AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780037524.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037524.01.T01 MTR_3g107120 42.105 361 198 6 83 436 34 390 7.53e-71 229
MsG0780037524.01.T01 MTR_3g107100 45.122 328 153 8 130 436 76 397 1.23e-69 226
MsG0780037524.01.T01 MTR_1g053025 43.769 329 157 11 130 437 68 389 1.79e-64 212
MsG0780037524.01.T01 MTR_2g007450 42.529 348 154 13 130 438 81 421 5.23e-62 207
MsG0780037524.01.T01 MTR_3g107160 42.444 311 173 6 130 436 74 382 1.13e-61 205
MsG0780037524.01.T01 MTR_7g075820 39.516 372 188 13 89 437 37 394 3.19e-60 201
MsG0780037524.01.T01 MTR_1g107385 38.479 434 217 18 33 437 11 423 4.36e-55 189
MsG0780037524.01.T01 MTR_2g008320 42.006 319 162 10 131 436 118 426 2.09e-54 187
MsG0780037524.01.T01 MTR_2g007400 40.606 330 169 13 130 436 77 402 4.72e-54 186
MsG0780037524.01.T01 MTR_2g005990 41.584 303 149 9 156 437 100 395 2.60e-51 178
MsG0780037524.01.T01 MTR_2g008310 42.006 319 158 12 130 436 67 370 2.95e-49 172
MsG0780037524.01.T01 MTR_5g083890 39.481 347 168 15 122 436 68 404 1.50e-48 173
MsG0780037524.01.T01 MTR_3g099830 39.252 321 168 12 134 437 64 374 1.35e-46 165
MsG0780037524.01.T01 MTR_7g007080 39.634 328 163 12 130 438 69 380 2.76e-46 164
MsG0780037524.01.T01 MTR_4g098590 38.782 312 162 12 130 421 64 366 1.37e-44 159
MsG0780037524.01.T01 MTR_7g034090 54.268 164 68 2 277 434 147 309 3.43e-43 157
MsG0780037524.01.T01 MTR_7g034090 55.422 83 28 3 130 211 74 148 2.47e-14 75.1
MsG0780037524.01.T01 MTR_7g083740 37.966 295 148 10 159 437 92 367 8.61e-43 155
MsG0780037524.01.T01 MTR_3g026920 35.942 345 159 13 130 436 84 404 1.27e-42 155
MsG0780037524.01.T01 MTR_1g041245 37.072 321 176 13 130 434 73 383 1.08e-39 147
MsG0780037524.01.T01 MTR_7g007340 41.667 264 124 10 183 431 103 351 1.72e-39 145
MsG0780037524.01.T01 MTR_7g056280 40.976 205 113 3 240 436 368 572 8.19e-39 148
MsG0780037524.01.T01 MTR_2g007360 37.500 296 154 11 166 437 86 374 1.02e-38 144
MsG0780037524.01.T01 MTR_3g036250 33.913 345 186 12 111 434 40 363 2.38e-37 140
MsG0780037524.01.T01 MTR_7g034120 35.625 320 175 14 131 434 1 305 2.74e-36 135
MsG0780037524.01.T01 MTR_2g007500 38.824 255 128 8 154 387 85 332 1.44e-35 134
MsG0780037524.01.T01 MTR_3g106960 44.737 190 100 4 245 429 1 190 1.75e-34 129
MsG0780037524.01.T01 MTR_7g098570 34.659 352 200 11 103 433 47 389 2.64e-34 134
MsG0780037524.01.T01 MTR_6g029350 42.029 207 102 8 238 436 1 197 2.22e-33 126
MsG0780037524.01.T01 MTR_2g007550 36.727 275 101 9 180 438 119 336 2.70e-33 128
MsG0780037524.01.T01 MTR_7g055943 33.651 315 179 10 139 434 115 418 3.74e-33 130
MsG0780037524.01.T01 MTR_5g058100 33.537 328 184 10 125 434 70 381 6.19e-33 128
MsG0780037524.01.T01 MTR_7g098510 33.856 319 181 12 134 435 84 389 1.02e-32 128
MsG0780037524.01.T01 MTR_6g045333 33.333 327 190 11 127 434 126 443 1.06e-32 129
MsG0780037524.01.T01 MTR_3g108150 32.615 325 186 8 130 435 75 385 1.21e-32 127
MsG0780037524.01.T01 MTR_7g033990 32.323 297 169 11 129 410 72 351 8.52e-32 125
MsG0780037524.01.T01 MTR_6g022500 33.010 309 187 9 139 436 176 475 2.79e-31 125
MsG0780037524.01.T01 MTR_7g056433 33.333 327 184 14 130 435 74 387 3.07e-31 124
MsG0780037524.01.T01 MTR_4g039440 32.523 329 185 11 130 434 94 409 7.91e-31 123
MsG0780037524.01.T01 MTR_7g115270 32.432 333 186 9 132 434 76 399 9.21e-31 122
MsG0780037524.01.T01 MTR_7g032370 32.166 314 180 10 134 434 56 349 9.83e-31 121
MsG0780037524.01.T01 MTR_2g007090 39.419 241 114 10 206 437 77 294 3.67e-30 119
MsG0780037524.01.T01 MTR_5g007410 34.932 292 161 10 164 435 124 406 1.33e-29 120
MsG0780037524.01.T01 MTR_6g040270 31.677 322 196 8 125 434 69 378 6.20e-29 117
MsG0780037524.01.T01 MTR_7g032380 31.494 308 160 10 140 434 84 353 6.26e-29 116
MsG0780037524.01.T01 MTR_7g098480 35.370 311 177 9 134 431 84 383 7.79e-29 118
MsG0780037524.01.T01 MTR_1g085120 32.622 328 191 12 125 434 153 468 9.08e-29 118
MsG0780037524.01.T01 MTR_1g085120 32.622 328 191 12 125 434 228 543 1.16e-28 118
MsG0780037524.01.T01 MTR_7g026500 32.424 330 165 15 139 435 89 393 1.43e-28 116
MsG0780037524.01.T01 MTR_7g034115 33.333 297 164 12 130 410 73 351 4.11e-28 115
MsG0780037524.01.T01 MTR_0543s0010 32.911 316 179 9 134 435 152 448 1.66e-27 114
MsG0780037524.01.T01 MTR_3g040700 35.211 284 145 12 133 402 108 366 2.17e-27 114
MsG0780037524.01.T01 MTR_2g036470 34.602 289 162 9 164 434 114 393 5.30e-27 112
MsG0780037524.01.T01 MTR_1g108820 33.333 321 175 15 140 436 80 385 7.48e-27 111
MsG0780037524.01.T01 MTR_7g088260 30.312 320 197 9 130 435 153 460 9.38e-27 112
MsG0780037524.01.T01 MTR_3g108560 32.344 337 191 13 117 435 70 387 2.56e-26 110
MsG0780037524.01.T01 MTR_5g045170 30.303 330 207 9 125 438 70 392 2.73e-26 110
MsG0780037524.01.T01 MTR_3g105060 31.861 317 193 10 125 435 72 371 5.51e-26 108
MsG0780037524.01.T01 MTR_7g075800 32.660 297 149 12 161 409 101 394 9.50e-26 110
MsG0780037524.01.T01 MTR_5g008950 30.961 281 161 9 171 434 98 362 1.15e-25 108
MsG0780037524.01.T01 MTR_7g033915 32.710 321 169 15 130 434 73 362 2.04e-25 107
MsG0780037524.01.T01 MTR_5g012840 30.450 289 141 8 130 410 51 287 2.98e-25 105
MsG0780037524.01.T01 MTR_0492s0020 32.667 300 175 8 134 425 152 432 3.24e-25 107
MsG0780037524.01.T01 MTR_6g022520 32.710 321 188 10 131 434 1 310 4.46e-25 105
MsG0780037524.01.T01 MTR_1089s0010 30.145 345 200 10 102 434 61 376 4.49e-25 106
MsG0780037524.01.T01 MTR_5g013500 28.022 364 197 13 109 435 28 363 5.89e-25 105
MsG0780037524.01.T01 MTR_3g087260 34.286 280 167 7 168 435 181 455 6.01e-25 107
MsG0780037524.01.T01 MTR_1g066830 32.416 327 193 9 125 434 69 384 6.83e-25 105
MsG0780037524.01.T01 MTR_5g058000 32.099 324 186 9 125 434 69 372 8.47e-25 105
MsG0780037524.01.T01 MTR_3g082890 30.709 381 209 13 87 435 125 482 1.35e-24 106
MsG0780037524.01.T01 MTR_6g011460 31.707 328 186 10 127 434 109 418 2.14e-24 105
MsG0780037524.01.T01 MTR_3g023630 30.372 349 198 13 111 434 43 371 2.91e-24 103
MsG0780037524.01.T01 MTR_5g008920 30.128 312 203 7 131 434 74 378 2.93e-24 103
MsG0780037524.01.T01 MTR_3g071850 32.407 324 187 14 127 429 89 401 4.52e-24 105
MsG0780037524.01.T01 MTR_5g073420 32.281 285 164 9 164 435 110 378 6.48e-24 103
MsG0780037524.01.T01 MTR_5g045510 33.684 285 153 9 164 434 107 369 8.70e-24 102
MsG0780037524.01.T01 MTR_6g022360 31.778 343 195 13 115 435 81 406 2.51e-23 101
MsG0780037524.01.T01 MTR_1g108800 36.364 264 131 13 191 434 93 339 3.65e-23 100
MsG0780037524.01.T01 MTR_7g007370 35.178 253 142 7 186 430 92 330 6.65e-23 99.4
MsG0780037524.01.T01 MTR_7g056420 30.960 323 168 11 130 431 71 359 1.02e-22 102
MsG0780037524.01.T01 MTR_3g107140 49.600 125 61 2 140 263 73 196 1.06e-22 95.9
MsG0780037524.01.T01 MTR_7g056430 30.960 323 168 11 130 431 71 359 1.42e-22 101
MsG0780037524.01.T01 MTR_7g056020 30.968 310 182 9 131 429 72 360 2.48e-22 100
MsG0780037524.01.T01 MTR_5g073370 30.827 266 160 9 150 410 101 347 3.60e-22 98.2
MsG0780037524.01.T01 MTR_2g007610 48.413 126 58 4 315 436 28 150 3.62e-22 93.6
MsG0780037524.01.T01 MTR_5g031970 29.630 324 183 10 125 434 61 353 4.67e-21 94.4
MsG0780037524.01.T01 MTR_5g054920 36.364 187 97 7 235 410 2 177 3.88e-20 88.2
MsG0780037524.01.T01 MTR_7g056287 30.682 352 196 15 111 434 38 369 4.34e-20 91.7
MsG0780037524.01.T01 MTR_0009s0080 33.977 259 151 9 164 410 117 367 5.47e-20 92.0
MsG0780037524.01.T01 MTR_3g094980 44.037 109 58 2 322 427 26 134 1.18e-19 86.3
MsG0780037524.01.T01 MTR_3g082890 28.230 418 208 14 87 435 45 439 1.87e-19 90.5
MsG0780037524.01.T01 MTR_7g056277 32.143 308 180 12 139 434 335 625 1.91e-19 91.3
MsG0780037524.01.T01 MTR_7g060470 30.864 324 166 13 147 435 91 391 2.52e-19 89.7
MsG0780037524.01.T01 MTR_5g039450 29.538 325 180 11 125 435 67 356 4.14e-19 88.6
MsG0780037524.01.T01 MTR_3g109982 32.031 256 158 6 188 435 220 467 1.10e-18 89.4
MsG0780037524.01.T01 MTR_5g063950 32.110 327 192 15 127 436 48 361 2.06e-18 86.7
MsG0780037524.01.T01 MTR_5g039470 29.831 295 181 10 125 406 46 327 2.32e-18 86.3
MsG0780037524.01.T01 MTR_7g114710 29.345 351 176 16 104 435 65 362 4.60e-18 85.9
MsG0780037524.01.T01 MTR_3g467400 30.272 294 156 10 164 435 99 365 1.23e-17 84.3
MsG0780037524.01.T01 MTR_6g044572 29.240 342 175 12 132 434 72 385 1.41e-17 84.7
MsG0780037524.01.T01 MTR_6g044560 29.240 342 175 12 132 434 248 561 3.04e-17 84.3
MsG0780037524.01.T01 MTR_2g007530 40.945 127 58 3 310 436 227 336 4.70e-17 82.4
MsG0780037524.01.T01 MTR_1g053050 47.561 82 42 1 357 437 34 115 9.86e-17 76.3
MsG0780037524.01.T01 MTR_4g080610 30.702 228 140 6 217 432 126 347 1.55e-16 81.3
MsG0780037524.01.T01 MTR_5g084070 30.519 308 152 11 188 438 126 428 1.63e-16 81.6
MsG0780037524.01.T01 MTR_8g467800 27.246 345 178 13 158 434 111 450 5.69e-16 80.1
MsG0780037524.01.T01 MTR_7g022105 29.008 262 175 7 159 413 139 396 1.48e-15 78.6
MsG0780037524.01.T01 MTR_7g021990 29.545 264 171 8 159 413 138 395 2.07e-15 78.2
MsG0780037524.01.T01 MTR_7g021950 29.545 264 171 8 159 413 138 395 2.74e-15 78.2
MsG0780037524.01.T01 MTR_5g073340 32.367 207 117 8 188 379 102 300 5.29e-15 75.9
MsG0780037524.01.T01 MTR_2g020180 31.818 220 121 8 228 435 11 213 1.30e-14 73.2
MsG0780037524.01.T01 MTR_8g085430 42.727 110 53 4 330 432 211 317 2.06e-14 74.3
MsG0780037524.01.T01 MTR_5g039490 30.526 285 152 11 164 434 121 373 7.25e-14 73.2
MsG0780037524.01.T01 MTR_8g058965 27.042 355 174 15 157 434 107 453 2.04e-13 72.4
MsG0780037524.01.T01 MTR_8g077460 27.451 255 156 7 187 434 140 372 4.78e-13 70.9
MsG0780037524.01.T01 MTR_1g038710 28.533 375 192 13 136 438 82 452 6.96e-13 70.5
MsG0780037524.01.T01 MTR_4g130200 28.395 243 137 8 214 423 135 373 2.22e-12 68.9
MsG0780037524.01.T01 MTR_1377s0010 36.000 125 74 3 288 410 7 127 6.78e-12 63.2
MsG0780037524.01.T01 MTR_5g024060 37.302 126 67 4 313 430 80 201 8.44e-12 65.5
MsG0780037524.01.T01 MTR_1g085120 30.213 235 145 8 125 348 240 466 2.76e-11 65.9
MsG0780037524.01.T01 MTR_5g080710 30.033 303 146 10 188 429 149 446 3.30e-11 65.5
MsG0780037524.01.T01 MTR_7g081290 33.962 106 61 2 313 410 124 228 4.24e-11 63.5
MsG0780037524.01.T01 MTR_5g092960 35.338 133 78 4 312 437 331 462 5.33e-11 64.7
MsG0780037524.01.T01 MTR_8g062270 32.331 133 77 5 312 434 322 451 8.82e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037524.01.T01 AT3G26920 29.153 295 178 7 163 435 14 299 1.85e-13 71.2
MsG0780037524.01.T01 AT5G52460 28.571 315 195 9 146 435 58 367 3.10e-12 68.2
MsG0780037524.01.T01 AT1G51370 24.650 357 197 14 140 436 90 434 7.35e-12 67.4
MsG0780037524.01.T01 AT5G52460 30.797 276 177 8 169 435 13 283 1.16e-11 65.9

Find 92 sgRNAs with CRISPR-Local

Find 273 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATACTAATGGGTAATTT+TGG 0.169767 7:-27707656 None:intergenic
CTTTGAGTGTTGATTTCTTT+AGG 0.227726 7:+27706395 MsG0780037524.01.T01:CDS
TTTGAGTGTTGATTTCTTTA+GGG 0.255929 7:+27706396 MsG0780037524.01.T01:CDS
TTCTCTCAAAACTCTTCATT+TGG 0.264967 7:+27707754 MsG0780037524.01.T01:CDS
CTCTTCATTTGGAACGGTTT+CGG 0.296222 7:+27707765 MsG0780037524.01.T01:CDS
CCTGCATGTTAAAATACTAA+TGG 0.310426 7:-27707666 None:intergenic
AGGCTTACAATATGAGATTA+TGG 0.316034 7:+27708519 MsG0780037524.01.T01:CDS
TACTTCTCGTAGATATAGTT+TGG 0.316746 7:+27708157 MsG0780037524.01.T01:CDS
CCATATGGAGATACTGTTAC+TGG 0.336776 7:-27707570 None:intergenic
AACATAAAATCTCGAAGTTC+GGG 0.338123 7:-27707791 None:intergenic
GAAAATTATCCTCATTTCCT+AGG 0.352171 7:+27708620 MsG0780037524.01.T01:CDS
TTACTGGGGCAGTGATGTTC+AGG 0.359259 7:-27707554 None:intergenic
CACGTCAATGTGCTCAATAT+TGG 0.361890 7:-27705460 None:intergenic
AGGCATTGTGGAACAACATC+TGG 0.363946 7:-27708457 None:intergenic
TTCCGTCTCAAGGCGCTATA+TGG 0.369732 7:+27707527 MsG0780037524.01.T01:CDS
ATGTCTCGGCCAGCACCTTT+TGG 0.373188 7:+27705265 MsG0780037524.01.T01:CDS
TAACATAAAATCTCGAAGTT+CGG 0.375540 7:-27707792 None:intergenic
TCTGAGCTTTGAATTTGATC+AGG 0.377289 7:+27707991 MsG0780037524.01.T01:CDS
TTGAGACGGAAAGTCTTAAT+AGG 0.377890 7:-27707515 None:intergenic
TCTTACAAACAATGAAAATC+TGG 0.379945 7:+27708572 MsG0780037524.01.T01:CDS
GTCACTTCCATGGCTGCTGC+TGG 0.383681 7:-27705207 None:intergenic
GGAGACTTTAATGTTGTGTT+TGG 0.396462 7:+27706331 MsG0780037524.01.T01:CDS
CAAGCGGATATTGATATTGT+TGG 0.401543 7:+27707929 MsG0780037524.01.T01:CDS
CTGCATGTTAAAATACTAAT+GGG 0.408885 7:-27707665 None:intergenic
AGAAATCAACACTCAAAGTT+GGG 0.409495 7:-27706390 None:intergenic
CTCCATATGGCTCAACTTTG+TGG 0.414754 7:+27707583 MsG0780037524.01.T01:CDS
CATCTCTATGTGGACAGAAC+AGG 0.419257 7:+27707629 MsG0780037524.01.T01:CDS
AAGAAATCAACACTCAAAGT+TGG 0.432835 7:-27706391 None:intergenic
GTGCTGGCCGAGACATCTAT+TGG 0.436372 7:-27705258 None:intergenic
TTCTGTCCACATAGAGATGA+AGG 0.442111 7:-27707625 None:intergenic
AATAGGAAGTGCAGCATCTC+GGG 0.459627 7:-27707498 None:intergenic
AGAGTTTCTTGTCACTTCCA+TGG 0.472644 7:-27705217 None:intergenic
GTGCTCATGAGGGTTATGTT+TGG 0.475127 7:+27706353 MsG0780037524.01.T01:CDS
CTGGTCAAATTATGAAAAGT+AGG 0.481442 7:-27708125 None:intergenic
ACATTGCTAACTGCTTTCAA+TGG 0.482926 7:-27707962 None:intergenic
TCAAAAGCTTGACATTGATC+CGG 0.488553 7:+27708217 MsG0780037524.01.T01:CDS
TACCACAAAGTTGAGCCATA+TGG 0.494982 7:-27707585 None:intergenic
CCAGTAACAGTATCTCCATA+TGG 0.498155 7:+27707570 MsG0780037524.01.T01:CDS
GCTCAACTTTGTGGTACCGC+GGG 0.498818 7:+27707592 MsG0780037524.01.T01:CDS
AGAGGAGAGGTTGGACATTG+AGG 0.503080 7:+27705401 MsG0780037524.01.T01:intron
TATTAAGACTTTCCGTCTCA+AGG 0.504509 7:+27707517 MsG0780037524.01.T01:CDS
CATATGGAGATACTGTTACT+GGG 0.508311 7:-27707569 None:intergenic
GGAAGTGACAAGAAACTCTT+CGG 0.509897 7:+27705221 MsG0780037524.01.T01:CDS
TTCACCTCCAATAGATGTCT+CGG 0.515193 7:+27705251 MsG0780037524.01.T01:CDS
AAGAGATTCCTCAGGATCAA+AGG 0.515336 7:-27707864 None:intergenic
GGTTCCGCCAGCAGCAGCCA+TGG 0.516709 7:+27705200 MsG0780037524.01.T01:CDS
TCAAAACTCTTCATTTGGAA+CGG 0.523837 7:+27707759 MsG0780037524.01.T01:CDS
CAACAATATCAATATCCGCT+TGG 0.525803 7:-27707928 None:intergenic
AGGGCAGGTACCACGACCCT+TGG 0.529702 7:+27706299 MsG0780037524.01.T01:intron
TGTTGTGTTTGGTGCTCATG+AGG 0.531764 7:+27706342 MsG0780037524.01.T01:CDS
AAAATTATCCTCATTTCCTA+GGG 0.531835 7:+27708621 MsG0780037524.01.T01:CDS
AGAGATTCCTCAGGATCAAA+GGG 0.541264 7:-27707863 None:intergenic
TAATAGGAAGTGCAGCATCT+CGG 0.546702 7:-27707499 None:intergenic
ACTTCCATGGCTGCTGCTGG+CGG 0.546752 7:-27705204 None:intergenic
CTTAAATAACTTGATCCAAG+CGG 0.552272 7:+27707913 MsG0780037524.01.T01:CDS
GTTGTGTTTGGTGCTCATGA+GGG 0.553978 7:+27706343 MsG0780037524.01.T01:CDS
GTTGGACATTGAGGTCTCAA+AGG 0.557056 7:+27705410 MsG0780037524.01.T01:CDS
TGCTCAATATTGGAAACAGA+TGG 0.562672 7:-27705450 None:intergenic
GGCTCAACTTTGTGGTACCG+CGG 0.563084 7:+27707591 MsG0780037524.01.T01:CDS
ACAATGAAAATCTGGAATGG+TGG 0.567547 7:+27708580 MsG0780037524.01.T01:CDS
TGAAGAGGCCCTAGGAAATG+AGG 0.570759 7:-27708629 None:intergenic
AATCTCTTACCTCTGAGGAA+TGG 0.572764 7:+27707879 MsG0780037524.01.T01:CDS
GAAATCAACACTCAAAGTTG+GGG 0.573695 7:-27706389 None:intergenic
TTGGACATTGAGGTCTCAAA+GGG 0.575298 7:+27705411 MsG0780037524.01.T01:CDS
GATTTCTTTAGGGACAGATG+TGG 0.575609 7:+27706406 MsG0780037524.01.T01:CDS
GGCATTGTGGAACAACATCT+GGG 0.579794 7:-27708456 None:intergenic
CAAACAATGAAAATCTGGAA+TGG 0.580128 7:+27708577 MsG0780037524.01.T01:CDS
AACCATATAGCGCCTTGAGA+CGG 0.582700 7:-27707529 None:intergenic
GAGTGCAAACCAAAAGGTGC+TGG 0.583949 7:-27705274 None:intergenic
TTTGGTTTCTGTATGGACGA+GGG 0.585200 7:+27707710 MsG0780037524.01.T01:CDS
TATATGTGAGCAAATTCTCA+AGG 0.587884 7:-27707835 None:intergenic
TATAAGCTCACATGTTGAAG+AGG 0.590303 7:-27708644 None:intergenic
TAATGTGCCCTTTGATCCTG+AGG 0.590596 7:+27707856 MsG0780037524.01.T01:CDS
ATTGTTGAGTGCAAACCAAA+AGG 0.593969 7:-27705280 None:intergenic
GGAAAGAAATCTTCACAGCA+AGG 0.604161 7:-27708104 None:intergenic
ACGAGAAGTAAACTCCAGCC+TGG 0.604861 7:-27708144 None:intergenic
TCAGAGGTAAGAGATTCCTC+AGG 0.606478 7:-27707872 None:intergenic
TCACATGTTGAAGAGGCCCT+AGG 0.608937 7:-27708637 None:intergenic
CTGGCCGAGACATCTATTGG+AGG 0.611802 7:-27705255 None:intergenic
GTCACTGATTCGATTCCTCA+AGG 0.612624 7:+27705303 MsG0780037524.01.T01:CDS
AGGTGTAATGAAAGGCATTG+TGG 0.618206 7:-27708469 None:intergenic
TGAAAACCTTCATCTCTATG+TGG 0.619909 7:+27707619 MsG0780037524.01.T01:CDS
ATTAACAGACGGACGCAGCA+TGG 0.622269 7:+27708404 MsG0780037524.01.T01:intron
ATATGGAGATACTGTTACTG+GGG 0.631733 7:-27707568 None:intergenic
ACAGATGGAGAAGAACGGAC+AGG 0.633517 7:-27705435 None:intergenic
TGGAAACAGATGGAGAAGAA+CGG 0.652354 7:-27705440 None:intergenic
TGAGGAATCTCTTACCTCTG+AGG 0.661442 7:+27707874 MsG0780037524.01.T01:CDS
AATATGAGATTATGGTGGCG+AGG 0.672434 7:+27708527 MsG0780037524.01.T01:CDS
CTTACAATATGAGATTATGG+TGG 0.678735 7:+27708522 MsG0780037524.01.T01:CDS
AAATCAACACTCAAAGTTGG+GGG 0.695322 7:-27706388 None:intergenic
CTCAACTTTGTGGTACCGCG+GGG 0.696072 7:+27707593 MsG0780037524.01.T01:CDS
AAAGCTCTTCCATTCCTCAG+AGG 0.706165 7:-27707888 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTCAAAATATTATTAAAAAA+AGG - Chr7:27706547-27706566 None:intergenic 10.0%
!! GAGAAAATAAAAAATTAATA+TGG + Chr7:27706942-27706961 MsG0780037524.01.T01:intron 10.0%
!!! ATTTTTTATTGTTAAAATCA+AGG + Chr7:27707029-27707048 MsG0780037524.01.T01:intron 10.0%
!!! TTTTAATAATATTTTGAGTT+TGG + Chr7:27706549-27706568 MsG0780037524.01.T01:intron 10.0%
!!! TTTTTTATTGTTAAAATCAA+GGG + Chr7:27707030-27707049 MsG0780037524.01.T01:intron 10.0%
!! AAATAAATTAAAACACGTAA+AGG - Chr7:27708374-27708393 None:intergenic 15.0%
!! GAAGTATAAAATTAAAATGT+TGG - Chr7:27705752-27705771 None:intergenic 15.0%
!! TAAAAAATTAATATGGGATA+AGG + Chr7:27706949-27706968 MsG0780037524.01.T01:intron 15.0%
!! TATAAAATTAAAATGTTGGA+CGG - Chr7:27705748-27705767 None:intergenic 15.0%
!!! ACAAAAAATCCTTTTTTTTT+TGG - Chr7:27706661-27706680 None:intergenic 15.0%
!!! AGATTTTATGTTATTTCTAA+AGG + Chr7:27707802-27707821 MsG0780037524.01.T01:CDS 15.0%
!!! ATAGAAAAATTTGTTTTGAT+TGG + Chr7:27706833-27706852 MsG0780037524.01.T01:intron 15.0%
!!! ATTTTATCAATAGTAATCAT+CGG - Chr7:27706052-27706071 None:intergenic 15.0%
!!! GATTTTATGTTATTTCTAAA+GGG + Chr7:27707803-27707822 MsG0780037524.01.T01:CDS 15.0%
!! AATGCTTATCCAAAAAAAAA+AGG + Chr7:27706649-27706668 MsG0780037524.01.T01:intron 20.0%
!! ATAAAATTAAAATGTTGGAC+GGG - Chr7:27705747-27705766 None:intergenic 20.0%
!! TACTTACTATAGAATTGAAT+TGG + Chr7:27708025-27708044 MsG0780037524.01.T01:intron 20.0%
!! TTATTCATTAAATTTGCGTT+AGG + Chr7:27708270-27708289 MsG0780037524.01.T01:intron 20.0%
!!! AAAATACTAATGGGTAATTT+TGG - Chr7:27707659-27707678 None:intergenic 20.0%
!!! AAATTCTTTAAAGTAACTCT+AGG - Chr7:27705989-27706008 None:intergenic 20.0%
!!! AGTCAAAATTGTGTTTTTAT+CGG + Chr7:27706734-27706753 MsG0780037524.01.T01:intron 20.0%
!!! GATAATTTTCTTTCTATTTC+AGG - Chr7:27708610-27708629 None:intergenic 20.0%
!!! TTTTATACTTCAACATGATT+TGG + Chr7:27705761-27705780 MsG0780037524.01.T01:intron 20.0%
! AAAATTATCCTCATTTCCTA+GGG + Chr7:27708621-27708640 MsG0780037524.01.T01:CDS 25.0%
! AAATTTATCAACTGACATGT+TGG - Chr7:27708316-27708335 None:intergenic 25.0%
! AAGAAATTTGAGAAGAAACT+AGG - Chr7:27707112-27707131 None:intergenic 25.0%
! AATACTCTTCCAATATCAAT+CGG - Chr7:27706077-27706096 None:intergenic 25.0%
! AATGCTATACAAATAACAGT+AGG - Chr7:27706178-27706197 None:intergenic 25.0%
! AGATATTATCCTTAACAAAC+CGG - Chr7:27708239-27708258 None:intergenic 25.0%
! ATAAAATTCCCGATTGATAT+TGG + Chr7:27706065-27706084 MsG0780037524.01.T01:intron 25.0%
! CTGCATGTTAAAATACTAAT+GGG - Chr7:27707668-27707687 None:intergenic 25.0%
! GCACAAACAAATTATGAAAA+AGG + Chr7:27705857-27705876 MsG0780037524.01.T01:intron 25.0%
! TAAAATTAAAATGTTGGACG+GGG - Chr7:27705746-27705765 None:intergenic 25.0%
! TAACATAAAATCTCGAAGTT+CGG - Chr7:27707795-27707814 None:intergenic 25.0%
! TAGAGATGACAATGAAAAAT+GGG + Chr7:27708429-27708448 MsG0780037524.01.T01:CDS 25.0%
! TCCAGTAGAAAAAATTCATT+GGG - Chr7:27705940-27705959 None:intergenic 25.0%
! TCTTACAAACAATGAAAATC+TGG + Chr7:27708572-27708591 MsG0780037524.01.T01:CDS 25.0%
! TTCCAGTAGAAAAAATTCAT+TGG - Chr7:27705941-27705960 None:intergenic 25.0%
! TTTGTCTTTGTACATATTCT+AGG + Chr7:27708079-27708098 MsG0780037524.01.T01:intron 25.0%
!! TACTGTTATTTGTATAGCAT+TGG + Chr7:27706177-27706196 MsG0780037524.01.T01:intron 25.0%
!! TGAAAATATTGCAAGTTTTG+AGG - Chr7:27708492-27708511 None:intergenic 25.0%
!! TGCAATATTTTCAACTTCTT+AGG + Chr7:27708499-27708518 MsG0780037524.01.T01:CDS 25.0%
!! TTTTGTGCATTATTAACAGA+CGG + Chr7:27708393-27708412 MsG0780037524.01.T01:intron 25.0%
!! TTTTTCTACTGGAATATTAG+AGG + Chr7:27705947-27705966 MsG0780037524.01.T01:intron 25.0%
!!! ACAATCAACTTGTTATATTG+TGG + Chr7:27706213-27706232 MsG0780037524.01.T01:intron 25.0%
!!! ATTGATATTGGAAGAGTATT+GGG + Chr7:27706077-27706096 MsG0780037524.01.T01:intron 25.0%
!!! TTTGAGTGTTGATTTCTTTA+GGG + Chr7:27706396-27706415 MsG0780037524.01.T01:CDS 25.0%
!!! TTTTTGGAAAATAAGGTGTT+AGG + Chr7:27707055-27707074 MsG0780037524.01.T01:intron 25.0%
AACATAAAATCTCGAAGTTC+GGG - Chr7:27707794-27707813 None:intergenic 30.0%
AAGAAATCAACACTCAAAGT+TGG - Chr7:27706394-27706413 None:intergenic 30.0%
AAGGAGAAAATATGTACAAG+AGG - Chr7:27706528-27706547 None:intergenic 30.0%
AATCAAACTCTCATCAATTG+TGG - Chr7:27705695-27705714 None:intergenic 30.0%
ACTCATAGATTAGGAATCAA+TGG - Chr7:27706133-27706152 None:intergenic 30.0%
ACTTCAATAACAGATGGATA+GGG + Chr7:27707420-27707439 MsG0780037524.01.T01:intron 30.0%
AGAAATCAACACTCAAAGTT+GGG - Chr7:27706393-27706412 None:intergenic 30.0%
AGGAGAAAATATGTACAAGA+GGG - Chr7:27706527-27706546 None:intergenic 30.0%
AGGCTTACAATATGAGATTA+TGG + Chr7:27708519-27708538 MsG0780037524.01.T01:CDS 30.0%
ATACTCTTCCAATATCAATC+GGG - Chr7:27706076-27706095 None:intergenic 30.0%
ATGAAAAAGGAACTTCTTGA+TGG + Chr7:27705870-27705889 MsG0780037524.01.T01:intron 30.0%
CAAACAATGAAAATCTGGAA+TGG + Chr7:27708577-27708596 MsG0780037524.01.T01:CDS 30.0%
CCTGCATGTTAAAATACTAA+TGG - Chr7:27707669-27707688 None:intergenic 30.0%
CTAGAGATGACAATGAAAAA+TGG + Chr7:27708428-27708447 MsG0780037524.01.T01:CDS 30.0%
CTGGTCAAATTATGAAAAGT+AGG - Chr7:27708128-27708147 None:intergenic 30.0%
CTTAAATAACTTGATCCAAG+CGG + Chr7:27707913-27707932 MsG0780037524.01.T01:CDS 30.0%
CTTACAATATGAGATTATGG+TGG + Chr7:27708522-27708541 MsG0780037524.01.T01:CDS 30.0%
GAAAAAATAACAGCAGACTA+AGG - Chr7:27706451-27706470 None:intergenic 30.0%
GAAAAAATTCATTGGGTAGT+TGG - Chr7:27705933-27705952 None:intergenic 30.0%
GAAAATTATCCTCATTTCCT+AGG + Chr7:27708620-27708639 MsG0780037524.01.T01:CDS 30.0%
GACTAAGGCTATCTATAATT+AGG - Chr7:27706436-27706455 None:intergenic 30.0%
GTTGATCTTACACATATTCA+GGG + Chr7:27706280-27706299 MsG0780037524.01.T01:intron 30.0%
TACTTCAATAACAGATGGAT+AGG + Chr7:27707419-27707438 MsG0780037524.01.T01:intron 30.0%
TACTTCTCGTAGATATAGTT+TGG + Chr7:27708157-27708176 MsG0780037524.01.T01:CDS 30.0%
TATATGTGAGCAAATTCTCA+AGG - Chr7:27707838-27707857 None:intergenic 30.0%
TCAAAACTCTTCATTTGGAA+CGG + Chr7:27707759-27707778 MsG0780037524.01.T01:CDS 30.0%
TTCTCTCAAAACTCTTCATT+TGG + Chr7:27707754-27707773 MsG0780037524.01.T01:CDS 30.0%
! CATTTTTCATTGTCATCTCT+AGG - Chr7:27708430-27708449 None:intergenic 30.0%
! GATTGATATTGGAAGAGTAT+TGG + Chr7:27706076-27706095 MsG0780037524.01.T01:intron 30.0%
! TACTGGAATATTAGAGGTAT+TGG + Chr7:27705953-27705972 MsG0780037524.01.T01:intron 30.0%
! TAGCTTTCTTTCTTGTTTCA+AGG + Chr7:27706485-27706504 MsG0780037524.01.T01:intron 30.0%
! TGTTATTTGTATAGCATTGG+AGG + Chr7:27706180-27706199 MsG0780037524.01.T01:intron 30.0%
! TTCAACATGATTTGGATCTT+TGG + Chr7:27705769-27705788 MsG0780037524.01.T01:intron 30.0%
!! ACAAGTTCTGAATTTGTCAA+AGG - Chr7:27705664-27705683 None:intergenic 30.0%
!! CTACTTTTCATAATTTGACC+AGG + Chr7:27708126-27708145 MsG0780037524.01.T01:CDS 30.0%
!! CTTTCTTGTTTCAAGGTTTT+TGG + Chr7:27706492-27706511 MsG0780037524.01.T01:intron 30.0%
!! CTTTGAGTGTTGATTTCTTT+AGG + Chr7:27706395-27706414 MsG0780037524.01.T01:CDS 30.0%
!! TTGATATTGGAAGAGTATTG+GGG + Chr7:27706078-27706097 MsG0780037524.01.T01:intron 30.0%
!!! AAATGAAGAGTTTTGAGAGA+AGG - Chr7:27707755-27707774 None:intergenic 30.0%
!!! AACTGACATGTTGGTTTTAT+AGG - Chr7:27708307-27708326 None:intergenic 30.0%
!!! AAGGGTGTTTTTGGAAAATA+AGG + Chr7:27707048-27707067 MsG0780037524.01.T01:intron 30.0%
!!! AAGTTTTGAGGTGTAATGAA+AGG - Chr7:27708480-27708499 None:intergenic 30.0%
!!! ACCCAATGAATTTTTTCTAC+TGG + Chr7:27705936-27705955 MsG0780037524.01.T01:intron 30.0%
!!! ACTGACATGTTGGTTTTATA+GGG - Chr7:27708306-27708325 None:intergenic 30.0%
!!! CCATTAGTATTTTAACATGC+AGG + Chr7:27707666-27707685 MsG0780037524.01.T01:CDS 30.0%
!!! GTTAAAATCAAGGGTGTTTT+TGG + Chr7:27707039-27707058 MsG0780037524.01.T01:intron 30.0%
AAATCAACACTCAAAGTTGG+GGG - Chr7:27706391-27706410 None:intergenic 35.0%
ACATTGCTAACTGCTTTCAA+TGG - Chr7:27707965-27707984 None:intergenic 35.0%
AGAAAATATGTACAAGAGGG+AGG - Chr7:27706524-27706543 None:intergenic 35.0%
ATATGGAGATACTGTTACTG+GGG - Chr7:27707571-27707590 None:intergenic 35.0%
ATCAACCCATAAATTCTGAC+GGG - Chr7:27706266-27706285 None:intergenic 35.0%
ATTGTTGAGTGCAAACCAAA+AGG - Chr7:27705283-27705302 None:intergenic 35.0%
CAACAATATCAATATCCGCT+TGG - Chr7:27707931-27707950 None:intergenic 35.0%
CAAGCGGATATTGATATTGT+TGG + Chr7:27707929-27707948 MsG0780037524.01.T01:CDS 35.0%
CATATGGAGATACTGTTACT+GGG - Chr7:27707572-27707591 None:intergenic 35.0%
CTCTCTACTTCAATAACAGA+TGG + Chr7:27707414-27707433 MsG0780037524.01.T01:intron 35.0%
CTGTTATTGAAGTAGAGAGT+GGG - Chr7:27707413-27707432 None:intergenic 35.0%
CTTCAATAACAGATGGATAG+GGG + Chr7:27707421-27707440 MsG0780037524.01.T01:intron 35.0%
GAAATCAACACTCAAAGTTG+GGG - Chr7:27706392-27706411 None:intergenic 35.0%
GATCAACCCATAAATTCTGA+CGG - Chr7:27706267-27706286 None:intergenic 35.0%
GGAGACTTTAATGTTGTGTT+TGG + Chr7:27706331-27706350 MsG0780037524.01.T01:CDS 35.0%
GGTTGATCTTACACATATTC+AGG + Chr7:27706279-27706298 MsG0780037524.01.T01:intron 35.0%
GTATCAAATTGGGAAGCTAT+GGG - Chr7:27705724-27705743 None:intergenic 35.0%
TATAAGCTCACATGTTGAAG+AGG - Chr7:27708647-27708666 None:intergenic 35.0%
TATTAAGACTTTCCGTCTCA+AGG + Chr7:27707517-27707536 MsG0780037524.01.T01:CDS 35.0%
TCAAAAGCTTGACATTGATC+CGG + Chr7:27708217-27708236 MsG0780037524.01.T01:CDS 35.0%
TCACAACCATTCTTTCCAAA+CGG + Chr7:27707363-27707382 MsG0780037524.01.T01:intron 35.0%
TCAGCAGTAAAAAGTAACAG+AGG - Chr7:27706028-27706047 None:intergenic 35.0%
TCCTAATCTATGAGTGCTTT+GGG + Chr7:27706138-27706157 MsG0780037524.01.T01:intron 35.0%
TCTGTTATTGAAGTAGAGAG+TGG - Chr7:27707414-27707433 None:intergenic 35.0%
TGAAAACCTTCATCTCTATG+TGG + Chr7:27707619-27707638 MsG0780037524.01.T01:CDS 35.0%
TGCTCAATATTGGAAACAGA+TGG - Chr7:27705453-27705472 None:intergenic 35.0%
TTCCTAATCTATGAGTGCTT+TGG + Chr7:27706137-27706156 MsG0780037524.01.T01:intron 35.0%
TTCTTCGTCAAAACTGTGAA+GGG - Chr7:27705837-27705856 None:intergenic 35.0%
TTGAGACGGAAAGTCTTAAT+AGG - Chr7:27707518-27707537 None:intergenic 35.0%
! ACAATGAAAATCTGGAATGG+TGG + Chr7:27708580-27708599 MsG0780037524.01.T01:CDS 35.0%
! CACTTTTCAATATGTCGTAG+TGG + Chr7:27705179-27705198 MsG0780037524.01.T01:CDS 35.0%
! CTTGATTTTCACTTCTTCGT+CGG + Chr7:27707225-27707244 MsG0780037524.01.T01:intron 35.0%
! TTTTCATAATTTGACCAGGC+TGG + Chr7:27708130-27708149 MsG0780037524.01.T01:CDS 35.0%
!! TCTGAGCTTTGAATTTGATC+AGG + Chr7:27707991-27708010 MsG0780037524.01.T01:CDS 35.0%
!!! ATGTCAAGCTTTTGAAGCTT+AGG - Chr7:27708212-27708231 None:intergenic 35.0%
!!! CAAGCTTTTTGGTTTCTGTA+TGG + Chr7:27707703-27707722 MsG0780037524.01.T01:CDS 35.0%
!!! CTTGTTGTTCTCAAGCTTTT+TGG + Chr7:27707692-27707711 MsG0780037524.01.T01:CDS 35.0%
!!! TGACGTGCATGTTTTTTAAG+AGG + Chr7:27705383-27705402 MsG0780037524.01.T01:intron 35.0%
!!! TGCATGTTTTTTAAGAGGAG+AGG + Chr7:27705388-27705407 MsG0780037524.01.T01:intron 35.0%
!!! TGTCAAGCTTTTGAAGCTTA+GGG - Chr7:27708211-27708230 None:intergenic 35.0%
!!! TGTTTTTTAAGAGGAGAGGT+TGG + Chr7:27705392-27705411 MsG0780037524.01.T01:intron 35.0%
!!! TTTTGGATAAGCATTGAGAG+AGG - Chr7:27706644-27706663 None:intergenic 35.0%
AACAGTGCTTTGATTGTCTG+AGG - Chr7:27705523-27705542 None:intergenic 40.0%
AAGAGATTCCTCAGGATCAA+AGG - Chr7:27707867-27707886 None:intergenic 40.0%
AAGTCTCCCAAAAACAACCA+AGG - Chr7:27706319-27706338 None:intergenic 40.0%
ACAGTGCTTTGATTGTCTGA+GGG - Chr7:27705522-27705541 None:intergenic 40.0%
AGAGATTCCTCAGGATCAAA+GGG - Chr7:27707866-27707885 None:intergenic 40.0%
AGTCTCCCAAAAACAACCAA+GGG - Chr7:27706318-27706337 None:intergenic 40.0%
ATATGACAGAGAATCTCGTC+TGG - Chr7:27707311-27707330 None:intergenic 40.0%
ATCCGTCACCTAATCTAACA+CGG - Chr7:27705352-27705371 None:intergenic 40.0%
ATCTTACACATATTCAGGGC+AGG + Chr7:27706284-27706303 MsG0780037524.01.T01:intron 40.0%
ATTCATTGGGTAGTTGGAGA+AGG - Chr7:27705927-27705946 None:intergenic 40.0%
CACAAGATAGAGATTCTCCT+GGG + Chr7:27706575-27706594 MsG0780037524.01.T01:intron 40.0%
CACGTCAATGTGCTCAATAT+TGG - Chr7:27705463-27705482 None:intergenic 40.0%
CCAGTAACAGTATCTCCATA+TGG + Chr7:27707570-27707589 MsG0780037524.01.T01:CDS 40.0%
CCATATGGAGATACTGTTAC+TGG - Chr7:27707573-27707592 None:intergenic 40.0%
CCTAATCTATGAGTGCTTTG+GGG + Chr7:27706139-27706158 MsG0780037524.01.T01:intron 40.0%
CTGAATTTGTCAAAGGTTGC+TGG - Chr7:27705657-27705676 None:intergenic 40.0%
CTTCTTCGTCAAAACTGTGA+AGG - Chr7:27705838-27705857 None:intergenic 40.0%
CTTGTCCCGTCAGAATTTAT+GGG + Chr7:27706258-27706277 MsG0780037524.01.T01:intron 40.0%
GAGAGAGGACAAACATCAAA+AGG - Chr7:27706629-27706648 None:intergenic 40.0%
GCTGTTGTCAATATCAATGG+CGG + Chr7:27707247-27707266 MsG0780037524.01.T01:intron 40.0%
GGAAAGAAATCTTCACAGCA+AGG - Chr7:27708107-27708126 None:intergenic 40.0%
GGAAGTGACAAGAAACTCTT+CGG + Chr7:27705221-27705240 MsG0780037524.01.T01:CDS 40.0%
GGTATCAAATTGGGAAGCTA+TGG - Chr7:27705725-27705744 None:intergenic 40.0%
GGTTGTGACATTTGCTTGTT+TGG - Chr7:27707351-27707370 None:intergenic 40.0%
GTAACGATGAAACGAAGTGA+AGG - Chr7:27707199-27707218 None:intergenic 40.0%
TACCACAAAGTTGAGCCATA+TGG - Chr7:27707588-27707607 None:intergenic 40.0%
TCGGCTGTTGTCAATATCAA+TGG + Chr7:27707244-27707263 MsG0780037524.01.T01:intron 40.0%
TCTTGTCCCGTCAGAATTTA+TGG + Chr7:27706257-27706276 MsG0780037524.01.T01:intron 40.0%
TGGAAACAGATGGAGAAGAA+CGG - Chr7:27705443-27705462 None:intergenic 40.0%
TTCACCTCCAATAGATGTCT+CGG + Chr7:27705251-27705270 MsG0780037524.01.T01:CDS 40.0%
TTCGTAATCTCATCCAGTGT+GGG + Chr7:27708334-27708353 MsG0780037524.01.T01:intron 40.0%
TTCTGTCCACATAGAGATGA+AGG - Chr7:27707628-27707647 None:intergenic 40.0%
TTGGACATTGAGGTCTCAAA+GGG + Chr7:27705411-27705430 MsG0780037524.01.T01:CDS 40.0%
TTTCCACCGTTTGGAAAGAA+TGG - Chr7:27707372-27707391 None:intergenic 40.0%
TTTCGTAATCTCATCCAGTG+TGG + Chr7:27708333-27708352 MsG0780037524.01.T01:intron 40.0%
! AATATGAGATTATGGTGGCG+AGG + Chr7:27708527-27708546 MsG0780037524.01.T01:CDS 40.0%
! AATCTCTTACCTCTGAGGAA+TGG + Chr7:27707879-27707898 MsG0780037524.01.T01:CDS 40.0%
! ACTTGCTGCCAAATCATCTA+CGG - Chr7:27705573-27705592 None:intergenic 40.0%
! AGAGTTTCTTGTCACTTCCA+TGG - Chr7:27705220-27705239 None:intergenic 40.0%
! CTCTTCATTTGGAACGGTTT+CGG + Chr7:27707765-27707784 MsG0780037524.01.T01:CDS 40.0%
! GATTTCTTTAGGGACAGATG+TGG + Chr7:27706406-27706425 MsG0780037524.01.T01:CDS 40.0%
! TAATAGGAAGTGCAGCATCT+CGG - Chr7:27707502-27707521 None:intergenic 40.0%
! TTTGGTTTCTGTATGGACGA+GGG + Chr7:27707710-27707729 MsG0780037524.01.T01:CDS 40.0%
!! AGGTGTAATGAAAGGCATTG+TGG - Chr7:27708472-27708491 None:intergenic 40.0%
!! GACATTGATCCGGTTTGTTA+AGG + Chr7:27708227-27708246 MsG0780037524.01.T01:intron 40.0%
!! TGAAGACACTTTTGTTTCCC+TGG + Chr7:27705485-27705504 MsG0780037524.01.T01:CDS 40.0%
!!! TTTTGGTTTCTGTATGGACG+AGG + Chr7:27707709-27707728 MsG0780037524.01.T01:CDS 40.0%
AAAGCTCTTCCATTCCTCAG+AGG - Chr7:27707891-27707910 None:intergenic 45.0%
AACCATATAGCGCCTTGAGA+CGG - Chr7:27707532-27707551 None:intergenic 45.0%
AATCATCTACGGTATCAGCC+AGG - Chr7:27705562-27705581 None:intergenic 45.0%
AATCTAACACGGCTATGGCT+GGG - Chr7:27705341-27705360 None:intergenic 45.0%
AGCCATAGCCGTGTTAGATT+AGG + Chr7:27705341-27705360 MsG0780037524.01.T01:intron 45.0%
AGCCGTGTTAGATTAGGTGA+CGG + Chr7:27705347-27705366 MsG0780037524.01.T01:intron 45.0%
CAACCATTCTTTCCAAACGG+TGG + Chr7:27707366-27707385 MsG0780037524.01.T01:intron 45.0%
CAATAACAGATGGATAGGGG+CGG + Chr7:27707424-27707443 MsG0780037524.01.T01:intron 45.0%
CACCTAATCTAACACGGCTA+TGG - Chr7:27705346-27705365 None:intergenic 45.0%
CATCTCTATGTGGACAGAAC+AGG + Chr7:27707629-27707648 MsG0780037524.01.T01:CDS 45.0%
CTCCATATGGCTCAACTTTG+TGG + Chr7:27707583-27707602 MsG0780037524.01.T01:CDS 45.0%
GCACAAGATAGAGATTCTCC+TGG + Chr7:27706574-27706593 MsG0780037524.01.T01:intron 45.0%
GCACAGAGATCAGAATCTGA+GGG - Chr7:27707137-27707156 None:intergenic 45.0%
GGCATTGTGGAACAACATCT+GGG - Chr7:27708459-27708478 None:intergenic 45.0%
GGCTGATACCGTAGATGATT+TGG + Chr7:27705562-27705581 MsG0780037524.01.T01:intron 45.0%
GTGCTCATGAGGGTTATGTT+TGG + Chr7:27706353-27706372 MsG0780037524.01.T01:CDS 45.0%
GTGTGTTAAAAGTCCCACAC+TGG - Chr7:27708350-27708369 None:intergenic 45.0%
GTTGGACATTGAGGTCTCAA+AGG + Chr7:27705410-27705429 MsG0780037524.01.T01:CDS 45.0%
TAATCTAACACGGCTATGGC+TGG - Chr7:27705342-27705361 None:intergenic 45.0%
TAATGTGCCCTTTGATCCTG+AGG + Chr7:27707856-27707875 MsG0780037524.01.T01:CDS 45.0%
TATGTACAAGAGGGAGGACT+AGG - Chr7:27706518-27706537 None:intergenic 45.0%
TCAGAGGTAAGAGATTCCTC+AGG - Chr7:27707875-27707894 None:intergenic 45.0%
TGAGGAATCTCTTACCTCTG+AGG + Chr7:27707874-27707893 MsG0780037524.01.T01:CDS 45.0%
TGCACAGAGATCAGAATCTG+AGG - Chr7:27707138-27707157 None:intergenic 45.0%
TGTCAAAGGTTGCTGGATAG+AGG - Chr7:27705650-27705669 None:intergenic 45.0%
TTCGTCAAAACTGTGAAGGG+AGG - Chr7:27705834-27705853 None:intergenic 45.0%
TTGAACCTGTTATCACTGCC+TGG + Chr7:27705541-27705560 MsG0780037524.01.T01:intron 45.0%
! AATAGGAAGTGCAGCATCTC+GGG - Chr7:27707501-27707520 None:intergenic 45.0%
! AGATGATTTGGCAGCAAGTC+AGG + Chr7:27705574-27705593 MsG0780037524.01.T01:intron 45.0%
! AGGCATTGTGGAACAACATC+TGG - Chr7:27708460-27708479 None:intergenic 45.0%
! CCCCAAAGCACTCATAGATT+AGG - Chr7:27706142-27706161 None:intergenic 45.0%
! GATGATTTGGCAGCAAGTCA+GGG + Chr7:27705575-27705594 MsG0780037524.01.T01:intron 45.0%
! GTTGGACGGGGTATCAAATT+GGG - Chr7:27705734-27705753 None:intergenic 45.0%
! TATGGACGAGGGTTTTTCGT+CGG + Chr7:27707721-27707740 MsG0780037524.01.T01:CDS 45.0%
! TGTTGGACGGGGTATCAAAT+TGG - Chr7:27705735-27705754 None:intergenic 45.0%
!! AATATCAATGGCGGATGAGG+AGG + Chr7:27707256-27707275 MsG0780037524.01.T01:intron 45.0%
!! GTCAATATCAATGGCGGATG+AGG + Chr7:27707253-27707272 MsG0780037524.01.T01:intron 45.0%
!! GTCACTGATTCGATTCCTCA+AGG + Chr7:27705303-27705322 MsG0780037524.01.T01:CDS 45.0%
!! GTTGTGTTTGGTGCTCATGA+GGG + Chr7:27706343-27706362 MsG0780037524.01.T01:CDS 45.0%
!! TGAGGGTATCACTTGAACCA+GGG - Chr7:27705505-27705524 None:intergenic 45.0%
!! TGTTGTGTTTGGTGCTCATG+AGG + Chr7:27706342-27706361 MsG0780037524.01.T01:CDS 45.0%
!!! CACGACCCTTGGTTGTTTTT+GGG + Chr7:27706310-27706329 MsG0780037524.01.T01:CDS 45.0%
!! AGAAAATAAAAAATTAATAT+GGG + Chr7:27706943-27706962 MsG0780037524.01.T01:intron 5.0%
AAGTGAAGGACGTAGAGTCG+TGG - Chr7:27707185-27707204 None:intergenic 50.0%
ACAGATGGAGAAGAACGGAC+AGG - Chr7:27705438-27705457 None:intergenic 50.0%
ACGAGAAGTAAACTCCAGCC+TGG - Chr7:27708147-27708166 None:intergenic 50.0%
AGAGGAGAGGTTGGACATTG+AGG + Chr7:27705401-27705420 MsG0780037524.01.T01:intron 50.0%
ATCAGCCAGGCAGTGATAAC+AGG - Chr7:27705549-27705568 None:intergenic 50.0%
ATTAACAGACGGACGCAGCA+TGG + Chr7:27708404-27708423 MsG0780037524.01.T01:intron 50.0%
CCAAAAACAACCAAGGGTCG+TGG - Chr7:27706312-27706331 None:intergenic 50.0%
CCAAACGGTGGAAACATCTC+TGG + Chr7:27707378-27707397 MsG0780037524.01.T01:intron 50.0%
CCAGAGATGTTTCCACCGTT+TGG - Chr7:27707381-27707400 None:intergenic 50.0%
GTGCATATACTTCGTCTCGC+TGG + Chr7:27707153-27707172 MsG0780037524.01.T01:intron 50.0%
TCACATGTTGAAGAGGCCCT+AGG - Chr7:27708640-27708659 None:intergenic 50.0%
TGAAGAGGCCCTAGGAAATG+AGG - Chr7:27708632-27708651 None:intergenic 50.0%
TGCCAACCTAGTTGGGATGT+CGG + Chr7:27706598-27706617 MsG0780037524.01.T01:intron 50.0%
TTACTGGGGCAGTGATGTTC+AGG - Chr7:27707557-27707576 None:intergenic 50.0%
! GAGTGCAAACCAAAAGGTGC+TGG - Chr7:27705277-27705296 None:intergenic 50.0%
! TGAAGGTTTTCAACACCCCG+CGG - Chr7:27707611-27707630 None:intergenic 50.0%
! TTCCGTCTCAAGGCGCTATA+TGG + Chr7:27707527-27707546 MsG0780037524.01.T01:CDS 50.0%
!! CCACGACCCTTGGTTGTTTT+TGG + Chr7:27706309-27706328 MsG0780037524.01.T01:CDS 50.0%
!! CTGAGGGTATCACTTGAACC+AGG - Chr7:27705506-27705525 None:intergenic 50.0%
!!! GCTTTTGAAGCTTAGGGCAG+TGG - Chr7:27708205-27708224 None:intergenic 50.0%
CACCGACATCCCAACTAGGT+TGG - Chr7:27706603-27706622 None:intergenic 55.0%
CCCCTAGAGCGGGTACTATA+CGG - Chr7:27705903-27705922 None:intergenic 55.0%
CCGTATAGTACCCGCTCTAG+GGG + Chr7:27705900-27705919 MsG0780037524.01.T01:intron 55.0%
CTCAACTTTGTGGTACCGCG+GGG + Chr7:27707593-27707612 MsG0780037524.01.T01:CDS 55.0%
CTGGCCGAGACATCTATTGG+AGG - Chr7:27705258-27705277 None:intergenic 55.0%
GCCGTATAGTACCCGCTCTA+GGG + Chr7:27705899-27705918 MsG0780037524.01.T01:intron 55.0%
GCTCAACTTTGTGGTACCGC+GGG + Chr7:27707592-27707611 MsG0780037524.01.T01:CDS 55.0%
GGATGAGGAGGAGAAGGAGA+AGG + Chr7:27707268-27707287 MsG0780037524.01.T01:intron 55.0%
GGCTCAACTTTGTGGTACCG+CGG + Chr7:27707591-27707610 MsG0780037524.01.T01:CDS 55.0%
TCCTGGGTGCCAACCTAGTT+GGG + Chr7:27706591-27706610 MsG0780037524.01.T01:intron 55.0%
TGCCGTATAGTACCCGCTCT+AGG + Chr7:27705898-27705917 MsG0780037524.01.T01:intron 55.0%
TTGGAGAAGGTCCCCTAGAG+CGG - Chr7:27705914-27705933 None:intergenic 55.0%
! ATGTCTCGGCCAGCACCTTT+TGG + Chr7:27705265-27705284 MsG0780037524.01.T01:CDS 55.0%
! GATGCACCGACATCCCAACT+AGG - Chr7:27706607-27706626 None:intergenic 55.0%
! GTGCTGGCCGAGACATCTAT+TGG - Chr7:27705261-27705280 None:intergenic 55.0%
!! AATGGCGGATGAGGAGGAGA+AGG + Chr7:27707262-27707281 MsG0780037524.01.T01:intron 55.0%
AACACGGCTATGGCTGGGCT+AGG - Chr7:27705336-27705355 None:intergenic 60.0%
ACTTCCATGGCTGCTGCTGG+CGG - Chr7:27705207-27705226 None:intergenic 60.0%
CTCCTGGGTGCCAACCTAGT+TGG + Chr7:27706590-27706609 MsG0780037524.01.T01:intron 60.0%
GCAGCAGCGGTTGCATCTGT+AGG - Chr7:27705619-27705638 None:intergenic 60.0%
GTCACTTCCATGGCTGCTGC+TGG - Chr7:27705210-27705229 None:intergenic 60.0%
TGGAGAAGGTCCCCTAGAGC+GGG - Chr7:27705913-27705932 None:intergenic 60.0%
! TCCCAACTAGGTTGGCACCC+AGG - Chr7:27706595-27706614 None:intergenic 60.0%
AGGGCAGGTACCACGACCCT+TGG + Chr7:27706299-27706318 MsG0780037524.01.T01:intron 65.0%
! AGAGGCGCAAGCTGCAGCAG+CGG - Chr7:27705632-27705651 None:intergenic 65.0%
GGGCTAGGCAGCGCACCTTG+AGG - Chr7:27705321-27705340 None:intergenic 70.0%
GGTTCCGCCAGCAGCAGCCA+TGG + Chr7:27705200-27705219 MsG0780037524.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 27705168 27708684 27705168 ID=MsG0780037524.01;Name=MsG0780037524.01
Chr7 mRNA 27705168 27708684 27705168 ID=MsG0780037524.01.T01;Parent=MsG0780037524.01;Name=MsG0780037524.01.T01;_AED=0.43;_eAED=0.43;_QI=0|0|0|0.66|1|1|6|0|440
Chr7 exon 27705168 27705324 27705168 ID=MsG0780037524.01.T01:exon:12807;Parent=MsG0780037524.01.T01
Chr7 exon 27705403 27705506 27705403 ID=MsG0780037524.01.T01:exon:12808;Parent=MsG0780037524.01.T01
Chr7 exon 27706301 27706427 27706301 ID=MsG0780037524.01.T01:exon:12809;Parent=MsG0780037524.01.T01
Chr7 exon 27707489 27708012 27707489 ID=MsG0780037524.01.T01:exon:12810;Parent=MsG0780037524.01.T01
Chr7 exon 27708101 27708238 27708101 ID=MsG0780037524.01.T01:exon:12811;Parent=MsG0780037524.01.T01
Chr7 exon 27708412 27708684 27708412 ID=MsG0780037524.01.T01:exon:12812;Parent=MsG0780037524.01.T01
Chr7 CDS 27705168 27705324 27705168 ID=MsG0780037524.01.T01:cds;Parent=MsG0780037524.01.T01
Chr7 CDS 27705403 27705506 27705403 ID=MsG0780037524.01.T01:cds;Parent=MsG0780037524.01.T01
Chr7 CDS 27706301 27706427 27706301 ID=MsG0780037524.01.T01:cds;Parent=MsG0780037524.01.T01
Chr7 CDS 27707489 27708012 27707489 ID=MsG0780037524.01.T01:cds;Parent=MsG0780037524.01.T01
Chr7 CDS 27708101 27708238 27708101 ID=MsG0780037524.01.T01:cds;Parent=MsG0780037524.01.T01
Chr7 CDS 27708412 27708684 27708412 ID=MsG0780037524.01.T01:cds;Parent=MsG0780037524.01.T01
Gene Sequence

>MsG0780037524.01.T01

ATGGGGCGTTACACTTTTCAATATGTCGTAGTGGTTCCGCCAGCAGCAGCCATGGAAGTGACAAGAAACTCTTCGGAAATTGTTTCACCTCCAATAGATGTCTCGGCCAGCACCTTTTGGTTTGCACTCAACAATGTCACTGATTCGATTCCTCAAGAGGAGAGGTTGGACATTGAGGTCTCAAAGGGACCTGTCCGTTCTTCTCCATCTGTTTCCAATATTGAGCACATTGACGTGCATGAAGACACTTTTGTTTCCCTGGGCAGGTACCACGACCCTTGGTTGTTTTTGGGAGACTTTAATGTTGTGTTTGGTGCTCATGAGGGTTATGTTTGGTTAACTGCTTTACCCCCAACTTTGAGTGTTGATTTCTTTAGGGACAGATGTGTTTTACTGTCCCGAGATGCTGCACTTCCTATTAAGACTTTCCGTCTCAAGGCGCTATATGGTTCTCCTGAACATCACTGCCCCAGTAACAGTATCTCCATATGGCTCAACTTTGTGGTACCGCGGGGTGTTGAAAACCTTCATCTCTATGTGGACAGAACAGGTTTACCAAAATTACCCATTAGTATTTTAACATGCAGGACGCTTGTTGTTCTCAAGCTTTTTGGTTTCTGTATGGACGAGGGTTTTTCGTCGGTTCTACTTCCTTCTCTCAAAACTCTTCATTTGGAACGGTTTCGGTTTCCCGAACTTCGAGATTTTATGTTATTTCTAAAGGGTTGCTCAATCCTTGAGAATTTGCTCACATATAATGTGCCCTTTGATCCTGAGGAATCTCTTACCTCTGAGGAATGGAAGAGCTTTTGCTTAAATAACTTGATCCAAGCGGATATTGATATTGTTGGTTCTTATTTTCCATTGAAAGCAGTTAGCAATGTACTCTCTCTGAGCTTTGAATTTGATCAGGATCCTTGCTGTGAAGATTTCTTTCCTACTTTTCATAATTTGACCAGGCTGGAGTTTACTTCTCGTAGATATAGTTTGGAATTCTTGATAGAAGTTCTCAACCACTGCCCTAAGCTTCAAAAGCTTGACATTGATCCGACGGACGCAGCATGGCCTAGAGATGACAATGAAAAATGGGTAGACCCAGATGTTGTTCCACAATGCCTTTCATTACACCTCAAAACTTGCAATATTTTCAACTTCTTAGGCTTACAATATGAGATTATGGTGGCGAGGTATATTTTGAAGAATGCAATAGTCTTACAAACAATGAAAATCTGGAATGGTGGACAACCTGAAATAGAAAGAAAATTATCCTCATTTCCTAGGGCCTCTTCAACATGTGAGCTTATAGTTTATGATGATTCATGA
Protein sequence

>MsG0780037524.01.T01

MGRYTFQYVVVVPPAAAMEVTRNSSEIVSPPIDVSASTFWFALNNVTDSIPQEERLDIEVSKGPVRSSPSVSNIEHIDVHEDTFVSLGRYHDPWLFLGDFNVVFGAHEGYVWLTALPPTLSVDFFRDRCVLLSRDAALPIKTFRLKALYGSPEHHCPSNSISIWLNFVVPRGVENLHLYVDRTGLPKLPISILTCRTLVVLKLFGFCMDEGFSSVLLPSLKTLHLERFRFPELRDFMLFLKGCSILENLLTYNVPFDPEESLTSEEWKSFCLNNLIQADIDIVGSYFPLKAVSNVLSLSFEFDQDPCCEDFFPTFHNLTRLEFTSRRYSLEFLIEVLNHCPKLQKLDIDPTDAAWPRDDNEKWVDPDVVPQCLSLHLKTCNIFNFLGLQYEIMVARYILKNAIVLQTMKIWNGGQPEIERKLSSFPRASSTCELIVYDDS*