Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580026706.01.T01 | AES65190.1 | 66.154 | 390 | 123 | 3 | 4 | 390 | 13 | 396 | 8.92E-178 | 510 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580026706.01.T01 | Q8H1R7 | 29.412 | 442 | 226 | 18 | 5 | 387 | 2 | 416 | 1.53E-26 | 113 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580026706.01.T01 | G7IG61 | 66.154 | 390 | 123 | 3 | 4 | 390 | 13 | 396 | 4.26e-178 | 510 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580026706.01.T01 | MTR_2g036470 | 66.154 | 390 | 123 | 3 | 4 | 390 | 13 | 396 | 0.0 | 510 |
| MsG0580026706.01.T01 | MTR_6g045333 | 55.980 | 393 | 159 | 6 | 5 | 390 | 61 | 446 | 5.80e-137 | 399 |
| MsG0580026706.01.T01 | MTR_5g045510 | 55.959 | 386 | 141 | 5 | 6 | 389 | 13 | 371 | 5.16e-134 | 389 |
| MsG0580026706.01.T01 | MTR_5g007410 | 54.167 | 384 | 169 | 4 | 6 | 387 | 27 | 405 | 8.97e-132 | 385 |
| MsG0580026706.01.T01 | MTR_5g045170 | 54.220 | 391 | 159 | 7 | 6 | 390 | 15 | 391 | 3.32e-130 | 380 |
| MsG0580026706.01.T01 | MTR_5g039490 | 52.308 | 390 | 147 | 5 | 5 | 389 | 20 | 375 | 1.18e-128 | 375 |
| MsG0580026706.01.T01 | MTR_3g071850 | 53.213 | 389 | 168 | 6 | 5 | 386 | 24 | 405 | 3.56e-122 | 374 |
| MsG0580026706.01.T01 | MTR_5g039450 | 50.909 | 385 | 152 | 6 | 5 | 387 | 6 | 355 | 2.65e-121 | 355 |
| MsG0580026706.01.T01 | MTR_5g031970 | 51.538 | 390 | 136 | 6 | 5 | 390 | 16 | 356 | 1.96e-116 | 343 |
| MsG0580026706.01.T01 | MTR_5g039470 | 51.952 | 333 | 154 | 2 | 22 | 354 | 2 | 328 | 7.33e-114 | 335 |
| MsG0580026706.01.T01 | MTR_0009s0080 | 51.532 | 359 | 161 | 6 | 4 | 357 | 17 | 367 | 6.20e-106 | 319 |
| MsG0580026706.01.T01 | MTR_1g059860 | 47.436 | 312 | 124 | 4 | 72 | 350 | 7 | 311 | 2.37e-85 | 263 |
| MsG0580026706.01.T01 | MTR_1g066830 | 41.927 | 384 | 215 | 5 | 5 | 387 | 8 | 384 | 3.31e-84 | 261 |
| MsG0580026706.01.T01 | MTR_6g040270 | 40.921 | 391 | 205 | 7 | 6 | 389 | 9 | 380 | 4.96e-81 | 253 |
| MsG0580026706.01.T01 | MTR_7g026500 | 38.903 | 401 | 205 | 9 | 5 | 387 | 14 | 392 | 2.40e-80 | 252 |
| MsG0580026706.01.T01 | MTR_5g063950 | 41.432 | 391 | 184 | 9 | 4 | 387 | 7 | 359 | 2.51e-78 | 246 |
| MsG0580026706.01.T01 | MTR_1g108820 | 41.282 | 390 | 208 | 10 | 7 | 389 | 10 | 385 | 4.17e-78 | 246 |
| MsG0580026706.01.T01 | MTR_6g022500 | 39.018 | 387 | 218 | 9 | 7 | 389 | 103 | 475 | 3.88e-75 | 241 |
| MsG0580026706.01.T01 | MTR_1089s0010 | 39.323 | 384 | 213 | 6 | 7 | 387 | 10 | 376 | 5.27e-74 | 235 |
| MsG0580026706.01.T01 | MTR_5g058100 | 40.209 | 383 | 215 | 9 | 7 | 387 | 11 | 381 | 6.27e-74 | 235 |
| MsG0580026706.01.T01 | MTR_5g058000 | 40.000 | 380 | 204 | 7 | 12 | 388 | 15 | 373 | 1.63e-72 | 231 |
| MsG0580026706.01.T01 | MTR_1g085120 | 38.802 | 384 | 223 | 7 | 7 | 387 | 94 | 468 | 4.21e-72 | 233 |
| MsG0580026706.01.T01 | MTR_1g085120 | 38.802 | 384 | 223 | 7 | 7 | 387 | 169 | 543 | 1.44e-71 | 234 |
| MsG0580026706.01.T01 | MTR_5g073420 | 38.931 | 393 | 210 | 11 | 2 | 387 | 8 | 377 | 9.93e-70 | 224 |
| MsG0580026706.01.T01 | MTR_7g055943 | 37.852 | 391 | 219 | 8 | 7 | 387 | 42 | 418 | 2.18e-67 | 219 |
| MsG0580026706.01.T01 | MTR_6g011460 | 39.018 | 387 | 214 | 9 | 7 | 387 | 48 | 418 | 4.57e-66 | 216 |
| MsG0580026706.01.T01 | MTR_1g108800 | 39.793 | 387 | 174 | 9 | 7 | 389 | 10 | 341 | 1.42e-65 | 212 |
| MsG0580026706.01.T01 | MTR_5g065100 | 36.041 | 394 | 196 | 7 | 3 | 390 | 6 | 349 | 4.46e-64 | 211 |
| MsG0580026706.01.T01 | MTR_4g039440 | 36.990 | 392 | 222 | 13 | 5 | 387 | 34 | 409 | 1.47e-60 | 201 |
| MsG0580026706.01.T01 | MTR_5g073370 | 34.663 | 401 | 228 | 11 | 1 | 389 | 1 | 379 | 2.21e-59 | 197 |
| MsG0580026706.01.T01 | MTR_5g044790 | 68.667 | 150 | 13 | 3 | 273 | 390 | 293 | 440 | 3.60e-59 | 198 |
| MsG0580026706.01.T01 | MTR_1g108820 | 39.667 | 300 | 164 | 7 | 7 | 300 | 10 | 298 | 6.70e-54 | 182 |
| MsG0580026706.01.T01 | MTR_3g071790 | 53.140 | 207 | 88 | 4 | 149 | 351 | 1 | 202 | 4.24e-52 | 172 |
| MsG0580026706.01.T01 | MTR_5g061410 | 37.086 | 302 | 155 | 5 | 1 | 301 | 1 | 268 | 8.80e-52 | 174 |
| MsG0580026706.01.T01 | MTR_6g044572 | 32.930 | 413 | 216 | 12 | 7 | 388 | 4 | 386 | 2.75e-50 | 174 |
| MsG0580026706.01.T01 | MTR_1g085120 | 37.710 | 297 | 173 | 7 | 7 | 300 | 181 | 468 | 4.78e-49 | 172 |
| MsG0580026706.01.T01 | MTR_6g022360 | 33.247 | 388 | 225 | 10 | 7 | 387 | 45 | 405 | 3.54e-48 | 169 |
| MsG0580026706.01.T01 | MTR_6g044560 | 33.010 | 412 | 215 | 12 | 7 | 387 | 180 | 561 | 4.47e-48 | 172 |
| MsG0580026706.01.T01 | MTR_6g022520 | 37.618 | 319 | 188 | 5 | 71 | 387 | 1 | 310 | 6.70e-48 | 166 |
| MsG0580026706.01.T01 | MTR_5g073340 | 33.724 | 341 | 177 | 10 | 7 | 337 | 10 | 311 | 1.59e-47 | 164 |
| MsG0580026706.01.T01 | MTR_3g107120 | 32.353 | 408 | 227 | 14 | 3 | 387 | 7 | 388 | 3.15e-44 | 158 |
| MsG0580026706.01.T01 | MTR_5g061680 | 34.483 | 348 | 185 | 11 | 1 | 346 | 7 | 313 | 8.42e-44 | 155 |
| MsG0580026706.01.T01 | MTR_5g054920 | 41.176 | 187 | 98 | 2 | 173 | 357 | 1 | 177 | 2.51e-43 | 149 |
| MsG0580026706.01.T01 | MTR_2g007450 | 30.861 | 418 | 244 | 10 | 5 | 390 | 16 | 420 | 2.57e-43 | 156 |
| MsG0580026706.01.T01 | MTR_7g098510 | 33.838 | 396 | 224 | 13 | 5 | 387 | 18 | 388 | 3.89e-43 | 155 |
| MsG0580026706.01.T01 | MTR_7g007080 | 31.863 | 408 | 228 | 13 | 2 | 389 | 1 | 378 | 9.61e-43 | 154 |
| MsG0580026706.01.T01 | MTR_7g115270 | 31.373 | 408 | 231 | 13 | 7 | 387 | 14 | 399 | 1.03e-42 | 154 |
| MsG0580026706.01.T01 | MTR_1g053025 | 30.958 | 407 | 239 | 11 | 5 | 389 | 2 | 388 | 3.10e-42 | 152 |
| MsG0580026706.01.T01 | MTR_2g007400 | 29.927 | 411 | 242 | 12 | 5 | 389 | 12 | 402 | 7.64e-42 | 152 |
| MsG0580026706.01.T01 | MTR_7g098480 | 34.483 | 377 | 199 | 13 | 5 | 363 | 18 | 364 | 1.15e-41 | 152 |
| MsG0580026706.01.T01 | MTR_7g032380 | 31.472 | 394 | 196 | 15 | 12 | 388 | 18 | 354 | 1.32e-41 | 150 |
| MsG0580026706.01.T01 | MTR_5g008950 | 31.633 | 392 | 219 | 16 | 12 | 388 | 6 | 363 | 4.38e-41 | 149 |
| MsG0580026706.01.T01 | MTR_7g098570 | 33.600 | 375 | 209 | 12 | 5 | 364 | 20 | 369 | 1.42e-40 | 150 |
| MsG0580026706.01.T01 | MTR_7g075820 | 30.935 | 417 | 223 | 16 | 7 | 389 | 8 | 393 | 4.82e-40 | 147 |
| MsG0580026706.01.T01 | MTR_3g107100 | 31.401 | 414 | 232 | 14 | 3 | 389 | 9 | 397 | 1.43e-39 | 145 |
| MsG0580026706.01.T01 | MTR_3g107160 | 30.788 | 406 | 227 | 14 | 5 | 389 | 10 | 382 | 1.97e-39 | 145 |
| MsG0580026706.01.T01 | MTR_1g041245 | 31.762 | 403 | 223 | 15 | 7 | 388 | 13 | 384 | 1.98e-39 | 145 |
| MsG0580026706.01.T01 | MTR_5g008920 | 31.899 | 395 | 231 | 13 | 5 | 388 | 12 | 379 | 2.48e-39 | 144 |
| MsG0580026706.01.T01 | MTR_7g032370 | 32.402 | 358 | 186 | 13 | 17 | 357 | 2 | 320 | 3.83e-39 | 143 |
| MsG0580026706.01.T01 | MTR_7g056433 | 31.378 | 392 | 239 | 11 | 7 | 387 | 14 | 386 | 4.88e-39 | 144 |
| MsG0580026706.01.T01 | MTR_3g105060 | 30.923 | 401 | 215 | 13 | 5 | 387 | 14 | 370 | 5.37e-38 | 140 |
| MsG0580026706.01.T01 | MTR_7g088260 | 31.266 | 403 | 223 | 14 | 5 | 387 | 91 | 459 | 5.56e-38 | 142 |
| MsG0580026706.01.T01 | MTR_2g005990 | 30.310 | 419 | 224 | 17 | 7 | 389 | 8 | 394 | 1.84e-37 | 140 |
| MsG0580026706.01.T01 | MTR_3g082890 | 31.746 | 378 | 209 | 12 | 7 | 357 | 99 | 454 | 3.44e-37 | 140 |
| MsG0580026706.01.T01 | MTR_7g033915 | 31.095 | 402 | 218 | 14 | 3 | 390 | 9 | 365 | 5.15e-37 | 138 |
| MsG0580026706.01.T01 | MTR_3g099830 | 29.383 | 405 | 219 | 13 | 7 | 389 | 14 | 373 | 6.87e-37 | 137 |
| MsG0580026706.01.T01 | MTR_5g024060 | 53.521 | 142 | 61 | 4 | 243 | 382 | 62 | 200 | 1.48e-36 | 134 |
| MsG0580026706.01.T01 | MTR_0543s0010 | 32.824 | 393 | 225 | 12 | 7 | 390 | 88 | 450 | 3.96e-36 | 137 |
| MsG0580026706.01.T01 | MTR_3g108150 | 31.172 | 401 | 239 | 11 | 3 | 390 | 11 | 387 | 7.22e-36 | 135 |
| MsG0580026706.01.T01 | MTR_3g095600 | 32.190 | 379 | 161 | 12 | 7 | 381 | 6 | 292 | 1.25e-35 | 132 |
| MsG0580026706.01.T01 | MTR_4g098590 | 31.436 | 369 | 210 | 11 | 12 | 357 | 6 | 354 | 3.41e-35 | 133 |
| MsG0580026706.01.T01 | MTR_7g033990 | 33.243 | 370 | 197 | 13 | 7 | 357 | 13 | 351 | 4.01e-35 | 134 |
| MsG0580026706.01.T01 | MTR_1g107385 | 31.100 | 418 | 236 | 16 | 1 | 389 | 28 | 422 | 4.45e-35 | 134 |
| MsG0580026706.01.T01 | MTR_7g056287 | 30.105 | 382 | 239 | 11 | 12 | 387 | 10 | 369 | 8.23e-35 | 132 |
| MsG0580026706.01.T01 | MTR_0492s0020 | 33.333 | 360 | 201 | 12 | 7 | 357 | 88 | 417 | 1.11e-34 | 133 |
| MsG0580026706.01.T01 | MTR_7g056277 | 30.366 | 382 | 238 | 11 | 12 | 387 | 266 | 625 | 1.22e-34 | 135 |
| MsG0580026706.01.T01 | MTR_3g023630 | 31.781 | 365 | 214 | 11 | 3 | 357 | 6 | 345 | 1.46e-34 | 131 |
| MsG0580026706.01.T01 | MTR_5g083890 | 30.340 | 412 | 220 | 16 | 7 | 379 | 8 | 391 | 7.00e-34 | 132 |
| MsG0580026706.01.T01 | MTR_3g108560 | 32.924 | 407 | 219 | 17 | 3 | 390 | 18 | 389 | 1.56e-32 | 126 |
| MsG0580026706.01.T01 | MTR_7g083740 | 27.342 | 395 | 228 | 10 | 5 | 387 | 17 | 364 | 2.22e-32 | 125 |
| MsG0580026706.01.T01 | MTR_3g040700 | 30.194 | 361 | 209 | 11 | 1 | 350 | 39 | 367 | 2.29e-32 | 127 |
| MsG0580026706.01.T01 | MTR_7g060470 | 31.989 | 372 | 207 | 14 | 12 | 358 | 10 | 360 | 3.17e-32 | 125 |
| MsG0580026706.01.T01 | MTR_7g034115 | 29.609 | 358 | 216 | 11 | 12 | 357 | 18 | 351 | 8.01e-32 | 124 |
| MsG0580026706.01.T01 | MTR_3g082890 | 28.916 | 415 | 209 | 12 | 7 | 357 | 19 | 411 | 1.35e-31 | 124 |
| MsG0580026706.01.T01 | MTR_3g036250 | 30.846 | 402 | 224 | 14 | 1 | 387 | 1 | 363 | 3.76e-31 | 122 |
| MsG0580026706.01.T01 | MTR_8g085430 | 30.495 | 364 | 150 | 15 | 12 | 357 | 18 | 296 | 1.47e-30 | 119 |
| MsG0580026706.01.T01 | MTR_7g034120 | 33.634 | 333 | 170 | 16 | 76 | 387 | 3 | 305 | 3.88e-29 | 115 |
| MsG0580026706.01.T01 | MTR_7g114710 | 29.442 | 394 | 218 | 11 | 7 | 387 | 15 | 361 | 5.70e-29 | 116 |
| MsG0580026706.01.T01 | MTR_2g007500 | 30.141 | 355 | 187 | 14 | 7 | 336 | 16 | 334 | 6.67e-29 | 115 |
| MsG0580026706.01.T01 | MTR_2g008320 | 29.040 | 396 | 235 | 13 | 12 | 389 | 59 | 426 | 2.64e-28 | 115 |
| MsG0580026706.01.T01 | MTR_2g008310 | 28.288 | 403 | 233 | 14 | 7 | 389 | 4 | 370 | 4.65e-28 | 114 |
| MsG0580026706.01.T01 | MTR_7g056430 | 29.487 | 390 | 222 | 14 | 7 | 384 | 11 | 359 | 2.29e-27 | 114 |
| MsG0580026706.01.T01 | MTR_7g056420 | 29.487 | 390 | 222 | 14 | 7 | 384 | 11 | 359 | 2.48e-27 | 114 |
| MsG0580026706.01.T01 | MTR_3g109982 | 29.387 | 473 | 218 | 16 | 7 | 382 | 15 | 468 | 3.96e-27 | 114 |
| MsG0580026706.01.T01 | MTR_1377s0010 | 41.985 | 131 | 68 | 2 | 227 | 357 | 5 | 127 | 4.04e-26 | 102 |
| MsG0580026706.01.T01 | MTR_3g026920 | 26.667 | 420 | 225 | 13 | 12 | 389 | 26 | 404 | 6.68e-26 | 108 |
| MsG0580026706.01.T01 | MTR_7g034110 | 29.891 | 368 | 179 | 13 | 3 | 357 | 9 | 310 | 1.44e-25 | 106 |
| MsG0580026706.01.T01 | MTR_7g056020 | 29.815 | 379 | 183 | 14 | 7 | 357 | 18 | 341 | 9.21e-25 | 106 |
| MsG0580026706.01.T01 | MTR_7g007340 | 28.841 | 371 | 198 | 14 | 3 | 358 | 11 | 330 | 1.13e-24 | 104 |
| MsG0580026706.01.T01 | MTR_7g056447 | 38.095 | 189 | 108 | 3 | 5 | 191 | 9 | 190 | 2.00e-24 | 102 |
| MsG0580026706.01.T01 | MTR_5g013500 | 28.324 | 346 | 210 | 11 | 55 | 387 | 42 | 362 | 3.40e-24 | 102 |
| MsG0580026706.01.T01 | MTR_7g022105 | 25.606 | 371 | 256 | 7 | 1 | 365 | 45 | 401 | 9.83e-24 | 102 |
| MsG0580026706.01.T01 | MTR_3g095630 | 37.427 | 171 | 93 | 5 | 214 | 381 | 17 | 176 | 1.26e-23 | 97.4 |
| MsG0580026706.01.T01 | MTR_2g007360 | 28.125 | 416 | 210 | 19 | 7 | 389 | 14 | 373 | 1.65e-23 | 101 |
| MsG0580026706.01.T01 | MTR_5g033200 | 38.372 | 172 | 94 | 4 | 214 | 382 | 12 | 174 | 1.99e-23 | 96.7 |
| MsG0580026706.01.T01 | MTR_3g467400 | 27.250 | 400 | 232 | 12 | 7 | 387 | 5 | 364 | 4.97e-23 | 99.8 |
| MsG0580026706.01.T01 | MTR_7g021990 | 25.000 | 388 | 263 | 8 | 1 | 378 | 44 | 413 | 1.05e-22 | 99.4 |
| MsG0580026706.01.T01 | MTR_3g087260 | 34.643 | 280 | 145 | 9 | 126 | 390 | 201 | 457 | 1.40e-22 | 99.4 |
| MsG0580026706.01.T01 | MTR_5g012840 | 28.655 | 342 | 162 | 14 | 30 | 357 | 14 | 287 | 1.71e-22 | 97.4 |
| MsG0580026706.01.T01 | MTR_7g021950 | 25.000 | 388 | 263 | 8 | 1 | 378 | 44 | 413 | 2.23e-22 | 99.0 |
| MsG0580026706.01.T01 | MTR_8g058965 | 26.531 | 441 | 254 | 14 | 12 | 388 | 20 | 454 | 2.56e-22 | 98.6 |
| MsG0580026706.01.T01 | MTR_5g058350 | 36.757 | 185 | 84 | 5 | 4 | 186 | 7 | 160 | 2.96e-21 | 90.5 |
| MsG0580026706.01.T01 | MTR_6g022390 | 38.462 | 143 | 76 | 5 | 1 | 133 | 1 | 141 | 3.91e-21 | 89.4 |
| MsG0580026706.01.T01 | MTR_5g084070 | 27.488 | 422 | 251 | 14 | 3 | 382 | 11 | 419 | 9.49e-21 | 94.0 |
| MsG0580026706.01.T01 | MTR_3g095640 | 37.255 | 153 | 87 | 5 | 3 | 146 | 13 | 165 | 1.11e-20 | 89.0 |
| MsG0580026706.01.T01 | MTR_8g469020 | 27.753 | 454 | 249 | 21 | 4 | 388 | 6 | 449 | 1.15e-20 | 93.6 |
| MsG0580026706.01.T01 | MTR_5g076150 | 35.294 | 221 | 122 | 8 | 117 | 322 | 13 | 227 | 1.44e-20 | 90.1 |
| MsG0580026706.01.T01 | MTR_4g032730 | 26.807 | 429 | 235 | 15 | 3 | 357 | 13 | 436 | 6.79e-20 | 91.7 |
| MsG0580026706.01.T01 | MTR_7g007370 | 28.763 | 372 | 177 | 13 | 3 | 356 | 15 | 316 | 7.44e-20 | 90.1 |
| MsG0580026706.01.T01 | MTR_5g024050 | 53.191 | 94 | 40 | 1 | 149 | 242 | 1 | 90 | 9.29e-20 | 84.3 |
| MsG0580026706.01.T01 | MTR_8g077460 | 25.313 | 399 | 250 | 10 | 3 | 387 | 8 | 372 | 3.00e-19 | 89.0 |
| MsG0580026706.01.T01 | MTR_6g083130 | 43.902 | 123 | 55 | 3 | 83 | 204 | 213 | 322 | 9.04e-19 | 86.7 |
| MsG0580026706.01.T01 | MTR_8g062270 | 25.298 | 419 | 237 | 15 | 5 | 357 | 16 | 424 | 2.84e-18 | 86.7 |
| MsG0580026706.01.T01 | MTR_2g007550 | 28.212 | 397 | 193 | 15 | 7 | 389 | 16 | 334 | 3.40e-18 | 85.5 |
| MsG0580026706.01.T01 | MTR_2g083840 | 25.618 | 445 | 266 | 16 | 2 | 388 | 18 | 455 | 8.78e-18 | 85.1 |
| MsG0580026706.01.T01 | MTR_4g080610 | 25.956 | 366 | 210 | 9 | 3 | 357 | 10 | 325 | 1.26e-17 | 84.0 |
| MsG0580026706.01.T01 | MTR_4g134150 | 36.364 | 176 | 99 | 6 | 18 | 190 | 23 | 188 | 2.05e-17 | 81.3 |
| MsG0580026706.01.T01 | MTR_8g468810 | 26.490 | 453 | 254 | 17 | 2 | 388 | 22 | 461 | 3.16e-17 | 83.6 |
| MsG0580026706.01.T01 | MTR_3g108560 | 32.362 | 309 | 165 | 14 | 3 | 298 | 18 | 295 | 4.83e-17 | 81.6 |
| MsG0580026706.01.T01 | MTR_3g106960 | 31.217 | 189 | 97 | 9 | 215 | 390 | 30 | 198 | 8.02e-17 | 79.7 |
| MsG0580026706.01.T01 | MTR_0571s0010 | 46.250 | 80 | 42 | 1 | 7 | 86 | 34 | 112 | 1.04e-16 | 75.9 |
| MsG0580026706.01.T01 | MTR_4g080773 | 23.741 | 417 | 249 | 12 | 7 | 357 | 21 | 434 | 1.19e-16 | 82.0 |
| MsG0580026706.01.T01 | MTR_4g080773 | 23.741 | 417 | 249 | 12 | 7 | 357 | 21 | 434 | 1.41e-16 | 81.6 |
| MsG0580026706.01.T01 | MTR_5g080710 | 26.764 | 411 | 218 | 16 | 7 | 358 | 35 | 421 | 5.77e-16 | 79.7 |
| MsG0580026706.01.T01 | MTR_3g114200 | 38.298 | 141 | 72 | 5 | 7 | 141 | 21 | 152 | 6.85e-16 | 75.1 |
| MsG0580026706.01.T01 | MTR_4g056020 | 24.356 | 427 | 223 | 19 | 7 | 358 | 11 | 412 | 7.18e-16 | 79.3 |
| MsG0580026706.01.T01 | MTR_8g062080 | 24.362 | 431 | 271 | 12 | 4 | 388 | 22 | 443 | 7.91e-16 | 79.3 |
| MsG0580026706.01.T01 | MTR_8g445780 | 24.679 | 389 | 234 | 14 | 3 | 342 | 11 | 389 | 1.03e-15 | 78.6 |
| MsG0580026706.01.T01 | MTR_2g072530 | 23.707 | 464 | 246 | 17 | 3 | 388 | 11 | 444 | 1.05e-15 | 79.0 |
| MsG0580026706.01.T01 | MTR_8g468840 | 25.666 | 413 | 237 | 14 | 7 | 357 | 16 | 420 | 1.38e-15 | 78.6 |
| MsG0580026706.01.T01 | MTR_7g034090 | 35.862 | 145 | 77 | 5 | 252 | 388 | 174 | 310 | 1.60e-15 | 78.2 |
| MsG0580026706.01.T01 | MTR_7g081290 | 33.582 | 134 | 77 | 4 | 254 | 378 | 117 | 247 | 2.59e-15 | 75.5 |
| MsG0580026706.01.T01 | MTR_5g092960 | 25.111 | 450 | 257 | 16 | 7 | 387 | 21 | 459 | 2.66e-15 | 77.8 |
| MsG0580026706.01.T01 | MTR_8g467800 | 24.757 | 412 | 243 | 15 | 5 | 357 | 20 | 423 | 2.83e-15 | 77.4 |
| MsG0580026706.01.T01 | MTR_2g007090 | 27.686 | 242 | 132 | 8 | 154 | 388 | 87 | 292 | 3.15e-15 | 75.9 |
| MsG0580026706.01.T01 | MTR_5g045700 | 67.391 | 46 | 15 | 0 | 6 | 51 | 14 | 59 | 3.98e-15 | 69.7 |
| MsG0580026706.01.T01 | MTR_8g070950 | 27.570 | 428 | 242 | 18 | 12 | 388 | 22 | 432 | 4.12e-15 | 77.0 |
| MsG0580026706.01.T01 | MTR_7g075800 | 24.272 | 412 | 225 | 17 | 12 | 363 | 16 | 400 | 5.87e-15 | 77.0 |
| MsG0580026706.01.T01 | MTR_7g056280 | 29.279 | 222 | 127 | 9 | 178 | 387 | 367 | 570 | 7.02e-15 | 76.6 |
| MsG0580026706.01.T01 | MTR_4g080787 | 24.641 | 418 | 241 | 14 | 7 | 357 | 21 | 431 | 7.22e-15 | 76.3 |
| MsG0580026706.01.T01 | MTR_7g033945 | 34.302 | 172 | 94 | 6 | 3 | 164 | 9 | 171 | 7.80e-15 | 72.4 |
| MsG0580026706.01.T01 | MTR_4g093690 | 31.088 | 193 | 111 | 9 | 5 | 186 | 18 | 199 | 9.28e-15 | 74.3 |
| MsG0580026706.01.T01 | MTR_6g029350 | 30.556 | 180 | 101 | 7 | 217 | 389 | 35 | 197 | 1.00e-14 | 73.6 |
| MsG0580026706.01.T01 | MTR_5g073400 | 38.129 | 139 | 73 | 4 | 81 | 217 | 7 | 134 | 3.36e-14 | 69.7 |
| MsG0580026706.01.T01 | MTR_3g110010 | 37.297 | 185 | 103 | 5 | 7 | 188 | 15 | 189 | 4.27e-14 | 74.3 |
| MsG0580026706.01.T01 | MTR_4g056030 | 24.651 | 430 | 218 | 20 | 7 | 358 | 11 | 412 | 5.04e-14 | 73.6 |
| MsG0580026706.01.T01 | MTR_3g115430 | 30.275 | 109 | 72 | 2 | 280 | 387 | 17 | 122 | 1.80e-13 | 67.0 |
| MsG0580026706.01.T01 | MTR_1g038710 | 24.476 | 429 | 236 | 16 | 2 | 358 | 16 | 428 | 4.00e-13 | 70.9 |
| MsG0580026706.01.T01 | MTR_5g024040 | 68.293 | 41 | 13 | 0 | 4 | 44 | 21 | 61 | 8.10e-13 | 63.2 |
| MsG0580026706.01.T01 | MTR_2g020180 | 36.111 | 108 | 52 | 3 | 257 | 357 | 88 | 185 | 1.48e-12 | 67.0 |
| MsG0580026706.01.T01 | MTR_8g014290 | 32.258 | 155 | 88 | 4 | 2 | 140 | 7 | 160 | 1.98e-12 | 65.1 |
| MsG0580026706.01.T01 | MTR_8g467790 | 26.796 | 362 | 219 | 12 | 7 | 337 | 150 | 496 | 2.82e-12 | 68.6 |
| MsG0580026706.01.T01 | MTR_3g107940 | 28.922 | 204 | 128 | 5 | 183 | 373 | 11 | 210 | 3.00e-12 | 67.8 |
| MsG0580026706.01.T01 | MTR_6g033095 | 46.154 | 78 | 42 | 0 | 283 | 360 | 110 | 187 | 6.14e-12 | 64.7 |
| MsG0580026706.01.T01 | MTR_8g014160 | 30.808 | 198 | 120 | 6 | 5 | 188 | 41 | 235 | 6.61e-12 | 67.0 |
| MsG0580026706.01.T01 | MTR_8g465380 | 29.064 | 203 | 126 | 6 | 1 | 191 | 8 | 204 | 9.13e-12 | 66.2 |
| MsG0580026706.01.T01 | MTR_8g468810 | 34.171 | 199 | 114 | 9 | 2 | 188 | 22 | 215 | 1.53e-11 | 65.5 |
| MsG0580026706.01.T01 | MTR_8g468810 | 34.171 | 199 | 114 | 9 | 2 | 188 | 22 | 215 | 1.60e-11 | 65.5 |
| MsG0580026706.01.T01 | MTR_8g468810 | 34.171 | 199 | 114 | 9 | 2 | 188 | 22 | 215 | 1.70e-11 | 65.1 |
| MsG0580026706.01.T01 | MTR_8g468810 | 34.171 | 199 | 114 | 9 | 2 | 188 | 22 | 215 | 3.10e-11 | 64.7 |
| MsG0580026706.01.T01 | MTR_7g094030 | 33.121 | 157 | 95 | 3 | 14 | 168 | 37 | 185 | 3.23e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580026706.01.T01 | AT4G26340 | 29.412 | 442 | 226 | 18 | 5 | 387 | 2 | 416 | 1.56e-27 | 113 |
| MsG0580026706.01.T01 | AT5G56420 | 25.935 | 428 | 258 | 15 | 5 | 387 | 6 | 419 | 5.04e-22 | 97.4 |
| MsG0580026706.01.T01 | AT5G56420 | 25.935 | 428 | 258 | 15 | 5 | 387 | 6 | 419 | 5.04e-22 | 97.4 |
| MsG0580026706.01.T01 | AT5G56420 | 25.935 | 428 | 258 | 15 | 5 | 387 | 6 | 419 | 5.04e-22 | 97.4 |
| MsG0580026706.01.T01 | AT4G00160 | 28.465 | 404 | 229 | 15 | 1 | 356 | 12 | 403 | 1.03e-21 | 96.7 |
| MsG0580026706.01.T01 | AT1G78750 | 24.390 | 451 | 262 | 16 | 7 | 390 | 20 | 458 | 6.16e-21 | 94.7 |
| MsG0580026706.01.T01 | AT1G78750 | 24.390 | 451 | 262 | 16 | 7 | 390 | 20 | 458 | 6.16e-21 | 94.7 |
| MsG0580026706.01.T01 | AT3G42770 | 25.169 | 445 | 252 | 18 | 7 | 390 | 1 | 425 | 1.18e-19 | 91.3 |
| MsG0580026706.01.T01 | AT3G44060 | 23.898 | 431 | 267 | 13 | 12 | 390 | 6 | 427 | 1.76e-19 | 90.1 |
| MsG0580026706.01.T01 | AT3G50710 | 25.424 | 413 | 243 | 13 | 5 | 365 | 2 | 401 | 2.33e-19 | 89.7 |
| MsG0580026706.01.T01 | AT5G62970 | 25.828 | 453 | 256 | 16 | 5 | 386 | 2 | 445 | 1.34e-18 | 87.4 |
| MsG0580026706.01.T01 | AT5G38590 | 27.723 | 404 | 221 | 14 | 5 | 358 | 2 | 384 | 1.38e-18 | 87.4 |
| MsG0580026706.01.T01 | AT3G59200 | 33.500 | 200 | 114 | 7 | 1 | 189 | 3 | 194 | 2.51e-18 | 85.9 |
| MsG0580026706.01.T01 | AT5G56370 | 26.650 | 394 | 231 | 13 | 5 | 356 | 2 | 379 | 2.61e-18 | 86.7 |
| MsG0580026706.01.T01 | AT5G56370 | 26.650 | 394 | 231 | 13 | 5 | 356 | 2 | 379 | 2.61e-18 | 86.7 |
| MsG0580026706.01.T01 | AT4G14103 | 35.354 | 198 | 103 | 7 | 5 | 189 | 8 | 193 | 3.47e-18 | 86.3 |
| MsG0580026706.01.T01 | AT4G14103 | 35.354 | 198 | 103 | 7 | 5 | 189 | 8 | 193 | 5.23e-18 | 85.1 |
| MsG0580026706.01.T01 | AT4G14103 | 35.354 | 198 | 103 | 7 | 5 | 189 | 8 | 193 | 5.23e-18 | 85.1 |
| MsG0580026706.01.T01 | AT3G52680 | 27.833 | 406 | 227 | 18 | 1 | 356 | 17 | 406 | 6.11e-18 | 85.5 |
| MsG0580026706.01.T01 | AT4G26350 | 25.513 | 439 | 242 | 17 | 12 | 387 | 9 | 425 | 6.43e-18 | 85.5 |
| MsG0580026706.01.T01 | AT3G59200 | 33.500 | 200 | 114 | 7 | 1 | 189 | 3 | 194 | 6.46e-18 | 85.9 |
| MsG0580026706.01.T01 | AT4G10400 | 27.411 | 394 | 228 | 14 | 5 | 357 | 2 | 378 | 1.29e-17 | 84.3 |
| MsG0580026706.01.T01 | AT4G10400 | 27.411 | 394 | 228 | 14 | 5 | 357 | 2 | 378 | 1.29e-17 | 84.3 |
| MsG0580026706.01.T01 | AT4G10400 | 27.411 | 394 | 228 | 14 | 5 | 357 | 2 | 378 | 1.29e-17 | 84.3 |
| MsG0580026706.01.T01 | AT3G59190 | 32.195 | 205 | 109 | 7 | 5 | 191 | 12 | 204 | 2.18e-17 | 83.6 |
| MsG0580026706.01.T01 | AT3G51530 | 25.432 | 405 | 229 | 16 | 5 | 356 | 30 | 414 | 3.90e-17 | 83.2 |
| MsG0580026706.01.T01 | AT3G59190 | 32.195 | 205 | 109 | 7 | 5 | 191 | 12 | 204 | 4.54e-17 | 83.2 |
| MsG0580026706.01.T01 | AT3G59160 | 29.058 | 382 | 176 | 19 | 5 | 296 | 13 | 389 | 6.20e-17 | 82.8 |
| MsG0580026706.01.T01 | AT5G41830 | 29.435 | 248 | 142 | 7 | 5 | 232 | 13 | 247 | 1.17e-16 | 82.0 |
| MsG0580026706.01.T01 | AT1G51370 | 22.936 | 436 | 271 | 14 | 3 | 390 | 17 | 435 | 1.40e-16 | 81.3 |
| MsG0580026706.01.T01 | AT1G66310 | 23.864 | 440 | 261 | 13 | 7 | 390 | 21 | 442 | 2.10e-16 | 80.9 |
| MsG0580026706.01.T01 | AT5G22610 | 23.709 | 426 | 272 | 14 | 7 | 389 | 20 | 435 | 2.35e-16 | 80.9 |
| MsG0580026706.01.T01 | AT4G00320 | 30.882 | 204 | 115 | 5 | 5 | 189 | 13 | 209 | 2.93e-15 | 77.8 |
| MsG0580026706.01.T01 | AT5G53640 | 26.020 | 196 | 120 | 5 | 5 | 192 | 22 | 200 | 3.37e-14 | 72.0 |
| MsG0580026706.01.T01 | AT1G51370 | 23.577 | 369 | 220 | 12 | 3 | 324 | 17 | 370 | 4.99e-14 | 73.6 |
| MsG0580026706.01.T01 | AT5G56560 | 27.182 | 401 | 233 | 19 | 1 | 356 | 1 | 387 | 5.13e-14 | 73.6 |
| MsG0580026706.01.T01 | AT1G66290 | 22.651 | 415 | 241 | 13 | 3 | 357 | 27 | 421 | 5.17e-14 | 73.6 |
| MsG0580026706.01.T01 | AT5G41630 | 30.476 | 210 | 110 | 9 | 5 | 191 | 12 | 208 | 7.33e-14 | 73.2 |
| MsG0580026706.01.T01 | AT5G41840 | 30.622 | 209 | 116 | 7 | 2 | 189 | 11 | 211 | 7.36e-14 | 73.6 |
| MsG0580026706.01.T01 | AT2G26860 | 24.048 | 420 | 231 | 14 | 5 | 359 | 2 | 398 | 1.11e-13 | 72.4 |
| MsG0580026706.01.T01 | AT2G26860 | 24.048 | 420 | 231 | 14 | 5 | 359 | 2 | 398 | 1.11e-13 | 72.4 |
| MsG0580026706.01.T01 | AT5G22730 | 23.246 | 456 | 269 | 14 | 1 | 389 | 24 | 465 | 1.42e-13 | 72.4 |
| MsG0580026706.01.T01 | AT5G22730 | 23.246 | 456 | 269 | 14 | 1 | 389 | 24 | 465 | 1.42e-13 | 72.4 |
| MsG0580026706.01.T01 | AT1G58310 | 32.710 | 214 | 102 | 10 | 5 | 188 | 8 | 209 | 1.73e-13 | 72.4 |
| MsG0580026706.01.T01 | AT3G59210 | 33.854 | 192 | 110 | 7 | 7 | 188 | 9 | 193 | 2.20e-13 | 72.0 |
| MsG0580026706.01.T01 | AT3G59210 | 33.854 | 192 | 110 | 7 | 7 | 188 | 9 | 193 | 2.20e-13 | 72.0 |
| MsG0580026706.01.T01 | AT3G59210 | 33.854 | 192 | 110 | 7 | 7 | 188 | 9 | 193 | 2.20e-13 | 72.0 |
| MsG0580026706.01.T01 | AT3G59210 | 33.854 | 192 | 110 | 7 | 7 | 188 | 9 | 193 | 2.20e-13 | 72.0 |
| MsG0580026706.01.T01 | AT3G59210 | 33.854 | 192 | 110 | 7 | 7 | 188 | 9 | 193 | 2.20e-13 | 72.0 |
| MsG0580026706.01.T01 | AT1G51370 | 23.582 | 335 | 200 | 10 | 3 | 296 | 17 | 336 | 3.32e-13 | 70.5 |
| MsG0580026706.01.T01 | AT4G13965 | 26.555 | 418 | 232 | 17 | 1 | 368 | 6 | 398 | 3.35e-13 | 71.2 |
| MsG0580026706.01.T01 | AT5G22670 | 30.319 | 188 | 116 | 6 | 5 | 188 | 11 | 187 | 5.30e-13 | 70.5 |
| MsG0580026706.01.T01 | AT3G59170 | 32.569 | 218 | 114 | 8 | 2 | 189 | 4 | 218 | 5.56e-13 | 70.5 |
| MsG0580026706.01.T01 | AT5G38590 | 32.804 | 189 | 112 | 6 | 5 | 188 | 2 | 180 | 5.89e-13 | 69.3 |
| MsG0580026706.01.T01 | AT5G53840 | 22.196 | 428 | 266 | 16 | 12 | 387 | 25 | 437 | 7.35e-13 | 70.1 |
| MsG0580026706.01.T01 | AT4G14096 | 31.606 | 193 | 115 | 6 | 5 | 189 | 8 | 191 | 1.33e-12 | 69.3 |
| MsG0580026706.01.T01 | AT4G14096 | 31.606 | 193 | 115 | 6 | 5 | 189 | 8 | 191 | 1.33e-12 | 69.3 |
| MsG0580026706.01.T01 | AT4G22280 | 25.208 | 361 | 208 | 11 | 5 | 317 | 2 | 348 | 1.34e-12 | 69.3 |
| MsG0580026706.01.T01 | AT4G27050 | 27.049 | 366 | 187 | 16 | 2 | 298 | 1 | 355 | 1.35e-12 | 69.3 |
| MsG0580026706.01.T01 | AT4G27050 | 27.049 | 366 | 187 | 16 | 2 | 298 | 1 | 355 | 1.35e-12 | 69.3 |
| MsG0580026706.01.T01 | AT4G27050 | 27.049 | 366 | 187 | 16 | 2 | 298 | 1 | 355 | 1.35e-12 | 69.3 |
| MsG0580026706.01.T01 | AT4G27050 | 27.049 | 366 | 187 | 16 | 2 | 298 | 1 | 355 | 1.35e-12 | 69.3 |
| MsG0580026706.01.T01 | AT4G27050 | 27.049 | 366 | 187 | 16 | 2 | 298 | 1 | 355 | 1.35e-12 | 69.3 |
| MsG0580026706.01.T01 | AT4G22280 | 33.846 | 195 | 108 | 7 | 5 | 191 | 2 | 183 | 1.50e-12 | 68.6 |
| MsG0580026706.01.T01 | AT3G58880 | 32.161 | 199 | 115 | 6 | 1 | 188 | 1 | 190 | 2.50e-12 | 68.6 |
| MsG0580026706.01.T01 | AT4G09920 | 31.795 | 195 | 120 | 5 | 5 | 194 | 2 | 188 | 2.66e-12 | 67.8 |
| MsG0580026706.01.T01 | AT4G09920 | 31.795 | 195 | 120 | 5 | 5 | 194 | 2 | 188 | 2.66e-12 | 67.8 |
| MsG0580026706.01.T01 | AT1G66320 | 22.449 | 441 | 266 | 15 | 9 | 390 | 34 | 457 | 2.96e-12 | 68.2 |
| MsG0580026706.01.T01 | AT3G58940 | 26.857 | 350 | 186 | 15 | 5 | 298 | 2 | 337 | 2.99e-12 | 68.6 |
| MsG0580026706.01.T01 | AT3G58940 | 26.857 | 350 | 186 | 15 | 5 | 298 | 2 | 337 | 2.99e-12 | 68.6 |
| MsG0580026706.01.T01 | AT3G44810 | 32.995 | 197 | 118 | 6 | 2 | 188 | 4 | 196 | 3.96e-12 | 67.8 |
| MsG0580026706.01.T01 | AT4G09920 | 31.795 | 195 | 120 | 5 | 5 | 194 | 2 | 188 | 4.23e-12 | 66.6 |
| MsG0580026706.01.T01 | AT4G09920 | 31.795 | 195 | 120 | 5 | 5 | 194 | 2 | 188 | 4.23e-12 | 66.6 |
| MsG0580026706.01.T01 | AT4G09920 | 31.795 | 195 | 120 | 5 | 5 | 194 | 2 | 188 | 4.23e-12 | 66.6 |
| MsG0580026706.01.T01 | AT3G52690 | 31.169 | 231 | 122 | 10 | 159 | 353 | 27 | 256 | 7.49e-12 | 66.2 |
| MsG0580026706.01.T01 | AT3G58960 | 29.834 | 181 | 122 | 3 | 7 | 185 | 4 | 181 | 9.59e-12 | 66.6 |
| MsG0580026706.01.T01 | AT3G62440 | 23.276 | 464 | 269 | 15 | 5 | 390 | 2 | 456 | 9.83e-12 | 66.6 |
| MsG0580026706.01.T01 | AT5G38390 | 26.136 | 352 | 174 | 13 | 13 | 296 | 10 | 343 | 1.51e-11 | 66.2 |
| MsG0580026706.01.T01 | AT5G56370 | 26.748 | 329 | 195 | 11 | 5 | 300 | 2 | 317 | 2.68e-11 | 64.7 |
| MsG0580026706.01.T01 | AT5G53635 | 32.275 | 189 | 110 | 7 | 7 | 188 | 2 | 179 | 2.72e-11 | 65.1 |
| MsG0580026706.01.T01 | AT4G13960 | 31.841 | 201 | 112 | 8 | 7 | 194 | 4 | 192 | 3.00e-11 | 65.1 |
| MsG0580026706.01.T01 | AT4G13960 | 31.841 | 201 | 112 | 8 | 7 | 194 | 4 | 192 | 3.00e-11 | 65.1 |
| MsG0580026706.01.T01 | AT3G49150 | 32.161 | 199 | 107 | 8 | 5 | 188 | 16 | 201 | 4.32e-11 | 64.7 |
| MsG0580026706.01.T01 | AT3G58900 | 34.555 | 191 | 100 | 8 | 12 | 188 | 9 | 188 | 5.96e-11 | 63.5 |
| MsG0580026706.01.T01 | AT3G58900 | 34.555 | 191 | 100 | 8 | 12 | 188 | 9 | 188 | 5.96e-11 | 63.5 |
| MsG0580026706.01.T01 | AT3G58900 | 34.555 | 191 | 100 | 8 | 12 | 188 | 9 | 188 | 7.34e-11 | 63.2 |
| MsG0580026706.01.T01 | AT5G56700 | 24.752 | 303 | 179 | 9 | 102 | 358 | 52 | 351 | 7.68e-11 | 63.5 |
Find 89 sgRNAs with CRISPR-Local
Find 115 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGACTCAATACATTCATAAT+TGG | 0.149443 | 5:-42660888 | MsG0580026706.01.T01:CDS |
| GATTTCATGAAACTCCTTTC+TGG | 0.155629 | 5:-42661492 | MsG0580026706.01.T01:CDS |
| AAACTTCAAGCTCTTAAAAT+TGG | 0.178618 | 5:-42660832 | MsG0580026706.01.T01:CDS |
| GTAATTAAATATTCCAATTT+CGG | 0.203461 | 5:+42661465 | None:intergenic |
| TAATTAAATATTCCAATTTC+GGG | 0.215109 | 5:+42661466 | None:intergenic |
| CCTTTCTGGATGCCCGAAAT+TGG | 0.226420 | 5:-42661478 | MsG0580026706.01.T01:CDS |
| GTCCAGGCTCTACAAGTAAT+TGG | 0.233315 | 5:-42661306 | MsG0580026706.01.T01:CDS |
| TCATAATTGGGAAGAGGTTA+TGG | 0.299435 | 5:-42660875 | MsG0580026706.01.T01:CDS |
| AACACTTGTGGTTCTGAGTT+TGG | 0.320278 | 5:-42661610 | MsG0580026706.01.T01:CDS |
| TCAAGTGTTGTTCCAGCCTC+TGG | 0.328343 | 5:-42661755 | MsG0580026706.01.T01:CDS |
| TTTCAATTCTACATGTTGTT+AGG | 0.329375 | 5:+42660642 | None:intergenic |
| GTTTCAACTATTGAAGAAAA+TGG | 0.330258 | 5:-42661423 | MsG0580026706.01.T01:CDS |
| AAGTGTTCTGCAGCAGAAAA+TGG | 0.331554 | 5:+42661626 | None:intergenic |
| TTTCAGTTCGTTTCCAAGAT+AGG | 0.333282 | 5:-42661518 | MsG0580026706.01.T01:CDS |
| AGGCGTGACGTGACACATTC+AGG | 0.361894 | 5:+42660662 | None:intergenic |
| TAACCGACCTTCGACTTTGT+TGG | 0.373330 | 5:-42660909 | MsG0580026706.01.T01:CDS |
| TCCAGGCTCTACAAGTAATT+GGG | 0.374481 | 5:-42661305 | MsG0580026706.01.T01:CDS |
| TCATGAAATCCACCCTATCT+TGG | 0.378865 | 5:+42661505 | None:intergenic |
| ATACTTGTTTGAAAATCCTT+TGG | 0.378906 | 5:-42661655 | MsG0580026706.01.T01:CDS |
| ATTGTTTCAGTATCGACAAA+TGG | 0.399845 | 5:-42661719 | MsG0580026706.01.T01:CDS |
| GACTCAATACATTCATAATT+GGG | 0.402415 | 5:-42660887 | MsG0580026706.01.T01:CDS |
| CTTGAGTTTAAAAGATTTGA+GGG | 0.419423 | 5:+42661773 | None:intergenic |
| CTGAGAGTGAGTGGCACAAC+GGG | 0.426290 | 5:+42661898 | None:intergenic |
| TGGGTATTTCCAATCCGCTT+TGG | 0.427922 | 5:+42660694 | None:intergenic |
| TTCAGTTCGTTTCCAAGATA+GGG | 0.446813 | 5:-42661517 | MsG0580026706.01.T01:CDS |
| AACAGAACAATCAAACATAT+CGG | 0.450018 | 5:+42661572 | None:intergenic |
| GTTCTGAACGCATCTTTGAT+TGG | 0.456457 | 5:+42661945 | None:intergenic |
| ACAAAACGGCATCCAACATA+TGG | 0.460826 | 5:+42661820 | None:intergenic |
| AACCTCGAATAAACAGATAC+TGG | 0.468482 | 5:+42661350 | None:intergenic |
| ACTCTTGACCTGAAACCAAT+GGG | 0.473132 | 5:-42660533 | MsG0580026706.01.T01:CDS |
| AGCCTTAGCATCCCAGAGGC+TGG | 0.476869 | 5:+42661743 | None:intergenic |
| GGCCAGTATCTGTTTATTCG+AGG | 0.479748 | 5:-42661352 | MsG0580026706.01.T01:CDS |
| TTGTTTCAGTATCGACAAAT+GGG | 0.485589 | 5:-42661718 | MsG0580026706.01.T01:CDS |
| TTCCAGCCTCTGGGATGCTA+AGG | 0.490452 | 5:-42661745 | MsG0580026706.01.T01:CDS |
| ACTTGAGTTTAAAAGATTTG+AGG | 0.491101 | 5:+42661772 | None:intergenic |
| ACATTATAGAGTGCTCTTAA+CGG | 0.493138 | 5:+42661327 | None:intergenic |
| TTACATGTGGGAGAGATTGT+AGG | 0.494391 | 5:+42660476 | None:intergenic |
| CCAATTTCGGGCATCCAGAA+AGG | 0.502075 | 5:+42661478 | None:intergenic |
| AATCTCTCCCACATGTAAGC+TGG | 0.505029 | 5:-42660471 | MsG0580026706.01.T01:CDS |
| ATCGTCGTGGAAATCATTGA+TGG | 0.509489 | 5:+42661995 | None:intergenic |
| CAGAAAATGGTAGGTGCCAA+AGG | 0.513040 | 5:+42661639 | None:intergenic |
| TTTCTGCTGCAGAACACTTG+TGG | 0.514448 | 5:-42661622 | MsG0580026706.01.T01:CDS |
| CATTAAAAGTATGTCTAAGT+TGG | 0.516809 | 5:-42661379 | MsG0580026706.01.T01:CDS |
| TCAAGCTCTTAAAATTGGAA+AGG | 0.517356 | 5:-42660827 | MsG0580026706.01.T01:intron |
| CAGGTCAAGAGTACGGAAAA+TGG | 0.517554 | 5:+42660544 | None:intergenic |
| ATTCATCAACCAAAGCGGAT+TGG | 0.521653 | 5:-42660703 | MsG0580026706.01.T01:CDS |
| TCTTCAATAGTTGAAACGCT+TGG | 0.524752 | 5:+42661429 | None:intergenic |
| TGTGGGAGAGATTGTAGGAC+AGG | 0.525874 | 5:+42660481 | None:intergenic |
| CCACCGTTCTCTCGAAGAGA+TGG | 0.525942 | 5:-42661923 | MsG0580026706.01.T01:CDS |
| AGGGTACGGTCCTGAGAGCG+TGG | 0.526169 | 5:+42661792 | None:intergenic |
| CCCCAATTACTTGTAGAGCC+TGG | 0.528040 | 5:+42661304 | None:intergenic |
| CAAGTGTTGTTCCAGCCTCT+GGG | 0.538847 | 5:-42661754 | MsG0580026706.01.T01:CDS |
| ATACATTCATAATTGGGAAG+AGG | 0.538879 | 5:-42660881 | MsG0580026706.01.T01:CDS |
| TTGGTTTCAGGTCAAGAGTA+CGG | 0.544230 | 5:+42660537 | None:intergenic |
| AAGAGCACTCTATAATGTCC+AGG | 0.554645 | 5:-42661322 | MsG0580026706.01.T01:CDS |
| AACGAACTGAAATCAGATGT+AGG | 0.555699 | 5:+42661529 | None:intergenic |
| GTTTAAAAGATTTGAGGGTA+CGG | 0.559273 | 5:+42661778 | None:intergenic |
| TACTCTTGACCTGAAACCAA+TGG | 0.561401 | 5:-42660534 | MsG0580026706.01.T01:CDS |
| TATCACTTCCAGCTTACATG+TGG | 0.563128 | 5:+42660463 | None:intergenic |
| GAAATCAATTCATATTGCAA+AGG | 0.569035 | 5:-42660952 | MsG0580026706.01.T01:CDS |
| ACGAACTGAAATCAGATGTA+GGG | 0.569284 | 5:+42661530 | None:intergenic |
| AGAGCGTGGGGAAAACAAAA+CGG | 0.570328 | 5:+42661806 | None:intergenic |
| GATTCAGTTCTGCCATATGT+TGG | 0.576692 | 5:-42661832 | MsG0580026706.01.T01:CDS |
| AAGTATGTCTAAGTTGGTCG+TGG | 0.578094 | 5:-42661373 | MsG0580026706.01.T01:CDS |
| AATGGCGGTGTTCCAGCGAA+AGG | 0.580424 | 5:-42661405 | MsG0580026706.01.T01:CDS |
| AGTTCGTTTCCAAGATAGGG+TGG | 0.586025 | 5:-42661514 | MsG0580026706.01.T01:CDS |
| ACACATTCAGGAACATGACA+TGG | 0.600406 | 5:+42660674 | None:intergenic |
| ATGGCGGTGTTCCAGCGAAA+GGG | 0.606542 | 5:-42661404 | MsG0580026706.01.T01:CDS |
| GGGTACGGTCCTGAGAGCGT+GGG | 0.610681 | 5:+42661793 | None:intergenic |
| GTGGAAATCATTGATGGTGT+TGG | 0.612267 | 5:+42662001 | None:intergenic |
| GTTCTGCAGCAGAAAATGGT+AGG | 0.628349 | 5:+42661630 | None:intergenic |
| GGTACGGTCCTGAGAGCGTG+GGG | 0.628681 | 5:+42661794 | None:intergenic |
| GAGCCATCTCTTCGAGAGAA+CGG | 0.632469 | 5:+42661920 | None:intergenic |
| CCAGGCTCTACAAGTAATTG+GGG | 0.632647 | 5:-42661304 | MsG0580026706.01.T01:intron |
| TGTCGAAATCTGAGAGTGAG+TGG | 0.633783 | 5:+42661889 | None:intergenic |
| GAGTTTGGCAGATATTCATG+TGG | 0.635094 | 5:-42661595 | MsG0580026706.01.T01:CDS |
| TCTGAGAGTGAGTGGCACAA+CGG | 0.643569 | 5:+42661897 | None:intergenic |
| GGGAGAGATTGTAGGACAGG+AGG | 0.651196 | 5:+42660484 | None:intergenic |
| ATCACTTCCAGCTTACATGT+GGG | 0.652890 | 5:+42660464 | None:intergenic |
| ATTGAGTCCAACAAAGTCGA+AGG | 0.654172 | 5:+42660902 | None:intergenic |
| AGTCCAACAAAGTCGAAGGT+CGG | 0.663120 | 5:+42660906 | None:intergenic |
| TCAACTATTGAAGAAAATGG+CGG | 0.665379 | 5:-42661420 | MsG0580026706.01.T01:CDS |
| AACAGATTCATCAACCAAAG+CGG | 0.670869 | 5:-42660708 | MsG0580026706.01.T01:CDS |
| CACATTCAGGAACATGACAT+GGG | 0.673573 | 5:+42660675 | None:intergenic |
| CCATCTCTTCGAGAGAACGG+TGG | 0.711544 | 5:+42661923 | None:intergenic |
| TGTGAGTTAGTATATCGTCG+TGG | 0.728733 | 5:+42661982 | None:intergenic |
| CTCTTGACCTGAAACCAATG+GGG | 0.739135 | 5:-42660532 | MsG0580026706.01.T01:CDS |
| AATCAGCCTTAGCATCCCAG+AGG | 0.766989 | 5:+42661739 | None:intergenic |
| ATAGATTGAGATACTCAATG+CGG | 0.798334 | 5:+42661676 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATAAAAACAAACTAAA+TGG | + | Chr5:42661458-42661477 | None:intergenic | 10.0% |
| !!! | TAATTCAATTTAATTGATTT+AGG | - | Chr5:42661294-42661313 | MsG0580026706.01.T01:intron | 10.0% |
| !!! | TTAGTTAAATTTTTAGATTT+GGG | + | Chr5:42661340-42661359 | None:intergenic | 10.0% |
| !!! | TTTAGTTAAATTTTTAGATT+TGG | + | Chr5:42661341-42661360 | None:intergenic | 10.0% |
| !! | AATTAAATTGAATTAGAATG+AGG | + | Chr5:42661289-42661308 | None:intergenic | 15.0% |
| !! | GTAATTAAATATTCCAATTT+CGG | + | Chr5:42661009-42661028 | None:intergenic | 15.0% |
| !! | TAATTAAATATTCCAATTTC+GGG | + | Chr5:42661008-42661027 | None:intergenic | 15.0% |
| !!! | GTTTGTTTTTATAATTCTTA+TGG | - | Chr5:42661462-42661481 | MsG0580026706.01.T01:CDS | 15.0% |
| !!! | TATAATATTGATGATAAATG+AGG | + | Chr5:42661209-42661228 | None:intergenic | 15.0% |
| !! | TTCTAATCATTGAAATCATA+AGG | - | Chr5:42661248-42661267 | MsG0580026706.01.T01:intron | 20.0% |
| !!! | GACAAATCGTTATAATTTTA+AGG | - | Chr5:42661406-42661425 | MsG0580026706.01.T01:CDS | 20.0% |
| ! | AAACTTCAAGCTCTTAAAAT+TGG | - | Chr5:42661639-42661658 | MsG0580026706.01.T01:CDS | 25.0% |
| ! | AACAGAACAATCAAACATAT+CGG | + | Chr5:42660902-42660921 | None:intergenic | 25.0% |
| ! | ACTTGAGTTTAAAAGATTTG+AGG | + | Chr5:42660702-42660721 | None:intergenic | 25.0% |
| ! | ATACTTGTTTGAAAATCCTT+TGG | - | Chr5:42660816-42660835 | MsG0580026706.01.T01:intron | 25.0% |
| ! | CTTGAGTTTAAAAGATTTGA+GGG | + | Chr5:42660701-42660720 | None:intergenic | 25.0% |
| ! | GAAATCAATTCATATTGCAA+AGG | - | Chr5:42661519-42661538 | MsG0580026706.01.T01:CDS | 25.0% |
| ! | GACTCAATACATTCATAATT+GGG | - | Chr5:42661584-42661603 | MsG0580026706.01.T01:CDS | 25.0% |
| ! | GACTGTAAATGAAACAAAAT+AGG | + | Chr5:42661743-42661762 | None:intergenic | 25.0% |
| ! | GTTTCAACTATTGAAGAAAA+TGG | - | Chr5:42661048-42661067 | MsG0580026706.01.T01:intron | 25.0% |
| ! | TTTCAATTCTACATGTTGTT+AGG | + | Chr5:42661832-42661851 | None:intergenic | 25.0% |
| !! | CATTAAAAGTATGTCTAAGT+TGG | - | Chr5:42661092-42661111 | MsG0580026706.01.T01:intron | 25.0% |
| !!! | AATTTTAAGAGCTTGAAGTT+TGG | + | Chr5:42661640-42661659 | None:intergenic | 25.0% |
| !!! | ATTTTAAGAGCTTGAAGTTT+GGG | + | Chr5:42661639-42661658 | None:intergenic | 25.0% |
| ATACATTCATAATTGGGAAG+AGG | - | Chr5:42661590-42661609 | MsG0580026706.01.T01:CDS | 30.0% | |
| ATAGATTGAGATACTCAATG+CGG | + | Chr5:42660798-42660817 | None:intergenic | 30.0% | |
| GGACTCAATACATTCATAAT+TGG | - | Chr5:42661583-42661602 | MsG0580026706.01.T01:CDS | 30.0% | |
| GTTTAAAAGATTTGAGGGTA+CGG | + | Chr5:42660696-42660715 | None:intergenic | 30.0% | |
| TAAAGTCGTGAAAAAAGAAG+AGG | - | Chr5:42660612-42660631 | MsG0580026706.01.T01:CDS | 30.0% | |
| TCAACTATTGAAGAAAATGG+CGG | - | Chr5:42661051-42661070 | MsG0580026706.01.T01:intron | 30.0% | |
| TCAAGCTCTTAAAATTGGAA+AGG | - | Chr5:42661644-42661663 | MsG0580026706.01.T01:CDS | 30.0% | |
| ! | ACATTATAGAGTGCTCTTAA+CGG | + | Chr5:42661147-42661166 | None:intergenic | 30.0% |
| ! | AGGCTAAATCTTCTGAAAAA+TGG | + | Chr5:42661970-42661989 | None:intergenic | 30.0% |
| ! | CTAAATCTTCTGAAAAATGG+GGG | + | Chr5:42661967-42661986 | None:intergenic | 30.0% |
| ! | GCTAAATCTTCTGAAAAATG+GGG | + | Chr5:42661968-42661987 | None:intergenic | 30.0% |
| ! | GGCTAAATCTTCTGAAAAAT+GGG | + | Chr5:42661969-42661988 | None:intergenic | 30.0% |
| ! | TCGGTTAAGTTTTCAAACAT+AGG | + | Chr5:42661549-42661568 | None:intergenic | 30.0% |
| !! | ATTGTTTCAGTATCGACAAA+TGG | - | Chr5:42660752-42660771 | MsG0580026706.01.T01:intron | 30.0% |
| !! | TTGTTTCAGTATCGACAAAT+GGG | - | Chr5:42660753-42660772 | MsG0580026706.01.T01:intron | 30.0% |
| AACAGATTCATCAACCAAAG+CGG | - | Chr5:42661763-42661782 | MsG0580026706.01.T01:CDS | 35.0% | |
| AACCTCGAATAAACAGATAC+TGG | + | Chr5:42661124-42661143 | None:intergenic | 35.0% | |
| AACGAACTGAAATCAGATGT+AGG | + | Chr5:42660945-42660964 | None:intergenic | 35.0% | |
| ACGAACTGAAATCAGATGTA+GGG | + | Chr5:42660944-42660963 | None:intergenic | 35.0% | |
| GATTTCATGAAACTCCTTTC+TGG | - | Chr5:42660979-42660998 | MsG0580026706.01.T01:CDS | 35.0% | |
| TCATAATTGGGAAGAGGTTA+TGG | - | Chr5:42661596-42661615 | MsG0580026706.01.T01:CDS | 35.0% | |
| TCTTCAATAGTTGAAACGCT+TGG | + | Chr5:42661045-42661064 | None:intergenic | 35.0% | |
| TTCAGTTCGTTTCCAAGATA+GGG | - | Chr5:42660954-42660973 | MsG0580026706.01.T01:CDS | 35.0% | |
| TTTCAGTTCGTTTCCAAGAT+AGG | - | Chr5:42660953-42660972 | MsG0580026706.01.T01:CDS | 35.0% | |
| ! | AGATGTAGGGTTTTCAACAA+AGG | + | Chr5:42660931-42660950 | None:intergenic | 35.0% |
| ! | AGGTTTGTTTGTCACAACAA+TGG | - | Chr5:42661664-42661683 | MsG0580026706.01.T01:CDS | 35.0% |
| AAGTGTTCTGCAGCAGAAAA+TGG | + | Chr5:42660848-42660867 | None:intergenic | 40.0% | |
| ACAAAACGGCATCCAACATA+TGG | + | Chr5:42660654-42660673 | None:intergenic | 40.0% | |
| ACACATTCAGGAACATGACA+TGG | + | Chr5:42661800-42661819 | None:intergenic | 40.0% | |
| ACTCTTGACCTGAAACCAAT+GGG | - | Chr5:42661938-42661957 | MsG0580026706.01.T01:CDS | 40.0% | |
| ATCACTTCCAGCTTACATGT+GGG | + | Chr5:42662010-42662029 | None:intergenic | 40.0% | |
| ATCGTCGTGGAAATCATTGA+TGG | + | Chr5:42660479-42660498 | None:intergenic | 40.0% | |
| ATTCATCAACCAAAGCGGAT+TGG | - | Chr5:42661768-42661787 | MsG0580026706.01.T01:CDS | 40.0% | |
| ATTGAGTCCAACAAAGTCGA+AGG | + | Chr5:42661572-42661591 | None:intergenic | 40.0% | |
| CACATTCAGGAACATGACAT+GGG | + | Chr5:42661799-42661818 | None:intergenic | 40.0% | |
| GAGTTTGGCAGATATTCATG+TGG | - | Chr5:42660876-42660895 | MsG0580026706.01.T01:CDS | 40.0% | |
| GATTCAGTTCTGCCATATGT+TGG | - | Chr5:42660639-42660658 | MsG0580026706.01.T01:CDS | 40.0% | |
| TACTCTTGACCTGAAACCAA+TGG | - | Chr5:42661937-42661956 | MsG0580026706.01.T01:CDS | 40.0% | |
| TATCACTTCCAGCTTACATG+TGG | + | Chr5:42662011-42662030 | None:intergenic | 40.0% | |
| TCATGAAATCCACCCTATCT+TGG | + | Chr5:42660969-42660988 | None:intergenic | 40.0% | |
| TCCAGGCTCTACAAGTAATT+GGG | - | Chr5:42661166-42661185 | MsG0580026706.01.T01:intron | 40.0% | |
| TCTTATGGTACTGTGCAGAT+GGG | - | Chr5:42661477-42661496 | MsG0580026706.01.T01:CDS | 40.0% | |
| TGTGAGTTAGTATATCGTCG+TGG | + | Chr5:42660492-42660511 | None:intergenic | 40.0% | |
| TTACATGTGGGAGAGATTGT+AGG | + | Chr5:42661998-42662017 | None:intergenic | 40.0% | |
| TTCTTATGGTACTGTGCAGA+TGG | - | Chr5:42661476-42661495 | MsG0580026706.01.T01:CDS | 40.0% | |
| ! | CTTTTAATGTACCCTTTCGC+TGG | + | Chr5:42661081-42661100 | None:intergenic | 40.0% |
| ! | GTTCTGAACGCATCTTTGAT+TGG | + | Chr5:42660529-42660548 | None:intergenic | 40.0% |
| ! | TTGGTTTCAGGTCAAGAGTA+CGG | + | Chr5:42661937-42661956 | None:intergenic | 40.0% |
| !! | AACACTTGTGGTTCTGAGTT+TGG | - | Chr5:42660861-42660880 | MsG0580026706.01.T01:CDS | 40.0% |
| !! | AAGAGCACTCTATAATGTCC+AGG | - | Chr5:42661149-42661168 | MsG0580026706.01.T01:intron | 40.0% |
| !! | AAGTATGTCTAAGTTGGTCG+TGG | - | Chr5:42661098-42661117 | MsG0580026706.01.T01:intron | 40.0% |
| !! | GTGGAAATCATTGATGGTGT+TGG | + | Chr5:42660473-42660492 | None:intergenic | 40.0% |
| AATCTCTCCCACATGTAAGC+TGG | - | Chr5:42662000-42662019 | MsG0580026706.01.T01:CDS | 45.0% | |
| AGAGCGTGGGGAAAACAAAA+CGG | + | Chr5:42660668-42660687 | None:intergenic | 45.0% | |
| AGTCCAACAAAGTCGAAGGT+CGG | + | Chr5:42661568-42661587 | None:intergenic | 45.0% | |
| AGTTCGTTTCCAAGATAGGG+TGG | - | Chr5:42660957-42660976 | MsG0580026706.01.T01:CDS | 45.0% | |
| CAGAAAATGGTAGGTGCCAA+AGG | + | Chr5:42660835-42660854 | None:intergenic | 45.0% | |
| CCAGGCTCTACAAGTAATTG+GGG | - | Chr5:42661167-42661186 | MsG0580026706.01.T01:intron | 45.0% | |
| CTCTTGACCTGAAACCAATG+GGG | - | Chr5:42661939-42661958 | MsG0580026706.01.T01:CDS | 45.0% | |
| GGCCAGTATCTGTTTATTCG+AGG | - | Chr5:42661119-42661138 | MsG0580026706.01.T01:intron | 45.0% | |
| GTCCAGGCTCTACAAGTAAT+TGG | - | Chr5:42661165-42661184 | MsG0580026706.01.T01:intron | 45.0% | |
| GTTCTGCAGCAGAAAATGGT+AGG | + | Chr5:42660844-42660863 | None:intergenic | 45.0% | |
| TAACCGACCTTCGACTTTGT+TGG | - | Chr5:42661562-42661581 | MsG0580026706.01.T01:CDS | 45.0% | |
| TGGGTATTTCCAATCCGCTT+TGG | + | Chr5:42661780-42661799 | None:intergenic | 45.0% | |
| TGTCGAAATCTGAGAGTGAG+TGG | + | Chr5:42660585-42660604 | None:intergenic | 45.0% | |
| TTTCTGCTGCAGAACACTTG+TGG | - | Chr5:42660849-42660868 | MsG0580026706.01.T01:CDS | 45.0% | |
| ! | CAGGTCAAGAGTACGGAAAA+TGG | + | Chr5:42661930-42661949 | None:intergenic | 45.0% |
| AATCAGCCTTAGCATCCCAG+AGG | + | Chr5:42660735-42660754 | None:intergenic | 50.0% | |
| CCAATTTCGGGCATCCAGAA+AGG | + | Chr5:42660996-42661015 | None:intergenic | 50.0% | |
| CCCCAATTACTTGTAGAGCC+TGG | + | Chr5:42661170-42661189 | None:intergenic | 50.0% | |
| CCTTTCTGGATGCCCGAAAT+TGG | - | Chr5:42660993-42661012 | MsG0580026706.01.T01:intron | 50.0% | |
| GAGCCATCTCTTCGAGAGAA+CGG | + | Chr5:42660554-42660573 | None:intergenic | 50.0% | |
| TCTGAGAGTGAGTGGCACAA+CGG | + | Chr5:42660577-42660596 | None:intergenic | 50.0% | |
| TGTGGGAGAGATTGTAGGAC+AGG | + | Chr5:42661993-42662012 | None:intergenic | 50.0% | |
| ! | CAAGTGTTGTTCCAGCCTCT+GGG | - | Chr5:42660717-42660736 | MsG0580026706.01.T01:intron | 50.0% |
| ! | TCAAGTGTTGTTCCAGCCTC+TGG | - | Chr5:42660716-42660735 | MsG0580026706.01.T01:intron | 50.0% |
| !! | TTTGTTTTCCCCACGCTCTC+AGG | - | Chr5:42660669-42660688 | MsG0580026706.01.T01:CDS | 50.0% |
| AATGGCGGTGTTCCAGCGAA+AGG | - | Chr5:42661066-42661085 | MsG0580026706.01.T01:intron | 55.0% | |
| AGGCGTGACGTGACACATTC+AGG | + | Chr5:42661812-42661831 | None:intergenic | 55.0% | |
| ATGGCGGTGTTCCAGCGAAA+GGG | - | Chr5:42661067-42661086 | MsG0580026706.01.T01:intron | 55.0% | |
| CCACCGTTCTCTCGAAGAGA+TGG | - | Chr5:42660548-42660567 | MsG0580026706.01.T01:CDS | 55.0% | |
| CCATCTCTTCGAGAGAACGG+TGG | + | Chr5:42660551-42660570 | None:intergenic | 55.0% | |
| CTGAGAGTGAGTGGCACAAC+GGG | + | Chr5:42660576-42660595 | None:intergenic | 55.0% | |
| GAAAAATGGGGGCTCCCCAT+TGG | + | Chr5:42661956-42661975 | None:intergenic | 55.0% | |
| GGGAGAGATTGTAGGACAGG+AGG | + | Chr5:42661990-42662009 | None:intergenic | 55.0% | |
| !! | TTCCAGCCTCTGGGATGCTA+AGG | - | Chr5:42660726-42660745 | MsG0580026706.01.T01:intron | 55.0% |
| AGCCTTAGCATCCCAGAGGC+TGG | + | Chr5:42660731-42660750 | None:intergenic | 60.0% | |
| AGGGTACGGTCCTGAGAGCG+TGG | + | Chr5:42660682-42660701 | None:intergenic | 65.0% | |
| ! | GGGTACGGTCCTGAGAGCGT+GGG | + | Chr5:42660681-42660700 | None:intergenic | 65.0% |
| ! | GGTACGGTCCTGAGAGCGTG+GGG | + | Chr5:42660680-42660699 | None:intergenic | 65.0% |
| !! | GGGGGCTCCCCATTGGTTTC+AGG | + | Chr5:42661949-42661968 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 42660460 | 42662033 | 42660460 | ID=MsG0580026706.01;Name=MsG0580026706.01 |
| Chr5 | mRNA | 42660460 | 42662033 | 42660460 | ID=MsG0580026706.01.T01;Parent=MsG0580026706.01;Name=MsG0580026706.01.T01;_AED=0.37;_eAED=0.37;_QI=0|0|0|1|1|1|3|0|390 |
| Chr5 | exon | 42661305 | 42662033 | 42661305 | ID=MsG0580026706.01.T01:exon:13444;Parent=MsG0580026706.01.T01 |
| Chr5 | exon | 42660828 | 42660998 | 42660828 | ID=MsG0580026706.01.T01:exon:13443;Parent=MsG0580026706.01.T01 |
| Chr5 | exon | 42660460 | 42660732 | 42660460 | ID=MsG0580026706.01.T01:exon:13442;Parent=MsG0580026706.01.T01 |
| Chr5 | CDS | 42661305 | 42662033 | 42661305 | ID=MsG0580026706.01.T01:cds;Parent=MsG0580026706.01.T01 |
| Chr5 | CDS | 42660828 | 42660998 | 42660828 | ID=MsG0580026706.01.T01:cds;Parent=MsG0580026706.01.T01 |
| Chr5 | CDS | 42660460 | 42660732 | 42660460 | ID=MsG0580026706.01.T01:cds;Parent=MsG0580026706.01.T01 |
| Gene Sequence |
| Protein sequence |
