Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780037557.01.T01 | GAU25872.1 | 61.702 | 329 | 119 | 5 | 1 | 329 | 23 | 344 | 4.09E-133 | 393 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780037557.01.T01 | Q8H1R7 | 27.568 | 370 | 205 | 10 | 4 | 329 | 22 | 372 | 8.53E-24 | 103 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780037557.01.T01 | A0A2Z6MKT8 | 61.702 | 329 | 119 | 5 | 1 | 329 | 23 | 344 | 1.96e-133 | 393 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780037557.01.T01 | MTR_3g107100 | 46.224 | 331 | 159 | 7 | 1 | 329 | 28 | 341 | 1.34e-80 | 251 |
MsG0780037557.01.T01 | MTR_2g007450 | 43.417 | 357 | 162 | 12 | 1 | 329 | 33 | 377 | 2.81e-73 | 233 |
MsG0780037557.01.T01 | MTR_3g107160 | 43.731 | 327 | 170 | 7 | 3 | 329 | 29 | 341 | 3.90e-72 | 228 |
MsG0780037557.01.T01 | MTR_3g107120 | 44.248 | 339 | 156 | 9 | 3 | 327 | 28 | 347 | 9.78e-71 | 225 |
MsG0780037557.01.T01 | MTR_1g053025 | 40.634 | 347 | 168 | 13 | 1 | 329 | 20 | 346 | 1.85e-62 | 203 |
MsG0780037557.01.T01 | MTR_2g007400 | 40.708 | 339 | 178 | 12 | 4 | 329 | 32 | 360 | 1.52e-59 | 196 |
MsG0780037557.01.T01 | MTR_3g026920 | 39.726 | 365 | 150 | 15 | 1 | 329 | 36 | 366 | 6.15e-55 | 184 |
MsG0780037557.01.T01 | MTR_2g008320 | 38.279 | 337 | 175 | 10 | 3 | 329 | 71 | 384 | 3.13e-51 | 176 |
MsG0780037557.01.T01 | MTR_1g107385 | 38.000 | 350 | 174 | 14 | 3 | 329 | 51 | 380 | 6.06e-51 | 174 |
MsG0780037557.01.T01 | MTR_5g083890 | 38.329 | 347 | 182 | 12 | 3 | 329 | 25 | 359 | 1.67e-50 | 175 |
MsG0780037557.01.T01 | MTR_4g098590 | 38.529 | 340 | 182 | 11 | 1 | 329 | 16 | 339 | 4.97e-50 | 171 |
MsG0780037557.01.T01 | MTR_7g075820 | 36.311 | 347 | 181 | 11 | 3 | 329 | 25 | 351 | 8.24e-50 | 171 |
MsG0780037557.01.T01 | MTR_2g007500 | 37.647 | 340 | 161 | 9 | 1 | 324 | 31 | 335 | 8.75e-49 | 166 |
MsG0780037557.01.T01 | MTR_2g005990 | 38.053 | 339 | 187 | 12 | 3 | 329 | 25 | 352 | 1.49e-48 | 167 |
MsG0780037557.01.T01 | MTR_2g008310 | 36.257 | 342 | 169 | 8 | 3 | 329 | 21 | 328 | 8.39e-48 | 166 |
MsG0780037557.01.T01 | MTR_2g007360 | 36.888 | 347 | 151 | 13 | 3 | 329 | 31 | 329 | 1.03e-45 | 159 |
MsG0780037557.01.T01 | MTR_1g041245 | 37.386 | 329 | 179 | 12 | 3 | 326 | 30 | 336 | 1.32e-45 | 159 |
MsG0780037557.01.T01 | MTR_3g099830 | 35.821 | 335 | 173 | 11 | 3 | 329 | 31 | 331 | 5.59e-45 | 157 |
MsG0780037557.01.T01 | MTR_7g083740 | 34.731 | 334 | 162 | 11 | 4 | 329 | 37 | 322 | 1.37e-42 | 151 |
MsG0780037557.01.T01 | MTR_5g073420 | 34.579 | 321 | 179 | 11 | 3 | 321 | 30 | 321 | 6.20e-42 | 150 |
MsG0780037557.01.T01 | MTR_7g007080 | 34.036 | 332 | 202 | 9 | 1 | 329 | 21 | 338 | 1.59e-40 | 146 |
MsG0780037557.01.T01 | MTR_7g033990 | 33.134 | 335 | 188 | 12 | 3 | 329 | 30 | 336 | 3.29e-38 | 140 |
MsG0780037557.01.T01 | MTR_7g032370 | 33.036 | 336 | 177 | 12 | 3 | 329 | 9 | 305 | 1.20e-37 | 137 |
MsG0780037557.01.T01 | MTR_7g033915 | 33.333 | 342 | 164 | 14 | 1 | 329 | 28 | 318 | 1.34e-37 | 138 |
MsG0780037557.01.T01 | MTR_7g056433 | 32.840 | 338 | 193 | 12 | 1 | 329 | 29 | 341 | 6.58e-37 | 136 |
MsG0780037557.01.T01 | MTR_5g058000 | 33.837 | 331 | 188 | 8 | 1 | 329 | 25 | 326 | 9.23e-37 | 135 |
MsG0780037557.01.T01 | MTR_7g032380 | 33.033 | 333 | 164 | 12 | 3 | 329 | 30 | 309 | 1.18e-36 | 135 |
MsG0780037557.01.T01 | MTR_7g098510 | 32.515 | 326 | 190 | 9 | 3 | 323 | 37 | 337 | 9.29e-36 | 133 |
MsG0780037557.01.T01 | MTR_7g034090 | 34.024 | 338 | 126 | 9 | 1 | 329 | 21 | 270 | 3.09e-35 | 132 |
MsG0780037557.01.T01 | MTR_7g115270 | 31.609 | 348 | 193 | 10 | 3 | 329 | 31 | 354 | 3.21e-35 | 132 |
MsG0780037557.01.T01 | MTR_2g007550 | 31.792 | 346 | 135 | 9 | 3 | 329 | 33 | 296 | 5.03e-35 | 130 |
MsG0780037557.01.T01 | MTR_7g098480 | 34.242 | 330 | 189 | 10 | 3 | 329 | 37 | 341 | 5.26e-35 | 133 |
MsG0780037557.01.T01 | MTR_3g108150 | 34.925 | 335 | 187 | 11 | 1 | 329 | 30 | 339 | 8.45e-35 | 130 |
MsG0780037557.01.T01 | MTR_4g039440 | 33.432 | 338 | 185 | 12 | 3 | 329 | 53 | 361 | 1.11e-34 | 131 |
MsG0780037557.01.T01 | MTR_7g056280 | 39.796 | 196 | 103 | 5 | 136 | 329 | 349 | 531 | 1.85e-34 | 132 |
MsG0780037557.01.T01 | MTR_7g056280 | 41.497 | 147 | 76 | 4 | 3 | 146 | 25 | 164 | 2.48e-22 | 98.2 |
MsG0780037557.01.T01 | MTR_7g026500 | 32.164 | 342 | 196 | 14 | 1 | 329 | 31 | 349 | 2.49e-34 | 130 |
MsG0780037557.01.T01 | MTR_7g098570 | 32.635 | 334 | 195 | 10 | 1 | 329 | 37 | 345 | 4.88e-34 | 130 |
MsG0780037557.01.T01 | MTR_7g007340 | 33.724 | 341 | 158 | 15 | 1 | 329 | 30 | 314 | 6.72e-34 | 128 |
MsG0780037557.01.T01 | MTR_5g058100 | 33.537 | 328 | 181 | 11 | 3 | 321 | 28 | 327 | 5.15e-33 | 126 |
MsG0780037557.01.T01 | MTR_7g088260 | 33.333 | 333 | 187 | 12 | 4 | 329 | 111 | 415 | 5.35e-33 | 127 |
MsG0780037557.01.T01 | MTR_3g082890 | 32.479 | 351 | 186 | 11 | 3 | 329 | 116 | 439 | 1.27e-32 | 126 |
MsG0780037557.01.T01 | MTR_3g036250 | 31.642 | 335 | 189 | 8 | 1 | 329 | 22 | 322 | 4.68e-32 | 123 |
MsG0780037557.01.T01 | MTR_3g108560 | 31.532 | 333 | 192 | 10 | 3 | 329 | 39 | 341 | 6.61e-32 | 123 |
MsG0780037557.01.T01 | MTR_0492s0020 | 33.234 | 334 | 178 | 13 | 4 | 329 | 106 | 402 | 2.28e-31 | 122 |
MsG0780037557.01.T01 | MTR_0543s0010 | 33.234 | 334 | 178 | 13 | 4 | 329 | 106 | 402 | 2.72e-31 | 122 |
MsG0780037557.01.T01 | MTR_1g108820 | 29.799 | 349 | 183 | 14 | 1 | 326 | 25 | 334 | 1.16e-30 | 119 |
MsG0780037557.01.T01 | MTR_6g045333 | 32.743 | 339 | 184 | 13 | 4 | 324 | 81 | 393 | 1.47e-30 | 120 |
MsG0780037557.01.T01 | MTR_3g040700 | 30.357 | 336 | 191 | 11 | 1 | 329 | 60 | 359 | 1.48e-30 | 120 |
MsG0780037557.01.T01 | MTR_1g085120 | 30.952 | 336 | 198 | 9 | 4 | 329 | 112 | 423 | 2.08e-30 | 120 |
MsG0780037557.01.T01 | MTR_7g034115 | 32.537 | 335 | 194 | 12 | 1 | 329 | 28 | 336 | 2.24e-30 | 119 |
MsG0780037557.01.T01 | MTR_1g066830 | 30.678 | 339 | 194 | 10 | 4 | 329 | 28 | 338 | 2.57e-30 | 119 |
MsG0780037557.01.T01 | MTR_1g085120 | 30.952 | 336 | 198 | 9 | 4 | 329 | 187 | 498 | 2.99e-30 | 120 |
MsG0780037557.01.T01 | MTR_5g012840 | 29.003 | 331 | 157 | 13 | 7 | 329 | 12 | 272 | 1.07e-29 | 115 |
MsG0780037557.01.T01 | MTR_0009s0080 | 32.738 | 336 | 195 | 12 | 4 | 329 | 38 | 352 | 1.64e-29 | 117 |
MsG0780037557.01.T01 | MTR_3g107140 | 43.784 | 185 | 83 | 7 | 15 | 189 | 23 | 196 | 4.47e-29 | 111 |
MsG0780037557.01.T01 | MTR_6g022500 | 30.462 | 325 | 196 | 8 | 3 | 321 | 120 | 420 | 5.31e-29 | 116 |
MsG0780037557.01.T01 | MTR_3g082890 | 30.130 | 385 | 191 | 14 | 1 | 329 | 34 | 396 | 6.22e-29 | 115 |
MsG0780037557.01.T01 | MTR_7g055943 | 33.134 | 335 | 190 | 12 | 3 | 329 | 59 | 367 | 8.46e-29 | 115 |
MsG0780037557.01.T01 | MTR_1089s0010 | 29.341 | 334 | 197 | 10 | 3 | 329 | 27 | 328 | 1.41e-28 | 114 |
MsG0780037557.01.T01 | MTR_7g034120 | 32.639 | 288 | 163 | 10 | 50 | 329 | 1 | 265 | 6.66e-28 | 110 |
MsG0780037557.01.T01 | MTR_3g105060 | 30.721 | 319 | 191 | 8 | 3 | 321 | 33 | 321 | 8.67e-28 | 111 |
MsG0780037557.01.T01 | MTR_5g045510 | 30.088 | 339 | 178 | 12 | 4 | 329 | 32 | 324 | 1.42e-27 | 111 |
MsG0780037557.01.T01 | MTR_6g040270 | 29.003 | 331 | 204 | 8 | 3 | 329 | 27 | 330 | 1.45e-27 | 111 |
MsG0780037557.01.T01 | MTR_5g073340 | 29.664 | 327 | 175 | 9 | 1 | 318 | 25 | 305 | 2.20e-27 | 109 |
MsG0780037557.01.T01 | MTR_5g007410 | 31.268 | 339 | 196 | 12 | 4 | 329 | 46 | 360 | 2.70e-27 | 111 |
MsG0780037557.01.T01 | MTR_6g011460 | 31.563 | 339 | 187 | 10 | 3 | 329 | 65 | 370 | 3.03e-27 | 110 |
MsG0780037557.01.T01 | MTR_2g007530 | 34.393 | 346 | 114 | 15 | 1 | 323 | 36 | 291 | 6.74e-27 | 108 |
MsG0780037557.01.T01 | MTR_5g061680 | 29.483 | 329 | 181 | 11 | 3 | 329 | 30 | 309 | 8.92e-27 | 108 |
MsG0780037557.01.T01 | MTR_5g073370 | 30.530 | 321 | 198 | 8 | 1 | 317 | 22 | 321 | 9.34e-27 | 108 |
MsG0780037557.01.T01 | MTR_3g071850 | 30.060 | 336 | 197 | 11 | 4 | 324 | 44 | 356 | 1.65e-26 | 110 |
MsG0780037557.01.T01 | MTR_3g106960 | 41.104 | 163 | 85 | 5 | 171 | 329 | 1 | 156 | 4.40e-26 | 104 |
MsG0780037557.01.T01 | MTR_2g036470 | 30.000 | 340 | 199 | 11 | 4 | 329 | 34 | 348 | 4.91e-26 | 107 |
MsG0780037557.01.T01 | MTR_5g045170 | 29.762 | 336 | 200 | 11 | 4 | 329 | 34 | 343 | 7.05e-26 | 106 |
MsG0780037557.01.T01 | MTR_7g056420 | 32.919 | 322 | 159 | 12 | 3 | 314 | 28 | 302 | 9.25e-26 | 108 |
MsG0780037557.01.T01 | MTR_7g056430 | 32.919 | 322 | 159 | 12 | 3 | 314 | 28 | 302 | 1.23e-25 | 108 |
MsG0780037557.01.T01 | MTR_5g013500 | 30.159 | 315 | 162 | 10 | 17 | 314 | 28 | 301 | 1.95e-25 | 105 |
MsG0780037557.01.T01 | MTR_7g034110 | 30.275 | 327 | 153 | 13 | 3 | 321 | 30 | 289 | 3.61e-25 | 103 |
MsG0780037557.01.T01 | MTR_3g023630 | 30.000 | 330 | 202 | 11 | 3 | 329 | 27 | 330 | 9.84e-25 | 103 |
MsG0780037557.01.T01 | MTR_5g008950 | 27.492 | 331 | 211 | 9 | 1 | 329 | 16 | 319 | 6.42e-24 | 101 |
MsG0780037557.01.T01 | MTR_3g467400 | 29.714 | 350 | 171 | 16 | 3 | 329 | 22 | 319 | 7.69e-24 | 100 |
MsG0780037557.01.T01 | MTR_8g085430 | 38.356 | 219 | 104 | 12 | 3 | 206 | 30 | 232 | 8.61e-23 | 97.4 |
MsG0780037557.01.T01 | MTR_3g108560 | 30.526 | 285 | 169 | 8 | 1 | 279 | 37 | 298 | 2.14e-22 | 95.9 |
MsG0780037557.01.T01 | MTR_1g108800 | 34.375 | 256 | 130 | 11 | 85 | 329 | 66 | 294 | 2.27e-22 | 96.3 |
MsG0780037557.01.T01 | MTR_7g007370 | 36.683 | 199 | 107 | 7 | 111 | 304 | 91 | 275 | 7.76e-22 | 94.7 |
MsG0780037557.01.T01 | MTR_5g054920 | 35.795 | 176 | 91 | 6 | 161 | 329 | 2 | 162 | 1.08e-21 | 91.3 |
MsG0780037557.01.T01 | MTR_1g085120 | 30.769 | 286 | 173 | 8 | 4 | 279 | 199 | 469 | 1.32e-21 | 95.5 |
MsG0780037557.01.T01 | MTR_6g022360 | 30.030 | 333 | 197 | 10 | 1 | 329 | 60 | 360 | 1.70e-21 | 94.7 |
MsG0780037557.01.T01 | MTR_7g075800 | 31.502 | 273 | 144 | 10 | 88 | 322 | 104 | 371 | 4.60e-21 | 94.4 |
MsG0780037557.01.T01 | MTR_1g108820 | 29.139 | 302 | 164 | 12 | 1 | 279 | 25 | 299 | 2.21e-20 | 90.9 |
MsG0780037557.01.T01 | MTR_7g056447 | 38.983 | 177 | 87 | 5 | 1 | 173 | 26 | 185 | 2.75e-20 | 89.7 |
MsG0780037557.01.T01 | MTR_7g056020 | 33.469 | 245 | 140 | 7 | 92 | 329 | 98 | 326 | 3.55e-20 | 91.7 |
MsG0780037557.01.T01 | MTR_7g021990 | 29.231 | 325 | 202 | 11 | 3 | 321 | 67 | 369 | 3.85e-20 | 90.9 |
MsG0780037557.01.T01 | MTR_7g021950 | 29.231 | 325 | 202 | 11 | 3 | 321 | 67 | 369 | 4.45e-20 | 91.3 |
MsG0780037557.01.T01 | MTR_7g114710 | 28.829 | 333 | 156 | 13 | 3 | 314 | 32 | 304 | 4.71e-20 | 90.1 |
MsG0780037557.01.T01 | MTR_7g056277 | 30.861 | 337 | 189 | 15 | 3 | 329 | 278 | 580 | 8.12e-20 | 90.5 |
MsG0780037557.01.T01 | MTR_5g008920 | 29.395 | 347 | 187 | 13 | 1 | 329 | 29 | 335 | 1.53e-19 | 89.0 |
MsG0780037557.01.T01 | MTR_7g056287 | 30.357 | 336 | 192 | 13 | 3 | 329 | 22 | 324 | 5.42e-19 | 87.0 |
MsG0780037557.01.T01 | MTR_6g022520 | 31.560 | 282 | 157 | 8 | 58 | 329 | 10 | 265 | 5.57e-19 | 86.3 |
MsG0780037557.01.T01 | MTR_7g033945 | 37.736 | 159 | 82 | 6 | 1 | 154 | 28 | 174 | 8.78e-19 | 82.8 |
MsG0780037557.01.T01 | MTR_3g087260 | 27.877 | 391 | 206 | 13 | 3 | 329 | 31 | 409 | 2.09e-18 | 85.9 |
MsG0780037557.01.T01 | MTR_5g084070 | 28.533 | 368 | 186 | 14 | 3 | 321 | 32 | 371 | 2.72e-18 | 85.5 |
MsG0780037557.01.T01 | MTR_5g031970 | 26.331 | 338 | 174 | 11 | 3 | 329 | 35 | 308 | 8.40e-18 | 83.6 |
MsG0780037557.01.T01 | MTR_1g492880 | 59.420 | 69 | 25 | 2 | 1 | 68 | 23 | 89 | 9.51e-18 | 77.8 |
MsG0780037557.01.T01 | MTR_1g492880 | 59.420 | 69 | 25 | 2 | 1 | 68 | 23 | 89 | 1.19e-17 | 77.8 |
MsG0780037557.01.T01 | MTR_4g134150 | 32.203 | 177 | 101 | 5 | 3 | 177 | 29 | 188 | 1.21e-17 | 80.9 |
MsG0780037557.01.T01 | MTR_3g110010 | 35.567 | 194 | 101 | 7 | 3 | 195 | 32 | 202 | 1.65e-17 | 84.0 |
MsG0780037557.01.T01 | MTR_3g109982 | 29.433 | 282 | 166 | 11 | 3 | 279 | 32 | 285 | 2.34e-17 | 83.6 |
MsG0780037557.01.T01 | MTR_3g109982 | 34.361 | 227 | 119 | 10 | 114 | 329 | 220 | 427 | 2.97e-17 | 83.2 |
MsG0780037557.01.T01 | MTR_6g044572 | 27.300 | 337 | 187 | 12 | 1 | 314 | 19 | 320 | 3.24e-17 | 82.0 |
MsG0780037557.01.T01 | MTR_2g007090 | 36.041 | 197 | 86 | 7 | 141 | 329 | 87 | 251 | 4.74e-17 | 80.5 |
MsG0780037557.01.T01 | MTR_5g039470 | 26.471 | 340 | 210 | 9 | 3 | 329 | 4 | 316 | 4.91e-17 | 80.9 |
MsG0780037557.01.T01 | MTR_3g095600 | 31.963 | 219 | 111 | 6 | 6 | 221 | 26 | 209 | 1.19e-16 | 79.3 |
MsG0780037557.01.T01 | MTR_6g044560 | 27.300 | 337 | 187 | 12 | 1 | 314 | 195 | 496 | 1.57e-16 | 80.9 |
MsG0780037557.01.T01 | MTR_6g029350 | 36.932 | 176 | 80 | 8 | 164 | 329 | 1 | 155 | 2.91e-15 | 74.3 |
MsG0780037557.01.T01 | MTR_3g450920 | 36.126 | 191 | 93 | 8 | 26 | 212 | 55 | 220 | 5.41e-15 | 73.6 |
MsG0780037557.01.T01 | MTR_7g022105 | 26.074 | 326 | 211 | 9 | 3 | 321 | 68 | 370 | 7.65e-15 | 75.1 |
MsG0780037557.01.T01 | MTR_5g076150 | 33.333 | 177 | 94 | 5 | 118 | 272 | 26 | 200 | 1.38e-14 | 72.4 |
MsG0780037557.01.T01 | MTR_3g094980 | 40.260 | 77 | 43 | 1 | 253 | 329 | 29 | 102 | 6.65e-14 | 69.3 |
MsG0780037557.01.T01 | MTR_3g114200 | 37.594 | 133 | 71 | 4 | 3 | 135 | 38 | 158 | 1.21e-13 | 68.2 |
MsG0780037557.01.T01 | MTR_5g039450 | 27.019 | 322 | 176 | 11 | 4 | 311 | 26 | 302 | 1.32e-13 | 71.2 |
MsG0780037557.01.T01 | MTR_2g020180 | 33.516 | 182 | 91 | 7 | 155 | 329 | 12 | 170 | 1.96e-13 | 68.9 |
MsG0780037557.01.T01 | MTR_2g007610 | 44.681 | 94 | 44 | 2 | 236 | 329 | 23 | 108 | 2.72e-13 | 67.4 |
MsG0780037557.01.T01 | MTR_1377s0010 | 33.621 | 116 | 67 | 2 | 214 | 329 | 7 | 112 | 7.45e-13 | 65.5 |
MsG0780037557.01.T01 | MTR_7g081290 | 36.735 | 98 | 49 | 3 | 238 | 329 | 123 | 213 | 5.98e-12 | 65.1 |
MsG0780037557.01.T01 | MTR_7g033940 | 34.483 | 116 | 55 | 3 | 1 | 111 | 111 | 210 | 6.68e-12 | 64.7 |
MsG0780037557.01.T01 | MTR_1g038710 | 26.185 | 401 | 200 | 15 | 1 | 329 | 36 | 412 | 8.33e-12 | 66.2 |
MsG0780037557.01.T01 | MTR_4g032730 | 25.743 | 404 | 201 | 19 | 3 | 326 | 34 | 418 | 9.31e-12 | 66.2 |
MsG0780037557.01.T01 | MTR_8g468810 | 25.191 | 393 | 189 | 16 | 3 | 321 | 44 | 405 | 1.75e-11 | 65.1 |
MsG0780037557.01.T01 | MTR_5g063950 | 27.554 | 323 | 171 | 14 | 22 | 329 | 40 | 314 | 2.51e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780037557.01.T01 | AT4G26340 | 27.568 | 370 | 205 | 10 | 4 | 329 | 22 | 372 | 8.70e-25 | 103 |
MsG0780037557.01.T01 | AT4G00160 | 28.177 | 362 | 189 | 11 | 1 | 313 | 33 | 372 | 4.27e-21 | 94.0 |
MsG0780037557.01.T01 | AT5G38590 | 26.923 | 364 | 197 | 12 | 3 | 321 | 21 | 360 | 7.45e-19 | 87.0 |
MsG0780037557.01.T01 | AT5G22720 | 32.105 | 190 | 104 | 6 | 1 | 183 | 40 | 211 | 1.09e-18 | 87.0 |
MsG0780037557.01.T01 | AT5G56370 | 27.957 | 372 | 200 | 14 | 1 | 329 | 19 | 365 | 1.42e-18 | 86.3 |
MsG0780037557.01.T01 | AT5G56370 | 27.957 | 372 | 200 | 14 | 1 | 329 | 19 | 365 | 1.42e-18 | 86.3 |
MsG0780037557.01.T01 | AT1G16930 | 31.217 | 189 | 112 | 6 | 1 | 188 | 32 | 203 | 1.45e-17 | 83.6 |
MsG0780037557.01.T01 | AT1G16930 | 31.217 | 189 | 112 | 6 | 1 | 188 | 32 | 203 | 1.45e-17 | 83.6 |
MsG0780037557.01.T01 | AT1G16930 | 31.217 | 189 | 112 | 6 | 1 | 188 | 32 | 203 | 1.45e-17 | 83.6 |
MsG0780037557.01.T01 | AT5G22730 | 30.811 | 185 | 108 | 4 | 4 | 184 | 48 | 216 | 4.06e-17 | 82.4 |
MsG0780037557.01.T01 | AT5G22730 | 30.811 | 185 | 108 | 4 | 4 | 184 | 48 | 216 | 4.06e-17 | 82.4 |
MsG0780037557.01.T01 | AT5G22730 | 30.811 | 185 | 108 | 4 | 4 | 184 | 48 | 216 | 4.21e-17 | 81.6 |
MsG0780037557.01.T01 | AT1G51370 | 31.148 | 183 | 105 | 6 | 1 | 182 | 36 | 198 | 5.10e-17 | 81.3 |
MsG0780037557.01.T01 | AT1G51370 | 31.148 | 183 | 105 | 6 | 1 | 182 | 36 | 198 | 8.41e-17 | 81.3 |
MsG0780037557.01.T01 | AT1G51370 | 31.148 | 183 | 105 | 6 | 1 | 182 | 36 | 198 | 9.57e-17 | 80.9 |
MsG0780037557.01.T01 | AT3G50710 | 27.809 | 356 | 194 | 12 | 3 | 311 | 21 | 360 | 1.00e-16 | 80.9 |
MsG0780037557.01.T01 | AT1G69630 | 27.799 | 259 | 161 | 6 | 1 | 247 | 35 | 279 | 1.72e-16 | 80.5 |
MsG0780037557.01.T01 | AT4G26350 | 26.234 | 385 | 192 | 15 | 3 | 324 | 21 | 376 | 3.14e-16 | 79.3 |
MsG0780037557.01.T01 | AT5G53840 | 31.604 | 212 | 117 | 8 | 1 | 210 | 35 | 220 | 3.78e-16 | 79.3 |
MsG0780037557.01.T01 | AT5G56370 | 28.882 | 322 | 164 | 13 | 1 | 279 | 19 | 318 | 6.75e-16 | 77.8 |
MsG0780037557.01.T01 | AT5G38590 | 31.915 | 188 | 113 | 4 | 3 | 189 | 21 | 194 | 6.82e-16 | 77.0 |
MsG0780037557.01.T01 | AT4G13985 | 31.492 | 181 | 109 | 6 | 1 | 175 | 36 | 207 | 1.08e-15 | 78.2 |
MsG0780037557.01.T01 | AT5G56820 | 26.099 | 364 | 196 | 15 | 1 | 321 | 32 | 365 | 1.09e-15 | 77.8 |
MsG0780037557.01.T01 | AT5G56420 | 26.203 | 374 | 209 | 12 | 1 | 329 | 23 | 374 | 2.19e-15 | 77.0 |
MsG0780037557.01.T01 | AT5G56420 | 26.203 | 374 | 209 | 12 | 1 | 329 | 23 | 374 | 2.19e-15 | 77.0 |
MsG0780037557.01.T01 | AT5G56420 | 26.203 | 374 | 209 | 12 | 1 | 329 | 23 | 374 | 2.19e-15 | 77.0 |
MsG0780037557.01.T01 | AT5G53635 | 28.977 | 176 | 113 | 5 | 4 | 179 | 20 | 183 | 2.65e-15 | 76.6 |
MsG0780037557.01.T01 | AT4G10400 | 26.184 | 359 | 201 | 10 | 3 | 321 | 21 | 355 | 2.65e-15 | 76.6 |
MsG0780037557.01.T01 | AT4G10400 | 26.184 | 359 | 201 | 10 | 3 | 321 | 21 | 355 | 2.65e-15 | 76.6 |
MsG0780037557.01.T01 | AT4G10400 | 26.184 | 359 | 201 | 10 | 3 | 321 | 21 | 355 | 2.65e-15 | 76.6 |
MsG0780037557.01.T01 | AT4G09920 | 33.846 | 195 | 108 | 6 | 3 | 196 | 21 | 195 | 3.43e-15 | 75.5 |
MsG0780037557.01.T01 | AT4G09920 | 33.846 | 195 | 108 | 6 | 3 | 196 | 21 | 195 | 3.43e-15 | 75.5 |
MsG0780037557.01.T01 | AT4G09920 | 33.846 | 195 | 108 | 6 | 3 | 196 | 21 | 195 | 3.49e-15 | 75.1 |
MsG0780037557.01.T01 | AT4G09920 | 33.846 | 195 | 108 | 6 | 3 | 196 | 21 | 195 | 3.49e-15 | 75.1 |
MsG0780037557.01.T01 | AT4G09920 | 33.846 | 195 | 108 | 6 | 3 | 196 | 21 | 195 | 3.49e-15 | 75.1 |
MsG0780037557.01.T01 | AT1G78840 | 28.529 | 340 | 156 | 12 | 1 | 276 | 23 | 339 | 3.89e-15 | 76.3 |
MsG0780037557.01.T01 | AT1G78840 | 28.529 | 340 | 156 | 12 | 1 | 276 | 23 | 339 | 3.89e-15 | 76.3 |
MsG0780037557.01.T01 | AT1G55660 | 33.333 | 177 | 107 | 5 | 1 | 175 | 70 | 237 | 4.49e-15 | 76.3 |
MsG0780037557.01.T01 | AT1G55660 | 33.333 | 177 | 107 | 5 | 1 | 175 | 70 | 237 | 5.26e-15 | 75.5 |
MsG0780037557.01.T01 | AT3G56780 | 31.492 | 181 | 105 | 6 | 1 | 179 | 24 | 187 | 5.97e-15 | 75.9 |
MsG0780037557.01.T01 | AT3G56780 | 30.939 | 181 | 106 | 5 | 1 | 179 | 24 | 187 | 6.17e-15 | 75.5 |
MsG0780037557.01.T01 | AT4G00315 | 33.523 | 176 | 104 | 6 | 3 | 175 | 21 | 186 | 6.95e-15 | 75.5 |
MsG0780037557.01.T01 | AT3G56780 | 30.939 | 181 | 106 | 5 | 1 | 179 | 24 | 187 | 8.11e-15 | 75.1 |
MsG0780037557.01.T01 | AT2G26860 | 27.467 | 375 | 196 | 16 | 1 | 320 | 19 | 372 | 9.08e-15 | 75.1 |
MsG0780037557.01.T01 | AT2G26860 | 27.467 | 375 | 196 | 16 | 1 | 320 | 19 | 372 | 9.08e-15 | 75.1 |
MsG0780037557.01.T01 | AT5G44490 | 30.168 | 179 | 104 | 6 | 3 | 175 | 36 | 199 | 1.34e-14 | 74.7 |
MsG0780037557.01.T01 | AT5G44490 | 30.168 | 179 | 104 | 6 | 3 | 175 | 36 | 199 | 1.77e-14 | 74.3 |
MsG0780037557.01.T01 | AT3G52680 | 26.923 | 364 | 189 | 15 | 1 | 313 | 38 | 375 | 2.05e-14 | 74.3 |
MsG0780037557.01.T01 | AT5G56380 | 33.645 | 214 | 113 | 8 | 1 | 203 | 19 | 214 | 4.17e-14 | 73.2 |
MsG0780037557.01.T01 | AT5G56380 | 33.645 | 214 | 113 | 8 | 1 | 203 | 19 | 214 | 4.17e-14 | 73.2 |
MsG0780037557.01.T01 | AT1G32375 | 24.543 | 383 | 209 | 13 | 1 | 329 | 19 | 375 | 4.61e-14 | 72.8 |
MsG0780037557.01.T01 | AT1G32375 | 24.543 | 383 | 209 | 13 | 1 | 329 | 19 | 375 | 4.61e-14 | 72.8 |
MsG0780037557.01.T01 | AT5G22670 | 33.526 | 173 | 100 | 5 | 3 | 175 | 30 | 187 | 5.76e-14 | 72.8 |
MsG0780037557.01.T01 | AT5G22700 | 27.244 | 312 | 178 | 12 | 3 | 285 | 62 | 353 | 1.02e-13 | 72.0 |
MsG0780037557.01.T01 | AT1G06630 | 26.197 | 355 | 189 | 14 | 1 | 295 | 29 | 370 | 1.32e-13 | 71.6 |
MsG0780037557.01.T01 | AT1G06630 | 26.197 | 355 | 189 | 14 | 1 | 295 | 29 | 370 | 1.32e-13 | 71.6 |
MsG0780037557.01.T01 | AT1G06630 | 26.197 | 355 | 189 | 14 | 1 | 295 | 29 | 370 | 1.32e-13 | 71.6 |
MsG0780037557.01.T01 | AT1G06630 | 26.197 | 355 | 189 | 14 | 1 | 295 | 29 | 370 | 1.32e-13 | 71.6 |
MsG0780037557.01.T01 | AT1G06630 | 26.197 | 355 | 189 | 14 | 1 | 295 | 38 | 379 | 1.59e-13 | 71.2 |
MsG0780037557.01.T01 | AT1G06630 | 26.197 | 355 | 189 | 14 | 1 | 295 | 29 | 370 | 1.93e-13 | 71.2 |
MsG0780037557.01.T01 | AT5G53640 | 28.090 | 178 | 101 | 6 | 3 | 175 | 41 | 196 | 2.05e-13 | 68.9 |
MsG0780037557.01.T01 | AT1G26890 | 37.748 | 151 | 75 | 5 | 3 | 152 | 57 | 189 | 3.78e-13 | 69.3 |
MsG0780037557.01.T01 | AT1G26890 | 37.748 | 151 | 75 | 5 | 3 | 152 | 57 | 189 | 3.78e-13 | 69.3 |
MsG0780037557.01.T01 | AT1G06630 | 26.946 | 334 | 171 | 14 | 1 | 274 | 29 | 349 | 4.25e-13 | 69.7 |
MsG0780037557.01.T01 | AT1G06630 | 26.946 | 334 | 171 | 14 | 1 | 274 | 29 | 349 | 4.25e-13 | 69.7 |
MsG0780037557.01.T01 | AT1G26890 | 37.748 | 151 | 75 | 5 | 3 | 152 | 57 | 189 | 6.11e-13 | 69.3 |
MsG0780037557.01.T01 | AT1G26890 | 37.748 | 151 | 75 | 5 | 3 | 152 | 57 | 189 | 6.11e-13 | 69.3 |
MsG0780037557.01.T01 | AT5G22700 | 31.285 | 179 | 108 | 6 | 3 | 181 | 25 | 188 | 6.82e-13 | 69.3 |
MsG0780037557.01.T01 | AT5G22700 | 31.285 | 179 | 108 | 6 | 3 | 181 | 25 | 188 | 6.82e-13 | 69.3 |
MsG0780037557.01.T01 | AT5G22700 | 31.285 | 179 | 108 | 6 | 3 | 181 | 25 | 188 | 6.82e-13 | 69.3 |
MsG0780037557.01.T01 | AT5G22700 | 31.285 | 179 | 108 | 6 | 3 | 181 | 25 | 188 | 6.82e-13 | 69.3 |
MsG0780037557.01.T01 | AT1G26890 | 37.748 | 151 | 75 | 5 | 3 | 152 | 57 | 189 | 7.21e-13 | 69.3 |
MsG0780037557.01.T01 | AT5G22700 | 31.285 | 179 | 108 | 6 | 3 | 181 | 62 | 225 | 7.64e-13 | 69.3 |
MsG0780037557.01.T01 | AT1G78760 | 30.052 | 193 | 116 | 5 | 3 | 188 | 35 | 215 | 2.15e-12 | 68.2 |
MsG0780037557.01.T01 | AT4G15060 | 26.923 | 286 | 167 | 10 | 3 | 282 | 45 | 294 | 3.41e-12 | 67.4 |
MsG0780037557.01.T01 | AT5G22610 | 26.183 | 317 | 181 | 10 | 3 | 277 | 37 | 342 | 4.38e-12 | 67.0 |
MsG0780037557.01.T01 | AT4G15060 | 26.923 | 286 | 167 | 10 | 3 | 282 | 191 | 440 | 4.77e-12 | 67.0 |
MsG0780037557.01.T01 | AT5G56440 | 25.199 | 377 | 201 | 12 | 3 | 321 | 21 | 374 | 6.29e-12 | 66.6 |
MsG0780037557.01.T01 | AT3G26920 | 27.925 | 265 | 149 | 9 | 85 | 329 | 12 | 254 | 8.38e-12 | 65.5 |
MsG0780037557.01.T01 | AT3G26930 | 25.344 | 363 | 190 | 14 | 3 | 313 | 40 | 373 | 8.46e-12 | 66.2 |
MsG0780037557.01.T01 | AT4G13965 | 26.722 | 363 | 182 | 15 | 3 | 313 | 29 | 359 | 9.08e-12 | 65.9 |
MsG0780037557.01.T01 | AT3G58920 | 31.633 | 196 | 103 | 7 | 1 | 180 | 19 | 199 | 1.05e-11 | 65.9 |
MsG0780037557.01.T01 | AT3G52680 | 26.586 | 331 | 170 | 14 | 1 | 280 | 38 | 346 | 1.56e-11 | 65.1 |
MsG0780037557.01.T01 | AT5G22660 | 29.944 | 177 | 101 | 8 | 3 | 175 | 32 | 189 | 1.60e-11 | 65.5 |
MsG0780037557.01.T01 | AT5G56560 | 30.814 | 172 | 104 | 4 | 4 | 175 | 26 | 182 | 1.68e-11 | 65.1 |
MsG0780037557.01.T01 | AT5G22660 | 29.944 | 177 | 101 | 8 | 3 | 175 | 32 | 189 | 1.77e-11 | 64.7 |
MsG0780037557.01.T01 | AT3G42770 | 26.648 | 349 | 165 | 17 | 1 | 279 | 16 | 343 | 1.98e-11 | 65.1 |
MsG0780037557.01.T01 | AT5G56410 | 32.796 | 186 | 106 | 5 | 3 | 175 | 22 | 201 | 3.32e-11 | 64.3 |
MsG0780037557.01.T01 | AT3G59160 | 29.858 | 211 | 103 | 9 | 1 | 180 | 30 | 226 | 4.66e-11 | 63.9 |
MsG0780037557.01.T01 | AT5G56560 | 30.814 | 172 | 104 | 4 | 4 | 175 | 26 | 182 | 4.94e-11 | 63.9 |
MsG0780037557.01.T01 | AT5G27750 | 28.713 | 202 | 112 | 8 | 1 | 186 | 22 | 207 | 5.25e-11 | 63.9 |
MsG0780037557.01.T01 | AT5G22610 | 28.814 | 177 | 111 | 4 | 3 | 175 | 37 | 202 | 5.66e-11 | 63.9 |
MsG0780037557.01.T01 | AT4G22280 | 26.606 | 327 | 164 | 13 | 4 | 274 | 22 | 328 | 6.38e-11 | 63.2 |
MsG0780037557.01.T01 | AT1G06630 | 30.601 | 183 | 112 | 6 | 1 | 176 | 29 | 203 | 6.64e-11 | 62.8 |
MsG0780037557.01.T01 | AT4G22280 | 26.606 | 327 | 164 | 13 | 4 | 274 | 22 | 328 | 7.04e-11 | 63.2 |
MsG0780037557.01.T01 | AT5G27750 | 28.713 | 202 | 112 | 8 | 1 | 186 | 22 | 207 | 7.89e-11 | 63.2 |
MsG0780037557.01.T01 | AT3G44810 | 26.211 | 351 | 168 | 14 | 1 | 279 | 24 | 355 | 9.98e-11 | 62.8 |
Find 72 sgRNAs with CRISPR-Local
Find 96 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGGCATTGCGGAACAAATTT+TGG | 0.101546 | 7:+28386481 | None:intergenic |
TAAAACCAACATAGGAATTT+TGG | 0.135965 | 7:+28387550 | None:intergenic |
AAAACAAGGACAAAGATAAT+TGG | 0.208399 | 7:-28386510 | MsG0780037557.01.T01:CDS |
TTAAGAGATGGAAGTGAAAC+AGG | 0.263906 | 7:+28387237 | None:intergenic |
AACATAAGATCTCGAAGTTT+AGG | 0.267358 | 7:+28387186 | None:intergenic |
CAATGTACCTTCTCTGTGTT+TGG | 0.281113 | 7:-28386998 | MsG0780037557.01.T01:CDS |
CAACATCTGGCCTTGGGTTC+CGG | 0.285358 | 7:-28387604 | MsG0780037557.01.T01:CDS |
ATCTCTTAAAACTCTTCATT+TGG | 0.303656 | 7:-28387223 | MsG0780037557.01.T01:CDS |
GATCTTATGTTGTTGCTAAC+TGG | 0.307531 | 7:-28387174 | MsG0780037557.01.T01:CDS |
GAGAACACTGATGGGCAATT+TGG | 0.322639 | 7:+28387320 | None:intergenic |
GTAAATAAATCCTCAAGAAT+TGG | 0.335589 | 7:+28387147 | None:intergenic |
CGGATGAAGTTGAGGTATTA+TGG | 0.345128 | 7:-28386537 | MsG0780037557.01.T01:CDS |
GCTTGTGGCAACGGCGTGTT+TGG | 0.359299 | 7:+28387647 | None:intergenic |
ACATAAGATCTCGAAGTTTA+GGG | 0.360375 | 7:+28387187 | None:intergenic |
CCAGATGTTGTTCCATCTCT+TGG | 0.364503 | 7:+28387617 | None:intergenic |
CCAAGAGATGGAACAACATC+TGG | 0.396317 | 7:-28387617 | MsG0780037557.01.T01:CDS |
CCGTCAACACTTTCACCAAA+TGG | 0.400812 | 7:-28387413 | MsG0780037557.01.T01:CDS |
AGAATAAGATCAAGATCATA+AGG | 0.401020 | 7:+28387450 | None:intergenic |
TACAACAAAGTTCACCCATT+TGG | 0.415069 | 7:+28387398 | None:intergenic |
TATCTCTCAGTAGTATCATC+AGG | 0.420657 | 7:-28387354 | MsG0780037557.01.T01:CDS |
AAGCGCAACTAAACTCCAAA+TGG | 0.427891 | 7:+28386791 | None:intergenic |
ATCAAGGTGAAAAGTCTTAA+CGG | 0.430482 | 7:+28387482 | None:intergenic |
AAACAAGGACAAAGATAATT+GGG | 0.435040 | 7:-28386509 | MsG0780037557.01.T01:CDS |
GATGGAACAACATCTGGCCT+TGG | 0.437805 | 7:-28387611 | MsG0780037557.01.T01:CDS |
AAATGCCAAAATTCCTATGT+TGG | 0.445525 | 7:-28387555 | MsG0780037557.01.T01:CDS |
GAACTTTGTTGTACAACGTC+GGG | 0.460741 | 7:-28387388 | MsG0780037557.01.T01:CDS |
GCGCTTCTCTCCATCATAGT+TGG | 0.462994 | 7:-28386774 | MsG0780037557.01.T01:CDS |
TCAAGGTGAAAAGTCTTAAC+GGG | 0.463777 | 7:+28387483 | None:intergenic |
CGTCAACACTTTCACCAAAT+GGG | 0.471765 | 7:-28387412 | MsG0780037557.01.T01:CDS |
CCATTTGGTGAAAGTGTTGA+CGG | 0.473280 | 7:+28387413 | None:intergenic |
CATTTGGTGAAAGTGTTGAC+GGG | 0.483417 | 7:+28387414 | None:intergenic |
ACATTGTGAATGGCTTTCAA+TGG | 0.483658 | 7:+28387015 | None:intergenic |
CATAATACCTCAACTTCATC+CGG | 0.487120 | 7:+28386538 | None:intergenic |
TTAAGAACTTCCAACTATGA+TGG | 0.489750 | 7:+28386764 | None:intergenic |
CAAGCATTCTTTCCAAGAGA+TGG | 0.492972 | 7:-28387629 | MsG0780037557.01.T01:CDS |
GGAAAGAATGCTTGTGGCAA+CGG | 0.496607 | 7:+28387638 | None:intergenic |
ATGGAACAACATCTGGCCTT+GGG | 0.503250 | 7:-28387610 | MsG0780037557.01.T01:CDS |
TCTGTGTTTGGAAATTGACC+AGG | 0.517417 | 7:-28386986 | MsG0780037557.01.T01:intron |
TGAACTTTGTTGTACAACGT+CGG | 0.522181 | 7:-28387389 | MsG0780037557.01.T01:CDS |
ATGTCGCTGAAATCAAGAAC+CGG | 0.523465 | 7:+28387585 | None:intergenic |
AAAATTAATAAAACCAACAT+AGG | 0.523494 | 7:+28387542 | None:intergenic |
CAGAGAAGGTACATTGTGAA+TGG | 0.548466 | 7:+28387005 | None:intergenic |
AACTGGATGTCCAATTCTTG+AGG | 0.549319 | 7:-28387157 | MsG0780037557.01.T01:CDS |
AGCGCAACTAAACTCCAAAT+GGG | 0.550595 | 7:+28386792 | None:intergenic |
GAGAACCACAACGGTACTGC+AGG | 0.564396 | 7:+28387296 | None:intergenic |
AAAGTCTTAACGGGAAGTGC+GGG | 0.567080 | 7:+28387492 | None:intergenic |
CATAAGGGTATGAAACATCA+AGG | 0.568178 | 7:+28387466 | None:intergenic |
ATCACATGTAAGAGATTCGT+CGG | 0.571968 | 7:+28387104 | None:intergenic |
GAATAAGATCAAGATCATAA+GGG | 0.576351 | 7:+28387451 | None:intergenic |
AAATCAAGAACCGGAACCCA+AGG | 0.587920 | 7:+28387594 | None:intergenic |
GAGGTCAGATTATGCTAGCA+AGG | 0.596046 | 7:-28386411 | None:intergenic |
ATAGTTAACAAACCTCATCA+AGG | 0.597088 | 7:+28386701 | None:intergenic |
GATCTTATTCTCAAACCTCA+CGG | 0.597534 | 7:-28387438 | MsG0780037557.01.T01:CDS |
ATAACAATCAATATCAGCAT+AGG | 0.597756 | 7:+28387050 | None:intergenic |
ACTGCAGGTGAGAACACTGA+TGG | 0.598122 | 7:+28387311 | None:intergenic |
GATCAGGCCGGATGAAGTTG+AGG | 0.602246 | 7:-28386545 | MsG0780037557.01.T01:CDS |
TCTCACCTGCAGTACCGTTG+TGG | 0.607293 | 7:-28387301 | MsG0780037557.01.T01:CDS |
AAGTTCTTAGGTGTGATGAA+AGG | 0.608770 | 7:+28386461 | None:intergenic |
AAAAGTCTTAACGGGAAGTG+CGG | 0.614580 | 7:+28387491 | None:intergenic |
AAAGTGTTGACGGGGCCGTG+AGG | 0.619613 | 7:+28387423 | None:intergenic |
ATCTCTCAGTAGTATCATCA+GGG | 0.619962 | 7:-28387353 | MsG0780037557.01.T01:CDS |
CTAGCATAATCTGACCTCGT+AGG | 0.624316 | 7:+28386416 | None:intergenic |
TCTCTTGGAAAGAATGCTTG+TGG | 0.629361 | 7:+28387632 | None:intergenic |
CTGCAGGTGAGAACACTGAT+GGG | 0.642182 | 7:+28387312 | None:intergenic |
AATCTCTTACATGTGATGAG+TGG | 0.643816 | 7:-28387098 | MsG0780037557.01.T01:CDS |
TCAATTTCCAAACACAGAGA+AGG | 0.651740 | 7:+28386991 | None:intergenic |
TTGAGTTTCTCAGGCCTACG+AGG | 0.664341 | 7:-28386430 | MsG0780037557.01.T01:CDS |
AGGTGTGATGAAAGGCATTG+CGG | 0.667836 | 7:+28386469 | None:intergenic |
GCATTATTGACAGATCAGGC+CGG | 0.670747 | 7:-28386557 | MsG0780037557.01.T01:intron |
ATTTGGTGAAAGTGTTGACG+GGG | 0.675437 | 7:+28387415 | None:intergenic |
CAAGGACAAAGATAATTGGG+TGG | 0.693542 | 7:-28386506 | MsG0780037557.01.T01:CDS |
ATTAAGTTTGAGAACCACAA+CGG | 0.696054 | 7:+28387287 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATTAATAAAACCAACAT+AGG | + | Chr7:28386529-28386548 | None:intergenic | 15.0% |
!! | TGAAAATTACTTCATTAAAT+GGG | + | Chr7:28387446-28387465 | None:intergenic | 15.0% |
!! | CTGAAAATTACTTCATTAAA+TGG | + | Chr7:28387447-28387466 | None:intergenic | 20.0% |
!!! | CATTTAATGAAGTAATTTTC+AGG | - | Chr7:28387445-28387464 | MsG0780037557.01.T01:CDS | 20.0% |
! | AAAACAAGGACAAAGATAAT+TGG | - | Chr7:28387558-28387577 | MsG0780037557.01.T01:CDS | 25.0% |
! | AAACAAGGACAAAGATAATT+GGG | - | Chr7:28387559-28387578 | MsG0780037557.01.T01:CDS | 25.0% |
! | AGAATAAGATCAAGATCATA+AGG | + | Chr7:28386621-28386640 | None:intergenic | 25.0% |
! | ATAACAATCAATATCAGCAT+AGG | + | Chr7:28387021-28387040 | None:intergenic | 25.0% |
! | ATCTCTTAAAACTCTTCATT+TGG | - | Chr7:28386845-28386864 | MsG0780037557.01.T01:intron | 25.0% |
! | CAAGTTAAAAAAAGTAGGAA+TGG | + | Chr7:28387255-28387274 | None:intergenic | 25.0% |
! | GAATAAGATCAAGATCATAA+GGG | + | Chr7:28386620-28386639 | None:intergenic | 25.0% |
! | GTAAATAAATCCTCAAGAAT+TGG | + | Chr7:28386924-28386943 | None:intergenic | 25.0% |
! | TCAAAAAATTGCAAGTTCTT+AGG | + | Chr7:28387622-28387641 | None:intergenic | 25.0% |
! | TTGTCTTTCTAAATGTTGTA+GGG | - | Chr7:28387212-28387231 | MsG0780037557.01.T01:CDS | 25.0% |
! | TTTCAGGAAAAAAATAGTCA+AGG | + | Chr7:28387169-28387188 | None:intergenic | 25.0% |
! | TTTGTCTTTCTAAATGTTGT+AGG | - | Chr7:28387211-28387230 | MsG0780037557.01.T01:CDS | 25.0% |
!! | CACATCATAGTAAAATTTTC+AGG | + | Chr7:28387185-28387204 | None:intergenic | 25.0% |
!! | TAAAACCAACATAGGAATTT+TGG | + | Chr7:28386521-28386540 | None:intergenic | 25.0% |
!!! | AAATGAAGAGTTTTAAGAGA+TGG | + | Chr7:28386846-28386865 | None:intergenic | 25.0% |
!!! | TTTTTTTAACTTGACCCATT+TGG | - | Chr7:28387262-28387281 | MsG0780037557.01.T01:CDS | 25.0% |
AAATGCCAAAATTCCTATGT+TGG | - | Chr7:28386513-28386532 | MsG0780037557.01.T01:CDS | 30.0% | |
AACATAAGATCTCGAAGTTT+AGG | + | Chr7:28386885-28386904 | None:intergenic | 30.0% | |
ACATAAGATCTCGAAGTTTA+GGG | + | Chr7:28386884-28386903 | None:intergenic | 30.0% | |
ATAGTTAACAAACCTCATCA+AGG | + | Chr7:28387370-28387389 | None:intergenic | 30.0% | |
ATCAAGGTGAAAAGTCTTAA+CGG | + | Chr7:28386589-28386608 | None:intergenic | 30.0% | |
ATTAAGTTTGAGAACCACAA+CGG | + | Chr7:28386784-28386803 | None:intergenic | 30.0% | |
TATGATACTCACTGATGTAA+TGG | - | Chr7:28387111-28387130 | MsG0780037557.01.T01:CDS | 30.0% | |
TGGGTCAAGTTAAAAAAAGT+AGG | + | Chr7:28387260-28387279 | None:intergenic | 30.0% | |
TTAAGAACTTCCAACTATGA+TGG | + | Chr7:28387307-28387326 | None:intergenic | 30.0% | |
! | GGTATTATGGACTAAAAACA+AGG | - | Chr7:28387544-28387563 | MsG0780037557.01.T01:CDS | 30.0% |
!! | AATCGTTTTATTGTGCAAGA+GGG | - | Chr7:28386801-28386820 | MsG0780037557.01.T01:CDS | 30.0% |
!! | TAATCGTTTTATTGTGCAAG+AGG | - | Chr7:28386800-28386819 | MsG0780037557.01.T01:CDS | 30.0% |
!!! | ATTGCACACTTTTAGAACTT+GGG | - | Chr7:28387402-28387421 | MsG0780037557.01.T01:CDS | 30.0% |
!!! | TGCAATTTTTTGAGTTTCTC+AGG | - | Chr7:28387629-28387648 | MsG0780037557.01.T01:CDS | 30.0% |
AAGTTCTTAGGTGTGATGAA+AGG | + | Chr7:28387610-28387629 | None:intergenic | 35.0% | |
AATCTCTTACATGTGATGAG+TGG | - | Chr7:28386970-28386989 | MsG0780037557.01.T01:intron | 35.0% | |
ACATTGTGAATGGCTTTCAA+TGG | + | Chr7:28387056-28387075 | None:intergenic | 35.0% | |
ATCACATGTAAGAGATTCGT+CGG | + | Chr7:28386967-28386986 | None:intergenic | 35.0% | |
ATCTCTCAGTAGTATCATCA+GGG | - | Chr7:28386715-28386734 | MsG0780037557.01.T01:CDS | 35.0% | |
ATGTGCATTATTGACAGATC+AGG | - | Chr7:28387507-28387526 | MsG0780037557.01.T01:CDS | 35.0% | |
CATAATACCTCAACTTCATC+CGG | + | Chr7:28387533-28387552 | None:intergenic | 35.0% | |
GATCTTATGTTGTTGCTAAC+TGG | - | Chr7:28386894-28386913 | MsG0780037557.01.T01:intron | 35.0% | |
GATCTTATTCTCAAACCTCA+CGG | - | Chr7:28386630-28386649 | MsG0780037557.01.T01:intron | 35.0% | |
GTGAGTATCATAAACAAACC+TGG | + | Chr7:28387103-28387122 | None:intergenic | 35.0% | |
TACAACAAAGTTCACCCATT+TGG | + | Chr7:28386673-28386692 | None:intergenic | 35.0% | |
TATCTCTCAGTAGTATCATC+AGG | - | Chr7:28386714-28386733 | MsG0780037557.01.T01:CDS | 35.0% | |
TCAAAAACTTGACCTTGATG+AGG | - | Chr7:28387355-28387374 | MsG0780037557.01.T01:CDS | 35.0% | |
TCAAGGTGAAAAGTCTTAAC+GGG | + | Chr7:28386588-28386607 | None:intergenic | 35.0% | |
TCAATTTCCAAACACAGAGA+AGG | + | Chr7:28387080-28387099 | None:intergenic | 35.0% | |
TTAAGAGATGGAAGTGAAAC+AGG | + | Chr7:28386834-28386853 | None:intergenic | 35.0% | |
! | CATAAGGGTATGAAACATCA+AGG | + | Chr7:28386605-28386624 | None:intergenic | 35.0% |
! | TGAACTTTGTTGTACAACGT+CGG | - | Chr7:28386679-28386698 | MsG0780037557.01.T01:intron | 35.0% |
!!! | AGGTCAAGTTTTTGAAGCTT+AGG | + | Chr7:28387350-28387369 | None:intergenic | 35.0% |
!!! | CATTGCACACTTTTAGAACT+TGG | - | Chr7:28387401-28387420 | MsG0780037557.01.T01:CDS | 35.0% |
!!! | GGTCAAGTTTTTGAAGCTTA+GGG | + | Chr7:28387349-28387368 | None:intergenic | 35.0% |
AAAAGTCTTAACGGGAAGTG+CGG | + | Chr7:28386580-28386599 | None:intergenic | 40.0% | |
AACTGGATGTCCAATTCTTG+AGG | - | Chr7:28386911-28386930 | MsG0780037557.01.T01:intron | 40.0% | |
AAGCGCAACTAAACTCCAAA+TGG | + | Chr7:28387280-28387299 | None:intergenic | 40.0% | |
AGCGCAACTAAACTCCAAAT+GGG | + | Chr7:28387279-28387298 | None:intergenic | 40.0% | |
ATGTCGCTGAAATCAAGAAC+CGG | + | Chr7:28386486-28386505 | None:intergenic | 40.0% | |
CAAGCATTCTTTCCAAGAGA+TGG | - | Chr7:28386439-28386458 | MsG0780037557.01.T01:CDS | 40.0% | |
CAAGGACAAAGATAATTGGG+TGG | - | Chr7:28387562-28387581 | MsG0780037557.01.T01:CDS | 40.0% | |
CAATGTACCTTCTCTGTGTT+TGG | - | Chr7:28387070-28387089 | MsG0780037557.01.T01:CDS | 40.0% | |
CGTCAACACTTTCACCAAAT+GGG | - | Chr7:28386656-28386675 | MsG0780037557.01.T01:intron | 40.0% | |
TCTCTTGGAAAGAATGCTTG+TGG | + | Chr7:28386439-28386458 | None:intergenic | 40.0% | |
TCTGTGTTTGGAAATTGACC+AGG | - | Chr7:28387082-28387101 | MsG0780037557.01.T01:CDS | 40.0% | |
! | CAGAGAAGGTACATTGTGAA+TGG | + | Chr7:28387066-28387085 | None:intergenic | 40.0% |
! | CGGATGAAGTTGAGGTATTA+TGG | - | Chr7:28387531-28387550 | MsG0780037557.01.T01:CDS | 40.0% |
! | GAACTTTGTTGTACAACGTC+GGG | - | Chr7:28386680-28386699 | MsG0780037557.01.T01:intron | 40.0% |
! | GGCATTGCGGAACAAATTTT+GGG | + | Chr7:28387589-28387608 | None:intergenic | 40.0% |
!! | AGGCATTGCGGAACAAATTT+TGG | + | Chr7:28387590-28387609 | None:intergenic | 40.0% |
!! | ATTTGGTGAAAGTGTTGACG+GGG | + | Chr7:28386656-28386675 | None:intergenic | 40.0% |
!! | CATTTGGTGAAAGTGTTGAC+GGG | + | Chr7:28386657-28386676 | None:intergenic | 40.0% |
!! | CCATTTGGTGAAAGTGTTGA+CGG | + | Chr7:28386658-28386677 | None:intergenic | 40.0% |
AAATCAAGAACCGGAACCCA+AGG | + | Chr7:28386477-28386496 | None:intergenic | 45.0% | |
CCAAGAGATGGAACAACATC+TGG | - | Chr7:28386451-28386470 | MsG0780037557.01.T01:CDS | 45.0% | |
CCAGATGTTGTTCCATCTCT+TGG | + | Chr7:28386454-28386473 | None:intergenic | 45.0% | |
CCGTCAACACTTTCACCAAA+TGG | - | Chr7:28386655-28386674 | MsG0780037557.01.T01:intron | 45.0% | |
CTAGCATAATCTGACCTCGT+AGG | + | Chr7:28387655-28387674 | None:intergenic | 45.0% | |
GCATTATTGACAGATCAGGC+CGG | - | Chr7:28387511-28387530 | MsG0780037557.01.T01:CDS | 45.0% | |
GGAAAGAATGCTTGTGGCAA+CGG | + | Chr7:28386433-28386452 | None:intergenic | 45.0% | |
! | AAAGTCTTAACGGGAAGTGC+GGG | + | Chr7:28386579-28386598 | None:intergenic | 45.0% |
! | ATGGAACAACATCTGGCCTT+GGG | - | Chr7:28386458-28386477 | MsG0780037557.01.T01:CDS | 45.0% |
! | GAGAACACTGATGGGCAATT+TGG | + | Chr7:28386751-28386770 | None:intergenic | 45.0% |
!! | AGGTGTGATGAAAGGCATTG+CGG | + | Chr7:28387602-28387621 | None:intergenic | 45.0% |
ACTGCAGGTGAGAACACTGA+TGG | + | Chr7:28386760-28386779 | None:intergenic | 50.0% | |
CTGCAGGTGAGAACACTGAT+GGG | + | Chr7:28386759-28386778 | None:intergenic | 50.0% | |
GATGGAACAACATCTGGCCT+TGG | - | Chr7:28386457-28386476 | MsG0780037557.01.T01:CDS | 50.0% | |
GCGCTTCTCTCCATCATAGT+TGG | - | Chr7:28387294-28387313 | MsG0780037557.01.T01:CDS | 50.0% | |
TTGAGTTTCTCAGGCCTACG+AGG | - | Chr7:28387638-28387657 | MsG0780037557.01.T01:CDS | 50.0% | |
GAGAACCACAACGGTACTGC+AGG | + | Chr7:28386775-28386794 | None:intergenic | 55.0% | |
GATCAGGCCGGATGAAGTTG+AGG | - | Chr7:28387523-28387542 | MsG0780037557.01.T01:CDS | 55.0% | |
TCTCACCTGCAGTACCGTTG+TGG | - | Chr7:28386767-28386786 | MsG0780037557.01.T01:CDS | 55.0% | |
!! | CAACATCTGGCCTTGGGTTC+CGG | - | Chr7:28386464-28386483 | MsG0780037557.01.T01:CDS | 55.0% |
GCTTGTGGCAACGGCGTGTT+TGG | + | Chr7:28386424-28386443 | None:intergenic | 60.0% | |
!! | AAAGTGTTGACGGGGCCGTG+AGG | + | Chr7:28386648-28386667 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr7 | gene | 28386414 | 28387676 | 28386414 | ID=MsG0780037557.01;Name=MsG0780037557.01 |
Chr7 | mRNA | 28386414 | 28387676 | 28386414 | ID=MsG0780037557.01.T01;Parent=MsG0780037557.01;Name=MsG0780037557.01.T01;_AED=0.35;_eAED=0.35;_QI=0|0|0|1|1|0.66|3|0|329 |
Chr7 | exon | 28386987 | 28387676 | 28386987 | ID=MsG0780037557.01.T01:exon:13236;Parent=MsG0780037557.01.T01 |
Chr7 | exon | 28386714 | 28386857 | 28386714 | ID=MsG0780037557.01.T01:exon:13235;Parent=MsG0780037557.01.T01 |
Chr7 | exon | 28386414 | 28386566 | 28386414 | ID=MsG0780037557.01.T01:exon:13234;Parent=MsG0780037557.01.T01 |
Chr7 | CDS | 28386987 | 28387676 | 28386987 | ID=MsG0780037557.01.T01:cds;Parent=MsG0780037557.01.T01 |
Chr7 | CDS | 28386714 | 28386857 | 28386714 | ID=MsG0780037557.01.T01:cds;Parent=MsG0780037557.01.T01 |
Chr7 | CDS | 28386414 | 28386566 | 28386414 | ID=MsG0780037557.01.T01:cds;Parent=MsG0780037557.01.T01 |
Gene Sequence |
Protein sequence |