTGCTGCAGAACACTTGTGGTTCTGAGTTTGGCAGATATTCATGTGGCCGATATGTTTGATTGTTCTGTTCATCTTCCTTTGTTGAAAACCCTACATCTGATTTCAGTTCGTTTCCAAGATAGGGTGGATTTCATGAAACTCCTTTCTGGATGCCCGAAATTGGAATATTTAATTACAATTTTAATAAAGCCAAGCGTTTCAACTATTGAAGAAAATGGCGGTGTTCCAGCGAAAGGGTACATTAAAACCCTGTCTAAGTTGGTCGAGGCCAGTATCTGTTTATTCGAGGTTCCGTTAAGAGCACTCTATAATGTCCAGGCTCTAGAAGTAATTGGGATGGGAAAGTTTATTGACAATGAAGAAATCAATTCATATTGCAAAGGATTTCCGATGTTTGAAAACTTAACCCACCTTCTACTATACTGGACTCGATACATTCATAGTTGGGACGAGGTAATGAAAATGCTACAAAATTGTCCCAAACTTCAAGCTCTTAAAATTAAAAAGTTGAAGAATTCATCAACCAACGCGGATTGGAAATATCCATGTCATGTTCCTGAATGTGTCACGTCTAGCCTAACAACATGCAGAATTGAAAACTATGAAGCTTCCGAAGCCGATTTTCGATTTGCAACATACATTTTGCTGAATGCGAGGCTTTTACGGGTTATGACCATTCTCTGTACTCTTGACCTGAAACCAAAGGGGAACCCCCATTTTATAGAAGATTTATCCTCCTCTCCTAAGATCTCTCCCACGTGTAAGCTGAAAGTGATATGA
Protein sequence

>MsG0580026474.01.T01

MKKPFHSMKNASKTDSGKRKKTSPSQSATVDNNTINDFHDDILTHIISFLPIKDAFRTTILSQRWLPLCHLLSDIDIDDKGIKNAEDLIQFRHMLDAVMFSPRSQDCTLKSFKLKCCSSLWDAKADCFSIDKWVEAAKRRRIEYLDLYLFENPLAPTIFCCRTLVVLSLADIHVADMFDCSVHLPLLKTLHLISVRFQDRVDFMKLLSGCPKLEYLITILIKPSVSTIEENGGVPAKGYIKTLSKLVEASICLFEVPLRALYNVQALEVIGMGKFIDNEEINSYCKGFPMFENLTHLLLYWTRYIHSWDEVMKMLQNCPKLQALKIKKLKNSSTNADWKYPCHVPECVTSSLTTCRIENYEASEADFRFATYILLNARLLRVMTILCTLDLKPKGNPHFIEDLSSSPKISPTCKLKVI*