AlfalfaGEDB | MsG0180000567.01

M. sativa cultivar ZhongmuNo.1 / MsG0180000567.01

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180000567.01.T01	XP_013465831.1	85.171	263	5	2	1	230	1	262	3.70E-158	448

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180000567.01.T01	Q39262	40.351	171	65	8	34	189	20	168	3.16E-22	94

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180000567.01.T01	A0A072VDM2	85.171	263	5	2	1	230	1	262	1.77e-158	448

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048035.01	MsG0180000567.01	0.805707	1.172181e-49	6.244946e-47
MsG0080048557.01	MsG0180000567.01	-0.805074	1.590662e-49	8.337244e-47
MsG0080048754.01	MsG0180000567.01	-0.830809	2.381981e-55	2.537246e-52
MsG0180000222.01	MsG0180000567.01	0.805792	1.125188e-49	6.007375e-47
MsG0180000567.01	MsG0180000585.01	0.814142	1.790966e-51	1.192126e-48
MsG0180000567.01	MsG0180000729.01	0.801127	1.042391e-48	4.939424e-46
MsG0180000567.01	MsG0180001006.01	0.831049	2.080594e-55	2.231863e-52
MsG0180000567.01	MsG0180002912.01	0.850785	1.356400e-60	2.687317e-57
MsG0180000567.01	MsG0180003167.01	0.803510	3.368776e-49	1.696085e-46
MsG0180000567.01	MsG0180003190.01	0.804268	2.343546e-49	1.203043e-46
MsG0180000567.01	MsG0180003948.01	0.803786	2.952714e-49	1.497152e-46
MsG0180000567.01	MsG0180004060.01	0.821664	3.580869e-53	2.931776e-50
MsG0180000567.01	MsG0180004079.01	0.808675	2.756971e-50	1.586082e-47
MsG0180000567.01	MsG0180004147.01	0.801208	1.003288e-48	4.763666e-46
MsG0180000567.01	MsG0180004258.01	0.806488	8.026778e-50	4.362340e-47
MsG0180000567.01	MsG0180004320.01	0.828952	6.751885e-55	6.811991e-52
MsG0180000567.01	MsG0180004388.01	0.824838	6.495707e-54	5.820614e-51
MsG0180000567.01	MsG0180004752.01	0.802537	5.352589e-49	2.628562e-46
MsG0180000567.01	MsG0180004867.01	0.801641	8.180430e-49	3.926671e-46
MsG0180000567.01	MsG0180005125.01	0.813680	2.264716e-51	1.488684e-48
MsG0180000567.01	MsG0180005172.01	0.824540	7.637251e-54	6.784888e-51
MsG0180000567.01	MsG0180005285.01	0.816391	5.665661e-52	4.009414e-49
MsG0180000567.01	MsG0180005350.01	0.803099	4.097076e-49	2.040937e-46
MsG0180000567.01	MsG0180005419.01	0.801654	8.131895e-49	3.904601e-46
MsG0180000567.01	MsG0180006012.01	0.815633	8.367327e-52	5.800124e-49
MsG0180000567.01	MsG0180006016.01	0.816105	6.564402e-52	4.609335e-49
MsG0180000567.01	MsG0180006069.01	0.810011	1.425006e-50	8.494631e-48
MsG0180000567.01	MsG0180006108.01	0.811211	7.843603e-51	4.826264e-48
MsG0180000567.01	MsG0180006111.01	0.807314	5.369334e-50	2.981113e-47
MsG0180000567.01	MsG0180006143.01	0.817787	2.751208e-52	2.022889e-49
MsG0180000567.01	MsG0180006226.01	-0.830105	3.541482e-55	3.695376e-52
MsG0180000567.01	MsG0280006356.01	0.803444	3.475782e-49	1.746938e-46
MsG0180000567.01	MsG0280006421.01	0.802562	5.288537e-49	2.598715e-46
MsG0180000567.01	MsG0280006976.01	0.820754	5.803422e-53	4.632366e-50
MsG0180000567.01	MsG0280007089.01	0.803856	2.854745e-49	1.450124e-46
MsG0180000567.01	MsG0280007133.01	-0.802259	6.108349e-49	2.978535e-46
MsG0180000567.01	MsG0280007609.01	0.810115	1.352975e-50	8.087014e-48
MsG0180000567.01	MsG0280007610.01	0.824143	9.469126e-54	8.317172e-51
MsG0180000567.01	MsG0280008907.01	0.829183	5.936699e-55	6.031178e-52
MsG0180000567.01	MsG0280010173.01	0.811335	7.371046e-51	4.550097e-48
MsG0180000567.01	MsG0280010275.01	-0.817127	3.874600e-52	2.797661e-49
MsG0180000567.01	MsG0280010276.01	-0.816562	5.186647e-52	3.687666e-49
MsG0180000567.01	MsG0280010459.01	0.802008	6.878527e-49	3.332653e-46
MsG0180000567.01	MsG0280010614.01	0.834894	2.301709e-56	2.768902e-53
MsG0180000567.01	MsG0280010739.01	0.807351	5.273957e-50	2.930926e-47
MsG0180000567.01	MsG0280011152.01	0.807286	5.444999e-50	3.020896e-47
MsG0180000567.01	MsG0280011285.01	0.816711	4.803610e-52	3.429206e-49
MsG0180000567.01	MsG0280011286.01	0.804017	2.642712e-49	1.347981e-46
MsG0180000567.01	MsG0280011446.01	0.813753	2.182350e-51	1.437339e-48
MsG0180000567.01	MsG0380013184.01	0.804747	1.862279e-49	9.679548e-47
MsG0180000567.01	MsG0380014006.01	-0.802174	6.357632e-49	3.093387e-46
MsG0180000567.01	MsG0380014161.01	0.806639	7.459395e-50	4.069356e-47
MsG0180000567.01	MsG0380014573.01	0.822678	2.083295e-53	1.755722e-50
MsG0180000567.01	MsG0380014680.01	0.817086	3.956293e-52	2.853514e-49
MsG0180000567.01	MsG0380015779.01	0.818586	1.814659e-52	1.363854e-49
MsG0180000567.01	MsG0380015931.01	0.815976	7.012804e-52	4.906781e-49
MsG0180000567.01	MsG0380016273.01	0.807487	4.934601e-50	2.752050e-47
MsG0180000567.01	MsG0380016367.01	-0.839309	1.711851e-57	2.354642e-54
MsG0180000567.01	MsG0380017135.01	-0.814966	1.176915e-51	8.010190e-49
MsG0180000567.01	MsG0380017146.01	0.808601	2.858693e-50	1.641459e-47
MsG0180000567.01	MsG0380017286.01	0.806487	8.034054e-50	4.366050e-47
MsG0180000567.01	MsG0380017403.01	0.810831	9.478794e-51	5.774118e-48
MsG0180000567.01	MsG0380018009.01	0.876263	1.604420e-68	7.727609e-65
MsG0180000567.01	MsG0480018160.01	0.803440	3.482057e-49	1.749910e-46
MsG0180000567.01	MsG0480018970.01	0.808285	3.338782e-50	1.901430e-47
MsG0180000567.01	MsG0480018998.01	0.802686	4.987694e-49	2.458661e-46
MsG0180000567.01	MsG0480019038.01	0.808146	3.574705e-50	2.028338e-47
MsG0180000567.01	MsG0480019277.01	0.807143	5.836556e-50	3.226011e-47
MsG0180000567.01	MsG0480019816.01	0.804097	2.544143e-49	1.300350e-46
MsG0180000567.01	MsG0480020444.01	0.818877	1.558728e-52	1.181019e-49
MsG0180000567.01	MsG0480020445.01	0.855643	5.496713e-62	1.277741e-58
MsG0180000567.01	MsG0480022274.01	0.801895	7.254604e-49	3.505048e-46
MsG0180000567.01	MsG0480022301.01	0.841636	4.214419e-58	6.230827e-55
MsG0180000567.01	MsG0480022479.01	0.802347	5.858217e-49	2.863073e-46
MsG0180000567.01	MsG0480022480.01	0.840053	1.095841e-57	1.542660e-54
MsG0180000567.01	MsG0480022530.01	0.800563	1.359004e-48	6.347974e-46
MsG0180000567.01	MsG0480022974.01	0.834852	2.357872e-56	2.832946e-53
MsG0180000567.01	MsG0480023088.01	0.805583	1.244320e-49	6.607809e-47
MsG0180000567.01	MsG0480023245.01	0.824287	8.760066e-54	7.725190e-51
MsG0180000567.01	MsG0480023410.01	0.803862	2.846156e-49	1.445998e-46
MsG0180000567.01	MsG0480023674.01	-0.845691	3.466992e-59	5.825717e-56
MsG0180000567.01	MsG0480023707.01	0.810837	9.449086e-51	5.757079e-48
MsG0180000567.01	MsG0580024204.01	0.812938	3.296123e-51	2.123417e-48
MsG0180000567.01	MsG0580024407.01	0.831781	1.374228e-55	1.506773e-52
MsG0180000567.01	MsG0580024682.01	0.807491	4.925497e-50	2.747270e-47
MsG0180000567.01	MsG0580024999.01	0.840848	6.790891e-58	9.797112e-55
MsG0180000567.01	MsG0580025321.01	0.804098	2.542219e-49	1.299400e-46
MsG0180000567.01	MsG0580027129.01	0.842365	2.703451e-58	4.090059e-55
MsG0180000567.01	MsG0580027345.01	0.824065	9.876202e-54	8.655443e-51
MsG0180000567.01	MsG0580027847.01	0.851726	7.354877e-61	1.502531e-57
MsG0180000567.01	MsG0580028307.01	0.821543	3.818823e-53	3.115984e-50
MsG0180000567.01	MsG0580028355.01	0.829983	3.792336e-55	3.943488e-52
MsG0180000567.01	MsG0580029798.01	0.841182	5.549912e-58	8.089499e-55
MsG0180000567.01	MsG0580029901.01	0.807404	5.138214e-50	2.859474e-47
MsG0180000567.01	MsG0580029906.01	0.809897	1.507398e-50	8.958440e-48
MsG0180000567.01	MsG0580029960.01	0.829953	3.857458e-55	4.007546e-52
MsG0180000567.01	MsG0580030235.01	0.807206	5.659983e-50	3.133615e-47
MsG0180000567.01	MsG0680030436.01	0.808808	2.582334e-50	1.490797e-47
MsG0180000567.01	MsG0680030876.01	0.843768	1.143738e-58	1.807995e-55
MsG0180000567.01	MsG0680031243.01	0.802310	5.961296e-49	2.910803e-46
MsG0180000567.01	MsG0680031651.01	0.822141	2.775986e-53	2.303884e-50
MsG0180000567.01	MsG0680032017.01	0.811301	7.497424e-51	4.623998e-48
MsG0180000567.01	MsG0680033339.01	0.823034	1.720677e-53	1.464876e-50
MsG0180000567.01	MsG0680034395.01	0.822771	1.981765e-53	1.674605e-50
MsG0180000567.01	MsG0680034450.01	0.827674	1.372796e-54	1.334372e-51
MsG0180000567.01	MsG0680035777.01	0.844495	7.300003e-59	1.180661e-55
MsG0180000567.01	MsG0780037109.01	0.879087	1.659283e-69	8.877970e-66
MsG0180000567.01	MsG0780038135.01	0.800984	1.114941e-48	5.264287e-46
MsG0180000567.01	MsG0780038495.01	0.811282	7.568556e-51	4.665533e-48
MsG0180000567.01	MsG0780039249.01	0.804625	1.974945e-49	1.023168e-46
MsG0180000567.01	MsG0780039450.01	0.832263	1.044299e-55	1.161046e-52
MsG0180000567.01	MsG0780039462.01	-0.801048	1.082152e-48	5.117717e-46
MsG0180000567.01	MsG0780040144.01	0.829802	4.198442e-55	4.343597e-52
MsG0180000567.01	MsG0780040442.01	0.837720	4.400595e-57	5.766694e-54
MsG0180000567.01	MsG0780040488.01	0.806788	6.939223e-50	3.800296e-47
MsG0180000567.01	MsG0780040505.01	0.823125	1.638853e-53	1.398786e-50
MsG0180000567.01	MsG0780040723.01	0.823328	1.469334e-53	1.261163e-50
MsG0180000567.01	MsG0780040861.01	0.832296	1.024984e-55	1.140688e-52
MsG0180000567.01	MsG0880041985.01	0.880418	5.579629e-70	3.141380e-66
MsG0180000567.01	MsG0880042404.01	0.800757	1.240717e-48	5.823915e-46
MsG0180000567.01	MsG0880042589.01	0.823217	1.559819e-53	1.334667e-50
MsG0180000567.01	MsG0880042663.01	0.827415	1.584060e-54	1.528372e-51
MsG0180000567.01	MsG0880042843.01	0.826442	2.707436e-54	2.539420e-51
MsG0180000567.01	MsG0880042957.01	0.810596	1.065398e-50	6.449259e-48
MsG0180000567.01	MsG0880042967.01	0.842099	3.178908e-58	4.769028e-55
MsG0180000567.01	MsG0880043262.01	0.801267	9.759924e-49	4.640964e-46
MsG0180000567.01	MsG0880043291.01	0.802092	6.609071e-49	3.209051e-46
MsG0180000567.01	MsG0880043921.01	0.826086	3.290055e-54	3.054592e-51
MsG0180000567.01	MsG0880045133.01	0.803798	2.935078e-49	1.488669e-46
MsG0180000567.01	MsG0880045290.01	0.801752	7.762962e-49	3.736715e-46
MsG0180000567.01	MsG0880046099.01	-0.804181	2.443299e-49	1.251467e-46
MsG0180000567.01	MsG0880046251.01	-0.855095	7.936682e-62	1.811464e-58
MsG0180000567.01	MsG0880046285.01	0.811983	5.329039e-51	3.346741e-48
MsG0180000567.01	MsG0880046328.01	0.813267	2.791020e-51	1.814119e-48
MsG0180000567.01	MsG0880046467.01	0.810457	1.141878e-50	6.886304e-48
MsG0180000567.01	MsG0880046642.01	0.800065	1.716396e-48	7.916769e-46
MsG0180000567.01	MsG0880046817.01	0.817587	3.052874e-52	2.232298e-49
MsG0180000567.01	MsG0880047497.01	0.822756	1.997613e-53	1.687336e-50

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180000567.01.T01	MTR_1g013130	85.171	263	5	2	1	230	1	262	4.48e-162	448
MsG0180000567.01.T01	MTR_3g106230	41.102	236	82	9	23	215	4	225	2.11e-38	133
MsG0180000567.01.T01	MTR_2g104900	28.521	284	112	13	1	230	1	247	1.11e-13	68.6
MsG0180000567.01.T01	MTR_5g077370	36.975	119	48	4	60	178	89	180	2.47e-12	64.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180000567.01.T01	AT5G10970	39.216	204	78	9	49	230	93	272	3.97e-27	105
MsG0180000567.01.T01	AT5G25160	40.351	171	65	8	34	189	20	168	3.23e-23	94.0
MsG0180000567.01.T01	AT1G80730	36.723	177	90	7	60	230	68	228	3.38e-18	80.5

Find 30 sgRNAs with CRISPR-Local

Find 38 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTCAAACTCAAGAATCTTTA+TGG	0.122503	1:+7961303	MsG0180000567.01.T01:CDS
ATGGCTTCTTTGCCTCTTTA+TGG	0.168485	1:+7961163	MsG0180000567.01.T01:CDS
CTTTGTTTATTATGCATAAT+AGG	0.201649	1:-7961130	None:intergenic
CCTTCTCATGTTTCATCTAA+TGG	0.202335	1:+7961241	MsG0180000567.01.T01:CDS
CATGTTTCATCTAATGGATT+TGG	0.228057	1:+7961247	MsG0180000567.01.T01:CDS
AATGGATTTGGAAACTCTTA+TGG	0.229174	1:+7961259	MsG0180000567.01.T01:CDS
ATAGCTTCAGCTTCTGCTTT+TGG	0.233602	1:+7961103	MsG0180000567.01.T01:CDS
TTGCCTCTTTATGGTGCTTT+TGG	0.261823	1:+7961172	MsG0180000567.01.T01:CDS
ATGAAACATGAGAAGGCTTA+TGG	0.351379	1:-7961234	None:intergenic
CTCATAACTTCTTTAGATGT+TGG	0.385754	1:+7960912	MsG0180000567.01.T01:CDS
TGCAAAGGTGTGCTTGGACT+TGG	0.428789	1:-7960750	None:intergenic
TTTGGTGGTAATAAACCTCT+TGG	0.453972	1:+7961190	MsG0180000567.01.T01:CDS
AAAGGTGTGCTTGGACTTGG+AGG	0.516654	1:-7960747	None:intergenic
TGGAATAGCAAAACTAGGTA+TGG	0.517898	1:+7961336	MsG0180000567.01.T01:CDS
ATCTTTATGGATCAACAACC+TGG	0.518646	1:+7961316	MsG0180000567.01.T01:CDS
CAACCTGGAATAGCAAAACT+AGG	0.529841	1:+7961331	MsG0180000567.01.T01:CDS
CCACCAAAAGCACCATAAAG+AGG	0.536698	1:-7961175	None:intergenic
CATCAAGAGGAAGTGTTGGT+AGG	0.548091	1:+7961383	MsG0180000567.01.T01:CDS
AAGTGTTGGTAGGTTTGAAG+TGG	0.552808	1:+7961393	MsG0180000567.01.T01:CDS
GAAGAAACAACAATCTATTG+AGG	0.558110	1:+7960788	MsG0180000567.01.T01:CDS
ATTAATGGAAAGACTAAGCA+AGG	0.563627	1:+7960695	None:intergenic
TATGGACATCATCATCATCA+TGG	0.564611	1:+7961277	MsG0180000567.01.T01:CDS
TCTTGAGAAGAGAAGATGCA+TGG	0.579539	1:-7960720	None:intergenic
GGTAGAAGAAGATATCACTA+AGG	0.583712	1:+7960809	MsG0180000567.01.T01:CDS
ACATCATCAAGAGGAAGTGT+TGG	0.585725	1:+7961379	MsG0180000567.01.T01:CDS
AGAACAACAACATCATCAAG+AGG	0.611847	1:+7961370	MsG0180000567.01.T01:CDS
ATATTCATAATCATAGCTTG+AGG	0.612882	1:-7961477	None:intergenic
TAAACAAAGTTATGCAAACA+TGG	0.616969	1:+7961144	MsG0180000567.01.T01:CDS
CCATTAGATGAAACATGAGA+AGG	0.626125	1:-7961241	None:intergenic
GAGTGTGCTTGAATTCCAAG+AGG	0.647089	1:-7961205	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	CTTTGTTTATTATGCATAAT+AGG	-	Chr1:7961133-7961152	None:intergenic	20.0%
!	TAAACAAAGTTATGCAAACA+TGG	+	Chr1:7961144-7961163	MsG0180000567.01.T01:CDS	25.0%
!!!	TTTTCATGTTGATTTTGCAA+AGG	-	Chr1:7960768-7960787	None:intergenic	25.0%
	CTCATAACTTCTTTAGATGT+TGG	+	Chr1:7960912-7960931	MsG0180000567.01.T01:CDS	30.0%
	GAAGAAACAACAATCTATTG+AGG	+	Chr1:7960788-7960807	MsG0180000567.01.T01:CDS	30.0%
	GTCAAACTCAAGAATCTTTA+TGG	+	Chr1:7961303-7961322	MsG0180000567.01.T01:CDS	30.0%
!	AATGGATTTGGAAACTCTTA+TGG	+	Chr1:7961259-7961278	MsG0180000567.01.T01:CDS	30.0%
!!	CATGTTTCATCTAATGGATT+TGG	+	Chr1:7961247-7961266	MsG0180000567.01.T01:CDS	30.0%
	AGAACAACAACATCATCAAG+AGG	+	Chr1:7961370-7961389	MsG0180000567.01.T01:CDS	35.0%
	ATCTTTATGGATCAACAACC+TGG	+	Chr1:7961316-7961335	MsG0180000567.01.T01:CDS	35.0%
	ATGAAACATGAGAAGGCTTA+TGG	-	Chr1:7961237-7961256	None:intergenic	35.0%
	CCATTAGATGAAACATGAGA+AGG	-	Chr1:7961244-7961263	None:intergenic	35.0%
	CCTTCTCATGTTTCATCTAA+TGG	+	Chr1:7961241-7961260	MsG0180000567.01.T01:CDS	35.0%
	GAGAGATCAATAGCAAAAAG+AGG	+	Chr1:7961058-7961077	MsG0180000567.01.T01:CDS	35.0%
	GCAAAAAGAGGACAAAGATT+TGG	+	Chr1:7961070-7961089	MsG0180000567.01.T01:CDS	35.0%
	GGTAGAAGAAGATATCACTA+AGG	+	Chr1:7960809-7960828	MsG0180000567.01.T01:CDS	35.0%
	TATGGACATCATCATCATCA+TGG	+	Chr1:7961277-7961296	MsG0180000567.01.T01:CDS	35.0%
	TGGAATAGCAAAACTAGGTA+TGG	+	Chr1:7961336-7961355	MsG0180000567.01.T01:CDS	35.0%
	TTCTATAGCTCACAAGCATT+AGG	+	Chr1:7961010-7961029	MsG0180000567.01.T01:intron	35.0%
!	TCTCTCTTTTGTGAGCATTT+TGG	-	Chr1:7961042-7961061	None:intergenic	35.0%
!	TTTGGTGGTAATAAACCTCT+TGG	+	Chr1:7961190-7961209	MsG0180000567.01.T01:CDS	35.0%
!!!	ATACCTAGTTTTGCTATTCC+AGG	-	Chr1:7961337-7961356	None:intergenic	35.0%
	ATGGCTTCTTTGCCTCTTTA+TGG	+	Chr1:7961163-7961182	MsG0180000567.01.T01:CDS	40.0%
	CAACCTGGAATAGCAAAACT+AGG	+	Chr1:7961331-7961350	MsG0180000567.01.T01:CDS	40.0%
	GACATCATCATCATCATGGT+TGG	+	Chr1:7961281-7961300	MsG0180000567.01.T01:CDS	40.0%
	TATAGCTCACAAGCATTAGG+TGG	+	Chr1:7961013-7961032	MsG0180000567.01.T01:intron	40.0%
	TCTTGAGAAGAGAAGATGCA+TGG	-	Chr1:7960723-7960742	None:intergenic	40.0%
!	ACATCATCAAGAGGAAGTGT+TGG	+	Chr1:7961379-7961398	MsG0180000567.01.T01:CDS	40.0%
!	ATAGCTTCAGCTTCTGCTTT+TGG	+	Chr1:7961103-7961122	MsG0180000567.01.T01:CDS	40.0%
!	TTGCCTCTTTATGGTGCTTT+TGG	+	Chr1:7961172-7961191	MsG0180000567.01.T01:CDS	40.0%
!!	AAGTGTTGGTAGGTTTGAAG+TGG	+	Chr1:7961393-7961412	MsG0180000567.01.T01:CDS	40.0%
!!	TGATTTTGCAAAGGTGTGCT+TGG	-	Chr1:7960759-7960778	None:intergenic	40.0%
	GAGTGTGCTTGAATTCCAAG+AGG	-	Chr1:7961208-7961227	None:intergenic	45.0%
!	CCTCTTTATGGTGCTTTTGG+TGG	+	Chr1:7961175-7961194	MsG0180000567.01.T01:CDS	45.0%
!!	CATCAAGAGGAAGTGTTGGT+AGG	+	Chr1:7961383-7961402	MsG0180000567.01.T01:CDS	45.0%
!!	CCACCAAAAGCACCATAAAG+AGG	-	Chr1:7961178-7961197	None:intergenic	45.0%
!	AAAGGTGTGCTTGGACTTGG+AGG	-	Chr1:7960750-7960769	None:intergenic	50.0%
!	TGCAAAGGTGTGCTTGGACT+TGG	-	Chr1:7960753-7960772	None:intergenic	50.0%

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	7960699	7961489	7960699	ID=MsG0180000567.01;Name=MsG0180000567.01
Chr1	mRNA	7960699	7961489	7960699	ID=MsG0180000567.01.T01;Parent=MsG0180000567.01;Name=MsG0180000567.01.T01;_AED=0.21;_eAED=0.22;_QI=0\|0\|0\|1\|1\|1\|2\|0\|230
Chr1	exon	7960699	7960933	7960699	ID=MsG0180000567.01.T01:exon:2715;Parent=MsG0180000567.01.T01
Chr1	exon	7961032	7961489	7961032	ID=MsG0180000567.01.T01:exon:2714;Parent=MsG0180000567.01.T01
Chr1	CDS	7960699	7960933	7960699	ID=MsG0180000567.01.T01:cds;Parent=MsG0180000567.01.T01
Chr1	CDS	7961032	7961489	7961032	ID=MsG0180000567.01.T01:cds;Parent=MsG0180000567.01.T01

Gene Sequence

>MsG0180000567.01.T01

ATGGAAAGACTAAGCAAGGAACCATGCATCTTCTCTTCTCAAGAAACTCCTCCAAGTCCAAGCACACCTTTGCAAAATCAACATGAAAAGAAGAAACAACAATCTATTGAGGTAGAAGAAGATATCACTAAGGTAGAAACTTTATTTGATCTAAATGTATCTAGCAATGATTCTAATCTTGATTGTAATAGTCAGCAAGAAACAGAACTCAATCTCATAACTTCTTTAGATGTTGGTGGACACCAAAATGCTCACAAAAGAGAGAGATCAATAGCAAAAAGAGGACAAAGATTTGGAACACAAATAATAGCTTCAGCTTCTGCTTTTGGATTTCCTATTATGCATAATAAACAAAGTTATGCAAACATGGCTTCTTTGCCTCTTTATGGTGCTTTTGGTGGTAATAAACCTCTTGGAATTCAAGCACACTCTATGATCCATAAGCCTTCTCATGTTTCATCTAATGGATTTGGAAACTCTTATGGACATCATCATCATCATGGTTGGTCAAACTCAAGAATCTTTATGGATCAACAACCTGGAATAGCAAAACTAGGTATGGCTGATTTTCATAGAACAACAACATCATCAAGAGGAAGTGTTGGTAGGTTTGAAGTGGTAGATACTATGATTAATTCTGCAGCTAATAAAGAAATGAAGCAGAAGCAGCTTGATTTAAACCTCAAGCTATGA

Protein sequence

>MsG0180000567.01.T01

MERLSKEPCIFSSQETPPSPSTPLQNQHEKKKQQSIEVEEDITKVETLFDLNVSSNDSNLDCNSQQETELNLITSLDVGGHQNAHKRERSIAKRGQRFGTQIIASASAFGFPIMHNKQSYANMASLPLYGAFGGNKPLGIQAHSMIHKPSHVSSNGFGNSYGHHHHHGWSNSRIFMDQQPGIAKLGMADFHRTTTSSRGSVGRFEVVDTMINSAANKEMKQKQLDLNLKL*