AlfalfaGEDB | MsG0580028521.01

M. sativa cultivar ZhongmuNo.1 / MsG0580028521.01

KEGG: -
GO: GO:0005515
PFAM: PF00646 PF08387

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580028521.01.T01	GAU44399.1	46.429	392	139	14	5	332	2	386	8.60E-89	281

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580028521.01.T01	Q56XW8	33.673	196	89	8	2	159	3	195	4.84E-15	79.3

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580028521.01.T01	A0A2Z6PGE1	46.429	392	139	14	5	332	2	386	4.11e-89	281

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI

Gene1	Gene2	Type
MsG0780038466.01	MsG0580028521.01	PPI
MsG0580028521.01	MsG0180005047.01	PPI
MsG0780037522.01	MsG0580028521.01	PPI
MsG0780038466.01	MsG0580028521.01	PPI
MsG0780038463.01	MsG0580028521.01	PPI
MsG0780037557.01	MsG0580028521.01	PPI
MsG0780036062.01	MsG0580028521.01	PPI
MsG0780037524.01	MsG0580028521.01	PPI
MsG0580028521.01	MsG0780037591.01	PPI
MsG0780037562.01	MsG0580028521.01	PPI
MsG0580028521.01	MsG0780037555.01	PPI
MsG0780037571.01	MsG0580028521.01	PPI
MsG0380012429.01	MsG0580028521.01	PPI
MsG0780038159.01	MsG0580028521.01	PPI
MsG0580028521.01	MsG0780038466.01	PPI
MsG0680032766.01	MsG0580028521.01	PPI
MsG0380017416.01	MsG0580028521.01	PPI
MsG0780038462.01	MsG0580028521.01	PPI
MsG0180005047.01	MsG0580028521.01	PPI
MsG0780037592.01	MsG0580028521.01	PPI
MsG0680033026.01	MsG0580028521.01	PPI
MsG0580028521.01	MsG0780037592.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580028521.01.T01	MTR_1g108820	43.511	393	151	8	2	331	1	385	8.60e-82	253
MsG0580028521.01.T01	MTR_5g073370	39.949	393	167	12	2	335	1	383	5.86e-69	221
MsG0580028521.01.T01	MTR_1g108800	40.369	379	139	10	2	331	1	341	9.57e-67	213
MsG0580028521.01.T01	MTR_5g073420	36.788	386	174	12	2	329	4	377	6.63e-55	184
MsG0580028521.01.T01	MTR_1089s0010	35.864	382	187	13	2	330	1	377	1.98e-54	182
MsG0580028521.01.T01	MTR_1g108820	46.352	233	84	4	2	197	1	229	1.45e-53	179
MsG0580028521.01.T01	MTR_1g085120	34.635	384	183	12	9	330	92	469	4.10e-53	182
MsG0580028521.01.T01	MTR_1g085120	34.635	384	183	12	9	330	167	544	1.01e-52	182
MsG0580028521.01.T01	MTR_5g058100	34.500	400	173	16	2	330	1	382	3.79e-51	174
MsG0580028521.01.T01	MTR_6g011460	33.668	398	176	14	3	330	40	419	1.92e-48	168
MsG0580028521.01.T01	MTR_6g040270	33.938	386	193	13	2	331	1	380	3.04e-47	164
MsG0580028521.01.T01	MTR_1g066830	32.216	388	201	13	2	330	1	385	2.96e-44	156
MsG0580028521.01.T01	MTR_5g058000	34.015	391	178	14	2	330	1	373	3.72e-44	155
MsG0580028521.01.T01	MTR_7g026500	31.910	398	189	13	2	329	7	392	1.91e-42	152
MsG0580028521.01.T01	MTR_5g073340	36.086	327	123	11	2	269	1	300	2.99e-42	149
MsG0580028521.01.T01	MTR_6g022500	32.474	388	186	12	8	331	100	475	4.84e-42	152
MsG0580028521.01.T01	MTR_7g055943	30.633	395	194	11	5	330	36	419	6.76e-40	145
MsG0580028521.01.T01	MTR_3g095600	33.828	337	155	12	8	323	3	292	3.91e-38	137
MsG0580028521.01.T01	MTR_5g045510	31.467	375	192	13	8	331	11	371	9.98e-38	139
MsG0580028521.01.T01	MTR_3g071850	30.233	387	200	15	8	328	23	405	1.27e-37	143
MsG0580028521.01.T01	MTR_7g033915	31.978	369	194	14	8	332	10	365	6.14e-36	134
MsG0580028521.01.T01	MTR_6g045333	27.861	402	208	11	3	332	55	446	5.80e-35	132
MsG0580028521.01.T01	MTR_4g039440	31.500	400	177	16	8	331	33	411	1.20e-34	131
MsG0580028521.01.T01	MTR_5g039490	30.295	373	201	12	5	331	16	375	5.73e-34	129
MsG0580028521.01.T01	MTR_2g036470	29.668	391	200	12	9	332	14	396	1.26e-33	128
MsG0580028521.01.T01	MTR_5g039450	30.400	375	190	12	5	329	2	355	4.80e-33	125
MsG0580028521.01.T01	MTR_0009s0080	30.337	356	173	10	11	299	20	367	9.32e-33	126
MsG0580028521.01.T01	MTR_5g007410	28.125	384	195	11	11	324	28	400	3.21e-32	125
MsG0580028521.01.T01	MTR_5g045170	28.718	390	196	11	11	332	16	391	1.26e-31	122
MsG0580028521.01.T01	MTR_7g033990	30.481	374	195	13	8	324	10	375	3.86e-31	122
MsG0580028521.01.T01	MTR_5g061680	33.022	321	129	11	3	268	5	294	5.51e-31	119
MsG0580028521.01.T01	MTR_1g085120	33.459	266	131	9	9	238	179	434	8.62e-31	121
MsG0580028521.01.T01	MTR_1g041245	29.219	397	185	13	8	330	10	384	1.14e-29	117
MsG0580028521.01.T01	MTR_6g044560	29.529	403	197	16	3	330	172	562	1.53e-29	119
MsG0580028521.01.T01	MTR_6g044572	29.397	398	194	16	8	330	1	386	2.77e-29	116
MsG0580028521.01.T01	MTR_6g022360	29.716	387	184	15	8	329	42	405	3.17e-27	110
MsG0580028521.01.T01	MTR_0543s0010	27.614	373	207	8	9	329	86	447	6.11e-26	107
MsG0580028521.01.T01	MTR_5g031970	27.419	372	201	9	4	332	11	356	1.08e-25	105
MsG0580028521.01.T01	MTR_3g108560	28.900	391	184	15	9	329	20	386	2.26e-25	105
MsG0580028521.01.T01	MTR_2g007450	26.747	415	213	11	4	332	11	420	5.23e-25	105
MsG0580028521.01.T01	MTR_3g107100	29.744	390	204	12	9	331	11	397	2.19e-24	102
MsG0580028521.01.T01	MTR_3g105060	29.810	369	201	14	8	329	13	370	1.07e-23	100
MsG0580028521.01.T01	MTR_7g056430	28.767	365	195	14	9	324	9	357	1.12e-23	102
MsG0580028521.01.T01	MTR_7g056420	28.767	365	195	14	9	324	9	357	1.17e-23	102
MsG0580028521.01.T01	MTR_7g032380	26.440	382	196	14	3	330	4	354	4.06e-23	98.6
MsG0580028521.01.T01	MTR_7g083740	26.064	376	197	12	8	329	16	364	1.24e-22	97.4
MsG0580028521.01.T01	MTR_3g099830	26.904	394	198	15	3	331	5	373	3.75e-22	96.3
MsG0580028521.01.T01	MTR_3g107120	27.941	408	197	14	9	336	9	399	6.52e-22	95.9
MsG0580028521.01.T01	MTR_6g022390	46.400	125	50	5	8	119	4	124	7.86e-22	90.5
MsG0580028521.01.T01	MTR_2g008310	26.400	375	220	12	8	331	1	370	1.22e-21	95.1
MsG0580028521.01.T01	MTR_0492s0020	26.796	362	202	8	9	318	86	436	1.43e-21	95.1
MsG0580028521.01.T01	MTR_7g088260	28.941	387	191	16	9	329	91	459	3.35e-21	94.4
MsG0580028521.01.T01	MTR_2g007400	25.871	402	218	14	4	331	7	402	4.62e-21	93.6
MsG0580028521.01.T01	MTR_7g115270	25.316	395	214	13	9	329	12	399	5.35e-21	93.2
MsG0580028521.01.T01	MTR_7g056287	26.020	392	194	16	9	329	3	369	1.38e-20	91.7
MsG0580028521.01.T01	MTR_7g034115	30.749	387	186	18	4	324	5	375	1.79e-20	91.7
MsG0580028521.01.T01	MTR_3g467400	27.559	381	197	14	9	329	3	364	2.23e-20	91.3
MsG0580028521.01.T01	MTR_6g022520	30.034	293	133	10	101	330	28	311	1.41e-19	88.2
MsG0580028521.01.T01	MTR_7g034110	27.095	358	183	15	8	322	10	332	2.07e-19	88.2
MsG0580028521.01.T01	MTR_7g114710	27.397	365	207	11	8	329	12	361	2.71e-19	88.2
MsG0580028521.01.T01	MTR_7g056277	25.765	392	195	16	9	329	259	625	4.85e-19	88.6
MsG0580028521.01.T01	MTR_3g023630	28.090	356	189	15	2	300	1	346	6.51e-19	87.0
MsG0580028521.01.T01	MTR_3g107160	27.551	392	192	14	9	329	10	380	6.70e-19	87.0
MsG0580028521.01.T01	MTR_2g008320	25.323	387	221	11	5	331	48	426	1.05e-18	87.0
MsG0580028521.01.T01	MTR_3g108150	28.061	392	191	14	9	329	13	384	1.14e-18	86.3
MsG0580028521.01.T01	MTR_7g075820	27.068	399	204	14	9	331	6	393	1.42e-18	86.3
MsG0580028521.01.T01	MTR_5g083890	27.763	371	186	13	9	299	6	374	1.47e-18	86.7
MsG0580028521.01.T01	MTR_7g056447	32.323	198	92	8	2	164	1	191	1.59e-18	84.7
MsG0580028521.01.T01	MTR_7g056433	26.329	395	197	15	9	329	12	386	2.19e-18	85.5
MsG0580028521.01.T01	MTR_5g063950	25.066	379	199	12	9	329	8	359	3.93e-18	84.7
MsG0580028521.01.T01	MTR_2g005990	25.481	416	198	15	5	331	2	394	1.11e-17	83.6
MsG0580028521.01.T01	MTR_2g007360	24.804	383	217	13	4	331	7	373	1.13e-17	83.6
MsG0580028521.01.T01	MTR_5g039470	26.190	336	176	10	25	296	1	328	1.31e-17	82.8
MsG0580028521.01.T01	MTR_3g036250	27.717	368	210	13	9	329	5	363	1.41e-17	83.2
MsG0580028521.01.T01	MTR_5g073400	35.766	137	54	6	75	182	1	132	7.94e-17	76.6
MsG0580028521.01.T01	MTR_3g095640	40.000	120	63	4	2	113	11	129	8.07e-17	77.4
MsG0580028521.01.T01	MTR_3g082890	25.436	401	203	14	9	329	97	481	1.25e-16	80.9
MsG0580028521.01.T01	MTR_0571s0010	53.012	83	34	2	9	87	32	113	2.11e-16	74.7
MsG0580028521.01.T01	MTR_3g108560	28.114	281	147	10	9	255	20	279	2.49e-15	75.9
MsG0580028521.01.T01	MTR_7g033945	37.681	138	72	5	8	139	10	139	3.43e-15	73.2
MsG0580028521.01.T01	MTR_7g034120	34.300	207	105	10	145	330	110	306	2.00e-14	73.2
MsG0580028521.01.T01	MTR_5g058350	29.630	189	81	5	2	162	1	165	4.56e-14	70.1
MsG0580028521.01.T01	MTR_8g077460	25.132	378	225	11	3	330	4	373	7.36e-14	72.0
MsG0580028521.01.T01	MTR_7g034090	25.212	353	185	10	9	329	4	309	9.94e-14	72.0
MsG0580028521.01.T01	MTR_6g061720	56.579	76	32	1	2	76	1	76	1.07e-13	65.9
MsG0580028521.01.T01	MTR_7g033940	36.364	110	67	1	8	117	93	199	1.17e-13	69.7
MsG0580028521.01.T01	MTR_3g087260	28.452	239	114	8	133	329	231	454	2.77e-13	70.9
MsG0580028521.01.T01	MTR_3g082890	38.655	119	61	3	9	124	17	126	1.21e-12	68.9
MsG0580028521.01.T01	MTR_4g032730	28.807	243	121	11	8	202	14	252	1.25e-12	68.9
MsG0580028521.01.T01	MTR_7g098590	49.231	65	33	0	2	66	11	75	9.39e-12	62.4
MsG0580028521.01.T01	MTR_3g114200	36.134	119	67	3	9	124	19	131	1.18e-11	62.8
MsG0580028521.01.T01	MTR_3g109982	33.149	181	87	5	9	159	13	189	1.58e-11	65.9
MsG0580028521.01.T01	MTR_3g110010	33.149	181	87	5	9	159	13	189	2.06e-11	65.5
MsG0580028521.01.T01	MTR_5g033200	35.714	140	67	7	182	301	12	148	2.09e-11	62.4
MsG0580028521.01.T01	MTR_8g445780	32.828	198	77	9	9	161	13	199	9.86e-11	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580028521.01.T01	AT1G48400	33.673	196	89	8	2	159	3	195	4.94e-16	79.3
MsG0580028521.01.T01	AT1G48400	33.673	196	89	8	2	159	3	195	4.96e-16	79.3
MsG0580028521.01.T01	AT1G64540	34.239	184	82	7	7	161	3	176	1.92e-15	77.4
MsG0580028521.01.T01	AT1G64540	34.239	184	82	7	7	161	3	176	1.92e-15	77.4
MsG0580028521.01.T01	AT3G59200	30.890	191	88	6	9	159	7	193	1.13e-12	69.3
MsG0580028521.01.T01	AT3G59200	30.890	191	88	6	9	159	7	193	1.15e-12	68.6
MsG0580028521.01.T01	AT1G47915	56.897	58	25	0	2	59	1	58	1.05e-11	60.5
MsG0580028521.01.T01	AT1G49610	31.447	159	88	5	8	162	25	166	4.42e-11	63.9

Find 63 sgRNAs with CRISPR-Local

Find 99 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AACATCACATTCATTGATTT+TGG	0.129558	5:+81787917	None:intergenic
AGTTGTGGCAAAAGCAAATT+TGG	0.235937	5:+81788487	None:intergenic
ATGCAATCCGAAACAAAATT+TGG	0.245907	5:+81787451	None:intergenic
TAGGTTTAAACCTCGACATT+AGG	0.289964	5:+81787880	None:intergenic
AATTTCAACAAGCTTCTTAA+TGG	0.292553	5:-81788050	MsG0580028521.01.T01:CDS
CAACATTGAAAGTTTACATT+TGG	0.307907	5:+81787243	None:intergenic
TCTTAATGGGTGTCCCGTTT+TGG	0.320017	5:-81788036	MsG0580028521.01.T01:CDS
TAAACTTTCAATGTTGGTTC+CGG	0.335296	5:-81787236	MsG0580028521.01.T01:CDS
AACATTTAAATGTAGATGTT+CGG	0.341255	5:-81787767	MsG0580028521.01.T01:intron
ACATTTAAATGTAGATGTTC+GGG	0.348162	5:-81787766	MsG0580028521.01.T01:intron
AGGTTTAAACCTCGACATTA+GGG	0.350740	5:+81787881	None:intergenic
ATTTCAACAAGCTTCTTAAT+GGG	0.381082	5:-81788049	MsG0580028521.01.T01:CDS
CAGTAGACAGAGATTTGTTA+TGG	0.384556	5:-81787480	MsG0580028521.01.T01:CDS
AACATTGAAAGTTTACATTT+GGG	0.394610	5:+81787244	None:intergenic
AACATTCAAATCTTCCAAAA+CGG	0.411190	5:+81788022	None:intergenic
AGAGATCAATTCTTATTTCA+AGG	0.416142	5:-81787729	MsG0580028521.01.T01:CDS
ATATGAGACAATATCTCATT+AGG	0.416423	5:+81788527	None:intergenic
AACTGTCAACGTTGTTGAAA+CGG	0.424056	5:+81788279	None:intergenic
GTAGATGTTCGGGATACTTC+CGG	0.431460	5:-81787756	MsG0580028521.01.T01:intron
AGAATTCAGCACCCATTGAT+AGG	0.438528	5:-81788562	MsG0580028521.01.T01:CDS
AGTGGAGAGTTGTGAATAAT+CGG	0.440665	5:+81788435	None:intergenic
GGCTCTGATCAACTTAGATA+AGG	0.444139	5:+81787938	None:intergenic
CAACTGTTCTCTCTAAAAGA+TGG	0.446262	5:-81788469	MsG0580028521.01.T01:CDS
TAAGTTGTTGATCCTATCAA+TGG	0.449568	5:+81788550	None:intergenic
TTGAAATAAGAATTGATCTC+TGG	0.451540	5:+81787731	None:intergenic
TGGCAAAAGCAAATTTGGTT+GGG	0.458262	5:+81788492	None:intergenic
TTACATTTGGGAGAAATCCT+TGG	0.460969	5:+81787256	None:intergenic
CAAATGTAAACTTTCAATGT+TGG	0.464443	5:-81787242	MsG0580028521.01.T01:CDS
ACATTCAAATCTTCCAAAAC+GGG	0.477439	5:+81788023	None:intergenic
ATCTTCATTACCCCTAAAAG+TGG	0.479784	5:+81787343	None:intergenic
AACTGTTCTCTCTAAAAGAT+GGG	0.481892	5:-81788468	MsG0580028521.01.T01:CDS
AGATAAACACCACTCAATGA+AGG	0.490604	5:+81788086	None:intergenic
GACATTAGGGATTGCTCTGA+AGG	0.491618	5:+81787894	None:intergenic
AATGTCTAGTGCCGCACTCC+AGG	0.493165	5:+81788315	None:intergenic
TCTCATCAAAACCTTTCGCC+TGG	0.495636	5:-81788333	MsG0580028521.01.T01:CDS
CTCTGCGCTCATATATCTGC+GGG	0.500833	5:-81788213	MsG0580028521.01.T01:intron
GTGGCAAAAGCAAATTTGGT+TGG	0.506774	5:+81788491	None:intergenic
CGTTGACAGTTGGATCCAAA+TGG	0.513901	5:-81788267	MsG0580028521.01.T01:CDS
GAGATCAATTCTTATTTCAA+GGG	0.519402	5:-81787728	MsG0580028521.01.T01:CDS
GCTCAATACCCTTCATTGAG+TGG	0.529553	5:-81788095	MsG0580028521.01.T01:CDS
AGTGACTGCATTGACAAATC+AGG	0.534841	5:-81787305	MsG0580028521.01.T01:CDS
TAAGAATTGATCTCTGGCTC+CGG	0.535074	5:+81787737	None:intergenic
ATGTCGAGGTTTAAACCTAT+CGG	0.544663	5:-81787876	MsG0580028521.01.T01:intron
CAACAGATTCATCGTCAAAG+TGG	0.554892	5:+81788417	None:intergenic
GTTTCAACAACGTTGACAGT+TGG	0.561470	5:-81788277	MsG0580028521.01.T01:CDS
TGGAGTGCGGCACTAGACAT+TGG	0.563430	5:-81788313	MsG0580028521.01.T01:CDS
AAGTTGTTGATCCTATCAAT+GGG	0.571057	5:+81788551	None:intergenic
AATGGCAAAACAACATCTTG+TGG	0.579538	5:-81788249	MsG0580028521.01.T01:CDS
TGACAAAGCTACAATAGCGA+AGG	0.579538	5:+81788378	None:intergenic
ATCATGTTCTCTACACTGCA+AGG	0.586703	5:-81787413	MsG0580028521.01.T01:CDS
TTGTGAATAATCGGTCGAGT+AGG	0.604765	5:+81788444	None:intergenic
GGCACTAGACATTGGAAGCA+AGG	0.605096	5:-81788305	MsG0580028521.01.T01:CDS
GATAAACACCACTCAATGAA+GGG	0.609874	5:+81788087	None:intergenic
CAGAGCAATCCCTAATGTCG+AGG	0.611357	5:-81787890	MsG0580028521.01.T01:CDS
AAAACCTTTCGCCTGGAGTG+CGG	0.626762	5:-81788326	MsG0580028521.01.T01:CDS
TCAATGAAGGGTATTGAGCA+AGG	0.629015	5:+81788099	None:intergenic
AGTGCCGCACTCCAGGCGAA+AGG	0.632023	5:+81788322	None:intergenic
TCATGTTCTCTACACTGCAA+GGG	0.638702	5:-81787412	MsG0580028521.01.T01:CDS
TCTCTGCGCTCATATATCTG+CGG	0.639003	5:-81788214	MsG0580028521.01.T01:CDS
AAAGCTACAATAGCGAAGGA+AGG	0.640377	5:+81788382	None:intergenic
ACTGTTCTCTCTAAAAGATG+GGG	0.679197	5:-81788467	MsG0580028521.01.T01:CDS
TGTTACAGTTCGTACACGAG+AGG	0.684053	5:-81787967	MsG0580028521.01.T01:CDS
AGTGTAGAGAACATGATCTG+AGG	0.762617	5:+81787419	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AGATATAAAAGTATAATTCA+AGG	+	Chr5:81788119-81788138	None:intergenic	15.0%
!!!	TTCAAATTTTGTTATTGAAA+AGG	-	Chr5:81788205-81788224	MsG0580028521.01.T01:intron	15.0%
!!	AACATTGAAAGTTTACATTT+GGG	+	Chr5:81788553-81788572	None:intergenic	20.0%
!!	AACATTTAAATGTAGATGTT+CGG	-	Chr5:81788027-81788046	MsG0580028521.01.T01:CDS	20.0%
!!	CAAAATAAGATTTGAAAAAC+AGG	+	Chr5:81788275-81788294	None:intergenic	20.0%
!!	TGGTGTTTATCTAAAAAATA+TGG	-	Chr5:81787719-81787738	MsG0580028521.01.T01:intron	20.0%
!!!	AATAACAAAATTTGAAGCTT+GGG	+	Chr5:81788201-81788220	None:intergenic	20.0%
!!!	ATTATATTTAAAACTTCGAC+AGG	+	Chr5:81787979-81787998	None:intergenic	20.0%
!!!	CTGTTTTTCAAATCTTATTT+TGG	-	Chr5:81788273-81788292	MsG0580028521.01.T01:CDS	20.0%
!!!	GAAATATCCAAATTTTGTTT+CGG	-	Chr5:81788336-81788355	MsG0580028521.01.T01:CDS	20.0%
!!!	TATAAAAGTATAATTCAAGG+TGG	+	Chr5:81788116-81788135	None:intergenic	20.0%
!	AACATTCAAATCTTCCAAAA+CGG	+	Chr5:81787775-81787794	None:intergenic	25.0%
!	AATTTCAACAAGCTTCTTAA+TGG	-	Chr5:81787744-81787763	MsG0580028521.01.T01:CDS	25.0%
!	ACATTTAAATGTAGATGTTC+GGG	-	Chr5:81788028-81788047	MsG0580028521.01.T01:CDS	25.0%
!	ATATGAGACAATATCTCATT+AGG	+	Chr5:81787270-81787289	None:intergenic	25.0%
!	ATTGGAAATCTGAAAAAACT+GGG	+	Chr5:81787617-81787636	None:intergenic	25.0%
!	ATTTCAACAAGCTTCTTAAT+GGG	-	Chr5:81787745-81787764	MsG0580028521.01.T01:CDS	25.0%
!	CAAATGTAAACTTTCAATGT+TGG	-	Chr5:81788552-81788571	MsG0580028521.01.T01:CDS	25.0%
!	CAACATTGAAAGTTTACATT+TGG	+	Chr5:81788554-81788573	None:intergenic	25.0%
!	TATTGGAAATCTGAAAAAAC+TGG	+	Chr5:81787618-81787637	None:intergenic	25.0%
!	TTGAAATAAGAATTGATCTC+TGG	+	Chr5:81788066-81788085	None:intergenic	25.0%
!!	AAGAATTATACTTTTGTCCA+AGG	-	Chr5:81788521-81788540	MsG0580028521.01.T01:CDS	25.0%
!!	AGAGATCAATTCTTATTTCA+AGG	-	Chr5:81788065-81788084	MsG0580028521.01.T01:CDS	25.0%
!!	ATAACAAAATTTGAAGCTTG+GGG	+	Chr5:81788200-81788219	None:intergenic	25.0%
!!	CAATAACAAAATTTGAAGCT+TGG	+	Chr5:81788202-81788221	None:intergenic	25.0%
!!	CTTTTATATCTTTCATCACA+TGG	-	Chr5:81788128-81788147	MsG0580028521.01.T01:intron	25.0%
!!	GAGATCAATTCTTATTTCAA+GGG	-	Chr5:81788066-81788085	MsG0580028521.01.T01:CDS	25.0%
!!!	AACATCACATTCATTGATTT+TGG	+	Chr5:81787880-81787899	None:intergenic	25.0%
	AAGTTGTTGATCCTATCAAT+GGG	+	Chr5:81787246-81787265	None:intergenic	30.0%
	ACATTCAAATCTTCCAAAAC+GGG	+	Chr5:81787774-81787793	None:intergenic	30.0%
	ATGCAATCCGAAACAAAATT+TGG	+	Chr5:81788346-81788365	None:intergenic	30.0%
	TAAGTTGTTGATCCTATCAA+TGG	+	Chr5:81787247-81787266	None:intergenic	30.0%
	TTTCAGATTTCCAATACTTG+TGG	-	Chr5:81787622-81787641	MsG0580028521.01.T01:intron	30.0%
!	AACTGTTCTCTCTAAAAGAT+GGG	-	Chr5:81787326-81787345	MsG0580028521.01.T01:CDS	30.0%
!!	TAAACTTTCAATGTTGGTTC+CGG	-	Chr5:81788558-81788577	MsG0580028521.01.T01:CDS	30.0%
!!	TGTGGTTCTAAAACTATGTA+GGG	-	Chr5:81787640-81787659	MsG0580028521.01.T01:intron	30.0%
!!	TTCTAAAACTATGTAGGGTA+CGG	-	Chr5:81787645-81787664	MsG0580028521.01.T01:intron	30.0%
!!	TTGTGGTTCTAAAACTATGT+AGG	-	Chr5:81787639-81787658	MsG0580028521.01.T01:intron	30.0%
!!!	AGTTTTAGAACCACAAGTAT+TGG	+	Chr5:81787635-81787654	None:intergenic	30.0%
	AACTGTCAACGTTGTTGAAA+CGG	+	Chr5:81787518-81787537	None:intergenic	35.0%
	AATGGCAAAACAACATCTTG+TGG	-	Chr5:81787545-81787564	MsG0580028521.01.T01:intron	35.0%
	ACAGGCACTCAAATAAACTA+AGG	+	Chr5:81788257-81788276	None:intergenic	35.0%
	AGATAAACACCACTCAATGA+AGG	+	Chr5:81787711-81787730	None:intergenic	35.0%
	AGGTTTAAACCTCGACATTA+GGG	+	Chr5:81787916-81787935	None:intergenic	35.0%
	AGTGGAGAGTTGTGAATAAT+CGG	+	Chr5:81787362-81787381	None:intergenic	35.0%
	AGTTGTGGCAAAAGCAAATT+TGG	+	Chr5:81787310-81787329	None:intergenic	35.0%
	ATCTTCATTACCCCTAAAAG+TGG	+	Chr5:81788454-81788473	None:intergenic	35.0%
	ATGTCGAGGTTTAAACCTAT+CGG	-	Chr5:81787918-81787937	MsG0580028521.01.T01:CDS	35.0%
	CCAATAAGTATCTTACCGAT+AGG	+	Chr5:81787936-81787955	None:intergenic	35.0%
	CCTATCGGTAAGATACTTAT+TGG	-	Chr5:81787933-81787952	MsG0580028521.01.T01:CDS	35.0%
	GATAAACACCACTCAATGAA+GGG	+	Chr5:81787710-81787729	None:intergenic	35.0%
	TAGGTTTAAACCTCGACATT+AGG	+	Chr5:81787917-81787936	None:intergenic	35.0%
	TGGCAAAAGCAAATTTGGTT+GGG	+	Chr5:81787305-81787324	None:intergenic	35.0%
	TTACATTTGGGAGAAATCCT+TGG	+	Chr5:81788541-81788560	None:intergenic	35.0%
!	ACTGTTCTCTCTAAAAGATG+GGG	-	Chr5:81787327-81787346	MsG0580028521.01.T01:CDS	35.0%
!	CAACTGTTCTCTCTAAAAGA+TGG	-	Chr5:81787325-81787344	MsG0580028521.01.T01:CDS	35.0%
!	TCTAAAACTATGTAGGGTAC+GGG	-	Chr5:81787646-81787665	MsG0580028521.01.T01:intron	35.0%
!!	AAAGGTTTTGATGAGATGAG+TGG	+	Chr5:81787457-81787476	None:intergenic	35.0%
!!	CAGTAGACAGAGATTTGTTA+TGG	-	Chr5:81788314-81788333	MsG0580028521.01.T01:CDS	35.0%
!!	TACAGAATGCACCACTTTTA+GGG	-	Chr5:81788440-81788459	MsG0580028521.01.T01:CDS	35.0%
!!	TCTTTTAGAGAGAACAGTTG+TGG	+	Chr5:81787325-81787344	None:intergenic	35.0%
!!	TTACAGAATGCACCACTTTT+AGG	-	Chr5:81788439-81788458	MsG0580028521.01.T01:CDS	35.0%
!!!	CAAGATGTTGTTTTGCCATT+TGG	+	Chr5:81787545-81787564	None:intergenic	35.0%
!!!	TTTTGGAATATGTGTTGCAG+TGG	-	Chr5:81788290-81788309	MsG0580028521.01.T01:CDS	35.0%
	AAAGCTACAATAGCGAAGGA+AGG	+	Chr5:81787415-81787434	None:intergenic	40.0%
	AGAATTCAGCACCCATTGAT+AGG	-	Chr5:81787232-81787251	MsG0580028521.01.T01:CDS	40.0%
	AGTGGAATGGGATAATGTAG+TGG	-	Chr5:81788158-81788177	MsG0580028521.01.T01:intron	40.0%
	AGTGTAGAGAACATGATCTG+AGG	+	Chr5:81788378-81788397	None:intergenic	40.0%
	ATCATGTTCTCTACACTGCA+AGG	-	Chr5:81788381-81788400	MsG0580028521.01.T01:CDS	40.0%
	CAACAGATTCATCGTCAAAG+TGG	+	Chr5:81787380-81787399	None:intergenic	40.0%
	GTGGCAAAAGCAAATTTGGT+TGG	+	Chr5:81787306-81787325	None:intergenic	40.0%
	GTTTCAACAACGTTGACAGT+TGG	-	Chr5:81787517-81787536	MsG0580028521.01.T01:CDS	40.0%
	TCATCACATGGACAATGTAG+TGG	-	Chr5:81788140-81788159	MsG0580028521.01.T01:intron	40.0%
	TCATGTTCTCTACACTGCAA+GGG	-	Chr5:81788382-81788401	MsG0580028521.01.T01:CDS	40.0%
	TGACAAAGCTACAATAGCGA+AGG	+	Chr5:81787419-81787438	None:intergenic	40.0%
	TTGTGAATAATCGGTCGAGT+AGG	+	Chr5:81787353-81787372	None:intergenic	40.0%
!	ACATGGACAATGTAGTGGAA+TGG	-	Chr5:81788145-81788164	MsG0580028521.01.T01:intron	40.0%
!	AGTGACTGCATTGACAAATC+AGG	-	Chr5:81788489-81788508	MsG0580028521.01.T01:CDS	40.0%
!	CATGGACAATGTAGTGGAAT+GGG	-	Chr5:81788146-81788165	MsG0580028521.01.T01:intron	40.0%
!	GGCTCTGATCAACTTAGATA+AGG	+	Chr5:81787859-81787878	None:intergenic	40.0%
!	TAAGAATTGATCTCTGGCTC+CGG	+	Chr5:81788060-81788079	None:intergenic	40.0%
!!	ACAGAATGCACCACTTTTAG+GGG	-	Chr5:81788441-81788460	MsG0580028521.01.T01:CDS	40.0%
!!	TCAATGAAGGGTATTGAGCA+AGG	+	Chr5:81787698-81787717	None:intergenic	40.0%
	AAAACTATGTAGGGTACGGG+TGG	-	Chr5:81787649-81787668	MsG0580028521.01.T01:intron	45.0%
	CGTTGACAGTTGGATCCAAA+TGG	-	Chr5:81787527-81787546	MsG0580028521.01.T01:CDS	45.0%
	GACATTAGGGATTGCTCTGA+AGG	+	Chr5:81787903-81787922	None:intergenic	45.0%
	GCTCAATACCCTTCATTGAG+TGG	-	Chr5:81787699-81787718	MsG0580028521.01.T01:intron	45.0%
	GTAGATGTTCGGGATACTTC+CGG	-	Chr5:81788038-81788057	MsG0580028521.01.T01:CDS	45.0%
	TCTCATCAAAACCTTTCGCC+TGG	-	Chr5:81787461-81787480	MsG0580028521.01.T01:CDS	45.0%
	TCTCTGCGCTCATATATCTG+CGG	-	Chr5:81787580-81787599	MsG0580028521.01.T01:intron	45.0%
	TGTTACAGTTCGTACACGAG+AGG	-	Chr5:81787827-81787846	MsG0580028521.01.T01:intron	45.0%
!!	TCTTAATGGGTGTCCCGTTT+TGG	-	Chr5:81787758-81787777	MsG0580028521.01.T01:intron	45.0%
	AAAACCTTTCGCCTGGAGTG+CGG	-	Chr5:81787468-81787487	MsG0580028521.01.T01:CDS	50.0%
	CAGAGCAATCCCTAATGTCG+AGG	-	Chr5:81787904-81787923	MsG0580028521.01.T01:CDS	50.0%
	CTCTGCGCTCATATATCTGC+GGG	-	Chr5:81787581-81787600	MsG0580028521.01.T01:intron	50.0%
	GGCACTAGACATTGGAAGCA+AGG	-	Chr5:81787489-81787508	MsG0580028521.01.T01:CDS	50.0%
	AATGTCTAGTGCCGCACTCC+AGG	+	Chr5:81787482-81787501	None:intergenic	55.0%
	TGGAGTGCGGCACTAGACAT+TGG	-	Chr5:81787481-81787500	MsG0580028521.01.T01:CDS	55.0%
	AGTGCCGCACTCCAGGCGAA+AGG	+	Chr5:81787475-81787494	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	81787225	81788591	81787225	ID=MsG0580028521.01;Name=MsG0580028521.01
Chr5	mRNA	81787225	81788591	81787225	ID=MsG0580028521.01.T01;Parent=MsG0580028521.01;Name=MsG0580028521.01.T01;_AED=0.15;_eAED=0.21;_QI=0\|0\|0\|1\|0.66\|0.5\|4\|0\|337
Chr5	exon	81788214	81788591	81788214	ID=MsG0580028521.01.T01:exon:33016;Parent=MsG0580028521.01.T01
Chr5	exon	81787877	81788126	81787877	ID=MsG0580028521.01.T01:exon:33015;Parent=MsG0580028521.01.T01
Chr5	exon	81787721	81787774	81787721	ID=MsG0580028521.01.T01:exon:33014;Parent=MsG0580028521.01.T01
Chr5	exon	81787225	81787556	81787225	ID=MsG0580028521.01.T01:exon:33013;Parent=MsG0580028521.01.T01
Chr5	CDS	81788214	81788591	81788214	ID=MsG0580028521.01.T01:cds;Parent=MsG0580028521.01.T01
Chr5	CDS	81787877	81788126	81787877	ID=MsG0580028521.01.T01:cds;Parent=MsG0580028521.01.T01
Chr5	CDS	81787721	81787774	81787721	ID=MsG0580028521.01.T01:cds;Parent=MsG0580028521.01.T01
Chr5	CDS	81787225	81787556	81787225	ID=MsG0580028521.01.T01:cds;Parent=MsG0580028521.01.T01

Gene Sequence

>MsG0580028521.01.T01

ATGATGGAGAATTCAGCACCCATTGATAGGATCAACAACTTACCTAATGAGATATTGTCTCATATACTCTCTCTTCTCCCAACCAAATTTGCTTTTGCCACAACTGTTCTCTCTAAAAGATGGGGCCTACTCGACCGATTATTCACAACTCTCCACTTTGACGATGAATCTGTTGTTGACATAGACGCCTTCCTTCGCTATTGTAGCTTTGTCAAAACAGTCATGCTCGCCACTCATCTCATCAAAACCTTTCGCCTGGAGTGCGGCACTAGACATTGGAAGCAAGGCAACCGTTTCAACAACGTTGACAGTTGGATCCAAATGGCAAAACAACATCTTGTGGAGAATATACAAATCTCTGCGCTCATATATCTGCGGATCTTCCTTGCTCAATACCCTTCATTGAGTGGTGTTTATCTAAAAAATATGGAGAATTTCAACAAGCTTCTTAATGGGTGTCCCGTTTTGGAAGATTTGAATGTTTATGTTCACTATATAGAAGCATCAGAGAAGAGTGTTACAGTTCGTACACGAGAGGTTAAAACCTTATCTAAGTTGATCAGAGCCAAAATCAATGAATGTGATGTTCCTTCAGAGCAATCCCTAATGTCGAGGTTTAAACCTATCGATGTTCGGGATACTTCCGGAGCCAGAGATCAATTCTTATTTCAAGGGTTTTCTTTTTATTTGAGTGCCTGTTTTTCAAATCTTATTTTGGAATATGTGTTGCAGTGGACAGTAGACAGAGATTTGTTATGGAAATATCCAAATTTTGTTTCGGATTGCATTTCGTCTCACCTCAGATCATGTTCTCTACACTGCAAGGGACACGTAGATGAACTTCGATTTGCAAAATATATTTTACAGAATGCACCACTTTTAGGGGTAATGAAGATCAAAATCATTGATGAAGTGACTGCATTGACAAATCAGGATGCTTTAGAAGAATTATACTTTTGTCCAAGGATTTCTCCCAAATGTAAACTTTCAATGTTGGTTCCGGATAGTTTCTAG

Protein sequence

>MsG0580028521.01.T01

MMENSAPIDRINNLPNEILSHILSLLPTKFAFATTVLSKRWGLLDRLFTTLHFDDESVVDIDAFLRYCSFVKTVMLATHLIKTFRLECGTRHWKQGNRFNNVDSWIQMAKQHLVENIQISALIYLRIFLAQYPSLSGVYLKNMENFNKLLNGCPVLEDLNVYVHYIEASEKSVTVRTREVKTLSKLIRAKINECDVPSEQSLMSRFKPIDVRDTSGARDQFLFQGFSFYLSACFSNLILEYVLQWTVDRDLLWKYPNFVSDCISSHLRSCSLHCKGHVDELRFAKYILQNAPLLGVMKIKIIDEVTALTNQDALEELYFCPRISPKCKLSMLVPDSF*