AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580026710.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580026710.01.T01 MTR_2g036470 56.111 360 110 7 55 375 13 363 1.88e-120 357
MsG0580026710.01.T01 MTR_5g045510 53.168 363 108 9 47 375 5 339 1.63e-106 320
MsG0580026710.01.T01 MTR_5g007410 47.692 390 159 7 40 394 15 394 1.80e-105 320
MsG0580026710.01.T01 MTR_5g045170 51.622 370 128 9 46 377 4 360 6.98e-104 315
MsG0580026710.01.T01 MTR_6g045333 46.154 416 162 12 7 379 21 417 1.11e-102 313
MsG0580026710.01.T01 MTR_5g039490 47.861 374 123 7 41 377 7 345 7.18e-97 296
MsG0580026710.01.T01 MTR_5g039450 50.571 350 137 10 50 377 2 337 1.03e-96 295
MsG0580026710.01.T01 MTR_0009s0080 45.856 362 156 6 45 371 7 363 4.46e-93 288
MsG0580026710.01.T01 MTR_5g039470 46.765 340 128 6 73 372 2 328 2.60e-87 270
MsG0580026710.01.T01 MTR_3g071850 44.531 384 168 9 31 376 1 377 7.05e-87 283
MsG0580026710.01.T01 MTR_5g031970 41.848 368 126 10 46 375 6 323 6.25e-72 231
MsG0580026710.01.T01 MTR_1g059860 42.765 311 107 6 123 368 7 311 1.34e-64 211
MsG0580026710.01.T01 MTR_7g026500 36.740 362 172 8 58 375 16 364 1.79e-59 200
MsG0580026710.01.T01 MTR_1g108820 37.135 377 178 13 58 391 10 370 9.15e-58 195
MsG0580026710.01.T01 MTR_5g073420 38.244 353 154 12 58 371 13 340 1.58e-56 191
MsG0580026710.01.T01 MTR_1089s0010 34.865 370 189 8 58 396 10 358 7.68e-56 189
MsG0580026710.01.T01 MTR_1g066830 36.872 358 186 8 51 376 5 354 1.71e-55 189
MsG0580026710.01.T01 MTR_6g040270 34.903 361 181 9 57 380 9 352 3.12e-54 185
MsG0580026710.01.T01 MTR_5g063950 35.106 376 163 11 58 391 10 346 8.65e-54 184
MsG0580026710.01.T01 MTR_5g058100 35.230 369 187 12 47 379 2 354 9.18e-52 179
MsG0580026710.01.T01 MTR_6g022500 34.091 352 189 7 58 376 103 444 1.82e-51 181
MsG0580026710.01.T01 MTR_1g085120 34.903 361 190 8 58 382 94 445 2.68e-51 180
MsG0580026710.01.T01 MTR_1g085120 34.903 361 190 8 58 382 169 520 6.59e-51 181
MsG0580026710.01.T01 MTR_3g071790 53.073 179 74 5 196 369 29 202 1.44e-49 167
MsG0580026710.01.T01 MTR_5g058000 35.623 393 190 13 58 413 10 376 1.38e-48 170
MsG0580026710.01.T01 MTR_5g065100 33.246 382 165 12 50 391 2 333 2.50e-44 160
MsG0580026710.01.T01 MTR_6g011460 32.578 353 188 7 58 375 48 385 2.23e-43 157
MsG0580026710.01.T01 MTR_1g108800 35.112 356 137 10 58 375 10 309 1.38e-42 153
MsG0580026710.01.T01 MTR_4g039440 33.596 381 186 16 58 396 36 391 5.31e-42 154
MsG0580026710.01.T01 MTR_7g055943 32.768 354 187 7 58 371 42 384 9.30e-42 153
MsG0580026710.01.T01 MTR_1g108820 36.424 302 138 10 58 318 10 298 7.18e-39 144
MsG0580026710.01.T01 MTR_5g061410 35.052 291 125 8 61 319 10 268 2.04e-38 140
MsG0580026710.01.T01 MTR_5g024060 58.333 120 47 2 258 376 62 179 1.05e-36 135
MsG0580026710.01.T01 MTR_5g054920 41.111 180 95 4 198 375 7 177 9.08e-36 131
MsG0580026710.01.T01 MTR_5g073370 30.833 360 188 10 58 375 7 347 9.88e-36 136
MsG0580026710.01.T01 MTR_5g061680 34.591 318 138 12 58 342 13 293 4.86e-34 130
MsG0580026710.01.T01 MTR_1g085120 34.007 297 151 8 58 318 181 468 6.10e-34 132
MsG0580026710.01.T01 MTR_5g073340 31.692 325 150 9 58 344 10 300 1.56e-33 128
MsG0580026710.01.T01 MTR_3g107160 30.390 385 186 18 58 388 12 368 1.67e-32 127
MsG0580026710.01.T01 MTR_7g033915 29.944 354 193 14 58 382 13 340 2.00e-32 126
MsG0580026710.01.T01 MTR_3g107120 28.954 373 191 13 58 375 11 364 2.17e-31 124
MsG0580026710.01.T01 MTR_7g098570 29.500 400 211 14 49 405 13 384 3.05e-31 125
MsG0580026710.01.T01 MTR_6g044572 29.692 357 212 8 58 379 4 356 4.18e-31 123
MsG0580026710.01.T01 MTR_7g033990 29.348 368 195 13 58 382 13 358 5.02e-31 124
MsG0580026710.01.T01 MTR_6g022360 29.775 356 187 9 58 375 45 375 6.42e-31 123
MsG0580026710.01.T01 MTR_6g044560 29.428 367 220 8 48 379 170 532 1.02e-30 125
MsG0580026710.01.T01 MTR_1g041245 30.189 371 193 12 58 383 13 362 5.52e-30 120
MsG0580026710.01.T01 MTR_7g032380 27.778 378 185 10 46 383 3 332 6.72e-30 119
MsG0580026710.01.T01 MTR_3g105060 28.571 378 202 13 58 396 16 364 2.11e-29 118
MsG0580026710.01.T01 MTR_7g056430 31.034 348 207 14 48 377 2 334 2.33e-29 122
MsG0580026710.01.T01 MTR_7g056420 31.034 348 207 14 48 377 2 334 2.74e-29 121
MsG0580026710.01.T01 MTR_2g007450 27.361 413 204 12 41 378 4 395 6.45e-29 118
MsG0580026710.01.T01 MTR_6g022520 33.333 291 146 10 122 375 1 280 1.36e-28 115
MsG0580026710.01.T01 MTR_7g098480 31.633 392 193 16 58 405 20 380 1.83e-28 117
MsG0580026710.01.T01 MTR_3g023630 29.014 355 200 11 58 377 10 347 3.03e-28 115
MsG0580026710.01.T01 MTR_1g053025 28.272 382 208 12 58 386 4 372 6.65e-28 114
MsG0580026710.01.T01 MTR_5g044790 58.491 106 13 1 301 375 302 407 6.91e-28 115
MsG0580026710.01.T01 MTR_7g098510 29.640 361 193 12 58 377 20 360 1.00e-27 114
MsG0580026710.01.T01 MTR_4g098590 27.366 391 196 14 60 388 3 367 1.27e-27 113
MsG0580026710.01.T01 MTR_7g032370 28.065 367 173 13 68 383 2 328 1.91e-27 112
MsG0580026710.01.T01 MTR_3g107100 27.989 368 191 11 58 375 13 356 2.36e-27 113
MsG0580026710.01.T01 MTR_3g108150 28.045 353 210 9 58 377 15 356 2.92e-27 112
MsG0580026710.01.T01 MTR_0492s0020 28.385 384 207 13 34 377 64 419 3.49e-27 113
MsG0580026710.01.T01 MTR_0543s0010 28.385 384 207 13 34 377 64 419 5.23e-27 112
MsG0580026710.01.T01 MTR_7g056433 28.232 379 209 15 45 379 1 360 1.26e-26 110
MsG0580026710.01.T01 MTR_7g083740 28.090 356 218 11 41 377 3 339 4.31e-26 109
MsG0580026710.01.T01 MTR_7g115270 28.000 375 196 14 58 376 14 370 4.44e-26 109
MsG0580026710.01.T01 MTR_3g108560 28.338 367 194 12 54 377 18 358 4.94e-26 109
MsG0580026710.01.T01 MTR_2g007400 26.847 406 217 13 45 387 1 389 6.16e-26 109
MsG0580026710.01.T01 MTR_7g075820 27.436 390 202 13 58 386 8 377 6.46e-26 108
MsG0580026710.01.T01 MTR_3g082890 25.587 383 215 12 42 370 83 449 6.65e-26 110
MsG0580026710.01.T01 MTR_5g083890 28.093 388 188 14 58 375 8 374 7.83e-26 110
MsG0580026710.01.T01 MTR_7g088260 28.378 370 202 13 49 377 85 432 1.25e-25 108
MsG0580026710.01.T01 MTR_5g008950 26.891 357 201 11 58 376 1 335 1.63e-25 107
MsG0580026710.01.T01 MTR_3g099830 26.849 365 214 12 45 375 1 346 1.86e-24 104
MsG0580026710.01.T01 MTR_2g005990 27.968 379 193 13 58 375 8 367 4.98e-24 103
MsG0580026710.01.T01 MTR_1g107385 28.256 407 204 16 48 386 20 406 5.57e-24 103
MsG0580026710.01.T01 MTR_3g095630 36.301 146 81 3 230 375 18 151 7.36e-23 95.9
MsG0580026710.01.T01 MTR_1377s0010 40.000 130 67 3 242 371 5 123 7.40e-23 94.4
MsG0580026710.01.T01 MTR_3g040700 25.862 406 221 12 46 405 33 404 7.51e-23 100
MsG0580026710.01.T01 MTR_2g007500 27.978 361 175 13 42 350 3 330 8.85e-23 99.0
MsG0580026710.01.T01 MTR_5g008920 27.733 375 209 15 41 377 2 352 1.18e-22 99.8
MsG0580026710.01.T01 MTR_7g034115 26.546 388 206 13 58 397 13 369 1.42e-22 99.4
MsG0580026710.01.T01 MTR_3g026920 25.926 378 218 12 50 375 14 381 1.67e-22 99.4
MsG0580026710.01.T01 MTR_7g007080 27.273 374 204 14 53 377 1 355 1.74e-22 99.0
MsG0580026710.01.T01 MTR_2g008310 27.520 367 190 16 58 375 4 343 5.49e-22 97.8
MsG0580026710.01.T01 MTR_2g008320 27.415 383 204 16 44 375 40 399 1.11e-21 97.4
MsG0580026710.01.T01 MTR_3g082890 23.333 420 215 12 42 370 3 406 1.11e-20 94.4
MsG0580026710.01.T01 MTR_2g007360 26.984 378 219 14 45 386 1 357 1.74e-20 93.2
MsG0580026710.01.T01 MTR_7g060470 28.609 381 193 18 58 380 5 364 1.03e-19 90.9
MsG0580026710.01.T01 MTR_6g022390 38.525 122 66 2 58 172 7 126 5.90e-19 84.0
MsG0580026710.01.T01 MTR_2g007550 25.356 351 204 10 47 379 5 315 8.28e-19 87.8
MsG0580026710.01.T01 MTR_3g095600 32.547 212 125 5 58 255 6 213 1.22e-18 86.3
MsG0580026710.01.T01 MTR_7g056020 26.934 349 209 9 54 376 14 342 1.23e-18 89.0
MsG0580026710.01.T01 MTR_7g034110 25.770 357 161 14 58 372 13 307 2.31e-18 86.7
MsG0580026710.01.T01 MTR_3g036250 27.072 362 193 12 58 377 7 339 2.60e-18 86.7
MsG0580026710.01.T01 MTR_3g109982 29.032 248 155 8 137 377 211 444 6.18e-18 87.0
MsG0580026710.01.T01 MTR_5g012840 24.923 325 185 10 81 386 14 298 9.54e-18 84.3
MsG0580026710.01.T01 MTR_7g007340 26.997 363 190 16 49 375 6 329 2.07e-17 84.0
MsG0580026710.01.T01 MTR_5g033200 36.301 146 81 4 226 371 9 142 2.73e-17 80.1
MsG0580026710.01.T01 MTR_7g007370 29.600 375 186 16 45 387 1 329 2.92e-17 83.2
MsG0580026710.01.T01 MTR_7g056447 30.732 205 96 7 58 224 11 207 8.71e-17 80.9
MsG0580026710.01.T01 MTR_0571s0010 46.250 80 42 1 58 137 34 112 1.29e-16 75.9
MsG0580026710.01.T01 MTR_5g045700 63.265 49 18 0 54 102 11 59 3.46e-15 70.1
MsG0580026710.01.T01 MTR_4g080610 25.000 356 217 16 58 390 14 342 4.25e-14 73.9
MsG0580026710.01.T01 MTR_3g108560 27.778 306 154 11 54 318 18 297 5.00e-14 73.2
MsG0580026710.01.T01 MTR_3g106960 30.986 142 74 6 244 376 46 172 6.70e-14 71.6
MsG0580026710.01.T01 MTR_5g024040 68.293 41 13 0 55 95 21 61 8.04e-14 66.2
MsG0580026710.01.T01 MTR_7g034120 28.000 225 128 9 189 405 101 299 1.26e-13 72.0
MsG0580026710.01.T01 MTR_3g095640 33.544 158 90 6 54 199 13 167 1.45e-13 68.9
MsG0580026710.01.T01 MTR_3g114200 33.333 147 75 5 54 190 17 150 1.97e-13 68.2
MsG0580026710.01.T01 MTR_8g085430 27.749 191 86 6 61 207 16 198 4.30e-13 70.5
MsG0580026710.01.T01 MTR_2g007090 34.746 118 63 4 276 387 171 280 7.15e-13 69.3
MsG0580026710.01.T01 MTR_8g468810 25.352 426 222 18 40 373 5 426 7.71e-13 70.5
MsG0580026710.01.T01 MTR_5g058350 29.348 184 71 4 58 210 10 165 8.50e-12 63.9
MsG0580026710.01.T01 MTR_7g033945 32.168 143 80 5 58 190 13 148 2.65e-11 62.8
MsG0580026710.01.T01 MTR_5g013500 24.749 299 167 13 122 380 57 337 6.10e-11 64.3
MsG0580026710.01.T01 MTR_6g033095 41.463 82 47 1 301 382 111 191 7.16e-11 62.0
MsG0580026710.01.T01 MTR_7g068570 32.394 142 75 4 58 190 7 136 8.98e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 84 sgRNAs with CRISPR-Local

Find 244 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTACTCAAACCTTCCAATT+TGG 0.161545 5:+42709408 None:intergenic
CCCCAACTACTTGTAGAATT+TGG 0.169772 5:+42709260 None:intergenic
GGATTCATGAAACTCCTTTC+TGG 0.178896 5:-42709436 MsG0580026710.01.T01:CDS
TCAAGCTCTTAAAATTAAAA+AGG 0.228674 5:-42708668 MsG0580026710.01.T01:intron
CCTTTCTGGATGTCCCAAAT+TGG 0.254064 5:-42709422 MsG0580026710.01.T01:CDS
TAACCGACCTTCGACTATAT+TGG 0.261272 5:-42708759 MsG0580026710.01.T01:CDS
CAAACATTGTCAAAAGGATA+TGG 0.303182 5:-42706527 MsG0580026710.01.T01:CDS
TACAAAGGACTTCCCGTGTT+TGG 0.312641 5:-42708787 MsG0580026710.01.T01:CDS
ATGGTTTGTCATCATCAAAA+AGG 0.321573 5:-42706508 MsG0580026710.01.T01:CDS
GTACTCAAACCTTCCAATTT+GGG 0.329691 5:+42709409 None:intergenic
ACACATTCAGGAACATGATA+TGG 0.337952 5:+42708513 None:intergenic
ATTTCCTTCTTAGACTTGGC+TGG 0.350132 5:-42706469 MsG0580026710.01.T01:CDS
GGGCCATGATCAACTTAGTT+AGG 0.353127 5:+42709326 None:intergenic
AGACGAAACGCAACACATTC+AGG 0.359051 5:+42708501 None:intergenic
TTAGAGAACAAGCGATCTAT+TGG 0.366292 5:+42710008 None:intergenic
TCCAAATTCTACAAGTAGTT+GGG 0.367896 5:-42709261 MsG0580026710.01.T01:CDS
GATATCGACATCGATGATAA+AGG 0.375084 5:-42709819 MsG0580026710.01.T01:CDS
GGCCATGATCAACTTAGTTA+GGG 0.416484 5:+42709327 None:intergenic
GTCCAAATTCTACAAGTAGT+TGG 0.419686 5:-42709262 MsG0580026710.01.T01:CDS
TGGATATTTCCAATCCGCTT+TGG 0.430155 5:+42708533 None:intergenic
AGTTGAAGAATGAAGATAAT+GGG 0.433559 5:-42706391 MsG0580026710.01.T01:CDS
CAGAGAGTGAGTGGCACAAC+GGG 0.448344 5:+42709841 None:intergenic
GTTCTGAACGCGTCTTTGAT+TGG 0.448474 5:+42709888 None:intergenic
AAGTTGAAGAATGAAGATAA+TGG 0.451361 5:-42706392 MsG0580026710.01.T01:CDS
GCACCCTTCCGCTGGAACAC+CGG 0.454977 5:+42709357 None:intergenic
TATGGCTGATTGTGTTACTA+TGG 0.459515 5:-42709670 MsG0580026710.01.T01:CDS
AGCCATAGCCTCCCATTGGC+TGG 0.463335 5:+42709686 None:intergenic
AATGAGCAAACATTGTCAAA+AGG 0.467969 5:-42706533 MsG0580026710.01.T01:CDS
ACTTGAGTTTAAAAGATTTG+AGG 0.473228 5:+42709715 None:intergenic
ATGTGAGTTAGTATATCATC+GGG 0.490122 5:+42709924 None:intergenic
GATTTGTGAGATTCATGATT+GGG 0.492917 5:-42708728 MsG0580026710.01.T01:CDS
GGCCCACATATGTTTATTCG+AGG 0.493023 5:-42709308 MsG0580026710.01.T01:CDS
TTTCCTTCTTAGACTTGGCT+GGG 0.493631 5:-42706468 MsG0580026710.01.T01:CDS
AGATTTGTGAGATTCATGAT+TGG 0.494193 5:-42708729 MsG0580026710.01.T01:CDS
GAAGATTTCCTTCTTAGACT+TGG 0.496328 5:-42706473 MsG0580026710.01.T01:CDS
TTATCCAATTGCAAAACAAA+GGG 0.500539 5:-42706583 MsG0580026710.01.T01:CDS
CAGAATATGGTAGGTGCCGA+TGG 0.501704 5:+42709582 None:intergenic
ATTGTGTTACTATGGACAAA+TGG 0.502644 5:-42709662 MsG0580026710.01.T01:CDS
TTCCAGCCAATGGGAGGCTA+TGG 0.504706 5:-42709688 MsG0580026710.01.T01:CDS
TCAAGTGTCGTTCCAGCCAA+TGG 0.506127 5:-42709698 MsG0580026710.01.T01:CDS
GGTTTGATGCACCCTTCCGC+TGG 0.509631 5:+42709349 None:intergenic
ATCCTTGTTTAAAATTCCAT+CGG 0.510350 5:-42709598 MsG0580026710.01.T01:CDS
GAATGAAGATAATGGGACTT+AGG 0.510448 5:-42706384 None:intergenic
GAACCTCGAATAAACATATG+TGG 0.511540 5:+42709305 None:intergenic
CCAATTTGGGACATCCAGAA+AGG 0.513679 5:+42709422 None:intergenic
GTTCATCAACCAAAGCGGAT+TGG 0.516016 5:-42708542 MsG0580026710.01.T01:CDS
AAAACGAAATTAGAAGTAAG+AGG 0.519589 5:-42710103 MsG0580026710.01.T01:CDS
TAGATCGCTTGTTCTCTAAG+AGG 0.523131 5:-42710004 MsG0580026710.01.T01:CDS
CAAGTGTCGTTCCAGCCAAT+GGG 0.525332 5:-42709697 MsG0580026710.01.T01:CDS
TATGTGAGTTAGTATATCAT+CGG 0.532439 5:+42709923 None:intergenic
AATGCCGGTGTTCCAGCGGA+AGG 0.533291 5:-42709361 MsG0580026710.01.T01:CDS
TGCGAATCGAAAATCAGCTT+CGG 0.533892 5:+42708446 None:intergenic
GGGGAGATATACAAGATAGG+AGG 0.539430 5:-42706562 MsG0580026710.01.T01:CDS
AAACCCAGCCAAGTCTAAGA+AGG 0.539687 5:+42706465 None:intergenic
CTACCGTTCTCTCGAAGAGA+TGG 0.542319 5:-42709866 MsG0580026710.01.T01:CDS
ACCCCTAACTAAGTTGATCA+TGG 0.543541 5:-42709329 MsG0580026710.01.T01:CDS
TCTGGATGTCCCAAATTGGA+AGG 0.547277 5:-42709418 MsG0580026710.01.T01:CDS
GTTATCCAATTGCAAAACAA+AGG 0.561064 5:-42706584 MsG0580026710.01.T01:CDS
GTCGGTTAAGTTTCCAAACA+CGG 0.574621 5:+42708774 None:intergenic
GAGCCTTGTGTAGCAAATGC+CGG 0.576710 5:-42709376 MsG0580026710.01.T01:CDS
ATTCTGCTGCAAAACACTTG+TGG 0.584329 5:-42709565 MsG0580026710.01.T01:CDS
CACAAGTCCAATATAGTCGA+AGG 0.585699 5:+42708752 None:intergenic
TCGGTTAAGTTTCCAAACAC+GGG 0.595213 5:+42708775 None:intergenic
AATCAGCCATAGCCTCCCAT+TGG 0.602060 5:+42709682 None:intergenic
CCAAATTCTACAAGTAGTTG+GGG 0.608339 5:-42709260 MsG0580026710.01.T01:intron
AGCAAATGCCGGTGTTCCAG+CGG 0.610619 5:-42709365 MsG0580026710.01.T01:CDS
TGAGATTCATGATTGGGACG+AGG 0.613309 5:-42708722 MsG0580026710.01.T01:CDS
ATGCCGGTGTTCCAGCGGAA+GGG 0.615754 5:-42709360 MsG0580026710.01.T01:CDS
AACCTCGAATAAACATATGT+GGG 0.627060 5:+42709306 None:intergenic
GAAATCAATTCATATTACAA+AGG 0.628519 5:-42708802 MsG0580026710.01.T01:CDS
GCCATGATCAACTTAGTTAG+GGG 0.629378 5:+42709328 None:intergenic
GAGCCATCTCTTCGAGAGAA+CGG 0.637207 5:+42709863 None:intergenic
TGTCGATATCAGAGAGTGAG+TGG 0.638521 5:+42709832 None:intergenic
GTGTCGTTCCAGCCAATGGG+AGG 0.645138 5:-42709694 MsG0580026710.01.T01:CDS
TCAGAGAGTGAGTGGCACAA+CGG 0.649600 5:+42709840 None:intergenic
ACACCGGCATTTGCTACACA+AGG 0.656442 5:+42709373 None:intergenic
ATCCAATTGCAAAACAAAGG+GGG 0.656970 5:-42706581 MsG0580026710.01.T01:CDS
GATACTGTCCTGAGAACGTG+CGG 0.667148 5:+42709737 None:intergenic
ACATTATAGAGTGCTCTGAA+CGG 0.670248 5:+42709283 None:intergenic
GACAAGTTCATCAACCAAAG+CGG 0.678885 5:-42708547 MsG0580026710.01.T01:CDS
AGTCCAATATAGTCGAAGGT+CGG 0.681011 5:+42708756 None:intergenic
TATCCAATTGCAAAACAAAG+GGG 0.682431 5:-42706582 MsG0580026710.01.T01:CDS
TAAAGGCGTGAAATGTGCAG+AGG 0.714861 5:-42709802 MsG0580026710.01.T01:CDS
TGTGAGTTAGTATATCATCG+GGG 0.797613 5:+42709925 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAACATATTATATTTAAA+AGG - Chr5:42709526-42709545 MsG0580026710.01.T01:intron 10.0%
!! AGAACATATTATATTTAAAA+GGG - Chr5:42709527-42709546 MsG0580026710.01.T01:intron 10.0%
!! TTCTAATTATTCAAATTATA+AGG - Chr5:42707278-42707297 MsG0580026710.01.T01:intron 10.0%
!! AAAAAAAGTTTATGCATAAT+TGG - Chr5:42709448-42709467 MsG0580026710.01.T01:intron 15.0%
!! AAACCTAAAACATTTAAATT+GGG + Chr5:42707398-42707417 None:intergenic 15.0%
!! ACAAACATTTAAAGAAATAA+AGG + Chr5:42709337-42709356 None:intergenic 15.0%
!! ATTTAATATATATTCTGCAT+TGG - Chr5:42709311-42709330 MsG0580026710.01.T01:CDS 15.0%
!! TAAACCTAAAACATTTAAAT+TGG + Chr5:42707399-42707418 None:intergenic 15.0%
!! TAATTTGAATAATTAGAATG+AGG + Chr5:42707276-42707295 None:intergenic 15.0%
!!! TAATGGAATATTTCTATTTT+AGG + Chr5:42709592-42709611 None:intergenic 15.0%
!!! TTTTAATATGTCAATATATG+TGG + Chr5:42708810-42708829 None:intergenic 15.0%
!! AAACCAATTATTAAGGAAAA+TGG + Chr5:42709269-42709288 None:intergenic 20.0%
!! AACCTAAAACATTTAAATTG+GGG + Chr5:42707397-42707416 None:intergenic 20.0%
!! ACAAAAGAAGAAAAACTATA+TGG - Chr5:42710071-42710090 MsG0580026710.01.T01:CDS 20.0%
!! AGGATAAATCATCTAAAAAT+TGG + Chr5:42708152-42708171 None:intergenic 20.0%
!! ATATTAAATACCACAAATGA+CGG + Chr5:42708573-42708592 None:intergenic 20.0%
!! ATCATCAAAAAGAAGAAAAA+GGG + Chr5:42709836-42709855 None:intergenic 20.0%
!! ATGGATGTTATTCAATTTAA+GGG - Chr5:42707508-42707527 MsG0580026710.01.T01:intron 20.0%
!! ATTGAATGCACAAATATTAA+TGG + Chr5:42709609-42709628 None:intergenic 20.0%
!! GAAATCAATTCATATTACAA+AGG - Chr5:42707690-42707709 MsG0580026710.01.T01:intron 20.0%
!! GGATAAATCATCTAAAAATT+GGG + Chr5:42708151-42708170 None:intergenic 20.0%
!! TAAAATTTCGACTAAATTCA+TGG - Chr5:42707489-42707508 MsG0580026710.01.T01:intron 20.0%
!! TATTGACATATTAAAAGCAA+AGG - Chr5:42708814-42708833 MsG0580026710.01.T01:CDS 20.0%
!! TCAAGCTCTTAAAATTAAAA+AGG - Chr5:42707824-42707843 MsG0580026710.01.T01:intron 20.0%
!! TCATTTGTGGTATTTAATAT+TGG - Chr5:42708573-42708592 MsG0580026710.01.T01:intron 20.0%
!! TTTAGCAAAACCAATTATTA+AGG + Chr5:42709276-42709295 None:intergenic 20.0%
!!! ATTGCCATAAAACATATTTT+AGG - Chr5:42708453-42708472 MsG0580026710.01.T01:CDS 20.0%
!!! ATTTAAAATAATGTGAAGGA+TGG - Chr5:42709733-42709752 MsG0580026710.01.T01:CDS 20.0%
!!! CAAATGTAGAAACTTTTTAT+TGG + Chr5:42709670-42709689 None:intergenic 20.0%
!!! CCTTCACATTATTTTAAATA+GGG + Chr5:42709732-42709751 None:intergenic 20.0%
!!! TCCTTCACATTATTTTAAAT+AGG + Chr5:42709733-42709752 None:intergenic 20.0%
!!! TTTTTTTTTCTTTCCAAAAC+AGG + Chr5:42709434-42709453 None:intergenic 20.0%
! AAAACGAAATTAGAAGTAAG+AGG - Chr5:42706389-42706408 MsG0580026710.01.T01:CDS 25.0%
! AAAGAAGAAAAACTATATGG+AGG - Chr5:42710074-42710093 MsG0580026710.01.T01:CDS 25.0%
! AAAGGATGGTAAAAAAAAAC+AGG + Chr5:42708871-42708890 None:intergenic 25.0%
! AACACAAGAAGAAAAATCAA+AGG + Chr5:42708889-42708908 None:intergenic 25.0%
! AAGTTGAAGAATGAAGATAA+TGG - Chr5:42710100-42710119 MsG0580026710.01.T01:CDS 25.0%
! ACTATGTATAAAACGTATGA+AGG + Chr5:42708725-42708744 None:intergenic 25.0%
! ACTTGAGTTTAAAAGATTTG+AGG + Chr5:42706780-42706799 None:intergenic 25.0%
! AGTTGAAGAATGAAGATAAT+GGG - Chr5:42710101-42710120 MsG0580026710.01.T01:CDS 25.0%
! ATAAATTCCATCTTACAAGT+GGG + Chr5:42708192-42708211 None:intergenic 25.0%
! ATATATGGTACTAATGCATT+TGG - Chr5:42708237-42708256 MsG0580026710.01.T01:intron 25.0%
! CATCATCAAAAAGAAGAAAA+AGG + Chr5:42709837-42709856 None:intergenic 25.0%
! CATGGATGTTATTCAATTTA+AGG - Chr5:42707507-42707526 MsG0580026710.01.T01:intron 25.0%
! GATATTACTATTACTACTAC+TGG - Chr5:42708347-42708366 MsG0580026710.01.T01:intron 25.0%
! TATAAATTCCATCTTACAAG+TGG + Chr5:42708193-42708212 None:intergenic 25.0%
! TATGTGAGTTAGTATATCAT+CGG + Chr5:42706572-42706591 None:intergenic 25.0%
! TGGTTTGAACAATATATGTT+TGG - Chr5:42708260-42708279 MsG0580026710.01.T01:intron 25.0%
! TTATCCAATTGCAAAACAAA+GGG - Chr5:42709909-42709928 MsG0580026710.01.T01:CDS 25.0%
! TTTAGACATAATATGCACAA+GGG - Chr5:42709130-42709149 MsG0580026710.01.T01:intron 25.0%
! TTTCATTATTTGCCATCAAA+TGG + Chr5:42709071-42709090 None:intergenic 25.0%
!! ATCCTTGTTTAAAATTCCAT+CGG - Chr5:42706894-42706913 MsG0580026710.01.T01:intron 25.0%
!! CCCTATTTAAAATAATGTGA+AGG - Chr5:42709729-42709748 MsG0580026710.01.T01:CDS 25.0%
!! TCAGCAATTTACAAGTTTTA+TGG + Chr5:42708974-42708993 None:intergenic 25.0%
!! TGGTCCTAAAATATGTTTTA+TGG + Chr5:42708460-42708479 None:intergenic 25.0%
!! TGTCCATTTTCCTTAATAAT+TGG - Chr5:42709263-42709282 MsG0580026710.01.T01:CDS 25.0%
!! TTTACAAATCCTATTTTGCA+TGG - Chr5:42707912-42707931 MsG0580026710.01.T01:intron 25.0%
!! TTTTGTGCTTAAATTGTTTC+AGG - Chr5:42709886-42709905 MsG0580026710.01.T01:CDS 25.0%
!!! AAAGATGAAAGTATTTCTGA+AGG + Chr5:42708658-42708677 None:intergenic 25.0%
!!! AATTTTAAGAGCTTGAAGTT+TGG + Chr5:42707820-42707839 None:intergenic 25.0%
!!! ATTGTTATTTCGTAGATATG+AGG + Chr5:42707318-42707337 None:intergenic 25.0%
!!! ATTTTAAGAGCTTGAAGTTT+GGG + Chr5:42707819-42707838 None:intergenic 25.0%
!!! TCTTTTTGATGATGTCAAAA+GGG - Chr5:42709843-42709862 MsG0580026710.01.T01:CDS 25.0%
!!! TTCTATTTCTTTTAGGTGAA+GGG + Chr5:42708124-42708143 None:intergenic 25.0%
!!! TTCTTTTTGATGATGTCAAA+AGG - Chr5:42709842-42709861 MsG0580026710.01.T01:CDS 25.0%
!!! TTTCTATTTCTTTTAGGTGA+AGG + Chr5:42708125-42708144 None:intergenic 25.0%
AAATCATACTACAACAGCAA+AGG + Chr5:42708759-42708778 None:intergenic 30.0%
AACCTCGAATAAACATATGT+GGG + Chr5:42707189-42707208 None:intergenic 30.0%
AAGTTAAATAGGATAGCAAG+TGG + Chr5:42709196-42709215 None:intergenic 30.0%
AATGAGCAAACATTGTCAAA+AGG - Chr5:42709959-42709978 MsG0580026710.01.T01:CDS 30.0%
ACAGAAGAATGAAACAAACT+AGG + Chr5:42706979-42706998 None:intergenic 30.0%
AGAAAAAGGGTAAAATCCAA+AGG + Chr5:42709823-42709842 None:intergenic 30.0%
AGATTTGTGAGATTCATGAT+TGG - Chr5:42707763-42707782 MsG0580026710.01.T01:intron 30.0%
AGTGTACACATGATAAGAAT+TGG + Chr5:42709481-42709500 None:intergenic 30.0%
ATGTGAGTTAGTATATCATC+GGG + Chr5:42706571-42706590 None:intergenic 30.0%
ATTCCTAGAGAATTCCAAAT+TGG + Chr5:42709171-42709190 None:intergenic 30.0%
CAAACATTGTCAAAAGGATA+TGG - Chr5:42709965-42709984 MsG0580026710.01.T01:CDS 30.0%
CAAGAAGAAAAATCAAAGGA+TGG + Chr5:42708885-42708904 None:intergenic 30.0%
GAAAAAGGGTAAAATCCAAA+GGG + Chr5:42709822-42709841 None:intergenic 30.0%
GATTTGTGAGATTCATGATT+GGG - Chr5:42707764-42707783 MsG0580026710.01.T01:intron 30.0%
GTCCTTAAAATTGTAAGGAT+TGG + Chr5:42707567-42707586 None:intergenic 30.0%
GTCTAGTCCTTAAAATTGTA+AGG + Chr5:42707572-42707591 None:intergenic 30.0%
GTTATCCAATTGCAAAACAA+AGG - Chr5:42709908-42709927 MsG0580026710.01.T01:CDS 30.0%
GTTTAGACATAATATGCACA+AGG - Chr5:42709129-42709148 MsG0580026710.01.T01:intron 30.0%
TATCCAATTGCAAAACAAAG+GGG - Chr5:42709910-42709929 MsG0580026710.01.T01:CDS 30.0%
TCATCTTTGCATTGTTCAAT+CGG - Chr5:42708670-42708689 MsG0580026710.01.T01:CDS 30.0%
TCCAAATTCTACAAGTAGTT+GGG - Chr5:42707231-42707250 MsG0580026710.01.T01:intron 30.0%
TTAGTACCATATATGCATCT+AGG + Chr5:42708231-42708250 None:intergenic 30.0%
TTCATAACTATGTGATTCGT+TGG - Chr5:42708325-42708344 MsG0580026710.01.T01:intron 30.0%
TTCTTCAAAAACAACAGGAT+CGG - Chr5:42706445-42706464 MsG0580026710.01.T01:CDS 30.0%
! AGGTTTGTTTGTTACATCAA+TGG - Chr5:42707844-42707863 MsG0580026710.01.T01:intron 30.0%
! ATGGTTTGTCATCATCAAAA+AGG - Chr5:42709984-42710003 MsG0580026710.01.T01:CDS 30.0%
! ATTGTGTTACTATGGACAAA+TGG - Chr5:42706830-42706849 MsG0580026710.01.T01:intron 30.0%
! CACCCCAATTTAAATGTTTT+AGG - Chr5:42707392-42707411 MsG0580026710.01.T01:intron 30.0%
! GACCAATCCTTACAATTTTA+AGG - Chr5:42707562-42707581 MsG0580026710.01.T01:intron 30.0%
! TGCTATCCTATTTAACTTTC+TGG - Chr5:42709198-42709217 MsG0580026710.01.T01:intron 30.0%
! TGGTTTGTCATCATCAAAAA+GGG - Chr5:42709985-42710004 MsG0580026710.01.T01:CDS 30.0%
!! ATTAGAGACTTGCTGAAATT+GGG - Chr5:42708993-42709012 MsG0580026710.01.T01:intron 30.0%
!! GACAGAGATATTTTAGAGAA+AGG + Chr5:42708924-42708943 None:intergenic 30.0%
!!! CTGTTGTTTTTGAAGAAGAA+GGG + Chr5:42706442-42706461 None:intergenic 30.0%
!!! CTTTTTGATGATGTCAAAAG+GGG - Chr5:42709844-42709863 MsG0580026710.01.T01:CDS 30.0%
!!! TTTTTGATGATGTCAAAAGG+GGG - Chr5:42709845-42709864 MsG0580026710.01.T01:CDS 30.0%
!!! TTTTTTCTTTCCAAAACAGG+AGG + Chr5:42709431-42709450 None:intergenic 30.0%
AACTCAAGCAATGAAACTAC+AGG + Chr5:42708622-42708641 None:intergenic 35.0%
AATCCAAAGGGTCGAAATAT+AGG + Chr5:42709810-42709829 None:intergenic 35.0%
ACACATTCAGGAACATGATA+TGG + Chr5:42707982-42708001 None:intergenic 35.0%
ACTATCGATCCATGCAAAAT+AGG + Chr5:42707924-42707943 None:intergenic 35.0%
AGCAATGAAACTACAGGTAA+CGG + Chr5:42708616-42708635 None:intergenic 35.0%
ATATGCACAAGGGAATTTGT+TGG - Chr5:42709140-42709159 MsG0580026710.01.T01:intron 35.0%
ATCCAAAGGGTCGAAATATA+GGG + Chr5:42709809-42709828 None:intergenic 35.0%
ATCCAATTGCAAAACAAAGG+GGG - Chr5:42709911-42709930 MsG0580026710.01.T01:CDS 35.0%
ATTGCTTAACATGTGCCTTT+AGG + Chr5:42709569-42709588 None:intergenic 35.0%
CAACTCAAGCAATTTCGTTA+TGG + Chr5:42708514-42708533 None:intergenic 35.0%
CCAAATTCTACAAGTAGTTG+GGG - Chr5:42707232-42707251 MsG0580026710.01.T01:intron 35.0%
CCTTCTTCTTCAAAAACAAC+AGG - Chr5:42706440-42706459 MsG0580026710.01.T01:CDS 35.0%
CTAGTTCCTAGATGCATATA+TGG - Chr5:42708222-42708241 MsG0580026710.01.T01:intron 35.0%
GAACCTCGAATAAACATATG+TGG + Chr5:42707190-42707209 None:intergenic 35.0%
GAAGATTTCCTTCTTAGACT+TGG - Chr5:42710019-42710038 MsG0580026710.01.T01:CDS 35.0%
GATATCGACATCGATGATAA+AGG - Chr5:42706673-42706692 MsG0580026710.01.T01:intron 35.0%
GCTACTCCAGAAAGTTAAAT+AGG + Chr5:42709207-42709226 None:intergenic 35.0%
GGATGGTAAAAAAAAACAGG+TGG + Chr5:42708868-42708887 None:intergenic 35.0%
GGGGTGCAAAATTTAGAAAA+GGG + Chr5:42707378-42707397 None:intergenic 35.0%
GGTTTGTCATCATCAAAAAG+GGG - Chr5:42709986-42710005 MsG0580026710.01.T01:CDS 35.0%
GTACTCAAACCTTCCAATTT+GGG + Chr5:42707086-42707105 None:intergenic 35.0%
GTCCAAATTCTACAAGTAGT+TGG - Chr5:42707230-42707249 MsG0580026710.01.T01:intron 35.0%
TACAACAGCAAAGGAAACAT+GGG + Chr5:42708750-42708769 None:intergenic 35.0%
TAGCTCTTGATACCATTTGA+TGG - Chr5:42709056-42709075 MsG0580026710.01.T01:intron 35.0%
TATGAAGTGCATGCTAGAAT+TGG + Chr5:42708311-42708330 None:intergenic 35.0%
TATGGTACTAATGCATTTGG+TGG - Chr5:42708240-42708259 MsG0580026710.01.T01:intron 35.0%
TCTTATTGTTCTGTGCAGAT+GGG - Chr5:42707648-42707667 MsG0580026710.01.T01:intron 35.0%
TGCTGAAGAAGATACAAAAG+AGG - Chr5:42709391-42709410 MsG0580026710.01.T01:CDS 35.0%
TGGGGTGCAAAATTTAGAAA+AGG + Chr5:42707379-42707398 None:intergenic 35.0%
TGTACTCAAACCTTCCAATT+TGG + Chr5:42707087-42707106 None:intergenic 35.0%
TGTGAGTTAGTATATCATCG+GGG + Chr5:42706570-42706589 None:intergenic 35.0%
TTAGAGAACAAGCGATCTAT+TGG + Chr5:42706487-42706506 None:intergenic 35.0%
TTCTTATTGTTCTGTGCAGA+TGG - Chr5:42707647-42707666 MsG0580026710.01.T01:intron 35.0%
TTGCTTAACATGTGCCTTTA+GGG + Chr5:42709568-42709587 None:intergenic 35.0%
! AAGTGTTTTGCAGCAGAATA+TGG + Chr5:42706926-42706945 None:intergenic 35.0%
! ACATTATAGAGTGCTCTGAA+CGG + Chr5:42707212-42707231 None:intergenic 35.0%
! AGAGCTAAGTTGAACTAAGA+TGG + Chr5:42709043-42709062 None:intergenic 35.0%
! ATTTGTTGGAGTCTCCAATT+TGG - Chr5:42709154-42709173 MsG0580026710.01.T01:intron 35.0%
! GAACTATGTTTAAAACGCAG+TGG + Chr5:42708952-42708971 None:intergenic 35.0%
! GATGAATGCAAGACTTTTAC+AGG - Chr5:42708080-42708099 MsG0580026710.01.T01:intron 35.0%
! TATGGCTGATTGTGTTACTA+TGG - Chr5:42706822-42706841 MsG0580026710.01.T01:intron 35.0%
! TCATTGCTTGAGTTAGTTCT+AGG - Chr5:42708628-42708647 MsG0580026710.01.T01:intron 35.0%
! TCTCCAATTTGGAATTCTCT+AGG - Chr5:42709165-42709184 MsG0580026710.01.T01:intron 35.0%
! TGCCGATGGAATTTTAAACA+AGG + Chr5:42706899-42706918 None:intergenic 35.0%
!! AATGTTAACTTGTGCCCTTA+AGG + Chr5:42709708-42709727 None:intergenic 35.0%
!! ACTCATTAACTTGTGCCTTA+AGG - Chr5:42709690-42709709 MsG0580026710.01.T01:CDS 35.0%
!! CTCATTAACTTGTGCCTTAA+GGG - Chr5:42709691-42709710 MsG0580026710.01.T01:CDS 35.0%
!! GATTAGAGACTTGCTGAAAT+TGG - Chr5:42708992-42709011 MsG0580026710.01.T01:intron 35.0%
!! GGGTGCTTTCTATTTCTTTT+AGG + Chr5:42708131-42708150 None:intergenic 35.0%
!! TGCTTGAGTTGAACAAAATG+TGG - Chr5:42708523-42708542 MsG0580026710.01.T01:CDS 35.0%
!! TTTCTTTTAGGTGAAGGGTA+CGG + Chr5:42708119-42708138 None:intergenic 35.0%
!!! AGAATTAGGGTTTTGAGCAA+TGG + Chr5:42707009-42707028 None:intergenic 35.0%
!!! CCTGTTGTTTTTGAAGAAGA+AGG + Chr5:42706443-42706462 None:intergenic 35.0%
!!! TTTTGATGATGTCAAAAGGG+GGG - Chr5:42709846-42709865 MsG0580026710.01.T01:CDS 35.0%
AAATGGACAGCTCATGCTAA+TGG + Chr5:42709252-42709271 None:intergenic 40.0%
AACTAACAGCCCTCAGAATT+AGG + Chr5:42707023-42707042 None:intergenic 40.0%
AAGGGGGAGATATACAAGAT+AGG - Chr5:42709927-42709946 MsG0580026710.01.T01:CDS 40.0%
AATCTCTCCCACTTGTAAGA+TGG - Chr5:42708182-42708201 MsG0580026710.01.T01:intron 40.0%
AATGGACAGCTCATGCTAAT+GGG + Chr5:42709251-42709270 None:intergenic 40.0%
ACAATTGCTTTACCAAGCAG+CGG + Chr5:42708427-42708446 None:intergenic 40.0%
ACTAACAGCCCTCAGAATTA+GGG + Chr5:42707022-42707041 None:intergenic 40.0%
AGTCCAATATAGTCGAAGGT+CGG + Chr5:42707739-42707758 None:intergenic 40.0%
ATTCTGCTGCAAAACACTTG+TGG - Chr5:42706927-42706946 MsG0580026710.01.T01:intron 40.0%
ATTTCCTTCTTAGACTTGGC+TGG - Chr5:42710023-42710042 MsG0580026710.01.T01:CDS 40.0%
CACAAGTCCAATATAGTCGA+AGG + Chr5:42707743-42707762 None:intergenic 40.0%
CCCCAACTACTTGTAGAATT+TGG + Chr5:42707235-42707254 None:intergenic 40.0%
CTACAACAGCAAAGGAAACA+TGG + Chr5:42708751-42708770 None:intergenic 40.0%
GACAAGTTCATCAACCAAAG+CGG - Chr5:42707945-42707964 MsG0580026710.01.T01:intron 40.0%
GCCATGATCAACTTAGTTAG+GGG + Chr5:42707167-42707186 None:intergenic 40.0%
GCTCAAAACCCTAATTCTGA+GGG - Chr5:42707011-42707030 MsG0580026710.01.T01:intron 40.0%
GGATTCATGAAACTCCTTTC+TGG - Chr5:42707056-42707075 MsG0580026710.01.T01:intron 40.0%
GGCCATGATCAACTTAGTTA+GGG + Chr5:42707168-42707187 None:intergenic 40.0%
GTCGGTTAAGTTTCCAAACA+CGG + Chr5:42707721-42707740 None:intergenic 40.0%
GTTCATACTTCCGTCATTTG+TGG - Chr5:42708560-42708579 MsG0580026710.01.T01:intron 40.0%
TAACCGACCTTCGACTATAT+TGG - Chr5:42707733-42707752 MsG0580026710.01.T01:intron 40.0%
TAATCCACCTGCTAATAACG+AGG + Chr5:42707459-42707478 None:intergenic 40.0%
TACAAGTGGGAGAGATTGTA+TGG + Chr5:42708179-42708198 None:intergenic 40.0%
TAGATCGCTTGTTCTCTAAG+AGG - Chr5:42706488-42706507 MsG0580026710.01.T01:CDS 40.0%
TCAATTGCCTCGTTATTAGC+AGG - Chr5:42707449-42707468 MsG0580026710.01.T01:intron 40.0%
TCGGTTAAGTTTCCAAACAC+GGG + Chr5:42707720-42707739 None:intergenic 40.0%
TGAGCAACAACACTAACAAG+TGG + Chr5:42708480-42708499 None:intergenic 40.0%
TGCGAATCGAAAATCAGCTT+CGG + Chr5:42708049-42708068 None:intergenic 40.0%
TGCTCAAAACCCTAATTCTG+AGG - Chr5:42707010-42707029 MsG0580026710.01.T01:intron 40.0%
TGGATATTTCCAATCCGCTT+TGG + Chr5:42707962-42707981 None:intergenic 40.0%
TTCAAAAACAACAGGATCGG+CGG - Chr5:42706448-42706467 MsG0580026710.01.T01:CDS 40.0%
TTCATGAATCCACTGTATCG+TGG + Chr5:42707047-42707066 None:intergenic 40.0%
TTCCCTATATTTCGACCCTT+TGG - Chr5:42709804-42709823 MsG0580026710.01.T01:CDS 40.0%
TTTCCTTCTTAGACTTGGCT+GGG - Chr5:42710024-42710043 MsG0580026710.01.T01:CDS 40.0%
! AGAACTCATTCCTCCTGTTT+TGG - Chr5:42709418-42709437 MsG0580026710.01.T01:CDS 40.0%
! GTTTTGCAGCAGAATATGGT+AGG + Chr5:42706922-42706941 None:intergenic 40.0%
! TGTTAGTTTCCACGATACAG+TGG - Chr5:42707035-42707054 MsG0580026710.01.T01:intron 40.0%
!! ACCCCTAACTAAGTTGATCA+TGG - Chr5:42707163-42707182 MsG0580026710.01.T01:intron 40.0%
!! CATGTTAACTTGTGCCCTAA+AGG - Chr5:42709551-42709570 MsG0580026710.01.T01:intron 40.0%
!! TTTGATGATGTCAAAAGGGG+GGG - Chr5:42709847-42709866 MsG0580026710.01.T01:CDS 40.0%
AAACCCAGCCAAGTCTAAGA+AGG + Chr5:42710030-42710049 None:intergenic 45.0%
AGACGAAACGCAACACATTC+AGG + Chr5:42707994-42708013 None:intergenic 45.0%
ATGGCAGCAAATTCAAGCAC+AGG + Chr5:42709024-42709043 None:intergenic 45.0%
ATTGCCTCGTTATTAGCAGG+TGG - Chr5:42707452-42707471 MsG0580026710.01.T01:intron 45.0%
CCTTTCTGGATGTCCCAAAT+TGG - Chr5:42707070-42707089 MsG0580026710.01.T01:intron 45.0%
GAAGTGCATGCTAGAATTGG+AGG + Chr5:42708308-42708327 None:intergenic 45.0%
GGCCCACATATGTTTATTCG+AGG - Chr5:42707184-42707203 MsG0580026710.01.T01:intron 45.0%
GGGCCATGATCAACTTAGTT+AGG + Chr5:42707169-42707188 None:intergenic 45.0%
GGGGAGATATACAAGATAGG+AGG - Chr5:42709930-42709949 MsG0580026710.01.T01:CDS 45.0%
GTTCATCAACCAAAGCGGAT+TGG - Chr5:42707950-42707969 MsG0580026710.01.T01:intron 45.0%
TACAAAGGACTTCCCGTGTT+TGG - Chr5:42707705-42707724 MsG0580026710.01.T01:intron 45.0%
TCTGGATGTCCCAAATTGGA+AGG - Chr5:42707074-42707093 MsG0580026710.01.T01:intron 45.0%
TGAGATTCATGATTGGGACG+AGG - Chr5:42707770-42707789 MsG0580026710.01.T01:intron 45.0%
TGTCGATATCAGAGAGTGAG+TGG + Chr5:42706663-42706682 None:intergenic 45.0%
! CCAATTTGGGACATCCAGAA+AGG + Chr5:42707073-42707092 None:intergenic 45.0%
! GTTCTGAACGCGTCTTTGAT+TGG + Chr5:42706607-42706626 None:intergenic 45.0%
! TAAAGGCGTGAAATGTGCAG+AGG - Chr5:42706690-42706709 MsG0580026710.01.T01:intron 45.0%
! TATGTTTTCCGCACGTTCTC+AGG - Chr5:42706747-42706766 MsG0580026710.01.T01:intron 45.0%
!!! CAGCTCATGCTAATGGGTTT+TGG + Chr5:42709245-42709264 None:intergenic 45.0%
!!! CTCCCCCTTTGTTTTGCAAT+TGG + Chr5:42709916-42709935 None:intergenic 45.0%
!! AATATATATTAAATTGAAAT+TGG + Chr5:42709305-42709324 None:intergenic 5.0%
AATCAGCCATAGCCTCCCAT+TGG + Chr5:42706813-42706832 None:intergenic 50.0%
AGTGGGAGAGATTGTATGGC+AGG + Chr5:42708175-42708194 None:intergenic 50.0%
CTACCGTTCTCTCGAAGAGA+TGG - Chr5:42706626-42706645 MsG0580026710.01.T01:intron 50.0%
GAGCCATCTCTTCGAGAGAA+CGG + Chr5:42706632-42706651 None:intergenic 50.0%
GATACTGTCCTGAGAACGTG+CGG + Chr5:42706758-42706777 None:intergenic 50.0%
TCAGAGAGTGAGTGGCACAA+CGG + Chr5:42706655-42706674 None:intergenic 50.0%
! ACACCGGCATTTGCTACACA+AGG + Chr5:42707122-42707141 None:intergenic 50.0%
! CAAGTGTCGTTCCAGCCAAT+GGG - Chr5:42706795-42706814 MsG0580026710.01.T01:intron 50.0%
! GAGCCTTGTGTAGCAAATGC+CGG - Chr5:42707116-42707135 MsG0580026710.01.T01:intron 50.0%
! TCAAGTGTCGTTCCAGCCAA+TGG - Chr5:42706794-42706813 MsG0580026710.01.T01:intron 50.0%
!! CAGAATATGGTAGGTGCCGA+TGG + Chr5:42706913-42706932 None:intergenic 50.0%
AGCAAATGCCGGTGTTCCAG+CGG - Chr5:42707127-42707146 MsG0580026710.01.T01:intron 55.0%
CAGAGAGTGAGTGGCACAAC+GGG + Chr5:42706654-42706673 None:intergenic 55.0%
GGGAGAGATTGTATGGCAGG+AGG + Chr5:42708172-42708191 None:intergenic 55.0%
TTCCAGCCAATGGGAGGCTA+TGG - Chr5:42706804-42706823 MsG0580026710.01.T01:intron 55.0%
! TAGGTGAAGGGTACGGCGAA+TGG + Chr5:42708112-42708131 None:intergenic 55.0%
AATGCCGGTGTTCCAGCGGA+AGG - Chr5:42707131-42707150 MsG0580026710.01.T01:intron 60.0%
AGCCATAGCCTCCCATTGGC+TGG + Chr5:42706809-42706828 None:intergenic 60.0%
ATGCCGGTGTTCCAGCGGAA+GGG - Chr5:42707132-42707151 MsG0580026710.01.T01:intron 60.0%
GCAGCGGCAGTGGTATGAAG+TGG + Chr5:42708405-42708424 None:intergenic 60.0%
GCTTTACCAAGCAGCGGCAG+CGG + Chr5:42708421-42708440 None:intergenic 60.0%
GGTTTGATGCACCCTTCCGC+TGG + Chr5:42707146-42707165 None:intergenic 60.0%
! GTGTCGTTCCAGCCAATGGG+AGG - Chr5:42706798-42706817 MsG0580026710.01.T01:intron 60.0%
GCACCCTTCCGCTGGAACAC+CGG + Chr5:42707138-42707157 None:intergenic 65.0%
CCAAGCAGCGGCAGCGGCAG+TGG + Chr5:42708415-42708434 None:intergenic 75.0%
CCACTGCCGCTGCCGCTGCT+TGG - Chr5:42708412-42708431 MsG0580026710.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr5 gene 42706385 42710129 42706385 ID=MsG0580026710.01;Name=MsG0580026710.01
Chr5 mRNA 42706385 42710129 42706385 ID=MsG0580026710.01.T01;Parent=MsG0580026710.01;Name=MsG0580026710.01.T01;_AED=0.28;_eAED=0.28;_QI=0|0|0|0.8|1|1|5|0|444
Chr5 exon 42709555 42710129 42709555 ID=MsG0580026710.01.T01:exon:13462;Parent=MsG0580026710.01.T01
Chr5 exon 42709261 42709459 42709261 ID=MsG0580026710.01.T01:exon:13461;Parent=MsG0580026710.01.T01
Chr5 exon 42708669 42708848 42708669 ID=MsG0580026710.01.T01:exon:13460;Parent=MsG0580026710.01.T01
Chr5 exon 42708413 42708571 42708413 ID=MsG0580026710.01.T01:exon:13459;Parent=MsG0580026710.01.T01
Chr5 exon 42706385 42706606 42706385 ID=MsG0580026710.01.T01:exon:13458;Parent=MsG0580026710.01.T01
Chr5 CDS 42709555 42710129 42709555 ID=MsG0580026710.01.T01:cds;Parent=MsG0580026710.01.T01
Chr5 CDS 42709261 42709459 42709261 ID=MsG0580026710.01.T01:cds;Parent=MsG0580026710.01.T01
Chr5 CDS 42708669 42708848 42708669 ID=MsG0580026710.01.T01:cds;Parent=MsG0580026710.01.T01
Chr5 CDS 42708413 42708571 42708413 ID=MsG0580026710.01.T01:cds;Parent=MsG0580026710.01.T01
Chr5 CDS 42706385 42706606 42706385 ID=MsG0580026710.01.T01:cds;Parent=MsG0580026710.01.T01
Gene Sequence

>MsG0580026710.01.T01

ATGGAAAACGAAATTAGAAGTAAGAGGACTAAAACAAAATTAAATTGTTCGTTTCCCTTCTTCTTCAAAAACAACAGGATCGGCGGCATTTTTAAGCAACCAATAGATCGCTTGTTCTCTAAGAGGAATAAGATATCGCAGTCACAGTCAGCGACAGTAGAGAGCAAGAGCATCGATGACTTCCCCGATGATATACTAACTCACATAATCTCTTTTCTTCCAATCAAAGACGCGTTCAGAACTACCGTTCTCTCGAAGAGATGGCTCCCGTTGTGCCACTCACTCTCTGATATCGACATCGATGATAAAGGCGTGAAATGTGCAGAGGACTTGATTCAGTTCAGTCATATGATGAACGCTGTTATGTTTTCCGCACGTTCTCAGGACAGTATCCTCAAATCTTTTAAACTCAAGTGTCGTTCCAGCCAATGGGAGGCTATGGCTGATTGTGTTACTATGGACAAATGGCTCGAAGCAGCAAAACGAAGACGAGTCGAGTGTCTCAAACTATCCTTGTTTAAAATTCCATCGGCACCTACCATATTCTGCTGCAAAACACTTGTGGTTCTCATATTTGGATTCATGAAACTCCTTTCTGGATGTCCCAAATTGGAAGGTTTGAGTACATTTTTAGAAGAGCCTTGTGTAGCAAATGCCGGTGTTCCAGCGGAAGGGTGCATCAAACCCCTAACTAAGTTGATCATGGCCCACATATGTTTATTCGAGGTTCCGTTCAGAGCACTCTATAATGTCCAAATTCTACAAGTAGTTGGGATGGGAAAGATTCTTGACAATGAAGAAATCAATTCATATTACAAAGGACTTCCCGTGTTTGGAAACTTAACCGACCTTCGACTATATTGGACTTGTGAGATTTGTGAGATTCATGATTGGGACGAGGTAATGAAGATGCTACACAATTGTCCCAAACTTCAAGCTCTTAAAATTAAAAAGTCGACAAGTTCATCAACCAAAGCGGATTGGAAATATCCATATCATGTTCCTGAATGTGTTGCGTTTCGTCTTACAACATGTAGAATTGAAGACTATGAAGCTTCCGAAGCTGATTTTCGATTCGCAACATACATTTTGATGAATGCAAGACTTTTACAGGTTATCCAATTGCAAAACAAAGGGGGAGATATACAAGATAGGAGGAGTTTCAATGAGCAAACATTGTCAAAAGGATATGGTTTGTCATCATCAAAAAGGGGAGATTGTGAAGAAGATTTCCTTCTTAGACTTGGCTGGGTTTTGATGATAACAAACTCACATCACAAAAGAAGAAAAACTATATGGAGGCTCAAGTTGAAGAATGAAGATAATGGGACTTAG
Protein sequence

>MsG0580026710.01.T01

MENEIRSKRTKTKLNCSFPFFFKNNRIGGIFKQPIDRLFSKRNKISQSQSATVESKSIDDFPDDILTHIISFLPIKDAFRTTVLSKRWLPLCHSLSDIDIDDKGVKCAEDLIQFSHMMNAVMFSARSQDSILKSFKLKCRSSQWEAMADCVTMDKWLEAAKRRRVECLKLSLFKIPSAPTIFCCKTLVVLIFGFMKLLSGCPKLEGLSTFLEEPCVANAGVPAEGCIKPLTKLIMAHICLFEVPFRALYNVQILQVVGMGKILDNEEINSYYKGLPVFGNLTDLRLYWTCEICEIHDWDEVMKMLHNCPKLQALKIKKSTSSSTKADWKYPYHVPECVAFRLTTCRIEDYEASEADFRFATYILMNARLLQVIQLQNKGGDIQDRRSFNEQTLSKGYGLSSSKRGDCEEDFLLRLGWVLMITNSHHKRRKTIWRLKLKNEDNGT*