Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030876.01.T03 | XP_013450993.1 | 93.458 | 642 | 40 | 2 | 1 | 641 | 1 | 641 | 0 | 1106 |
| MsG0680030876.01.T04 | XP_013450993.1 | 93.424 | 517 | 32 | 2 | 2 | 517 | 126 | 641 | 0 | 867 |
| MsG0680030876.01.T01 | XP_013450993.1 | 87.227 | 642 | 39 | 4 | 1 | 600 | 1 | 641 | 0 | 1033 |
| MsG0680030876.01.T02 | XP_013450993.1 | 85.959 | 641 | 39 | 3 | 1 | 590 | 1 | 641 | 0 | 1018 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030876.01.T01 | A0A072U7E1 | 87.227 | 642 | 39 | 4 | 1 | 600 | 1 | 641 | 0.0 | 1033 |
| MsG0680030876.01.T02 | A0A072U7E1 | 85.959 | 641 | 39 | 3 | 1 | 590 | 1 | 641 | 0.0 | 1018 |
| MsG0680030876.01.T03 | A0A072U7E1 | 93.458 | 642 | 40 | 2 | 1 | 641 | 1 | 641 | 0.0 | 1106 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000567.01 | MsG0680030876.01 | 0.843768 | 1.143738e-58 | 1.807995e-55 |
| MsG0180001816.01 | MsG0680030876.01 | 0.806346 | 8.603505e-50 | 4.658637e-47 |
| MsG0180003167.01 | MsG0680030876.01 | 0.812242 | 4.679359e-51 | 2.959626e-48 |
| MsG0180004320.01 | MsG0680030876.01 | 0.819513 | 1.116456e-52 | 8.609619e-50 |
| MsG0180005172.01 | MsG0680030876.01 | 0.810825 | 9.505157e-51 | 5.789311e-48 |
| MsG0180005285.01 | MsG0680030876.01 | 0.832385 | 9.744131e-56 | 1.087373e-52 |
| MsG0280010824.01 | MsG0680030876.01 | 0.806787 | 6.942516e-50 | 3.802020e-47 |
| MsG0680030876.01 | MsG0680034192.01 | 0.804367 | 2.234966e-49 | 1.150262e-46 |
| MsG0680030876.01 | MsG0680035777.01 | 0.809166 | 2.164080e-50 | 1.261432e-47 |
| MsG0680030876.01 | MsG0780037109.01 | 0.834435 | 3.002077e-56 | 3.562460e-53 |
| MsG0680030876.01 | MsG0780039450.01 | 0.825014 | 5.903171e-54 | 5.316577e-51 |
| MsG0680030876.01 | MsG0880042589.01 | 0.805080 | 1.586600e-49 | 8.317092e-47 |
| MsG0680030876.01 | MsG0880043166.01 | 0.801601 | 8.335465e-49 | 3.996938e-46 |
| MsG0680030876.01 | MsG0880043921.01 | 0.818738 | 1.675917e-52 | 1.264908e-49 |
| MsG0680030876.01 | MsG0880046615.01 | 0.813482 | 2.503689e-51 | 1.637012e-48 |
| MsG0480019816.01 | MsG0680030876.01 | 0.805177 | 1.513703e-49 | 7.954880e-47 |
| MsG0480021134.01 | MsG0680030876.01 | 0.808910 | 2.454803e-50 | 1.421048e-47 |
| MsG0480022126.01 | MsG0680030876.01 | 0.811295 | 7.518967e-51 | 4.636520e-48 |
| MsG0480022301.01 | MsG0680030876.01 | 0.828368 | 9.347849e-55 | 9.272200e-52 |
| MsG0480023410.01 | MsG0680030876.01 | 0.807463 | 4.992543e-50 | 2.782682e-47 |
| MsG0580024035.01 | MsG0680030876.01 | 0.811191 | 7.922015e-51 | 4.871830e-48 |
| MsG0580024595.01 | MsG0680030876.01 | 0.815366 | 9.589917e-52 | 6.598814e-49 |
| MsG0380015924.01 | MsG0680030876.01 | 0.800513 | 1.391638e-48 | 6.492078e-46 |
| MsG0380018009.01 | MsG0680030876.01 | 0.808921 | 2.441890e-50 | 1.413980e-47 |
| MsG0580027847.01 | MsG0680030876.01 | 0.847447 | 1.149992e-59 | 2.044633e-56 |
| MsG0580028307.01 | MsG0680030876.01 | 0.804334 | 2.271189e-49 | 1.167886e-46 |
| MsG0580029356.01 | MsG0680030876.01 | 0.815963 | 7.060132e-52 | 4.938178e-49 |
| MsG0280006976.01 | MsG0680030876.01 | 0.852995 | 3.200478e-61 | 6.812384e-58 |
| MsG0280010173.01 | MsG0680030876.01 | 0.812038 | 5.184251e-51 | 3.260528e-48 |
| MsG0280010450.01 | MsG0680030876.01 | 0.806334 | 8.650961e-50 | 4.683057e-47 |
| MsG0280010459.01 | MsG0680030876.01 | 0.809601 | 1.746008e-50 | 1.029638e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030876.01.T03 | MTR_6g013485 | 93.458 | 642 | 40 | 2 | 1 | 641 | 1 | 641 | 0.0 | 1106 |
| MsG0680030876.01.T03 | MTR_7g012290 | 43.662 | 284 | 100 | 11 | 386 | 635 | 288 | 545 | 7.02e-41 | 157 |
| MsG0680030876.01.T03 | MTR_7g012290 | 35.036 | 274 | 131 | 7 | 1 | 245 | 1 | 256 | 1.48e-25 | 111 |
| MsG0680030876.01.T04 | MTR_6g013485 | 93.424 | 517 | 32 | 2 | 2 | 517 | 126 | 641 | 0.0 | 867 |
| MsG0680030876.01.T04 | MTR_7g012290 | 43.662 | 284 | 100 | 11 | 262 | 511 | 288 | 545 | 2.15e-41 | 156 |
| MsG0680030876.01.T04 | MTR_4g109220 | 41.830 | 153 | 48 | 4 | 396 | 507 | 600 | 752 | 6.77e-22 | 100 |
| MsG0680030876.01.T01 | MTR_6g013485 | 87.227 | 642 | 39 | 4 | 1 | 600 | 1 | 641 | 0.0 | 1033 |
| MsG0680030876.01.T01 | MTR_7g012290 | 43.662 | 284 | 100 | 11 | 345 | 594 | 288 | 545 | 8.45e-41 | 156 |
| MsG0680030876.01.T01 | MTR_4g109220 | 41.830 | 153 | 48 | 4 | 479 | 590 | 600 | 752 | 1.65e-21 | 99.8 |
| MsG0680030876.01.T02 | MTR_6g013485 | 85.959 | 641 | 39 | 3 | 1 | 590 | 1 | 641 | 0.0 | 1018 |
| MsG0680030876.01.T02 | MTR_7g012290 | 37.440 | 625 | 270 | 22 | 1 | 584 | 1 | 545 | 1.86e-73 | 245 |
| MsG0680030876.01.T02 | MTR_4g109220 | 41.830 | 153 | 48 | 4 | 469 | 580 | 600 | 752 | 1.73e-21 | 99.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030876.01.T03 | AT5G39380 | 42.574 | 303 | 152 | 9 | 339 | 633 | 218 | 506 | 2.03e-43 | 163 |
| MsG0680030876.01.T03 | AT5G39380 | 42.574 | 303 | 152 | 9 | 339 | 633 | 218 | 506 | 2.03e-43 | 163 |
| MsG0680030876.01.T03 | AT5G39380 | 42.574 | 303 | 152 | 9 | 339 | 633 | 218 | 506 | 2.03e-43 | 163 |
| MsG0680030876.01.T03 | AT5G39380 | 42.574 | 303 | 152 | 9 | 339 | 633 | 218 | 506 | 2.03e-43 | 163 |
| MsG0680030876.01.T03 | AT5G39380 | 42.574 | 303 | 152 | 9 | 339 | 633 | 218 | 506 | 2.03e-43 | 163 |
| MsG0680030876.01.T03 | AT5G15430 | 40.773 | 233 | 119 | 6 | 414 | 640 | 259 | 478 | 9.11e-29 | 120 |
| MsG0680030876.01.T03 | AT5G15430 | 40.773 | 233 | 119 | 6 | 414 | 640 | 259 | 478 | 9.11e-29 | 120 |
| MsG0680030876.01.T03 | AT5G61260 | 45.652 | 138 | 66 | 4 | 500 | 633 | 338 | 470 | 8.91e-22 | 99.8 |
| MsG0680030876.01.T03 | AT5G61260 | 45.652 | 138 | 66 | 4 | 500 | 633 | 338 | 470 | 8.91e-22 | 99.8 |
| MsG0680030876.01.T03 | AT5G61260 | 45.652 | 138 | 66 | 4 | 500 | 633 | 338 | 470 | 8.91e-22 | 99.8 |
| MsG0680030876.01.T03 | AT5G07820 | 42.029 | 138 | 76 | 2 | 500 | 633 | 401 | 538 | 1.51e-17 | 86.7 |
| MsG0680030876.01.T04 | AT5G39380 | 42.574 | 303 | 152 | 9 | 215 | 509 | 218 | 506 | 1.81e-44 | 164 |
| MsG0680030876.01.T04 | AT5G39380 | 42.574 | 303 | 152 | 9 | 215 | 509 | 218 | 506 | 1.81e-44 | 164 |
| MsG0680030876.01.T04 | AT5G39380 | 42.574 | 303 | 152 | 9 | 215 | 509 | 218 | 506 | 1.81e-44 | 164 |
| MsG0680030876.01.T04 | AT5G39380 | 42.574 | 303 | 152 | 9 | 215 | 509 | 218 | 506 | 1.81e-44 | 164 |
| MsG0680030876.01.T04 | AT5G39380 | 42.574 | 303 | 152 | 9 | 215 | 509 | 218 | 506 | 1.81e-44 | 164 |
| MsG0680030876.01.T04 | AT5G15430 | 40.773 | 233 | 119 | 6 | 290 | 516 | 259 | 478 | 4.97e-29 | 120 |
| MsG0680030876.01.T04 | AT5G15430 | 40.773 | 233 | 119 | 6 | 290 | 516 | 259 | 478 | 4.97e-29 | 120 |
| MsG0680030876.01.T04 | AT5G61260 | 45.652 | 138 | 66 | 4 | 376 | 509 | 338 | 470 | 6.38e-22 | 99.4 |
| MsG0680030876.01.T04 | AT5G61260 | 45.652 | 138 | 66 | 4 | 376 | 509 | 338 | 470 | 6.38e-22 | 99.4 |
| MsG0680030876.01.T04 | AT5G61260 | 45.652 | 138 | 66 | 4 | 376 | 509 | 338 | 470 | 6.38e-22 | 99.4 |
| MsG0680030876.01.T04 | AT5G07820 | 42.029 | 138 | 76 | 2 | 376 | 509 | 401 | 538 | 1.02e-17 | 86.7 |
| MsG0680030876.01.T01 | AT5G39380 | 42.574 | 303 | 152 | 9 | 298 | 592 | 218 | 506 | 1.32e-43 | 163 |
| MsG0680030876.01.T01 | AT5G39380 | 47.368 | 76 | 38 | 1 | 26 | 99 | 28 | 103 | 2.40e-11 | 67.0 |
| MsG0680030876.01.T01 | AT5G39380 | 42.574 | 303 | 152 | 9 | 298 | 592 | 218 | 506 | 1.32e-43 | 163 |
| MsG0680030876.01.T01 | AT5G39380 | 47.368 | 76 | 38 | 1 | 26 | 99 | 28 | 103 | 2.40e-11 | 67.0 |
| MsG0680030876.01.T01 | AT5G39380 | 42.574 | 303 | 152 | 9 | 298 | 592 | 218 | 506 | 1.32e-43 | 163 |
| MsG0680030876.01.T01 | AT5G39380 | 47.368 | 76 | 38 | 1 | 26 | 99 | 28 | 103 | 2.40e-11 | 67.0 |
| MsG0680030876.01.T01 | AT5G39380 | 42.574 | 303 | 152 | 9 | 298 | 592 | 218 | 506 | 1.32e-43 | 163 |
| MsG0680030876.01.T01 | AT5G39380 | 47.368 | 76 | 38 | 1 | 26 | 99 | 28 | 103 | 2.40e-11 | 67.0 |
| MsG0680030876.01.T01 | AT5G39380 | 42.574 | 303 | 152 | 9 | 298 | 592 | 218 | 506 | 1.32e-43 | 163 |
| MsG0680030876.01.T01 | AT5G39380 | 47.368 | 76 | 38 | 1 | 26 | 99 | 28 | 103 | 2.40e-11 | 67.0 |
| MsG0680030876.01.T01 | AT5G15430 | 40.773 | 233 | 119 | 6 | 373 | 599 | 259 | 478 | 5.42e-29 | 120 |
| MsG0680030876.01.T01 | AT5G15430 | 40.773 | 233 | 119 | 6 | 373 | 599 | 259 | 478 | 5.42e-29 | 120 |
| MsG0680030876.01.T01 | AT5G61260 | 45.652 | 138 | 66 | 4 | 459 | 592 | 338 | 470 | 8.19e-22 | 99.8 |
| MsG0680030876.01.T01 | AT5G61260 | 45.652 | 138 | 66 | 4 | 459 | 592 | 338 | 470 | 8.19e-22 | 99.8 |
| MsG0680030876.01.T01 | AT5G61260 | 45.652 | 138 | 66 | 4 | 459 | 592 | 338 | 470 | 8.19e-22 | 99.8 |
| MsG0680030876.01.T01 | AT5G07820 | 42.029 | 138 | 76 | 2 | 459 | 592 | 401 | 538 | 1.36e-17 | 86.7 |
| MsG0680030876.01.T02 | AT5G39380 | 42.574 | 303 | 152 | 9 | 288 | 582 | 218 | 506 | 9.45e-44 | 164 |
| MsG0680030876.01.T02 | AT5G39380 | 47.368 | 76 | 38 | 1 | 26 | 99 | 28 | 103 | 2.44e-11 | 66.6 |
| MsG0680030876.01.T02 | AT5G39380 | 42.574 | 303 | 152 | 9 | 288 | 582 | 218 | 506 | 9.45e-44 | 164 |
| MsG0680030876.01.T02 | AT5G39380 | 47.368 | 76 | 38 | 1 | 26 | 99 | 28 | 103 | 2.44e-11 | 66.6 |
| MsG0680030876.01.T02 | AT5G39380 | 42.574 | 303 | 152 | 9 | 288 | 582 | 218 | 506 | 9.45e-44 | 164 |
| MsG0680030876.01.T02 | AT5G39380 | 47.368 | 76 | 38 | 1 | 26 | 99 | 28 | 103 | 2.44e-11 | 66.6 |
| MsG0680030876.01.T02 | AT5G39380 | 42.574 | 303 | 152 | 9 | 288 | 582 | 218 | 506 | 9.45e-44 | 164 |
| MsG0680030876.01.T02 | AT5G39380 | 47.368 | 76 | 38 | 1 | 26 | 99 | 28 | 103 | 2.44e-11 | 66.6 |
| MsG0680030876.01.T02 | AT5G39380 | 42.574 | 303 | 152 | 9 | 288 | 582 | 218 | 506 | 9.45e-44 | 164 |
| MsG0680030876.01.T02 | AT5G39380 | 47.368 | 76 | 38 | 1 | 26 | 99 | 28 | 103 | 2.44e-11 | 66.6 |
| MsG0680030876.01.T02 | AT5G15430 | 40.773 | 233 | 119 | 6 | 363 | 589 | 259 | 478 | 5.08e-29 | 120 |
| MsG0680030876.01.T02 | AT5G15430 | 40.773 | 233 | 119 | 6 | 363 | 589 | 259 | 478 | 5.08e-29 | 120 |
| MsG0680030876.01.T02 | AT5G61260 | 45.652 | 138 | 66 | 4 | 449 | 582 | 338 | 470 | 9.84e-22 | 99.4 |
| MsG0680030876.01.T02 | AT5G61260 | 45.652 | 138 | 66 | 4 | 449 | 582 | 338 | 470 | 9.84e-22 | 99.4 |
| MsG0680030876.01.T02 | AT5G61260 | 45.652 | 138 | 66 | 4 | 449 | 582 | 338 | 470 | 9.84e-22 | 99.4 |
| MsG0680030876.01.T02 | AT5G07820 | 42.029 | 138 | 76 | 2 | 449 | 582 | 401 | 538 | 1.27e-17 | 86.7 |
Find 110 sgRNAs with CRISPR-Local
Find 143 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCAAGCCCTTATGCTTTC+TGG | 0.094132 | 6:-10998771 | None:intergenic |
| TCCTGTCGTCTTGGTAATTT+TGG | 0.135721 | 6:-10998483 | None:intergenic |
| TCAACAACCTTAACCTTTCT+TGG | 0.193411 | 6:-10999136 | None:intergenic |
| TGAAAATTGTGTCTCATCTT+AGG | 0.198519 | 6:+10998789 | MsG0680030876.01.T03:CDS |
| CTTGGAATCGGCCGATATTT+TGG | 0.218154 | 6:-10997907 | None:intergenic |
| TGAATGAAGTTAAGGTTAAC+AGG | 0.306654 | 6:+10998105 | MsG0680030876.01.T03:CDS |
| CATTGGCATCTTTGCTGGCT+TGG | 0.307981 | 6:-10997976 | None:intergenic |
| GACATTGTACGTCGTCAATA+TGG | 0.316886 | 6:+10998874 | MsG0680030876.01.T03:CDS |
| CAGTGAAAGTGTTGAGTTAT+CGG | 0.334028 | 6:+10997629 | MsG0680030876.01.T03:CDS |
| GCAAGGCTAGCTCTGGAAAA+AGG | 0.334491 | 6:+10997706 | MsG0680030876.01.T03:CDS |
| ACGACCATTGGCATCTTTGC+TGG | 0.335566 | 6:-10997981 | None:intergenic |
| GTCAAAACCGACTCTCAAAA+AGG | 0.344434 | 6:+10998430 | MsG0680030876.01.T03:CDS |
| GAAAATTCTTGACTTGTTGA+TGG | 0.365068 | 6:-10998182 | None:intergenic |
| TCTAAATTCCAGAAAGCATA+AGG | 0.366044 | 6:+10998763 | MsG0680030876.01.T03:CDS |
| CTCCTAGGAAGCTTAAATTT+CGG | 0.366942 | 6:+10999233 | MsG0680030876.01.T03:CDS |
| AGATTCCTCTTGGTCTTCTT+CGG | 0.368327 | 6:-10999011 | None:intergenic |
| GTCAAAATCAATTGCTGGTC+AGG | 0.378512 | 6:+10998397 | MsG0680030876.01.T03:CDS |
| ACAGGTGACTTGGTTACATC+TGG | 0.379473 | 6:-10997657 | None:intergenic |
| TCTTCAACGTTTGCTTTCTC+TGG | 0.385250 | 6:-10999271 | None:intergenic |
| GCTGTCGACATCTTACTTGT+TGG | 0.386295 | 6:-10997930 | None:intergenic |
| TGATGGAAGTTTGTGTGTAT+TGG | 0.388134 | 6:-10998054 | None:intergenic |
| ACATATTGTGAATGAAGTTA+AGG | 0.394229 | 6:+10998097 | MsG0680030876.01.T03:CDS |
| ACCGAGGTTGATGAAGAAAT+AGG | 0.398487 | 6:-10998974 | None:intergenic |
| TCTTGTGGCTCTGTTAGGTA+TGG | 0.401105 | 6:-10997832 | None:intergenic |
| CTTCTGCTGCAACTAGTTGA+TGG | 0.403170 | 6:+10999530 | MsG0680030876.01.T03:CDS |
| AAAATCAACTTCTGCTAAGA+TGG | 0.403661 | 6:+10998304 | MsG0680030876.01.T03:CDS |
| TAAGATGTCGACAGCTGTAC+TGG | 0.412734 | 6:+10997938 | MsG0680030876.01.T03:CDS |
| CGACATCTTACTTGTTGGCT+TGG | 0.414022 | 6:-10997925 | None:intergenic |
| CTCTTGGTCTTCTTCGGACA+AGG | 0.417196 | 6:-10999005 | None:intergenic |
| CATGGAAAATGAGGAGACTT+TGG | 0.422673 | 6:+10999093 | MsG0680030876.01.T03:CDS |
| CTTACTTGTTGGCTTGGAAT+CGG | 0.423083 | 6:-10997919 | None:intergenic |
| GGCATCAGAAATTCCAGTCT+TGG | 0.423883 | 6:-10998024 | None:intergenic |
| CTTTCTTGTCCTCAATATCC+TGG | 0.425578 | 6:-10999381 | None:intergenic |
| ACTCCGTCAAAATCAATTGC+TGG | 0.435017 | 6:+10998392 | MsG0680030876.01.T03:CDS |
| TTTGTGTGTATTGGTGTCTA+AGG | 0.437460 | 6:-10998045 | None:intergenic |
| AGGCAAGCCAAGAAAGGTTA+AGG | 0.448399 | 6:+10999129 | MsG0680030876.01.T03:CDS |
| CTCCGAAATTTAAGCTTCCT+AGG | 0.448595 | 6:-10999235 | None:intergenic |
| ATATACAACTAGTGAATTTG+AGG | 0.454905 | 6:+10999036 | MsG0680030876.01.T03:CDS |
| TTGTATATTCAGATTCCTCT+TGG | 0.458877 | 6:-10999021 | None:intergenic |
| TCTGCCGGCAAGGCTAGCTC+TGG | 0.458911 | 6:+10997699 | MsG0680030876.01.T03:CDS |
| ATGAAGTTGAAGTTCAGAAG+AGG | 0.459456 | 6:+10999178 | MsG0680030876.01.T03:CDS |
| GAATCGGTTGATTCCAAGAC+TGG | 0.460800 | 6:+10998011 | MsG0680030876.01.T03:CDS |
| TTCTTTGGAGTTGACTTCGA+TGG | 0.469547 | 6:-10998266 | None:intergenic |
| CAACACTCTCTTGTGAACTT+TGG | 0.470867 | 6:-10997866 | None:intergenic |
| GATCGCCAAGTCCAAAATAT+CGG | 0.473961 | 6:+10997896 | MsG0680030876.01.T03:CDS |
| GGAGCATGCATTTGCTTCAA+AGG | 0.474858 | 6:+10997800 | MsG0680030876.01.T03:CDS |
| TGTTAAAGAAATGAAGTTGT+CGG | 0.488086 | 6:+10998532 | MsG0680030876.01.T03:CDS |
| CGATAACTCAACACTTTCAC+TGG | 0.489360 | 6:-10997628 | None:intergenic |
| TGAAGTTGAAGTTCAGAAGA+GGG | 0.492571 | 6:+10999179 | MsG0680030876.01.T03:CDS |
| ATTTCTTTAACATTTAAAGA+AGG | 0.493773 | 6:-10998521 | None:intergenic |
| TTTGAGACACCAGGATATTG+AGG | 0.500031 | 6:+10999372 | MsG0680030876.01.T03:CDS |
| TGCGACTTCGTTATGAGTGA+TGG | 0.503615 | 6:-10998152 | None:intergenic |
| CAATACTACAAGCCAAGAAA+AGG | 0.507877 | 6:+10999345 | MsG0680030876.01.T03:CDS |
| TTTGTCCTCAAAACCTTCTG+AGG | 0.507912 | 6:-10998621 | None:intergenic |
| ATCGAAGTCAACTCCAAAGA+AGG | 0.513550 | 6:+10998268 | MsG0680030876.01.T03:CDS |
| GAAGAGCAAGGTTAAAGCAT+TGG | 0.524918 | 6:+10999465 | MsG0680030876.01.T03:CDS |
| CAATGAAGTTCCTGTCGTCT+TGG | 0.525699 | 6:-10998492 | None:intergenic |
| ACGTTGAAGATGACGGCGAA+AGG | 0.526867 | 6:+10999284 | MsG0680030876.01.T03:CDS |
| AATGGTCGTACTCAAAGAAT+CGG | 0.529464 | 6:+10997995 | MsG0680030876.01.T03:CDS |
| GTCAAAGTGGATTCCCAAGA+AGG | 0.530990 | 6:+10998334 | MsG0680030876.01.T03:CDS |
| ACCTATTTCTTCATCAACCT+CGG | 0.533692 | 6:+10998973 | MsG0680030876.01.T03:CDS |
| CTAAATTCCAGAAAGCATAA+GGG | 0.537264 | 6:+10998764 | MsG0680030876.01.T03:CDS |
| ACCTTCTGAGGAACTCATAG+AGG | 0.537772 | 6:-10998609 | None:intergenic |
| AAAGAAAGGCAAGCCAAGAA+AGG | 0.539034 | 6:+10999123 | MsG0680030876.01.T03:CDS |
| GCCAAAATTACCAAGACGAC+AGG | 0.542305 | 6:+10998482 | MsG0680030876.01.T03:CDS |
| CATCAACTAGTTGCAGCAGA+AGG | 0.543444 | 6:-10999529 | None:intergenic |
| GTTCACAAGAGAGTGTTGGC+AGG | 0.544323 | 6:+10997871 | MsG0680030876.01.T03:CDS |
| TCCATCAAAATCAGTTGTCA+AGG | 0.544963 | 6:+10998070 | MsG0680030876.01.T03:CDS |
| AAGAAATAGCGAGATCAAGA+TGG | 0.547145 | 6:+10998643 | MsG0680030876.01.T03:CDS |
| AGCAAGGTTAAAGCATTGGT+TGG | 0.549179 | 6:+10999469 | MsG0680030876.01.T03:CDS |
| AATCGAATGCATGGAAAATG+AGG | 0.550501 | 6:+10999084 | MsG0680030876.01.T03:CDS |
| GTATGAATCATCATCATAGC+TGG | 0.550881 | 6:-10998933 | None:intergenic |
| CAGGTGACTTGGTTACATCT+GGG | 0.551958 | 6:-10997656 | None:intergenic |
| ATCAAAATCAACTTCTGCGA+AGG | 0.560457 | 6:+10998235 | MsG0680030876.01.T03:CDS |
| CAAGTAAACTTGTTGAAGCT+CGG | 0.564188 | 6:+10999443 | MsG0680030876.01.T03:CDS |
| GCTTTGGAAGTTGATCTCGA+TGG | 0.566119 | 6:-10998461 | None:intergenic |
| AAGAAGGCACTCTGCCGGCA+AGG | 0.567345 | 6:+10997689 | MsG0680030876.01.T03:CDS |
| ATTGTTGAATAATGTGATTG+AGG | 0.568995 | 6:+10999414 | MsG0680030876.01.T03:CDS |
| CATTATCTCAGAGCTTCCAC+CGG | 0.570323 | 6:+10997747 | MsG0680030876.01.T03:CDS |
| GATTCTTTGAGTACGACCAT+TGG | 0.570728 | 6:-10997993 | None:intergenic |
| ACACAACAACAATGAGGTAG+AGG | 0.572979 | 6:+10998847 | MsG0680030876.01.T03:CDS |
| CAGGAAGAAAACATCGGTAG+AGG | 0.573059 | 6:+10998124 | MsG0680030876.01.T03:CDS |
| AAAATCAATTGCTGGTCAGG+TGG | 0.587796 | 6:+10998400 | MsG0680030876.01.T03:CDS |
| TTCATCATCAACTGATAAGG+AGG | 0.591859 | 6:+10998202 | MsG0680030876.01.T03:CDS |
| TCCTCTATGAGTTCCTCAGA+AGG | 0.592693 | 6:+10998608 | MsG0680030876.01.T03:CDS |
| GGTTAAGGTTGTTGAAGACA+AGG | 0.595367 | 6:+10999144 | MsG0680030876.01.T03:CDS |
| AAATAGGTGTGGACAACTGA+GGG | 0.601697 | 6:-10998958 | None:intergenic |
| TGTTGAAGCTCGGAAGAGCA+AGG | 0.604486 | 6:+10999453 | MsG0680030876.01.T03:CDS |
| AAAGCAAACGTTGAAGATGA+CGG | 0.605478 | 6:+10999277 | MsG0680030876.01.T03:CDS |
| AAGCTGTGAAATCGAATGCA+TGG | 0.606916 | 6:+10999075 | MsG0680030876.01.T03:CDS |
| TTCACAAGAGAGTGTTGGCA+GGG | 0.607114 | 6:+10997872 | MsG0680030876.01.T03:CDS |
| AGATGGAAACTCTGTCAAAG+TGG | 0.612123 | 6:+10998321 | MsG0680030876.01.T03:CDS |
| ACTCTTATAAGAGAAGCTCT+CGG | 0.620143 | 6:-10998734 | None:intergenic |
| TGAATTCGAATCGTGTCGCA+AGG | 0.620776 | 6:+10998573 | MsG0680030876.01.T03:CDS |
| ACTTTGGAAGATGAAAAGAA+AGG | 0.632200 | 6:+10999109 | MsG0680030876.01.T03:CDS |
| AAAGTGGATTCCCAAGAAGG+TGG | 0.632882 | 6:+10998337 | MsG0680030876.01.T03:CDS |
| CAAAGTTCACAAGAGAGTGT+TGG | 0.633891 | 6:+10997867 | MsG0680030876.01.T03:CDS |
| GAAATAGGTGTGGACAACTG+AGG | 0.643340 | 6:-10998959 | None:intergenic |
| GGTTGATGAAGAAATAGGTG+TGG | 0.652125 | 6:-10998969 | None:intergenic |
| CAAGCCAGCAAAGATGCCAA+TGG | 0.654673 | 6:+10997977 | MsG0680030876.01.T03:CDS |
| AGGTGACTTGGTTACATCTG+GGG | 0.663671 | 6:-10997655 | None:intergenic |
| AAAATCATGACAGGAACCGG+TGG | 0.667501 | 6:-10997763 | None:intergenic |
| GTGGAAGCTCTGAGATAATG+CGG | 0.668722 | 6:-10997744 | None:intergenic |
| CTTGTCCGAAGAAGACCAAG+AGG | 0.676569 | 6:+10999006 | MsG0680030876.01.T03:CDS |
| TGAATCATCATCATAGCTGG+CGG | 0.683694 | 6:-10998930 | None:intergenic |
| TAGGTGTGGACAACTGAGGG+AGG | 0.688644 | 6:-10998955 | None:intergenic |
| GGACAAGGATTGAGTAACCG+AGG | 0.690449 | 6:-10998990 | None:intergenic |
| TGATGAACACAACAACAATG+AGG | 0.690822 | 6:+10998841 | MsG0680030876.01.T03:CDS |
| GGTTAACAGGAAGAAAACAT+CGG | 0.695692 | 6:+10998118 | MsG0680030876.01.T03:CDS |
| GAGGACAAGAAAGATGCACA+AGG | 0.728477 | 6:+10999391 | MsG0680030876.01.T03:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTCTTTAACATTTAAAGA+AGG | - | Chr6:10998524-10998543 | None:intergenic | 15.0% |
| ! | AAATTGAGAAAAATACTCCT+AGG | + | Chr6:10999218-10999237 | MsG0680030876.01.T03:CDS | 25.0% |
| ! | ACATATTGTGAATGAAGTTA+AGG | + | Chr6:10998097-10998116 | MsG0680030876.01.T03:CDS | 25.0% |
| ! | ATATACAACTAGTGAATTTG+AGG | + | Chr6:10999036-10999055 | MsG0680030876.01.T03:CDS | 25.0% |
| ! | ATATTTGCAAAAATCATGAC+AGG | - | Chr6:10997775-10997794 | None:intergenic | 25.0% |
| ! | ATTGTTGAATAATGTGATTG+AGG | + | Chr6:10999414-10999433 | MsG0680030876.01.T03:CDS | 25.0% |
| ! | TGTTAAAGAAATGAAGTTGT+CGG | + | Chr6:10998532-10998551 | MsG0680030876.01.T03:CDS | 25.0% |
| !! | ATTTTCATCATCAACTGATA+AGG | + | Chr6:10998199-10998218 | MsG0680030876.01.T03:CDS | 25.0% |
| !! | TGATTTTTGCAAATATGGAA+AGG | + | Chr6:10997779-10997798 | MsG0680030876.01.T03:CDS | 25.0% |
| !! | TGTCATGATTTTTGCAAATA+TGG | + | Chr6:10997774-10997793 | MsG0680030876.01.T03:CDS | 25.0% |
| AAAATCAACTTCTGCTAAGA+TGG | + | Chr6:10998304-10998323 | MsG0680030876.01.T03:CDS | 30.0% | |
| TGAAAATTGTGTCTCATCTT+AGG | + | Chr6:10998789-10998808 | MsG0680030876.01.T03:CDS | 30.0% | |
| TGAATGAAGTTAAGGTTAAC+AGG | + | Chr6:10998105-10998124 | MsG0680030876.01.T03:CDS | 30.0% | |
| TTGTATATTCAGATTCCTCT+TGG | - | Chr6:10999024-10999043 | None:intergenic | 30.0% | |
| ! | ACTTTGGAAGATGAAAAGAA+AGG | + | Chr6:10999109-10999128 | MsG0680030876.01.T03:CDS | 30.0% |
| ! | ATAGGTGATATCAGTTTTCT+TGG | - | Chr6:10998698-10998717 | None:intergenic | 30.0% |
| ! | CTAAATTCCAGAAAGCATAA+GGG | + | Chr6:10998764-10998783 | MsG0680030876.01.T03:CDS | 30.0% |
| ! | GGAGATGATAAAGCTTTTAT+AGG | - | Chr6:10998716-10998735 | None:intergenic | 30.0% |
| ! | TCTAAATTCCAGAAAGCATA+AGG | + | Chr6:10998763-10998782 | MsG0680030876.01.T03:CDS | 30.0% |
| ! | TTTTGACGGAGTTAATACAT+TGG | - | Chr6:10998384-10998403 | None:intergenic | 30.0% |
| !! | GAAAATTCTTGACTTGTTGA+TGG | - | Chr6:10998185-10998204 | None:intergenic | 30.0% |
| !! | TTAGCAGAAGTTGATTTTGA+TGG | - | Chr6:10998302-10998321 | None:intergenic | 30.0% |
| AAAGCAAACGTTGAAGATGA+CGG | + | Chr6:10999277-10999296 | MsG0680030876.01.T03:CDS | 35.0% | |
| AAGAAATAGCGAGATCAAGA+TGG | + | Chr6:10998643-10998662 | MsG0680030876.01.T03:CDS | 35.0% | |
| AATCGAATGCATGGAAAATG+AGG | + | Chr6:10999084-10999103 | MsG0680030876.01.T03:CDS | 35.0% | |
| AATGGTCGTACTCAAAGAAT+CGG | + | Chr6:10997995-10998014 | MsG0680030876.01.T03:CDS | 35.0% | |
| ACTCTTATAAGAGAAGCTCT+CGG | - | Chr6:10998737-10998756 | None:intergenic | 35.0% | |
| ATCAAAATCAACTTCTGCGA+AGG | + | Chr6:10998235-10998254 | MsG0680030876.01.T03:CDS | 35.0% | |
| ATGAAGTTGAAGTTCAGAAG+AGG | + | Chr6:10999178-10999197 | MsG0680030876.01.T03:CDS | 35.0% | |
| CAATACTACAAGCCAAGAAA+AGG | + | Chr6:10999345-10999364 | MsG0680030876.01.T03:CDS | 35.0% | |
| CACCTGTGATTGAAAAAAGA+AGG | + | Chr6:10997673-10997692 | MsG0680030876.01.T03:CDS | 35.0% | |
| CTCCTAGGAAGCTTAAATTT+CGG | + | Chr6:10999233-10999252 | MsG0680030876.01.T03:CDS | 35.0% | |
| GGTTAACAGGAAGAAAACAT+CGG | + | Chr6:10998118-10998137 | MsG0680030876.01.T03:CDS | 35.0% | |
| GTATGAATCATCATCATAGC+TGG | - | Chr6:10998936-10998955 | None:intergenic | 35.0% | |
| TCAACAACCTTAACCTTTCT+TGG | - | Chr6:10999139-10999158 | None:intergenic | 35.0% | |
| TCCATCAAAATCAGTTGTCA+AGG | + | Chr6:10998070-10998089 | MsG0680030876.01.T03:CDS | 35.0% | |
| TGAAGTTGAAGTTCAGAAGA+GGG | + | Chr6:10999179-10999198 | MsG0680030876.01.T03:CDS | 35.0% | |
| TGATGAACACAACAACAATG+AGG | + | Chr6:10998841-10998860 | MsG0680030876.01.T03:CDS | 35.0% | |
| TGATGGAAGTTTGTGTGTAT+TGG | - | Chr6:10998057-10998076 | None:intergenic | 35.0% | |
| TTCATCATCAACTGATAAGG+AGG | + | Chr6:10998202-10998221 | MsG0680030876.01.T03:CDS | 35.0% | |
| ! | ACCTATTTCTTCATCAACCT+CGG | + | Chr6:10998973-10998992 | MsG0680030876.01.T03:CDS | 35.0% |
| ! | GATGTATTTTCCACCTTCTT+GGG | - | Chr6:10998350-10998369 | None:intergenic | 35.0% |
| ! | GTCTCAAAACAACCTTTTCT+TGG | - | Chr6:10999360-10999379 | None:intergenic | 35.0% |
| ! | TGATATCAGTTTTCTTGGAG+CGG | - | Chr6:10998693-10998712 | None:intergenic | 35.0% |
| ! | TGATGTATTTTCCACCTTCT+TGG | - | Chr6:10998351-10998370 | None:intergenic | 35.0% |
| ! | TTTGTGTGTATTGGTGTCTA+AGG | - | Chr6:10998048-10998067 | None:intergenic | 35.0% |
| !! | CAAGTAAACTTGTTGAAGCT+CGG | + | Chr6:10999443-10999462 | MsG0680030876.01.T03:CDS | 35.0% |
| !! | CAGTGAAAGTGTTGAGTTAT+CGG | + | Chr6:10997629-10997648 | MsG0680030876.01.T03:CDS | 35.0% |
| !! | TCCTTGACAACTGATTTTGA+TGG | - | Chr6:10998074-10998093 | None:intergenic | 35.0% |
| !! | TGACCAGCAATTGATTTTGA+CGG | - | Chr6:10998398-10998417 | None:intergenic | 35.0% |
| !! | TTTTCCACCTTTTTGAGAGT+CGG | - | Chr6:10998440-10998459 | None:intergenic | 35.0% |
| !! | TTTTTCAATCACAGGTGACT+TGG | - | Chr6:10997670-10997689 | None:intergenic | 35.0% |
| !!! | TGCCTTCTTTTTTCAATCAC+AGG | - | Chr6:10997678-10997697 | None:intergenic | 35.0% |
| AAAATCAATTGCTGGTCAGG+TGG | + | Chr6:10998400-10998419 | MsG0680030876.01.T03:CDS | 40.0% | |
| AAAGAAAGGCAAGCCAAGAA+AGG | + | Chr6:10999123-10999142 | MsG0680030876.01.T03:CDS | 40.0% | |
| AAATAGGTGTGGACAACTGA+GGG | - | Chr6:10998961-10998980 | None:intergenic | 40.0% | |
| AAGCTGTGAAATCGAATGCA+TGG | + | Chr6:10999075-10999094 | MsG0680030876.01.T03:CDS | 40.0% | |
| ACACAACAACAATGAGGTAG+AGG | + | Chr6:10998847-10998866 | MsG0680030876.01.T03:CDS | 40.0% | |
| ACTCCGTCAAAATCAATTGC+TGG | + | Chr6:10998392-10998411 | MsG0680030876.01.T03:CDS | 40.0% | |
| AGATGGAAACTCTGTCAAAG+TGG | + | Chr6:10998321-10998340 | MsG0680030876.01.T03:CDS | 40.0% | |
| ATCGAAGTCAACTCCAAAGA+AGG | + | Chr6:10998268-10998287 | MsG0680030876.01.T03:CDS | 40.0% | |
| CAACACTCTCTTGTGAACTT+TGG | - | Chr6:10997869-10997888 | None:intergenic | 40.0% | |
| CATGGAAAATGAGGAGACTT+TGG | + | Chr6:10999093-10999112 | MsG0680030876.01.T03:CDS | 40.0% | |
| CGATAACTCAACACTTTCAC+TGG | - | Chr6:10997631-10997650 | None:intergenic | 40.0% | |
| CTCCGAAATTTAAGCTTCCT+AGG | - | Chr6:10999238-10999257 | None:intergenic | 40.0% | |
| CTTTCTTGTCCTCAATATCC+TGG | - | Chr6:10999384-10999403 | None:intergenic | 40.0% | |
| GAAGAGCAAGGTTAAAGCAT+TGG | + | Chr6:10999465-10999484 | MsG0680030876.01.T03:CDS | 40.0% | |
| GACATTGTACGTCGTCAATA+TGG | + | Chr6:10998874-10998893 | MsG0680030876.01.T03:CDS | 40.0% | |
| GATCGCCAAGTCCAAAATAT+CGG | + | Chr6:10997896-10997915 | MsG0680030876.01.T03:CDS | 40.0% | |
| GATTCTTTGAGTACGACCAT+TGG | - | Chr6:10997996-10998015 | None:intergenic | 40.0% | |
| GCAAAAATCATGACAGGAAC+CGG | - | Chr6:10997769-10997788 | None:intergenic | 40.0% | |
| GGTTAAGGTTGTTGAAGACA+AGG | + | Chr6:10999144-10999163 | MsG0680030876.01.T03:CDS | 40.0% | |
| GTCAAAATCAATTGCTGGTC+AGG | + | Chr6:10998397-10998416 | MsG0680030876.01.T03:CDS | 40.0% | |
| TCTTCAACGTTTGCTTTCTC+TGG | - | Chr6:10999274-10999293 | None:intergenic | 40.0% | |
| TGAATCATCATCATAGCTGG+CGG | - | Chr6:10998933-10998952 | None:intergenic | 40.0% | |
| TTTCAAGCCCTTATGCTTTC+TGG | - | Chr6:10998774-10998793 | None:intergenic | 40.0% | |
| TTTGTCCTCAAAACCTTCTG+AGG | - | Chr6:10998624-10998643 | None:intergenic | 40.0% | |
| ! | AAAACCGACTCTCAAAAAGG+TGG | + | Chr6:10998433-10998452 | MsG0680030876.01.T03:CDS | 40.0% |
| ! | AGATTCCTCTTGGTCTTCTT+CGG | - | Chr6:10999014-10999033 | None:intergenic | 40.0% |
| ! | CAAAGTTCACAAGAGAGTGT+TGG | + | Chr6:10997867-10997886 | MsG0680030876.01.T03:CDS | 40.0% |
| ! | GATGGAGTTTTCACCTTCTT+TGG | - | Chr6:10998284-10998303 | None:intergenic | 40.0% |
| ! | GTCAAAACCGACTCTCAAAA+AGG | + | Chr6:10998430-10998449 | MsG0680030876.01.T03:CDS | 40.0% |
| ! | TTTGAGACACCAGGATATTG+AGG | + | Chr6:10999372-10999391 | MsG0680030876.01.T03:CDS | 40.0% |
| !! | ACCGAGGTTGATGAAGAAAT+AGG | - | Chr6:10998977-10998996 | None:intergenic | 40.0% |
| !! | AGCAAGGTTAAAGCATTGGT+TGG | + | Chr6:10999469-10999488 | MsG0680030876.01.T03:CDS | 40.0% |
| !! | CTTACTTGTTGGCTTGGAAT+CGG | - | Chr6:10997922-10997941 | None:intergenic | 40.0% |
| !! | GGTTGATGAAGAAATAGGTG+TGG | - | Chr6:10998972-10998991 | None:intergenic | 40.0% |
| !! | TCCTGTCGTCTTGGTAATTT+TGG | - | Chr6:10998486-10998505 | None:intergenic | 40.0% |
| !! | TGTTTTCTTGTGGCTCTGTT+AGG | - | Chr6:10997840-10997859 | None:intergenic | 40.0% |
| !! | TTCTTTGGAGTTGACTTCGA+TGG | - | Chr6:10998269-10998288 | None:intergenic | 40.0% |
| !! | TTGGTGAAGCTGTTTTCTTG+TGG | - | Chr6:10997850-10997869 | None:intergenic | 40.0% |
| !!! | AAAGGTTGTTTTGAGACACC+AGG | + | Chr6:10999363-10999382 | MsG0680030876.01.T03:CDS | 40.0% |
| !!! | CGTCTTGGTAATTTTGGCTT+TGG | - | Chr6:10998480-10998499 | None:intergenic | 40.0% |
| AAAATCATGACAGGAACCGG+TGG | - | Chr6:10997766-10997785 | None:intergenic | 45.0% | |
| AGGCAAGCCAAGAAAGGTTA+AGG | + | Chr6:10999129-10999148 | MsG0680030876.01.T03:CDS | 45.0% | |
| CAATGAAGTTCCTGTCGTCT+TGG | - | Chr6:10998495-10998514 | None:intergenic | 45.0% | |
| CAGGAAGAAAACATCGGTAG+AGG | + | Chr6:10998124-10998143 | MsG0680030876.01.T03:CDS | 45.0% | |
| CATTATCTCAGAGCTTCCAC+CGG | + | Chr6:10997747-10997766 | MsG0680030876.01.T03:CDS | 45.0% | |
| GAAATAGGTGTGGACAACTG+AGG | - | Chr6:10998962-10998981 | None:intergenic | 45.0% | |
| GAGGACAAGAAAGATGCACA+AGG | + | Chr6:10999391-10999410 | MsG0680030876.01.T03:CDS | 45.0% | |
| GCCAAAATTACCAAGACGAC+AGG | + | Chr6:10998482-10998501 | MsG0680030876.01.T03:CDS | 45.0% | |
| GCTGTCGACATCTTACTTGT+TGG | - | Chr6:10997933-10997952 | None:intergenic | 45.0% | |
| GGAGCATGCATTTGCTTCAA+AGG | + | Chr6:10997800-10997819 | MsG0680030876.01.T03:CDS | 45.0% | |
| GGCATCAGAAATTCCAGTCT+TGG | - | Chr6:10998027-10998046 | None:intergenic | 45.0% | |
| TAAGATGTCGACAGCTGTAC+TGG | + | Chr6:10997938-10997957 | MsG0680030876.01.T03:CDS | 45.0% | |
| TCCTCTATGAGTTCCTCAGA+AGG | + | Chr6:10998608-10998627 | MsG0680030876.01.T03:CDS | 45.0% | |
| TGAATTCGAATCGTGTCGCA+AGG | + | Chr6:10998573-10998592 | MsG0680030876.01.T03:CDS | 45.0% | |
| TGCGACTTCGTTATGAGTGA+TGG | - | Chr6:10998155-10998174 | None:intergenic | 45.0% | |
| ! | AAAGTGGATTCCCAAGAAGG+TGG | + | Chr6:10998337-10998356 | MsG0680030876.01.T03:CDS | 45.0% |
| ! | ACCTTCTGAGGAACTCATAG+AGG | - | Chr6:10998612-10998631 | None:intergenic | 45.0% |
| ! | CAGTTTTCTTGGAGCGGTTT+TGG | - | Chr6:10998687-10998706 | None:intergenic | 45.0% |
| ! | CGACATCTTACTTGTTGGCT+TGG | - | Chr6:10997928-10997947 | None:intergenic | 45.0% |
| ! | CTTGGAATCGGCCGATATTT+TGG | - | Chr6:10997910-10997929 | None:intergenic | 45.0% |
| ! | GAATCGGTTGATTCCAAGAC+TGG | + | Chr6:10998011-10998030 | MsG0680030876.01.T03:CDS | 45.0% |
| ! | GAGTTCCTCAGAAGGTTTTG+AGG | + | Chr6:10998616-10998635 | MsG0680030876.01.T03:CDS | 45.0% |
| ! | GTCAAAGTGGATTCCCAAGA+AGG | + | Chr6:10998334-10998353 | MsG0680030876.01.T03:CDS | 45.0% |
| ! | TCTTGTGGCTCTGTTAGGTA+TGG | - | Chr6:10997835-10997854 | None:intergenic | 45.0% |
| !! | ACAGGTGACTTGGTTACATC+TGG | - | Chr6:10997660-10997679 | None:intergenic | 45.0% |
| !! | AGGTGACTTGGTTACATCTG+GGG | - | Chr6:10997658-10997677 | None:intergenic | 45.0% |
| !! | ATCGGCCGATATTTTGGACT+TGG | - | Chr6:10997904-10997923 | None:intergenic | 45.0% |
| !! | CAGGTGACTTGGTTACATCT+GGG | - | Chr6:10997659-10997678 | None:intergenic | 45.0% |
| !! | GAAAAAAGAAGGCACTCTGC+CGG | + | Chr6:10997684-10997703 | MsG0680030876.01.T03:CDS | 45.0% |
| !! | GCTTTGGAAGTTGATCTCGA+TGG | - | Chr6:10998464-10998483 | None:intergenic | 45.0% |
| !! | GTGGAAGCTCTGAGATAATG+CGG | - | Chr6:10997747-10997766 | None:intergenic | 45.0% |
| !! | TTCACAAGAGAGTGTTGGCA+GGG | + | Chr6:10997872-10997891 | MsG0680030876.01.T03:CDS | 45.0% |
| !! | TTTTCTTGGAGCGGTTTTGG+AGG | - | Chr6:10998684-10998703 | None:intergenic | 45.0% |
| !!! | TTTCTTGGAGCGGTTTTGGA+GGG | - | Chr6:10998683-10998702 | None:intergenic | 45.0% |
| ACGACCATTGGCATCTTTGC+TGG | - | Chr6:10997984-10998003 | None:intergenic | 50.0% | |
| CAAGCCAGCAAAGATGCCAA+TGG | + | Chr6:10997977-10997996 | MsG0680030876.01.T03:CDS | 50.0% | |
| CTTGTCCGAAGAAGACCAAG+AGG | + | Chr6:10999006-10999025 | MsG0680030876.01.T03:CDS | 50.0% | |
| GGACAAGGATTGAGTAACCG+AGG | - | Chr6:10998993-10999012 | None:intergenic | 50.0% | |
| TGTTGAAGCTCGGAAGAGCA+AGG | + | Chr6:10999453-10999472 | MsG0680030876.01.T03:CDS | 50.0% | |
| ! | ACGTTGAAGATGACGGCGAA+AGG | + | Chr6:10999284-10999303 | MsG0680030876.01.T03:CDS | 50.0% |
| ! | CATTGGCATCTTTGCTGGCT+TGG | - | Chr6:10997979-10997998 | None:intergenic | 50.0% |
| ! | CTCTTGGTCTTCTTCGGACA+AGG | - | Chr6:10999008-10999027 | None:intergenic | 50.0% |
| !! | GCAAGGCTAGCTCTGGAAAA+AGG | + | Chr6:10997706-10997725 | MsG0680030876.01.T03:CDS | 50.0% |
| !! | GTTCACAAGAGAGTGTTGGC+AGG | + | Chr6:10997871-10997890 | MsG0680030876.01.T03:CDS | 50.0% |
| !!! | TTCTTGGAGCGGTTTTGGAG+GGG | - | Chr6:10998682-10998701 | None:intergenic | 50.0% |
| !!! | TTTTCCAGAGCTAGCCTTGC+CGG | - | Chr6:10997706-10997725 | None:intergenic | 50.0% |
| TAGGTGTGGACAACTGAGGG+AGG | - | Chr6:10998958-10998977 | None:intergenic | 55.0% | |
| !!! | TCTTGGAGCGGTTTTGGAGG+GGG | - | Chr6:10998681-10998700 | None:intergenic | 55.0% |
| !! | AAGAAGGCACTCTGCCGGCA+AGG | + | Chr6:10997689-10997708 | MsG0680030876.01.T03:CDS | 60.0% |
| ! | TCTGCCGGCAAGGCTAGCTC+TGG | + | Chr6:10997699-10997718 | MsG0680030876.01.T03:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 10997624 | 10999549 | 10997624 | ID=MsG0680030876.01;Name=MsG0680030876.01 |
| Chr6 | mRNA | 10997624 | 10999549 | 10997624 | ID=MsG0680030876.01.T01;Parent=MsG0680030876.01;Name=MsG0680030876.01.T01;_AED=0.28;_eAED=0.28;_QI=0|0|0|1|0|0|3|0|600 |
| Chr6 | exon | 10997934 | 10998436 | 10997934 | ID=MsG0680030876.01.T01:exon:5412;Parent=MsG0680030876.01.T01 |
| Chr6 | exon | 10998518 | 10999549 | 10998518 | ID=MsG0680030876.01.T01:exon:5413;Parent=MsG0680030876.01.T01 |
| Chr6 | CDS | 10997624 | 10997891 | 10997624 | ID=MsG0680030876.01.T01:cds;Parent=MsG0680030876.01.T01 |
| Chr6 | CDS | 10997934 | 10998436 | 10997934 | ID=MsG0680030876.01.T01:cds;Parent=MsG0680030876.01.T01 |
| Chr6 | CDS | 10998518 | 10999549 | 10998518 | ID=MsG0680030876.01.T01:cds;Parent=MsG0680030876.01.T01 |
| Chr6 | mRNA | 10997624 | 10999549 | 10997624 | ID=MsG0680030876.01.T02;Parent=MsG0680030876.01;Name=MsG0680030876.01.T02;_AED=0.29;_eAED=0.29;_QI=0|0|0|1|0|0|3|0|590 |
| Chr6 | exon | 10997934 | 10998392 | 10997934 | ID=MsG0680030876.01.T02:exon:5414;Parent=MsG0680030876.01.T02 |
| Chr6 | exon | 10998504 | 10999549 | 10998504 | ID=MsG0680030876.01.T02:exon:5415;Parent=MsG0680030876.01.T02 |
| Chr6 | CDS | 10997624 | 10997891 | 10997624 | ID=MsG0680030876.01.T02:cds;Parent=MsG0680030876.01.T02 |
| Chr6 | CDS | 10997934 | 10998392 | 10997934 | ID=MsG0680030876.01.T02:cds;Parent=MsG0680030876.01.T02 |
| Chr6 | CDS | 10998504 | 10999549 | 10998504 | ID=MsG0680030876.01.T02:cds;Parent=MsG0680030876.01.T02 |
| Chr6 | mRNA | 10997624 | 10999549 | 10997624 | ID=MsG0680030876.01.T03;Parent=MsG0680030876.01;Name=MsG0680030876.01.T03;_AED=0.27;_eAED=0.27;_QI=0|-1|0|1|-1|1|1|0|641 |
| Chr6 | exon | 10997624 | 10999549 | 10997624 | ID=MsG0680030876.01.T03:exon:5416;Parent=MsG0680030876.01.T03 |
| Chr6 | CDS | 10997624 | 10999549 | 10997624 | ID=MsG0680030876.01.T03:cds;Parent=MsG0680030876.01.T03 |
| Chr6 | mRNA | 10997996 | 10999549 | 10997996 | ID=MsG0680030876.01.T04;Parent=MsG0680030876.01;Name=MsG0680030876.01.T04;_AED=0.31;_eAED=0.31;_QI=0|-1|0|1|-1|0|1|0|517 |
| Chr6 | exon | 10997996 | 10999549 | 10997996 | ID=MsG0680030876.01.T04:exon:5417;Parent=MsG0680030876.01.T04 |
| Chr6 | CDS | 10997996 | 10999549 | 10997996 | ID=MsG0680030876.01.T04:cds;Parent=MsG0680030876.01.T04 |
| Gene Sequence |
| Protein sequence |
