AlfalfaGEDB | MsG0580030026.01

M. sativa cultivar ZhongmuNo.1 / MsG0580030026.01

KEGG: -
GO: -
PFAM: PF08387

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580030026.01.T01	XP_024634209.1	62.903	248	83	3	1	246	169	409	6.28E-100	307

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580030026.01.T01	Q9LXJ7	27.737	274	156	8	4	245	150	413	1.01E-12	70.5

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580030026.01.T01	A0A396IRZ3	62.903	248	83	3	1	246	169	409	3.00e-100	307

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI

Gene1	Gene2	Type
MsG0680033026.01	MsG0580030026.01	PPI
MsG0780037557.01	MsG0580030026.01	PPI
MsG0580030026.01	MsG0780037555.01	PPI
MsG0780037591.01	MsG0580030026.01	PPI
MsG0780038466.01	MsG0580030026.01	PPI
MsG0780037571.01	MsG0580030026.01	PPI
MsG0680032766.01	MsG0580030026.01	PPI
MsG0780038463.01	MsG0580030026.01	PPI
MsG0580030026.01	MsG0780037591.01	PPI
MsG0780037555.01	MsG0580030026.01	PPI
MsG0380012429.01	MsG0580030026.01	PPI
MsG0380017416.01	MsG0580030026.01	PPI
MsG0780038159.01	MsG0580030026.01	PPI
MsG0180005047.01	MsG0580030026.01	PPI
MsG0780037592.01	MsG0580030026.01	PPI
MsG0780036062.01	MsG0580030026.01	PPI
MsG0780037524.01	MsG0580030026.01	PPI
MsG0780037562.01	MsG0580030026.01	PPI
MsG0780037522.01	MsG0580030026.01	PPI
MsG0780038462.01	MsG0580030026.01	PPI
MsG0780038466.01	MsG0580030026.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580030026.01.T01	MTR_6g045333	63.306	248	82	3	1	246	206	446	1.15e-101	303
MsG0580030026.01.T01	MTR_3g071850	62.917	240	80	3	1	238	169	401	2.49e-95	297
MsG0580030026.01.T01	MTR_3g071790	65.072	209	64	3	1	207	1	202	1.77e-81	243
MsG0580030026.01.T01	MTR_5g007410	51.220	246	109	3	1	243	168	405	1.17e-79	246
MsG0580030026.01.T01	MTR_5g045170	54.472	246	102	3	1	246	156	391	1.80e-79	244
MsG0580030026.01.T01	MTR_5g045510	52.459	244	91	3	1	244	152	370	2.62e-74	230
MsG0580030026.01.T01	MTR_2g036470	52.016	248	108	5	1	246	158	396	1.32e-70	221
MsG0580030026.01.T01	MTR_5g063950	46.371	248	113	6	1	243	127	359	9.63e-65	206
MsG0580030026.01.T01	MTR_5g039450	47.541	244	112	5	1	243	127	355	1.92e-63	202
MsG0580030026.01.T01	MTR_0009s0080	51.802	222	96	5	1	219	161	374	4.40e-60	195
MsG0580030026.01.T01	MTR_5g039470	49.048	210	102	3	1	210	124	328	5.17e-59	190
MsG0580030026.01.T01	MTR_5g039490	45.306	245	96	4	1	245	169	375	7.05e-57	186
MsG0580030026.01.T01	MTR_1g108800	45.817	251	100	7	5	244	115	340	2.06e-52	173
MsG0580030026.01.T01	MTR_1g059860	44.622	251	96	7	1	220	86	324	9.08e-52	171
MsG0580030026.01.T01	MTR_5g031970	42.400	250	102	7	1	246	145	356	6.30e-51	170
MsG0580030026.01.T01	MTR_1g108820	43.307	254	112	9	5	244	149	384	1.17e-49	167
MsG0580030026.01.T01	MTR_1g066830	41.564	243	129	5	6	245	154	386	2.09e-48	164
MsG0580030026.01.T01	MTR_6g040270	39.754	244	124	6	6	244	154	379	5.03e-48	163
MsG0580030026.01.T01	MTR_7g026500	42.975	242	122	6	5	245	168	394	5.82e-47	160
MsG0580030026.01.T01	MTR_5g024060	47.514	181	87	4	60	238	26	200	2.51e-46	155
MsG0580030026.01.T01	MTR_5g054920	42.857	189	94	3	26	213	2	177	4.35e-45	150
MsG0580030026.01.T01	MTR_1089s0010	39.431	246	120	7	7	245	155	378	5.46e-44	152
MsG0580030026.01.T01	MTR_5g058100	40.329	243	128	6	6	245	155	383	3.58e-43	150
MsG0580030026.01.T01	MTR_5g058000	39.095	243	124	6	6	245	153	374	1.67e-41	145
MsG0580030026.01.T01	MTR_5g073420	38.710	248	115	11	6	245	161	379	3.26e-40	142
MsG0580030026.01.T01	MTR_1g085120	38.750	240	139	4	6	245	239	470	9.09e-40	143
MsG0580030026.01.T01	MTR_1g085120	38.750	240	139	4	6	245	314	545	1.66e-39	143
MsG0580030026.01.T01	MTR_5g065100	38.000	250	104	6	1	246	147	349	2.31e-37	136
MsG0580030026.01.T01	MTR_7g034120	37.037	243	125	8	7	245	89	307	8.34e-37	132
MsG0580030026.01.T01	MTR_4g039440	36.475	244	143	6	6	245	176	411	1.98e-36	133
MsG0580030026.01.T01	MTR_7g055943	38.492	252	125	7	6	245	187	420	9.78e-36	131
MsG0580030026.01.T01	MTR_7g033915	35.743	249	136	7	1	246	138	365	1.29e-34	127
MsG0580030026.01.T01	MTR_6g022500	33.473	239	147	5	6	244	248	474	1.78e-33	126
MsG0580030026.01.T01	MTR_5g073370	39.252	214	102	9	7	213	155	347	1.74e-32	122
MsG0580030026.01.T01	MTR_5g073340	42.246	187	86	8	5	182	127	300	2.76e-32	120
MsG0580030026.01.T01	MTR_6g022520	34.685	222	136	5	25	245	99	312	1.10e-31	119
MsG0580030026.01.T01	MTR_7g075820	34.568	243	127	8	8	244	176	392	2.87e-31	119
MsG0580030026.01.T01	MTR_5g061410	44.937	158	76	3	1	158	124	270	5.09e-31	115
MsG0580030026.01.T01	MTR_5g024050	59.184	98	32	2	1	96	1	92	9.76e-31	110
MsG0580030026.01.T01	MTR_6g011460	36.475	244	135	6	6	245	193	420	6.72e-30	115
MsG0580030026.01.T01	MTR_7g033990	33.613	238	133	8	6	240	162	377	2.62e-29	114
MsG0580030026.01.T01	MTR_0543s0010	32.510	243	146	5	6	246	224	450	6.27e-29	113
MsG0580030026.01.T01	MTR_1377s0010	41.667	144	68	4	79	220	5	134	6.94e-29	106
MsG0580030026.01.T01	MTR_3g095630	38.857	175	93	5	64	237	15	176	1.47e-28	107
MsG0580030026.01.T01	MTR_5g044790	44.521	146	51	1	131	246	295	440	1.83e-28	112
MsG0580030026.01.T01	MTR_3g099830	33.205	259	130	11	1	244	142	372	4.03e-28	110
MsG0580030026.01.T01	MTR_3g109982	35.443	237	135	7	6	238	246	468	1.37e-27	111
MsG0580030026.01.T01	MTR_2g007400	31.783	258	130	9	5	244	172	401	2.75e-27	108
MsG0580030026.01.T01	MTR_1g041245	34.940	249	135	10	6	245	155	385	3.03e-27	108
MsG0580030026.01.T01	MTR_3g087260	33.197	244	146	4	6	246	228	457	7.22e-27	108
MsG0580030026.01.T01	MTR_7g098510	33.068	251	140	6	3	245	160	390	8.38e-27	107
MsG0580030026.01.T01	MTR_5g013500	31.518	257	149	8	3	245	121	364	1.26e-26	106
MsG0580030026.01.T01	MTR_7g098570	33.884	242	142	6	3	241	162	388	2.09e-26	107
MsG0580030026.01.T01	MTR_7g032380	32.129	249	119	10	2	245	152	355	2.14e-26	105
MsG0580030026.01.T01	MTR_7g007080	34.400	250	126	9	6	244	155	377	2.17e-26	105
MsG0580030026.01.T01	MTR_1g053025	29.839	248	148	8	5	243	156	386	2.26e-26	105
MsG0580030026.01.T01	MTR_3g108150	33.745	243	146	6	8	246	156	387	2.90e-26	105
MsG0580030026.01.T01	MTR_7g056433	33.333	243	145	7	6	245	160	388	3.12e-26	105
MsG0580030026.01.T01	MTR_2g007450	32.016	253	140	9	7	244	183	418	5.98e-26	105
MsG0580030026.01.T01	MTR_3g036250	31.837	245	126	8	6	243	153	363	1.10e-25	103
MsG0580030026.01.T01	MTR_3g107100	33.977	259	133	10	5	244	157	396	1.21e-25	103
MsG0580030026.01.T01	MTR_7g032370	34.538	249	131	11	2	245	130	351	1.82e-25	102
MsG0580030026.01.T01	MTR_1g108820	41.358	162	72	5	5	155	149	298	1.92e-25	102
MsG0580030026.01.T01	MTR_7g115270	30.290	241	160	6	5	243	165	399	2.55e-25	103
MsG0580030026.01.T01	MTR_5g008920	32.245	245	142	8	6	245	155	380	2.58e-25	102
MsG0580030026.01.T01	MTR_7g034115	33.645	214	119	7	6	213	155	351	3.02e-25	102
MsG0580030026.01.T01	MTR_6g022360	32.530	249	145	7	5	246	176	408	5.70e-25	102
MsG0580030026.01.T01	MTR_7g056277	33.061	245	135	6	6	245	407	627	6.58e-25	103
MsG0580030026.01.T01	MTR_5g033200	40.000	180	84	6	67	239	13	175	7.33e-25	97.4
MsG0580030026.01.T01	MTR_1g107385	32.794	247	133	8	8	244	198	421	1.17e-24	101
MsG0580030026.01.T01	MTR_5g008950	29.796	245	147	7	6	245	140	364	1.18e-24	100
MsG0580030026.01.T01	MTR_6g044572	33.603	247	122	8	6	245	176	387	1.66e-24	100
MsG0580030026.01.T01	MTR_3g108560	32.927	246	146	8	6	246	158	389	1.78e-24	100
MsG0580030026.01.T01	MTR_7g088260	30.992	242	151	6	6	245	234	461	2.43e-24	100
MsG0580030026.01.T01	MTR_3g107160	29.960	247	140	9	5	243	159	380	3.42e-24	99.8
MsG0580030026.01.T01	MTR_3g105060	32.780	241	134	7	6	245	159	372	3.63e-24	99.8
MsG0580030026.01.T01	MTR_2g008310	31.855	248	133	8	7	244	148	369	6.43e-24	99.4
MsG0580030026.01.T01	MTR_7g056287	32.000	250	131	5	6	245	151	371	9.16e-24	98.6
MsG0580030026.01.T01	MTR_6g044560	33.469	245	125	7	6	245	352	563	1.35e-23	99.4
MsG0580030026.01.T01	MTR_3g107120	31.174	247	137	8	5	243	167	388	1.40e-23	98.2
MsG0580030026.01.T01	MTR_0492s0020	31.140	228	139	5	6	231	224	435	1.45e-23	98.6
MsG0580030026.01.T01	MTR_2g007360	29.057	265	145	9	2	244	129	372	5.67e-23	96.3
MsG0580030026.01.T01	MTR_2g005990	31.076	251	134	10	8	244	168	393	7.44e-23	96.3
MsG0580030026.01.T01	MTR_7g098480	32.669	251	139	8	3	245	160	388	1.28e-22	96.3
MsG0580030026.01.T01	MTR_4g098590	31.579	228	130	9	5	224	156	365	9.46e-22	92.8
MsG0580030026.01.T01	MTR_2g008320	30.952	252	132	11	7	244	202	425	3.99e-21	91.7
MsG0580030026.01.T01	MTR_7g083740	31.020	245	141	7	8	245	143	366	5.48e-21	90.9
MsG0580030026.01.T01	MTR_7g056430	30.043	233	150	6	12	238	132	357	6.72e-21	92.0
MsG0580030026.01.T01	MTR_7g056420	30.043	233	150	6	12	238	132	357	7.61e-21	91.7
MsG0580030026.01.T01	MTR_7g056020	29.876	241	143	5	5	238	145	366	1.47e-20	90.5
MsG0580030026.01.T01	MTR_3g115430	35.433	127	77	2	121	245	1	124	1.76e-20	84.3
MsG0580030026.01.T01	MTR_2g007090	30.364	247	130	6	4	245	84	293	2.40e-20	87.8
MsG0580030026.01.T01	MTR_6g029350	34.234	222	104	13	34	244	6	196	3.32e-20	86.7
MsG0580030026.01.T01	MTR_5g083890	31.148	244	126	9	8	235	174	391	1.60e-19	87.4
MsG0580030026.01.T01	MTR_5g012840	32.877	219	120	9	2	218	99	292	1.99e-19	85.9
MsG0580030026.01.T01	MTR_3g026920	30.418	263	135	12	1	243	168	402	1.41e-18	84.3
MsG0580030026.01.T01	MTR_7g034090	37.162	148	77	6	104	245	174	311	5.59e-18	82.8
MsG0580030026.01.T01	MTR_3g023630	30.275	218	124	5	6	217	154	349	6.02e-18	82.4
MsG0580030026.01.T01	MTR_3g040700	29.952	207	109	7	6	206	191	367	6.84e-18	82.4
MsG0580030026.01.T01	MTR_4g080610	29.317	249	153	7	6	246	124	357	7.63e-18	82.0
MsG0580030026.01.T01	MTR_8g085430	40.179	112	56	3	110	214	190	297	1.84e-17	80.5
MsG0580030026.01.T01	MTR_7g007340	31.405	242	124	11	8	238	139	349	2.09e-17	80.9
MsG0580030026.01.T01	MTR_2g007500	30.928	194	109	8	6	188	151	330	3.69e-17	79.7
MsG0580030026.01.T01	MTR_7g021950	29.675	246	142	8	3	236	189	415	1.09e-16	79.3
MsG0580030026.01.T01	MTR_7g021990	29.675	246	142	8	3	236	189	415	1.15e-16	79.0
MsG0580030026.01.T01	MTR_7g022105	32.184	174	101	6	65	231	248	411	1.41e-16	78.6
MsG0580030026.01.T01	MTR_3g107940	39.231	130	62	4	114	238	88	205	2.43e-16	77.4
MsG0580030026.01.T01	MTR_1g085120	36.000	150	89	3	6	155	326	468	8.51e-16	76.6
MsG0580030026.01.T01	MTR_2g007550	32.370	173	90	6	81	243	177	332	8.58e-16	75.9
MsG0580030026.01.T01	MTR_3g106960	32.317	164	82	8	81	236	46	188	1.28e-15	73.9
MsG0580030026.01.T01	MTR_3g082890	35.664	143	85	3	107	245	344	483	1.48e-15	75.9
MsG0580030026.01.T01	MTR_5g076150	34.239	184	103	7	7	178	50	227	6.69e-15	72.0
MsG0580030026.01.T01	MTR_2g020180	35.075	134	75	3	113	245	92	214	1.44e-14	70.9
MsG0580030026.01.T01	MTR_2g007610	31.677	161	88	6	93	244	2	149	2.94e-14	68.9
MsG0580030026.01.T01	MTR_7g114710	27.530	247	130	7	6	245	159	363	5.72e-14	70.9
MsG0580030026.01.T01	MTR_7g081290	34.028	144	86	5	106	245	117	255	6.09e-14	69.7
MsG0580030026.01.T01	MTR_7g007370	32.420	219	115	8	6	214	123	318	8.71e-14	70.1
MsG0580030026.01.T01	MTR_3g467400	27.386	241	136	6	6	245	164	366	1.16e-13	70.1
MsG0580030026.01.T01	MTR_3g108140	42.857	84	48	0	163	246	65	148	1.24e-13	67.4
MsG0580030026.01.T01	MTR_6g022410	41.772	79	46	0	167	245	28	106	2.97e-13	64.7
MsG0580030026.01.T01	MTR_4g096730	48.276	58	29	1	166	223	12	68	1.98e-12	62.0
MsG0580030026.01.T01	MTR_6g033095	47.368	76	39	1	138	213	110	184	4.02e-12	63.5
MsG0580030026.01.T01	MTR_7g056280	29.167	144	82	4	109	243	438	570	1.15e-11	64.3
MsG0580030026.01.T01	MTR_7g075800	22.727	242	142	8	3	215	172	397	4.16e-11	62.8
MsG0580030026.01.T01	MTR_1g043170	35.802	81	49	1	165	245	10	87	4.98e-11	58.2
MsG0580030026.01.T01	MTR_5g084070	26.923	260	136	10	24	238	169	419	6.31e-11	62.0
MsG0580030026.01.T01	MTR_3g094980	31.068	103	66	1	135	232	34	136	9.24e-11	59.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580030026.01.T01	AT5G56570	26.446	242	154	6	5	245	220	438	1.52e-13	70.1

Find 36 sgRNAs with CRISPR-Local

Find 63 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TAATTGAACTTCGACTATTT+TGG	0.213375	5:-105385165	MsG0580030026.01.T01:CDS
ACACATTCTGGCACATGATA+TGG	0.281045	5:+105384916	None:intergenic
ATGGAAAGTGCTCGAAGTTT+AGG	0.314638	5:+105385082	None:intergenic
GATTTAAAGAAACTTATCTA+TGG	0.343364	5:-105385784	MsG0580030026.01.T01:CDS
ATGGCACTCGTGACTTGATC+TGG	0.345154	5:-105385135	MsG0580030026.01.T01:CDS
ATATGAATTGATTTCTTGAT+TGG	0.350389	5:+105385216	None:intergenic
ATGTTCTGTTGATCTTCCTT+TGG	0.361838	5:-105385851	MsG0580030026.01.T01:CDS
GCTTCGATCAACTTGGATAA+GGG	0.376044	5:+105385664	None:intergenic
AGCTTCGATCAACTTGGATA+AGG	0.387604	5:+105385663	None:intergenic
GAAGTGGAACCTCGAATAAA+CGG	0.434734	5:+105385635	None:intergenic
AGCTAATATCCGTTTATTCG+AGG	0.448079	5:-105385644	MsG0580030026.01.T01:CDS
CAGACAGAGGCAGAGATGAT+TGG	0.448621	5:-105384945	MsG0580030026.01.T01:CDS
TATGAATTGATTTCTTGATT+GGG	0.476154	5:+105385217	None:intergenic
AGACGAGACGAAACACATTC+TGG	0.483937	5:+105384904	None:intergenic
TGACAACCAAACCTTTGTAA+TGG	0.485445	5:+105385063	None:intergenic
TCATCTCTGCCTCTGTCTGA+TGG	0.491530	5:+105384949	None:intergenic
GATATTAGCTTCGATCAACT+TGG	0.497453	5:+105385657	None:intergenic
AATCCTCCACATGATTCAAA+CGG	0.507514	5:+105385803	None:intergenic
TGGCACTCGTGACTTGATCT+GGG	0.531487	5:-105385134	MsG0580030026.01.T01:CDS
AGTGCCGGTGGTATTACAGC+TGG	0.535042	5:-105385700	MsG0580030026.01.T01:CDS
AAGATTTACCCTCTTGTCCA+AGG	0.536227	5:-105384735	MsG0580030026.01.T01:CDS
ATTTAAAGAAACTTATCTAT+GGG	0.538860	5:-105385783	MsG0580030026.01.T01:CDS
AACGGACATCAATGAGACTC+AGG	0.547039	5:+105385821	None:intergenic
AGAGAGATCCTTGGACAAGA+GGG	0.579059	5:+105384727	None:intergenic
ACATTAGAAAATGCTCGAAG+TGG	0.583751	5:+105385619	None:intergenic
GAGAGAGATCCTTGGACAAG+AGG	0.586156	5:+105384726	None:intergenic
TGATGTCCGTTTGAATCATG+TGG	0.597596	5:-105385809	MsG0580030026.01.T01:CDS
TCGAGCACTTTCCATTACAA+AGG	0.598626	5:-105385074	MsG0580030026.01.T01:intron
ACCTCCAGCTGTAATACCAC+CGG	0.601508	5:+105385696	None:intergenic
GAAATCAATTCATATTACAA+AGG	0.605211	5:-105385208	MsG0580030026.01.T01:CDS
GAAATTTCTAACTGTAACCG+AGG	0.605965	5:-105385596	MsG0580030026.01.T01:intron
TTACATACGAGAGAGATCCT+TGG	0.634759	5:+105384718	None:intergenic
GCCGGTGGTATTACAGCTGG+AGG	0.635486	5:-105385697	MsG0580030026.01.T01:CDS
ACGGACATCAATGAGACTCA+GGG	0.667661	5:+105385822	None:intergenic
TGTCCGTTTGAATCATGTGG+AGG	0.671150	5:-105385806	MsG0580030026.01.T01:CDS
CAGACGATTCCATCAGACAG+AGG	0.724121	5:-105384958	MsG0580030026.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATTTAAAGAAACTTATCTAT+GGG	-	Chr5:105384778-105384797	MsG0580030026.01.T01:CDS	15.0%
!!	TTAAATAAATCAATCAAAAC+AGG	+	Chr5:105385019-105385038	None:intergenic	15.0%
!!!	ATTTTCAAATCTTCTAAAAT+GGG	+	Chr5:105384807-105384826	None:intergenic	15.0%
!!!	TATTTTCAAATCTTCTAAAA+TGG	+	Chr5:105384808-105384827	None:intergenic	15.0%
!!!	TTTACAAAATGTATATTTTC+AGG	-	Chr5:105384836-105384855	MsG0580030026.01.T01:CDS	15.0%
!!	GAAATCAATTCATATTACAA+AGG	-	Chr5:105385353-105385372	MsG0580030026.01.T01:intron	20.0%
!!	GATTTAAAGAAACTTATCTA+TGG	-	Chr5:105384777-105384796	MsG0580030026.01.T01:CDS	20.0%
!!!	AGGGTAAATCTTTAAAAAAT+TGG	+	Chr5:105385818-105385837	None:intergenic	20.0%
!!!	ATATGAATTGATTTCTTGAT+TGG	+	Chr5:105385348-105385367	None:intergenic	20.0%
!!!	GGGTAAATCTTTAAAAAATT+GGG	+	Chr5:105385817-105385836	None:intergenic	20.0%
!!!	GGTAAATCTTTAAAAAATTG+GGG	+	Chr5:105385816-105385835	None:intergenic	20.0%
!!!	TATGAATTGATTTCTTGATT+GGG	+	Chr5:105385347-105385366	None:intergenic	20.0%
!!!	TCAATTAAGTTTTCAAACAT+GGG	+	Chr5:105385383-105385402	None:intergenic	20.0%
!!!	TTCAATTAAGTTTTCAAACA+TGG	+	Chr5:105385384-105385403	None:intergenic	20.0%
!	ATATATGATATGATGCATCT+TGG	-	Chr5:105384992-105385011	MsG0580030026.01.T01:intron	25.0%
!	TATATGATATGATGCATCTT+GGG	-	Chr5:105384993-105385012	MsG0580030026.01.T01:intron	25.0%
!	TCATATCATATATCATACCT+CGG	+	Chr5:105384985-105385004	None:intergenic	25.0%
!!	TAATTGAACTTCGACTATTT+TGG	-	Chr5:105385396-105385415	MsG0580030026.01.T01:intron	25.0%
!!	TTATGTTGTTTATCCAAAGA+TGG	-	Chr5:105385239-105385258	MsG0580030026.01.T01:intron	25.0%
!	CTGACAACATGTACAATTTT+AGG	-	Chr5:105385678-105385697	MsG0580030026.01.T01:CDS	30.0%
!!!	CGACTATTTTGGTTTTATCA+TGG	-	Chr5:105385407-105385426	MsG0580030026.01.T01:intron	30.0%
	AATCCTCCACATGATTCAAA+CGG	+	Chr5:105384761-105384780	None:intergenic	35.0%
	ACATTAGAAAATGCTCGAAG+TGG	+	Chr5:105384945-105384964	None:intergenic	35.0%
	AGCTAATATCCGTTTATTCG+AGG	-	Chr5:105384917-105384936	MsG0580030026.01.T01:CDS	35.0%
	ATGTTCTGTTGATCTTCCTT+TGG	-	Chr5:105384710-105384729	MsG0580030026.01.T01:CDS	35.0%
	CAAAAGACATAGTCCATCTT+TGG	+	Chr5:105385255-105385274	None:intergenic	35.0%
	CACTTTCCATTACAAAGGTT+TGG	-	Chr5:105385492-105385511	MsG0580030026.01.T01:intron	35.0%
	GAAATTTCTAACTGTAACCG+AGG	-	Chr5:105384965-105384984	MsG0580030026.01.T01:intron	35.0%
	TGACAACCAAACCTTTGTAA+TGG	+	Chr5:105385501-105385520	None:intergenic	35.0%
!	AAAGGTTTGGTTGTCATAGA+TGG	-	Chr5:105385505-105385524	MsG0580030026.01.T01:intron	35.0%
!	AATTTTAGGCTATCATGCTC+TGG	-	Chr5:105385692-105385711	MsG0580030026.01.T01:CDS	35.0%
!	GATATTAGCTTCGATCAACT+TGG	+	Chr5:105384907-105384926	None:intergenic	35.0%
!!!	AGATGGACTATGTCTTTTGT+CGG	-	Chr5:105385256-105385275	MsG0580030026.01.T01:intron	35.0%
!!!	TCTTCTTTTTTCGTGCAGAT+GGG	-	Chr5:105385311-105385330	MsG0580030026.01.T01:intron	35.0%
!!!	TTCTTCTTTTTTCGTGCAGA+TGG	-	Chr5:105385310-105385329	MsG0580030026.01.T01:intron	35.0%
	AAGATTTACCCTCTTGTCCA+AGG	-	Chr5:105385826-105385845	MsG0580030026.01.T01:CDS	40.0%
	AAGCTAACTCGATGTGTGTA+TGG	+	Chr5:105385132-105385151	None:intergenic	40.0%
	ACACATTCTGGCACATGATA+TGG	+	Chr5:105385648-105385667	None:intergenic	40.0%
	AGCTTCGATCAACTTGGATA+AGG	+	Chr5:105384901-105384920	None:intergenic	40.0%
	GAAGTGGAACCTCGAATAAA+CGG	+	Chr5:105384929-105384948	None:intergenic	40.0%
	GCTTCGATCAACTTGGATAA+GGG	+	Chr5:105384900-105384919	None:intergenic	40.0%
	TCGAGCACTTTCCATTACAA+AGG	-	Chr5:105385487-105385506	MsG0580030026.01.T01:intron	40.0%
	TGATGTCCGTTTGAATCATG+TGG	-	Chr5:105384752-105384771	MsG0580030026.01.T01:CDS	40.0%
	TTACATACGAGAGAGATCCT+TGG	+	Chr5:105385846-105385865	None:intergenic	40.0%
!!	ATGGAAAGTGCTCGAAGTTT+AGG	+	Chr5:105385482-105385501	None:intergenic	40.0%
!!	GTATATTTTCAGGCAAGTGC+CGG	-	Chr5:105384846-105384865	MsG0580030026.01.T01:CDS	40.0%
!!!	CTTCTTTTTTCGTGCAGATG+GGG	-	Chr5:105385312-105385331	MsG0580030026.01.T01:intron	40.0%
	AACGGACATCAATGAGACTC+AGG	+	Chr5:105384743-105384762	None:intergenic	45.0%
	ACGGACATCAATGAGACTCA+GGG	+	Chr5:105384742-105384761	None:intergenic	45.0%
	AGACGAGACGAAACACATTC+TGG	+	Chr5:105385660-105385679	None:intergenic	45.0%
	AGAGAGATCCTTGGACAAGA+GGG	+	Chr5:105385837-105385856	None:intergenic	45.0%
	TGTCCGTTTGAATCATGTGG+AGG	-	Chr5:105384755-105384774	MsG0580030026.01.T01:CDS	45.0%
!!	AGACTCAGGGTTTTGACCAA+AGG	+	Chr5:105384729-105384748	None:intergenic	45.0%
	ACCTCCAGCTGTAATACCAC+CGG	+	Chr5:105384868-105384887	None:intergenic	50.0%
	ATGGCACTCGTGACTTGATC+TGG	-	Chr5:105385426-105385445	MsG0580030026.01.T01:intron	50.0%
	CAGACAGAGGCAGAGATGAT+TGG	-	Chr5:105385616-105385635	MsG0580030026.01.T01:CDS	50.0%
	CAGACGATTCCATCAGACAG+AGG	-	Chr5:105385603-105385622	MsG0580030026.01.T01:CDS	50.0%
	GAGAGAGATCCTTGGACAAG+AGG	+	Chr5:105385838-105385857	None:intergenic	50.0%
	TCATCTCTGCCTCTGTCTGA+TGG	+	Chr5:105385615-105385634	None:intergenic	50.0%
	TGGCACTCGTGACTTGATCT+GGG	-	Chr5:105385427-105385446	MsG0580030026.01.T01:intron	50.0%
!!!	TATTTTCAGGCAAGTGCCGG+TGG	-	Chr5:105384849-105384868	MsG0580030026.01.T01:CDS	50.0%
!!	AGTGCCGGTGGTATTACAGC+TGG	-	Chr5:105384861-105384880	MsG0580030026.01.T01:CDS	55.0%
	GCCGGTGGTATTACAGCTGG+AGG	-	Chr5:105384864-105384883	MsG0580030026.01.T01:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	105384702	105385881	105384702	ID=MsG0580030026.01;Name=MsG0580030026.01
Chr5	mRNA	105384702	105385881	105384702	ID=MsG0580030026.01.T01;Parent=MsG0580030026.01;Name=MsG0580030026.01.T01;_AED=0.22;_eAED=0.22;_QI=0\|0\|0\|1\|1\|1\|3\|0\|246
Chr5	exon	105385597	105385881	105385597	ID=MsG0580030026.01.T01:exon:37059;Parent=MsG0580030026.01.T01
Chr5	exon	105385075	105385254	105385075	ID=MsG0580030026.01.T01:exon:37058;Parent=MsG0580030026.01.T01
Chr5	exon	105384702	105384977	105384702	ID=MsG0580030026.01.T01:exon:37057;Parent=MsG0580030026.01.T01
Chr5	CDS	105385597	105385881	105385597	ID=MsG0580030026.01.T01:cds;Parent=MsG0580030026.01.T01
Chr5	CDS	105385075	105385254	105385075	ID=MsG0580030026.01.T01:cds;Parent=MsG0580030026.01.T01
Chr5	CDS	105384702	105384977	105384702	ID=MsG0580030026.01.T01:cds;Parent=MsG0580030026.01.T01

Gene Sequence

>MsG0580030026.01.T01

ATGTTTCAATGTTCTGTTGATCTTCCTTTGGTCAAAACCCTGAGTCTCATTGATGTCCGTTTGAATCATGTGGAGGATTTAAAGAAACTTATCTATGGGTGTCCCATTTTAGAAGATTTGAAAATATCATGTGTTTTACAAAATGTATATTTTCAGGCAAGTGCCGGTGGTATTACAGCTGGAGGTTACTCTAAACCCTTATCCAAGTTGATCGAAGCTAATATCCGTTTATTCGAGGTTCCACTTCGAGCATTTTCTAATGTGAAATTTCTAACTGTAACCGAGATGGGGAAAATTCTTCCCAATCAAGAAATCAATTCATATTACAAAGGTTATCCCATGTTTGAAAACTTAATTGAACTTCGACTATTTTGGTTTTATCATGGCACTCGTGACTTGATCTGGGATGATGTAGTGAAAATGCTTCAAAATTGTCCTAAACTTCGAGCACTTTCCATTACAAAGACGATTCCATCAGACAGAGGCAGAGATGATTGGAAATATCCATATCATGTGCCAGAATGTGTTTCGTCTCGTCTGACAACATGTACAATTTTAGGCTATCATGCTCTGGAAGCTGATTTTCAATTTGCAAGATATATTTTGCAGAATGCAAGACTTTTACAAGTTATGACAATCAAATATAACTGCTCAGAATCAAAAGATCAGAGACCCCAATTTTTTAAAGATTTACCCTCTTGTCCAAGGATCTCTCTCGTATGTAAGCTGTCATTTATATGA

Protein sequence

>MsG0580030026.01.T01

MFQCSVDLPLVKTLSLIDVRLNHVEDLKKLIYGCPILEDLKISCVLQNVYFQASAGGITAGGYSKPLSKLIEANIRLFEVPLRAFSNVKFLTVTEMGKILPNQEINSYYKGYPMFENLIELRLFWFYHGTRDLIWDDVVKMLQNCPKLRALSITKTIPSDRGRDDWKYPYHVPECVSSRLTTCTILGYHALEADFQFARYILQNARLLQVMTIKYNCSESKDQRPQFFKDLPSCPRISLVCKLSFI*