AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880046762.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046762.01.T01 MTR_4g114360 100.000 345 0 0 1 345 1 345 0.0 700
MsG0880046762.01.T01 MTR_3g107470 84.302 344 54 0 2 345 6 349 0.0 610
MsG0880046762.01.T01 MTR_0011s0320 83.381 349 53 3 1 344 1 349 0.0 588
MsG0880046762.01.T01 MTR_0662s0010 100.000 277 0 0 1 277 1 277 0.0 556
MsG0880046762.01.T01 MTR_7g110380 44.940 336 181 3 9 343 10 342 3.31e-104 311
MsG0880046762.01.T01 MTR_4g123900 50.000 306 151 2 9 313 6 310 2.70e-98 296
MsG0880046762.01.T01 MTR_4g123900 50.871 287 139 2 9 294 6 291 5.45e-94 282
MsG0880046762.01.T01 MTR_2g070400 43.302 321 179 3 13 331 10 329 1.98e-85 261
MsG0880046762.01.T01 MTR_3g070000 32.441 299 182 6 18 305 29 318 4.55e-33 125
MsG0880046762.01.T01 MTR_8g090130 34.007 297 180 9 18 305 16 305 1.66e-32 123
MsG0880046762.01.T01 MTR_5g081710 32.558 301 183 6 16 305 11 302 3.73e-32 122
MsG0880046762.01.T01 MTR_3g462070 30.693 303 194 6 12 305 8 303 5.23e-31 119
MsG0880046762.01.T01 MTR_1g030320 23.684 342 244 7 3 332 1 337 1.03e-27 111
MsG0880046762.01.T01 MTR_3g072380 23.708 329 239 6 11 332 12 335 2.71e-27 110
MsG0880046762.01.T01 MTR_4g018760 30.928 291 191 5 21 305 20 306 3.77e-27 109
MsG0880046762.01.T01 MTR_8g016090 27.326 344 235 9 8 338 163 504 2.53e-26 109
MsG0880046762.01.T01 MTR_4g101860 28.947 304 202 7 18 313 57 354 1.00e-24 103
MsG0880046762.01.T01 MTR_8g016090 28.302 265 179 6 84 338 191 454 6.40e-20 90.9
MsG0880046762.01.T01 MTR_4g058860 26.957 345 208 15 25 345 22 346 2.38e-18 85.1
MsG0880046762.01.T01 MTR_2g094640 25.449 334 213 13 25 344 22 333 5.53e-18 84.3
MsG0880046762.01.T01 MTR_3g094270 25.723 311 186 12 42 335 37 319 5.47e-15 75.5
MsG0880046762.01.T01 MTR_3g094260 25.161 310 189 10 42 335 37 319 4.62e-14 72.8
MsG0880046762.01.T01 MTR_3g072380 24.859 177 129 3 11 186 12 185 8.19e-13 67.8
MsG0880046762.01.T01 MTR_2g038410 24.768 323 217 9 28 345 69 370 2.85e-12 67.4
MsG0880046762.01.T01 MTR_8g016090 25.275 182 132 3 8 186 163 343 8.29e-12 66.2
MsG0880046762.01.T01 MTR_6g005480 24.920 313 215 8 4 305 104 407 2.46e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046762.01.T01 AT5G25400 81.686 344 63 0 2 345 6 349 0.0 598
MsG0880046762.01.T01 AT4G32390 82.029 345 61 1 2 345 6 350 0.0 593
MsG0880046762.01.T01 AT2G25520 82.558 344 58 1 2 345 6 347 0.0 593
MsG0880046762.01.T01 AT5G11230 79.710 345 69 1 2 345 6 350 0.0 569
MsG0880046762.01.T01 AT3G17430 45.427 328 177 2 9 335 7 333 4.82e-98 295
MsG0880046762.01.T01 AT3G17430 45.427 328 177 2 9 335 7 333 4.82e-98 295
MsG0880046762.01.T01 AT1G48230 46.334 341 169 3 9 336 7 346 1.39e-96 291
MsG0880046762.01.T01 AT3G14410 42.771 332 187 3 4 333 5 335 1.32e-82 254
MsG0880046762.01.T01 AT1G53660 41.390 331 183 6 6 334 9 330 2.38e-82 253
MsG0880046762.01.T01 AT1G53660 41.390 331 183 6 6 334 27 348 4.64e-82 253
MsG0880046762.01.T01 AT1G53660 42.434 304 164 6 33 334 2 296 2.16e-78 242
MsG0880046762.01.T01 AT1G48230 44.891 274 137 3 76 336 1 273 1.98e-74 232
MsG0880046762.01.T01 AT1G53660 42.449 245 131 5 91 334 1 236 1.83e-58 189
MsG0880046762.01.T01 AT1G53660 41.294 201 117 1 5 204 26 226 6.17e-51 170
MsG0880046762.01.T01 AT1G21870 23.810 315 230 5 21 330 22 331 1.29e-30 119
MsG0880046762.01.T01 AT3G11320 31.757 296 188 5 18 305 15 304 1.62e-30 118
MsG0880046762.01.T01 AT5G05820 32.095 296 187 5 18 305 15 304 4.95e-30 117
MsG0880046762.01.T01 AT1G77610 24.383 324 232 6 21 336 16 334 4.50e-29 115
MsG0880046762.01.T01 AT3G10290 30.392 306 197 8 9 305 53 351 4.22e-27 110
MsG0880046762.01.T01 AT5G04160 30.255 314 199 8 3 305 1 305 2.87e-26 106
MsG0880046762.01.T01 AT1G12500 28.065 310 211 6 3 305 48 352 1.28e-23 100
MsG0880046762.01.T01 AT1G06470 25.000 336 232 9 17 335 78 410 6.59e-23 99.0
MsG0880046762.01.T01 AT1G06470 25.000 336 232 9 17 335 78 410 6.59e-23 99.0
MsG0880046762.01.T01 AT1G06470 25.000 336 232 9 17 335 78 410 6.59e-23 99.0
MsG0880046762.01.T01 AT1G06470 25.000 336 232 9 17 335 78 410 6.59e-23 99.0
MsG0880046762.01.T01 AT2G28315 27.187 320 199 13 25 333 22 318 7.74e-19 86.7
MsG0880046762.01.T01 AT2G28315 28.276 290 181 12 25 303 22 295 2.23e-17 82.0
MsG0880046762.01.T01 AT2G30460 27.941 272 165 9 83 336 73 331 9.23e-15 74.7
MsG0880046762.01.T01 AT2G30460 27.941 272 165 9 83 336 73 331 9.23e-15 74.7
MsG0880046762.01.T01 AT2G30460 27.941 272 165 9 83 336 52 310 9.84e-15 74.7
MsG0880046762.01.T01 AT2G30460 27.941 272 165 9 83 336 52 310 9.84e-15 74.7
MsG0880046762.01.T01 AT2G30460 27.941 272 165 9 83 336 52 310 9.84e-15 74.7
MsG0880046762.01.T01 AT1G06890 25.397 315 195 11 42 336 37 331 4.25e-13 70.1
MsG0880046762.01.T01 AT1G06890 25.397 315 195 11 42 336 37 331 4.35e-13 69.7
MsG0880046762.01.T01 AT1G06890 25.397 315 195 11 42 336 37 331 4.70e-13 69.7
MsG0880046762.01.T01 AT1G06890 25.397 315 195 11 42 336 37 331 4.70e-13 69.7
MsG0880046762.01.T01 AT5G33320 24.272 309 220 7 4 305 98 399 8.29e-11 63.2

Find 65 sgRNAs with CRISPR-Local

Find 84 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCATTAATTTGATTGGTTA+TGG 0.206554 8:-77784386 MsG0880046762.01.T01:CDS
GGGTGTTACACTTCAGCTTA+TGG 0.214354 8:-77784753 MsG0880046762.01.T01:CDS
CCCATAACCAATCAAATTAA+TGG 0.216091 8:+77784385 None:intergenic
GGTGTTGCTGTTGCTGCTTA+TGG 0.242108 8:-77784797 MsG0880046762.01.T01:CDS
ATTCTCGTGGTCGGTGATTA+AGG 0.249502 8:-77784420 MsG0880046762.01.T01:CDS
GTGTTGCTGTTGCTGCTTAT+GGG 0.272371 8:-77784796 MsG0880046762.01.T01:CDS
CACTTTACTCGCTTTCGTTA+TGG 0.286530 8:-77784970 MsG0880046762.01.T01:CDS
CCATTAATTTGATTGGTTAT+GGG 0.312965 8:-77784385 MsG0880046762.01.T01:CDS
GTTACACCCATTAATTTGAT+TGG 0.327092 8:-77784392 MsG0880046762.01.T01:CDS
TTCGAAGTTGCAGGCTCTTA+AGG 0.341248 8:-77784330 MsG0880046762.01.T01:CDS
GCTTTGACTATGAATGTTGC+TGG 0.346970 8:-77784470 MsG0880046762.01.T01:CDS
TAGATAAATATACGCAGAAT+TGG 0.353850 8:+77784943 None:intergenic
GGATAACTCAAGTTTCCATT+TGG 0.385544 8:-77784573 MsG0880046762.01.T01:CDS
AAGAGAAATGGAAATCATAT+TGG 0.391631 8:+77784820 None:intergenic
TTCCGATGGCGTTGTGAAGA+AGG 0.398342 8:-77785230 MsG0880046762.01.T01:CDS
GGGAAGCTAAATTTGATACT+TGG 0.404187 8:-77784775 MsG0880046762.01.T01:CDS
TTATAATCATTCGAAGTTGC+AGG 0.406175 8:-77784339 MsG0880046762.01.T01:CDS
TTACATTGCGCCGTGTTGTT+TGG 0.410506 8:-77784642 MsG0880046762.01.T01:CDS
GAATGTTGCTGGGGTTGTTA+AGG 0.411142 8:-77784459 MsG0880046762.01.T01:CDS
AATATGATTTCCATTTCTCT+TGG 0.417528 8:-77784818 MsG0880046762.01.T01:CDS
CCATAACCAATCAAATTAAT+GGG 0.419392 8:+77784386 None:intergenic
TCGACGAGTTGAATCAGTTC+TGG 0.421300 8:+77784210 None:intergenic
CATACACCTACGTCGCAATC+TGG 0.421498 8:-77785198 MsG0880046762.01.T01:CDS
CCTGTTGCTGTTTATTCGAT+TGG 0.427774 8:-77784884 MsG0880046762.01.T01:CDS
ATGTAATACAACGAAGTAAT+CGG 0.430025 8:+77784659 None:intergenic
AACAGCAACACCAAGAGAAA+TGG 0.430794 8:+77784808 None:intergenic
TGAATCATGGTTAGAGAGAT+CGG 0.453928 8:+77785103 None:intergenic
CTTTGACTATGAATGTTGCT+GGG 0.457141 8:-77784469 MsG0880046762.01.T01:CDS
CTCAAATCTGTTGTTCCAAT+CGG 0.464601 8:-77784995 MsG0880046762.01.T01:CDS
AGATCGCGTGACATTGAAAC+AGG 0.469171 8:+77785022 None:intergenic
GGAAGCTAAATTTGATACTT+GGG 0.472356 8:-77784774 MsG0880046762.01.T01:CDS
TAGATCGTAAGATGTACAAT+TGG 0.478800 8:-77785132 MsG0880046762.01.T01:CDS
TTGAGCCTTCTTCTGCGTCT+CGG 0.479012 8:+77784304 None:intergenic
CCAATCGAATAAACAGCAAC+AGG 0.480862 8:+77784884 None:intergenic
TAATTTGATTGGTTATGGGT+TGG 0.492341 8:-77784381 MsG0880046762.01.T01:CDS
TTGCTGGGGTTGTTAAGGAT+TGG 0.496578 8:-77784454 MsG0880046762.01.T01:CDS
GTATTTGTTGTAAACGATAA+CGG 0.498137 8:+77785159 None:intergenic
AGCGAGTAAAGTGCACCGAT+TGG 0.499200 8:+77784980 None:intergenic
TGAAGAGGCTGGAAGGTTGT+TGG 0.507877 8:-77784273 MsG0880046762.01.T01:CDS
GGCTTCCGAGACGCAGAAGA+AGG 0.521970 8:-77784309 MsG0880046762.01.T01:CDS
AGGTTGTTGGAACAGAGAGA+TGG 0.527055 8:-77784260 MsG0880046762.01.T01:CDS
CAGAGAGATGGAGAAGGGAC+TGG 0.531231 8:-77784248 MsG0880046762.01.T01:CDS
GAATCATGGTTAGAGAGATC+GGG 0.533528 8:+77785104 None:intergenic
CAACAGAGTGATGAAGAGGC+TGG 0.548342 8:-77784284 MsG0880046762.01.T01:CDS
GTTGATTGCATTCTCGTGGT+CGG 0.553496 8:-77784429 MsG0880046762.01.T01:CDS
TGTTGAGTATCCTTCGTTGA+GGG 0.554979 8:-77784594 MsG0880046762.01.T01:CDS
GGCTCAACAGAGTGATGAAG+AGG 0.559642 8:-77784288 MsG0880046762.01.T01:CDS
TTGTTGAGTATCCTTCGTTG+AGG 0.563149 8:-77784595 MsG0880046762.01.T01:CDS
ATGGTTAGAGAGATCGGGTA+AGG 0.564381 8:+77785109 None:intergenic
TGTTGCTGTTGCTGCTTATG+GGG 0.565614 8:-77784795 MsG0880046762.01.T01:CDS
GAGATGGAGAAGGGACTGGA+AGG 0.571557 8:-77784244 MsG0880046762.01.T01:CDS
AACCTTCTTCACAACGCCAT+CGG 0.572106 8:+77785228 None:intergenic
CTCTCTAACCATGATTCACA+TGG 0.588163 8:-77785098 MsG0880046762.01.T01:CDS
TTTGTTGGTTGGGAAGACGT+CGG 0.592329 8:-77784492 MsG0880046762.01.T01:CDS
TTGGAACAGAGAGATGGAGA+AGG 0.602800 8:-77784254 MsG0880046762.01.T01:CDS
AGAGTGATGAAGAGGCTGGA+AGG 0.603959 8:-77784280 MsG0880046762.01.T01:CDS
GGTTGTTGATTGCATTCTCG+TGG 0.604485 8:-77784433 MsG0880046762.01.T01:CDS
GAAGATCCAGATTGCGACGT+AGG 0.612548 8:+77785192 None:intergenic
GAAGCTAAATTTGATACTTG+GGG 0.628264 8:-77784773 MsG0880046762.01.T01:CDS
TGGAACAGAGAGATGGAGAA+GGG 0.630504 8:-77784253 MsG0880046762.01.T01:CDS
GGATACTCAACAATAAGCCA+AGG 0.631347 8:+77784605 None:intergenic
AAACGATAACGGTGAAGCTG+AGG 0.632551 8:+77785170 None:intergenic
TTGCGACGTAGGTGTATGAG+AGG 0.648256 8:+77785203 None:intergenic
TTTGACTATGAATGTTGCTG+GGG 0.655153 8:-77784468 MsG0880046762.01.T01:CDS
CTTGAGTTATCCCTCAACGA+AGG 0.699678 8:+77784584 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AAGAGAAATGGAAATCATAT+TGG + Chr8:77784644-77784663 None:intergenic 25.0%
! AATATGATTTCCATTTCTCT+TGG - Chr8:77784643-77784662 MsG0880046762.01.T01:CDS 25.0%
! ATGTAATACAACGAAGTAAT+CGG + Chr8:77784805-77784824 None:intergenic 25.0%
! CCATAACCAATCAAATTAAT+GGG + Chr8:77785078-77785097 None:intergenic 25.0%
! TAGATAAATATACGCAGAAT+TGG + Chr8:77784521-77784540 None:intergenic 25.0%
!! CCATTAATTTGATTGGTTAT+GGG - Chr8:77785076-77785095 MsG0880046762.01.T01:CDS 25.0%
!!! AGGTTTTAAGAATGAAACTA+TGG - Chr8:77784618-77784637 MsG0880046762.01.T01:CDS 25.0%
!!! GTATTTGTTGTAAACGATAA+CGG + Chr8:77784305-77784324 None:intergenic 25.0%
CCCATAACCAATCAAATTAA+TGG + Chr8:77785079-77785098 None:intergenic 30.0%
GAAGCTAAATTTGATACTTG+GGG - Chr8:77784688-77784707 MsG0880046762.01.T01:CDS 30.0%
GGAAGCTAAATTTGATACTT+GGG - Chr8:77784687-77784706 MsG0880046762.01.T01:CDS 30.0%
TAGATCGTAAGATGTACAAT+TGG - Chr8:77784329-77784348 MsG0880046762.01.T01:CDS 30.0%
TTATAATCATTCGAAGTTGC+AGG - Chr8:77785122-77785141 MsG0880046762.01.T01:CDS 30.0%
! AGATTTTGCTTAATTCGAAG+GGG - Chr8:77784767-77784786 MsG0880046762.01.T01:CDS 30.0%
! ATTTGGATTTCGCGATTTTT+GGG - Chr8:77784905-77784924 MsG0880046762.01.T01:CDS 30.0%
! CAGATTTTGCTTAATTCGAA+GGG - Chr8:77784766-77784785 MsG0880046762.01.T01:CDS 30.0%
! CCCATTAATTTGATTGGTTA+TGG - Chr8:77785075-77785094 MsG0880046762.01.T01:CDS 30.0%
! GTTACACCCATTAATTTGAT+TGG - Chr8:77785069-77785088 MsG0880046762.01.T01:CDS 30.0%
! TAATTTGATTGGTTATGGGT+TGG - Chr8:77785080-77785099 MsG0880046762.01.T01:CDS 30.0%
! TCAGATTTTGCTTAATTCGA+AGG - Chr8:77784765-77784784 MsG0880046762.01.T01:CDS 30.0%
!!! GGTGTTTTGTTTAAGAAAGA+AGG - Chr8:77784598-77784617 MsG0880046762.01.T01:CDS 30.0%
ACAAAAAGCCATGTGAATCA+TGG + Chr8:77784374-77784393 None:intergenic 35.0%
CAAAAATCGCGAAATCCAAA+TGG + Chr8:77784906-77784925 None:intergenic 35.0%
CTCAAATCTGTTGTTCCAAT+CGG - Chr8:77784466-77784485 MsG0880046762.01.T01:CDS 35.0%
CTTTGACTATGAATGTTGCT+GGG - Chr8:77784992-77785011 MsG0880046762.01.T01:CDS 35.0%
GACAAAAACACCAAACAACA+CGG + Chr8:77784832-77784851 None:intergenic 35.0%
GGATAACTCAAGTTTCCATT+TGG - Chr8:77784888-77784907 MsG0880046762.01.T01:CDS 35.0%
GGGAAGCTAAATTTGATACT+TGG - Chr8:77784686-77784705 MsG0880046762.01.T01:CDS 35.0%
TGAATCATGGTTAGAGAGAT+CGG + Chr8:77784361-77784380 None:intergenic 35.0%
TTTGACTATGAATGTTGCTG+GGG - Chr8:77784993-77785012 MsG0880046762.01.T01:CDS 35.0%
! CATTTGGATTTCGCGATTTT+TGG - Chr8:77784904-77784923 MsG0880046762.01.T01:CDS 35.0%
AACAGCAACACCAAGAGAAA+TGG + Chr8:77784656-77784675 None:intergenic 40.0%
CACTTTACTCGCTTTCGTTA+TGG - Chr8:77784491-77784510 MsG0880046762.01.T01:CDS 40.0%
CCAATCGAATAAACAGCAAC+AGG + Chr8:77784580-77784599 None:intergenic 40.0%
CTCTCTAACCATGATTCACA+TGG - Chr8:77784363-77784382 MsG0880046762.01.T01:CDS 40.0%
CTTCCCAACCAACAAAAACA+CGG + Chr8:77784965-77784984 None:intergenic 40.0%
GAATCATGGTTAGAGAGATC+GGG + Chr8:77784360-77784379 None:intergenic 40.0%
GCTTTGACTATGAATGTTGC+TGG - Chr8:77784991-77785010 MsG0880046762.01.T01:CDS 40.0%
GGATACTCAACAATAAGCCA+AGG + Chr8:77784859-77784878 None:intergenic 40.0%
TGTTGAGTATCCTTCGTTGA+GGG - Chr8:77784867-77784886 MsG0880046762.01.T01:CDS 40.0%
TTGTTGAGTATCCTTCGTTG+AGG - Chr8:77784866-77784885 MsG0880046762.01.T01:CDS 40.0%
!! CCTGTTGCTGTTTATTCGAT+TGG - Chr8:77784577-77784596 MsG0880046762.01.T01:CDS 40.0%
!! GAATCTTGCCGTGTTTTTGT+TGG - Chr8:77784954-77784973 MsG0880046762.01.T01:CDS 40.0%
!! TGGTGTTTTTGTCTGTTCCT+TGG - Chr8:77784839-77784858 MsG0880046762.01.T01:CDS 40.0%
!! TTGCCGTGTTTTTGTTGGTT+GGG - Chr8:77784959-77784978 MsG0880046762.01.T01:CDS 40.0%
!!! TGCTTTTGAAGCTACACGTT+TGG - Chr8:77784735-77784754 MsG0880046762.01.T01:CDS 40.0%
AACCTTCTTCACAACGCCAT+CGG + Chr8:77784236-77784255 None:intergenic 45.0%
AGATCGCGTGACATTGAAAC+AGG + Chr8:77784442-77784461 None:intergenic 45.0%
AGGTTGTTGGAACAGAGAGA+TGG - Chr8:77785201-77785220 MsG0880046762.01.T01:CDS 45.0%
ATGGTTAGAGAGATCGGGTA+AGG + Chr8:77784355-77784374 None:intergenic 45.0%
ATTCTCGTGGTCGGTGATTA+AGG - Chr8:77785041-77785060 MsG0880046762.01.T01:CDS 45.0%
CTTGAGTTATCCCTCAACGA+AGG + Chr8:77784880-77784899 None:intergenic 45.0%
GAATGTTGCTGGGGTTGTTA+AGG - Chr8:77785002-77785021 MsG0880046762.01.T01:CDS 45.0%
GTTGATTGCATTCTCGTGGT+CGG - Chr8:77785032-77785051 MsG0880046762.01.T01:CDS 45.0%
TGGAACAGAGAGATGGAGAA+GGG - Chr8:77785208-77785227 MsG0880046762.01.T01:CDS 45.0%
TTCGAAGTTGCAGGCTCTTA+AGG - Chr8:77785131-77785150 MsG0880046762.01.T01:CDS 45.0%
TTGCTGGGGTTGTTAAGGAT+TGG - Chr8:77785007-77785026 MsG0880046762.01.T01:CDS 45.0%
TTGGAACAGAGAGATGGAGA+AGG - Chr8:77785207-77785226 MsG0880046762.01.T01:CDS 45.0%
! AAACGATAACGGTGAAGCTG+AGG + Chr8:77784294-77784313 None:intergenic 45.0%
! GGGTGTTACACTTCAGCTTA+TGG - Chr8:77784708-77784727 MsG0880046762.01.T01:CDS 45.0%
! GGTTGTTGATTGCATTCTCG+TGG - Chr8:77785028-77785047 MsG0880046762.01.T01:CDS 45.0%
! GTGTTGCTGTTGCTGCTTAT+GGG - Chr8:77784665-77784684 MsG0880046762.01.T01:CDS 45.0%
! TGTTGCTGTTGCTGCTTATG+GGG - Chr8:77784666-77784685 MsG0880046762.01.T01:CDS 45.0%
! TTACATTGCGCCGTGTTGTT+TGG - Chr8:77784819-77784838 MsG0880046762.01.T01:CDS 45.0%
! TTTGTTGGTTGGGAAGACGT+CGG - Chr8:77784969-77784988 MsG0880046762.01.T01:CDS 45.0%
!! CTTGCCGTGTTTTTGTTGGT+TGG - Chr8:77784958-77784977 MsG0880046762.01.T01:CDS 45.0%
!!! GGTTATGGGTTGGCGTTTTT+GGG - Chr8:77785090-77785109 MsG0880046762.01.T01:CDS 45.0%
!!! GTTATGGGTTGGCGTTTTTG+GGG - Chr8:77785091-77785110 MsG0880046762.01.T01:CDS 45.0%
!!! TGGTTATGGGTTGGCGTTTT+TGG - Chr8:77785089-77785108 MsG0880046762.01.T01:CDS 45.0%
!!! TTATGGGTTGGCGTTTTTGG+GGG - Chr8:77785092-77785111 MsG0880046762.01.T01:CDS 45.0%
AGAGTGATGAAGAGGCTGGA+AGG - Chr8:77785181-77785200 MsG0880046762.01.T01:CDS 50.0%
CAACAGAGTGATGAAGAGGC+TGG - Chr8:77785177-77785196 MsG0880046762.01.T01:CDS 50.0%
CATACACCTACGTCGCAATC+TGG - Chr8:77784263-77784282 MsG0880046762.01.T01:CDS 50.0%
GAAGATCCAGATTGCGACGT+AGG + Chr8:77784272-77784291 None:intergenic 50.0%
GGCTCAACAGAGTGATGAAG+AGG - Chr8:77785173-77785192 MsG0880046762.01.T01:CDS 50.0%
TGAAGAGGCTGGAAGGTTGT+TGG - Chr8:77785188-77785207 MsG0880046762.01.T01:CDS 50.0%
TTCCGATGGCGTTGTGAAGA+AGG - Chr8:77784231-77784250 MsG0880046762.01.T01:CDS 50.0%
TTGAGCCTTCTTCTGCGTCT+CGG + Chr8:77785160-77785179 None:intergenic 50.0%
TTGCGACGTAGGTGTATGAG+AGG + Chr8:77784261-77784280 None:intergenic 50.0%
! AGCGAGTAAAGTGCACCGAT+TGG + Chr8:77784484-77784503 None:intergenic 50.0%
!! GGTGTTGCTGTTGCTGCTTA+TGG - Chr8:77784664-77784683 MsG0880046762.01.T01:CDS 50.0%
CAGAGAGATGGAGAAGGGAC+TGG - Chr8:77785213-77785232 MsG0880046762.01.T01:CDS 55.0%
GAGATGGAGAAGGGACTGGA+AGG - Chr8:77785217-77785236 MsG0880046762.01.T01:CDS 55.0%
GGCTTCCGAGACGCAGAAGA+AGG - Chr8:77785152-77785171 MsG0880046762.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 77784223 77785260 77784223 ID=MsG0880046762.01;Name=MsG0880046762.01
Chr8 mRNA 77784223 77785260 77784223 ID=MsG0880046762.01.T01;Parent=MsG0880046762.01;Name=MsG0880046762.01.T01;_AED=0.26;_eAED=0.26;_QI=0|-1|0|1|-1|1|1|0|345
Chr8 exon 77784223 77785260 77784223 ID=MsG0880046762.01.T01:exon:33278;Parent=MsG0880046762.01.T01
Chr8 CDS 77784223 77785260 77784223 ID=MsG0880046762.01.T01:cds;Parent=MsG0880046762.01.T01
Gene Sequence

>MsG0880046762.01.T01

ATGGCGGTTTCCGATGGCGTTGTGAAGAAGGTTATCCTCTCATACACCTACGTCGCAATCTGGATCTTCCTCAGCTTCACCGTTATCGTTTACAACAAATACATCTTAGATCGTAAGATGTACAATTGGCCTTACCCGATCTCTCTAACCATGATTCACATGGCTTTTTGTTCTTCACTCGCTTACGTTCTCGTTCGTGTTTTCAAGCTTGTTGAACCTGTTTCAATGTCACGCGATCTGTATCTCAAATCTGTTGTTCCAATCGGTGCACTTTACTCGCTTTCGTTATGGTTTTCCAATTCTGCGTATATTTATCTATCTGTTTCGTTTATTCAGATGCTGAAAGCGCTTATGCCTGTTGCTGTTTATTCGATTGGTGTTTTGTTTAAGAAAGAAGGTTTTAAGAATGAAACTATGGCCAATATGATTTCCATTTCTCTTGGTGTTGCTGTTGCTGCTTATGGGGAAGCTAAATTTGATACTTGGGGTGTTACACTTCAGCTTATGGCTGTTGCTTTTGAAGCTACACGTTTGGTTTTGATTCAGATTTTGCTTAATTCGAAGGGGATTTCGTTGAATCCGATTACTTCGTTGTATTACATTGCGCCGTGTTGTTTGGTGTTTTTGTCTGTTCCTTGGCTTATTGTTGAGTATCCTTCGTTGAGGGATAACTCAAGTTTCCATTTGGATTTCGCGATTTTTGGGACAAATTCGCTATGTGCTTTTGCTTTGAATCTTGCCGTGTTTTTGTTGGTTGGGAAGACGTCGGCTTTGACTATGAATGTTGCTGGGGTTGTTAAGGATTGGTTGTTGATTGCATTCTCGTGGTCGGTGATTAAGGATACTGTTACACCCATTAATTTGATTGGTTATGGGTTGGCGTTTTTGGGGGTTGCGTATTATAATCATTCGAAGTTGCAGGCTCTTAAGGCTTCCGAGACGCAGAAGAAGGCTCAACAGAGTGATGAAGAGGCTGGAAGGTTGTTGGAACAGAGAGATGGAGAAGGGACTGGAAGGAAGAGCGACAGCCAGAACTGA

Protein sequence

>MsG0880046762.01.T01

MAVSDGVVKKVILSYTYVAIWIFLSFTVIVYNKYILDRKMYNWPYPISLTMIHMAFCSSLAYVLVRVFKLVEPVSMSRDLYLKSVVPIGALYSLSLWFSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKEGFKNETMANMISISLGVAVAAYGEAKFDTWGVTLQLMAVAFEATRLVLIQILLNSKGISLNPITSLYYIAPCCLVFLSVPWLIVEYPSLRDNSSFHLDFAIFGTNSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLIGYGLAFLGVAYYNHSKLQALKASETQKKAQQSDEEAGRLLEQRDGEGTGRKSDSQN*