AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280009514.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009514.01.T01 MTR_2g067760 90.957 376 6 2 1 376 1 348 0.0 691
MsG0280009514.01.T01 MTR_2g101400 57.143 364 125 4 16 374 7 344 4.38e-149 425
MsG0280009514.01.T01 MTR_7g086110 59.593 344 110 4 32 372 4 321 6.51e-142 406
MsG0280009514.01.T01 MTR_2g451450 60.635 315 123 1 20 333 17 331 1.47e-139 400
MsG0280009514.01.T01 MTR_2g451450 66.667 216 72 0 118 333 1 216 2.85e-104 307
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280009514.01.T01 AT1G54320 70.141 355 78 3 23 376 22 349 5.73e-179 501
MsG0280009514.01.T01 AT1G16360 63.904 374 107 3 3 375 2 348 1.21e-174 490
MsG0280009514.01.T01 AT3G12740 68.169 355 85 3 23 376 23 350 7.93e-173 485
MsG0280009514.01.T01 AT1G79450 64.706 374 104 3 3 375 2 348 3.59e-172 484
MsG0280009514.01.T01 AT1G16360 65.507 345 91 3 32 375 17 334 8.13e-165 464
MsG0280009514.01.T01 AT1G16360 69.836 305 90 2 32 335 17 320 1.29e-159 451
MsG0280009514.01.T01 AT1G79450 66.556 302 73 3 75 375 7 281 1.23e-142 406
MsG0280009514.01.T01 AT5G46150 54.128 327 145 2 12 333 3 329 2.65e-127 369
MsG0280009514.01.T01 AT5G46150 54.128 327 145 2 12 333 3 329 6.47e-127 369
MsG0280009514.01.T01 AT5G46150 54.128 327 145 2 12 333 3 329 6.47e-127 369
MsG0280009514.01.T01 AT1G16360 65.385 208 70 2 32 238 17 223 2.01e-95 285
MsG0280009514.01.T01 AT1G16360 65.385 208 70 2 32 238 17 223 2.01e-95 285
MsG0280009514.01.T01 AT5G46150 51.515 231 107 2 12 237 3 233 9.25e-83 253

Find 136 sgRNAs with CRISPR-Local

Find 458 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTATGGCCTGCTTTACTTTC+TGG 0.147784 2:+53449145 MsG0280009514.01.T01:three_prime_UTR
AAGCCTTGTAATATTGAAAA+TGG 0.171467 2:-53447990 None:intergenic
CCACCTCTAAATCGTGTTTA+AGG 0.185925 2:-53449306 None:intergenic
AGAGAGGGAGTATTTGTTTC+AGG 0.214632 2:-53448190 None:intergenic
ATCGATCTCAGATTGAAAAT+TGG 0.220296 2:-53442524 None:intergenic
ATTCGATTCCGATTCATAAA+TGG 0.243648 2:+53442550 MsG0280009514.01.T01:exon
CAGGTTGTTGAAATTGTTTA+TGG 0.247565 2:+53444399 MsG0280009514.01.T01:intron
TTCTCCATGGTTTGAATGAT+TGG 0.267008 2:-53449412 None:intergenic
ATGATTGGTTTAGCATGTTT+TGG 0.302682 2:-53449397 None:intergenic
AGTGATAGGGAGCACAAATT+TGG 0.303708 2:+53445906 MsG0280009514.01.T01:CDS
ACATCTACTTAACTACTTAC+TGG 0.307573 2:+53448045 MsG0280009514.01.T01:three_prime_UTR
ATATGTATGATTATGATAAT+AGG 0.308189 2:-53449277 None:intergenic
TTGCATACCGGCGATGATTC+TGG 0.314059 2:-53444672 None:intergenic
GCAGCAGCAGCAGAAGCTCC+TGG 0.315670 2:+53442590 MsG0280009514.01.T01:CDS
CCCTAGAAAATGAAGAGAAT+TGG 0.323325 2:-53442492 None:intergenic
TATCGGAGTTGCTTCGCTAA+TGG 0.328460 2:+53444275 MsG0280009514.01.T01:CDS
CCTAGAAAATGAAGAGAATT+GGG 0.332768 2:-53442491 None:intergenic
TGTCTCCCTGCAGGTTATTT+CGG 0.333817 2:+53444221 MsG0280009514.01.T01:intron
CTGTTATTTGCAGTATCTTC+AGG 0.335452 2:-53445774 None:intergenic
TTCCAGAATGGTTCTATAAT+AGG 0.338624 2:+53445951 MsG0280009514.01.T01:CDS
GCATCTCCTGGAAGAGTGAT+AGG 0.345405 2:+53445892 MsG0280009514.01.T01:CDS
TTACCTTAAACACGATTTAG+AGG 0.351367 2:+53449303 MsG0280009514.01.T01:three_prime_UTR
AGCTGATAGTATACATAAAT+AGG 0.366101 2:-53444637 None:intergenic
AATTGAAAAGAAATATTAGT+TGG 0.370021 2:-53448312 None:intergenic
GTACGGTACCCAGTACGATA+TGG 0.371699 2:+53447074 MsG0280009514.01.T01:CDS
GTGCTCCCTATCACTCTTCC+AGG 0.372048 2:-53445898 None:intergenic
AACGCAGTCATGTTTGGTTC+AGG 0.379391 2:-53448855 None:intergenic
CACCTATTATAGAACCATTC+TGG 0.379889 2:-53445953 None:intergenic
CATCATATTTGTCATGGAAT+AGG 0.380885 2:+53447915 MsG0280009514.01.T01:CDS
CTGAAGATACTGCAAATAAC+AGG 0.383558 2:+53445775 MsG0280009514.01.T01:CDS
TCGAAAGTAACGTTGTTTGC+AGG 0.389262 2:+53448537 MsG0280009514.01.T01:three_prime_UTR
CCATATAACTTCCTAAAAGT+TGG 0.396101 2:-53446410 None:intergenic
AGGTTGTTGAAATTGTTTAT+GGG 0.407143 2:+53444400 MsG0280009514.01.T01:intron
TACCTTGTGGTCTCATAGCT+TGG 0.407481 2:+53445805 MsG0280009514.01.T01:CDS
TATGTAAGTATATATATAAT+AGG 0.408006 2:+53448751 MsG0280009514.01.T01:three_prime_UTR
GGCATTGCTTATCTCACTGT+TGG 0.409859 2:+53446572 MsG0280009514.01.T01:CDS
CGTCAACCTCCAACGATGTA+TGG 0.418456 2:+53449128 MsG0280009514.01.T01:three_prime_UTR
TGTTCAAACGCAGTCATGTT+TGG 0.421677 2:-53448861 None:intergenic
AAAAGTTGACTTGGGCAGTT+TGG 0.426383 2:-53442437 None:intergenic
CGTCAAATTTGTATTGTTGA+CGG 0.430499 2:-53445856 None:intergenic
ACGTTGTTTGCAGGCTGGTT+TGG 0.432896 2:+53448546 MsG0280009514.01.T01:three_prime_UTR
TATAACACATACAGTTTCAA+TGG 0.439187 2:+53446491 MsG0280009514.01.T01:CDS
GTATGAGTCAGACTGCTTAC+CGG 0.440324 2:+53444422 MsG0280009514.01.T01:CDS
TTCATTCTTTGTAGGCAACT+TGG 0.442644 2:+53447887 MsG0280009514.01.T01:intron
CTTGGTTATTCTACAGTGGC+AGG 0.447008 2:+53448010 MsG0280009514.01.T01:three_prime_UTR
ATTGCTTATCTCACTGTTGG+AGG 0.447358 2:+53446575 MsG0280009514.01.T01:CDS
TTTAGGATCGCAGTTTGGTC+TGG 0.448080 2:-53448510 None:intergenic
TACAAGTAATGTATAAATAG+TGG 0.450215 2:+53449372 MsG0280009514.01.T01:three_prime_UTR
GGTCACTCACATGTCTAATT+CGG 0.455731 2:-53448793 None:intergenic
TTCGCTAATGGCTTCAAGAA+AGG 0.457194 2:+53444287 MsG0280009514.01.T01:CDS
ATTGAAAAGAAATATTAGTT+GGG 0.463869 2:-53448311 None:intergenic
CTACTACTAGCTGGCTTGGT+GGG 0.464976 2:+53446534 MsG0280009514.01.T01:CDS
TACGAGCATGATCTCATTGT+TGG 0.465473 2:+53449437 MsG0280009514.01.T01:three_prime_UTR
TGGGTACCGGTACGAGAATA+CGG 0.466193 2:+53447094 MsG0280009514.01.T01:CDS
ACCGCTCGAGGTGTAAGAAT+AGG 0.473978 2:-53444092 None:intergenic
AATAGGTGATTTCATGTGCT+TGG 0.475930 2:-53444620 None:intergenic
GTCACAGGGAGATGAAGAAA+TGG 0.477589 2:-53448692 None:intergenic
CGTCAACAATACAAATTTGA+CGG 0.477985 2:+53445857 MsG0280009514.01.T01:CDS
AGCAGGAGGATCTTATTGTC+TGG 0.479332 2:+53446369 MsG0280009514.01.T01:CDS
GCAGTGGAATCGGCAGATCC+AGG 0.480044 2:-53442608 None:intergenic
TACCGGTACCCATATCGTAC+TGG 0.481496 2:-53447083 None:intergenic
TATGGAACAGTTGAATGAGC+AGG 0.483440 2:+53446352 MsG0280009514.01.T01:intron
AGCCTTGTAATATTGAAAAT+GGG 0.483657 2:-53447989 None:intergenic
TCTTCTTGGAGCAGTGGAAT+CGG 0.485941 2:-53442618 None:intergenic
CTTACTGAGTTCTCTCCCTT+AGG 0.490717 2:-53445741 None:intergenic
CTATTCCATGACAAATATGA+TGG 0.491865 2:-53447914 None:intergenic
AAGTAACGTTGTTTGCAGGC+TGG 0.496367 2:+53448541 MsG0280009514.01.T01:three_prime_UTR
TAACTTCCTAAAAGTTGGTA+AGG 0.500049 2:-53446405 None:intergenic
TGAACAAGAAAGGCATCTCC+TGG 0.500765 2:+53445880 MsG0280009514.01.T01:CDS
GTCGAAGTGATGAGCAATTG+AGG 0.506813 2:+53445715 MsG0280009514.01.T01:CDS
ACCTCGTCTTTAGTGCCATC+CGG 0.507629 2:-53444441 None:intergenic
GAGATCCATCATATTTGTCA+TGG 0.508248 2:+53447909 MsG0280009514.01.T01:CDS
GGTGGGAAGAATGATTTCCT+TGG 0.509013 2:+53446551 MsG0280009514.01.T01:CDS
AATTTCGTTCTCAAAGTCAC+AGG 0.509177 2:-53448707 None:intergenic
GGAAGACGCCATTTATGAAT+CGG 0.511485 2:-53442558 None:intergenic
ACGTTGCATTATGGTACAAT+TGG 0.512980 2:-53448633 None:intergenic
TTTCAAGTGTTACATCTATG+AGG 0.517582 2:-53446463 None:intergenic
AGTAACGGTGTTCATCAGCT+TGG 0.517733 2:+53448481 MsG0280009514.01.T01:three_prime_UTR
ATAGAGGTGGATTTGAATCA+AGG 0.521775 2:+53446437 MsG0280009514.01.T01:CDS
TGTGTTTCTTCTTGGAGCAG+TGG 0.523525 2:-53442624 None:intergenic
AGTGTTGTGTTCATTCCTAT+CGG 0.524757 2:+53444258 MsG0280009514.01.T01:CDS
TACGGTACCCAGTACGATAT+GGG 0.528165 2:+53447075 MsG0280009514.01.T01:CDS
GAAGTTATATGGAAAGATAG+AGG 0.534995 2:+53446421 MsG0280009514.01.T01:CDS
AAATTACCGTATTCTCGTAC+CGG 0.537196 2:-53447100 None:intergenic
AATTTGACGGTGAACAAGAA+AGG 0.544214 2:+53445870 MsG0280009514.01.T01:CDS
ACATGACTGCGTTTGAACAA+TGG 0.550023 2:+53448865 MsG0280009514.01.T01:three_prime_UTR
GTAAGAATAGGCTTGCAAGC+TGG 0.553416 2:-53444080 None:intergenic
CTGTCTACTACTAGCTGGCT+TGG 0.554578 2:+53446530 MsG0280009514.01.T01:CDS
GAATTTCCAGAAAGTAAAGC+AGG 0.562595 2:-53449151 None:intergenic
TGAGCAATTGAGGAGTCCTA+AGG 0.562902 2:+53445725 MsG0280009514.01.T01:CDS
TTGGGCAGTTTGGTGTAAAG+TGG 0.567417 2:-53442427 None:intergenic
GAGCAATTGAGGAGTCCTAA+GGG 0.567682 2:+53445726 MsG0280009514.01.T01:CDS
TCATGCTCGTACCTTCTCCA+TGG 0.573023 2:-53449425 None:intergenic
AGCAGGCCATACATCGTTGG+AGG 0.573036 2:-53449134 None:intergenic
TCTACTACTAGCTGGCTTGG+TGG 0.574076 2:+53446533 MsG0280009514.01.T01:CDS
CCTAAAAGTTGGTAAGGCAG+CGG 0.576352 2:-53446399 None:intergenic
GCAGTTTGGTGTAAAGTGGA+AGG 0.581333 2:-53442423 None:intergenic
TGAGTATACACATGGAGAGA+GGG 0.583434 2:-53448205 None:intergenic
TCGTACTGTCTACTACTAGC+TGG 0.586718 2:+53446525 MsG0280009514.01.T01:CDS
TACATCGTTGGAGGTTGACG+AGG 0.587046 2:-53449125 None:intergenic
GCATCAGAATTTAAATACAC+TGG 0.587795 2:+53448145 MsG0280009514.01.T01:three_prime_UTR
GAGAATGCAAGTACGTACCT+TGG 0.588802 2:-53446647 None:intergenic
TAAAGCAGGCCATACATCGT+TGG 0.594640 2:-53449137 None:intergenic
CATCTCCTGGAAGAGTGATA+GGG 0.595404 2:+53445893 MsG0280009514.01.T01:CDS
ACTGGTATGTTATAATCTCG+TGG 0.599655 2:+53448163 MsG0280009514.01.T01:three_prime_UTR
ACCGGTACCCATATCGTACT+GGG 0.605462 2:-53447082 None:intergenic
ACATCTTAATGAATCGATAC+CGG 0.606029 2:+53445980 MsG0280009514.01.T01:CDS
ATTAGCGAAGCAACTCCGAT+AGG 0.608650 2:-53444273 None:intergenic
TTGAGTATACACATGGAGAG+AGG 0.608874 2:-53448206 None:intergenic
CCTTAAACACGATTTAGAGG+TGG 0.613362 2:+53449306 MsG0280009514.01.T01:three_prime_UTR
CAGTGAGATAAGCAATGCCA+AGG 0.614950 2:-53446568 None:intergenic
AATCATTCAAACCATGGAGA+AGG 0.616292 2:+53449414 MsG0280009514.01.T01:three_prime_UTR
ATTTCGTTCTCAAAGTCACA+GGG 0.617658 2:-53448706 None:intergenic
CTCCAAGCTATGAGACCACA+AGG 0.620952 2:-53445807 None:intergenic
ACCCAGTACGATATGGGTAC+CGG 0.621553 2:+53447081 MsG0280009514.01.T01:CDS
GCCTATTCTTACACCTCGAG+CGG 0.621999 2:+53444091 MsG0280009514.01.T01:CDS
ATGTTGCATAGGTATGGGTA+CGG 0.622612 2:+53447057 MsG0280009514.01.T01:intron
CAGAATGGTTCTATAATAGG+TGG 0.623008 2:+53445954 MsG0280009514.01.T01:CDS
AACAGGTCAATTGTACCTTG+TGG 0.623062 2:+53445792 MsG0280009514.01.T01:CDS
TGGCTTGACAAAATATACAA+TGG 0.626612 2:-53446627 None:intergenic
ACAATTGGTGTGAAAGACTC+AGG 0.626967 2:-53448618 None:intergenic
CTAGAAAATGAAGAGAATTG+GGG 0.628989 2:-53442490 None:intergenic
ATGATTATGATAATAGGACG+AGG 0.642312 2:-53449271 None:intergenic
GTTATATGGAAAGATAGAGG+TGG 0.643018 2:+53446424 MsG0280009514.01.T01:CDS
GAGTCAGACTGCTTACCGGA+TGG 0.645552 2:+53444426 MsG0280009514.01.T01:CDS
GGAACAGTTGAATGAGCAGG+AGG 0.647507 2:+53446355 MsG0280009514.01.T01:intron
TAAACCAATCATTCAAACCA+TGG 0.647741 2:+53449408 MsG0280009514.01.T01:three_prime_UTR
CATGGAATAGGAACCAAGGA+GGG 0.649024 2:+53447927 MsG0280009514.01.T01:CDS
TGATTATGATAATAGGACGA+GGG 0.654561 2:-53449270 None:intergenic
GAGATGATTGAGTATACACA+TGG 0.664297 2:-53448213 None:intergenic
TTGTCATGGAATAGGAACCA+AGG 0.667669 2:+53447923 MsG0280009514.01.T01:CDS
AAGGCTTGGTTATTCTACAG+TGG 0.674305 2:+53448006 MsG0280009514.01.T01:three_prime_UTR
ACATCGTTGGAGGTTGACGA+GGG 0.695647 2:-53449124 None:intergenic
AATGAATATGACACATCACA+TGG 0.696307 2:+53449093 MsG0280009514.01.T01:three_prime_UTR
ACCGGATGGCACTAAAGACG+AGG 0.712451 2:+53444440 MsG0280009514.01.T01:CDS
TCATGGAATAGGAACCAAGG+AGG 0.714609 2:+53447926 MsG0280009514.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTTTATTTTTTAAAAT+AGG + Chr2:53447627-53447646 MsG0280009514.01.T01:intron 0.0%
!! AAAAAAAAAAAAAAAAACTG+TGG + Chr2:53447013-53447032 MsG0280009514.01.T01:intron 10.0%
!! CAATTATTACAAATATATAA+AGG - Chr2:53445627-53445646 None:intergenic 10.0%
!! TATGTAAGTATATATATAAT+AGG + Chr2:53448751-53448770 MsG0280009514.01.T01:three_prime_UTR 10.0%
!!! GTTTTATTTCTTATTATTTT+GGG + Chr2:53443977-53443996 MsG0280009514.01.T01:intron 10.0%
!!! TGTTTTATTTCTTATTATTT+TGG + Chr2:53443976-53443995 MsG0280009514.01.T01:intron 10.0%
!! AATTAAATGAGCATTAAAAA+AGG + Chr2:53445263-53445282 MsG0280009514.01.T01:intron 15.0%
!! AATTAATTGAGTAAATAGAT+AGG + Chr2:53445313-53445332 MsG0280009514.01.T01:intron 15.0%
!! AATTGAAAAGAAATATTAGT+TGG - Chr2:53448315-53448334 None:intergenic 15.0%
!! AGAAATAAAACAGTAATTAT+TGG - Chr2:53443968-53443987 None:intergenic 15.0%
!! ATAGTTATCTTCTATAATTT+AGG + Chr2:53445682-53445701 MsG0280009514.01.T01:intron 15.0%
!! ATATGTATGATTATGATAAT+AGG - Chr2:53449280-53449299 None:intergenic 15.0%
!! ATTGAAAAGAAATATTAGTT+GGG - Chr2:53448314-53448333 None:intergenic 15.0%
!! TATATTGAAAGAAAAAGTAA+CGG + Chr2:53448466-53448485 MsG0280009514.01.T01:three_prime_UTR 15.0%
!! TGATGTAGATATTTAAATAT+GGG - Chr2:53449036-53449055 None:intergenic 15.0%
!! TTGATGTAGATATTTAAATA+TGG - Chr2:53449037-53449056 None:intergenic 15.0%
!! TTTATTTATGTCAAGTAATT+TGG + Chr2:53445145-53445164 MsG0280009514.01.T01:intron 15.0%
!! TTTCAACAAAAAACAAAAAT+GGG - Chr2:53442727-53442746 None:intergenic 15.0%
!!! AATTGTTGTTTTTTCTTTTT+AGG - Chr2:53448102-53448121 None:intergenic 15.0%
!!! ACAATTTATTTTAAAGTCTT+GGG + Chr2:53445041-53445060 MsG0280009514.01.T01:intron 15.0%
!!! AGAGTATTTTTATTACTTTT+TGG - Chr2:53449332-53449351 None:intergenic 15.0%
!!! ATGAATTTTTCTTTTTAGAT+AGG - Chr2:53448357-53448376 None:intergenic 15.0%
!!! ATGTAATTTTAATACAATCA+AGG - Chr2:53443346-53443365 None:intergenic 15.0%
!!! ATTGATGTAGATATTTTTTT+TGG - Chr2:53449076-53449095 None:intergenic 15.0%
!!! ATTGTTGTTTTTTCTTTTTA+GGG - Chr2:53448101-53448120 None:intergenic 15.0%
!!! ATTTCTTTTTTTAGTCATTT+TGG + Chr2:53443375-53443394 MsG0280009514.01.T01:intron 15.0%
!!! TACAATTTATTTTAAAGTCT+TGG + Chr2:53445040-53445059 MsG0280009514.01.T01:intron 15.0%
!!! TTAACTTTTTATGAAAGTTA+GGG + Chr2:53448935-53448954 MsG0280009514.01.T01:three_prime_UTR 15.0%
!!! TTGAAAGTTTTCATTTTTAA+TGG + Chr2:53442741-53442760 MsG0280009514.01.T01:intron 15.0%
!! AAAGTAATAAAAATACTCTC+TGG + Chr2:53449333-53449352 MsG0280009514.01.T01:three_prime_UTR 20.0%
!! AGCCTATATATATACTATAT+AGG - Chr2:53443065-53443084 None:intergenic 20.0%
!! AGTTTAGAAAAATATAGCAT+TGG + Chr2:53449230-53449249 MsG0280009514.01.T01:three_prime_UTR 20.0%
!! ATATAATAAATGCCAATTTC+AGG - Chr2:53446845-53446864 None:intergenic 20.0%
!! ATGGTGAACAAAATAAATAT+TGG - Chr2:53446313-53446332 None:intergenic 20.0%
!! CTATATATATACTATATAGG+AGG - Chr2:53443062-53443081 None:intergenic 20.0%
!! CTCCTATATAGTATATATAT+AGG + Chr2:53443060-53443079 MsG0280009514.01.T01:intron 20.0%
!! CTTTCAACAAAAAACAAAAA+TGG - Chr2:53442728-53442747 None:intergenic 20.0%
!! GTGTATTTAGTGAATAATAA+TGG + Chr2:53442944-53442963 MsG0280009514.01.T01:intron 20.0%
!! GTTCAACTTTCTTATAAAAT+TGG + Chr2:53444999-53445018 MsG0280009514.01.T01:intron 20.0%
!! TACAAGTAATGTATAAATAG+TGG + Chr2:53449372-53449391 MsG0280009514.01.T01:three_prime_UTR 20.0%
!! TATAATAAATGCCAATTTCA+GGG - Chr2:53446844-53446863 None:intergenic 20.0%
!! TCTATGCAAGTATTATTATT+CGG - Chr2:53443603-53443622 None:intergenic 20.0%
!! TGTTCCATAAAATATTCAAA+AGG - Chr2:53446341-53446360 None:intergenic 20.0%
!! TTAAAAAGTCAAAAAGTAGA+AGG - Chr2:53442688-53442707 None:intergenic 20.0%
!!! AAAAATTCATTGATTTAGAG+AGG + Chr2:53448367-53448386 MsG0280009514.01.T01:three_prime_UTR 20.0%
!!! AAAATGTTAACTAGTGTTTT+TGG + Chr2:53448888-53448907 MsG0280009514.01.T01:three_prime_UTR 20.0%
!!! AAATGTTAACTAGTGTTTTT+GGG + Chr2:53448889-53448908 MsG0280009514.01.T01:three_prime_UTR 20.0%
!!! ATTTATGCGTTTCTTTAAAA+AGG + Chr2:53442765-53442784 MsG0280009514.01.T01:intron 20.0%
!!! ATTTGTTTTAAGAAGTGTTT+GGG + Chr2:53443876-53443895 MsG0280009514.01.T01:intron 20.0%
!!! ATTTTAAAAAATGAAGAGCA+CGG + Chr2:53447119-53447138 MsG0280009514.01.T01:CDS 20.0%
!!! GGATTGAAATTTTAAATGTT+AGG - Chr2:53446806-53446825 None:intergenic 20.0%
!!! GTTAACTTTTTATGAAAGTT+AGG + Chr2:53448934-53448953 MsG0280009514.01.T01:three_prime_UTR 20.0%
!!! GTTATTTTAGACAGTATATA+AGG + Chr2:53445093-53445112 MsG0280009514.01.T01:intron 20.0%
!!! TATTTGTTTTAAGAAGTGTT+TGG + Chr2:53443875-53443894 MsG0280009514.01.T01:intron 20.0%
!!! TTGAAAGTTTAAGATGAAAA+AGG - Chr2:53446284-53446303 None:intergenic 20.0%
!!! TTTATGCGTTTCTTTAAAAA+GGG + Chr2:53442766-53442785 MsG0280009514.01.T01:intron 20.0%
! AAAGAAAAGTTATTGCATAC+CGG - Chr2:53444687-53444706 None:intergenic 25.0%
! AATGTGAACTTCATGAATTA+TGG - Chr2:53444551-53444570 None:intergenic 25.0%
! AGCTGATAGTATACATAAAT+AGG - Chr2:53444640-53444659 None:intergenic 25.0%
! AGGCTATATGAAATTTCATT+AGG - Chr2:53444773-53444792 None:intergenic 25.0%
! AGGTTGTTGAAATTGTTTAT+GGG + Chr2:53444400-53444419 MsG0280009514.01.T01:intron 25.0%
! ATATGAAAAATCATGCATGA+TGG - Chr2:53445652-53445671 None:intergenic 25.0%
! ATGAAAAATAGGTTAGGATT+AGG - Chr2:53447872-53447891 None:intergenic 25.0%
! ATGTGAACTTCATGAATTAT+GGG - Chr2:53444550-53444569 None:intergenic 25.0%
! ATTAAGAGAACATTACACTT+GGG - Chr2:53442656-53442675 None:intergenic 25.0%
! ATTACAAAATCAAAAGAGAG+TGG - Chr2:53443852-53443871 None:intergenic 25.0%
! ATTTATGTCAAGTAATTTGG+TGG + Chr2:53445148-53445167 MsG0280009514.01.T01:intron 25.0%
! CAAAGAATGAAAAATAGGTT+AGG - Chr2:53447878-53447897 None:intergenic 25.0%
! CAATTTGATCCATAAAGTTA+GGG + Chr2:53443528-53443547 MsG0280009514.01.T01:intron 25.0%
! CTATGCAAGTATTATTATTC+GGG - Chr2:53443602-53443621 None:intergenic 25.0%
! GTTGTATTAGTTGTTATGTT+GGG + Chr2:53447658-53447677 MsG0280009514.01.T01:intron 25.0%
! TATAACACATACAGTTTCAA+TGG + Chr2:53446491-53446510 MsG0280009514.01.T01:CDS 25.0%
! TCAATTTGATCCATAAAGTT+AGG + Chr2:53443527-53443546 MsG0280009514.01.T01:intron 25.0%
! TGTTGTATTAGTTGTTATGT+TGG + Chr2:53447657-53447676 MsG0280009514.01.T01:intron 25.0%
! TTGAAATGCTAAAAACATCA+AGG - Chr2:53448252-53448271 None:intergenic 25.0%
! TTGTATTAGTTGTTATGTTG+GGG + Chr2:53447659-53447678 MsG0280009514.01.T01:intron 25.0%
!! AAAAGTCGAAAAAGTATAGT+TGG + Chr2:53447235-53447254 MsG0280009514.01.T01:intron 25.0%
!! AAGCCTTGTAATATTGAAAA+TGG - Chr2:53447993-53448012 None:intergenic 25.0%
!! AGCCTTGTAATATTGAAAAT+GGG - Chr2:53447992-53448011 None:intergenic 25.0%
!! ATTATGCTTCTTTTTATCGT+TGG + Chr2:53446598-53446617 MsG0280009514.01.T01:CDS 25.0%
!! ATTTTCAATATTACAAGGCT+TGG + Chr2:53447992-53448011 MsG0280009514.01.T01:three_prime_UTR 25.0%
!! CTCACCTTTTGAATATTTTA+TGG + Chr2:53446334-53446353 MsG0280009514.01.T01:intron 25.0%
!! GTCAGTGTTTCATATTTTAT+GGG + Chr2:53446199-53446218 MsG0280009514.01.T01:intron 25.0%
!! TACATGGTAAATAGTCATTT+TGG + Chr2:53443289-53443308 MsG0280009514.01.T01:intron 25.0%
!! TATAGAAATGACTTTTCACA+TGG + Chr2:53446240-53446259 MsG0280009514.01.T01:intron 25.0%
!! TATATTTTTCTAAACTCAGC+AGG - Chr2:53449226-53449245 None:intergenic 25.0%
!! TGATTGAAAAAAGTTGACTT+GGG - Chr2:53442448-53442467 None:intergenic 25.0%
!! TGTCAGTGTTTCATATTTTA+TGG + Chr2:53446198-53446217 MsG0280009514.01.T01:intron 25.0%
!! TTATGCGTTTCTTTAAAAAG+GGG + Chr2:53442767-53442786 MsG0280009514.01.T01:intron 25.0%
!! TTCCCATTTTCAATATTACA+AGG + Chr2:53447987-53448006 MsG0280009514.01.T01:three_prime_UTR 25.0%
!! TTTAACTCTAAAGAAACACA+TGG - Chr2:53442862-53442881 None:intergenic 25.0%
!!! ACCTATTTTTCATTCTTTGT+AGG + Chr2:53447879-53447898 MsG0280009514.01.T01:intron 25.0%
!!! ACGTTACTTTCGATTTTTTT+AGG - Chr2:53448530-53448549 None:intergenic 25.0%
!!! TTCTTTAGAGTTAAATTGAG+TGG + Chr2:53442867-53442886 MsG0280009514.01.T01:intron 25.0%
!!! TTTAAGATGAAAAAGGTGTT+TGG - Chr2:53446277-53446296 None:intergenic 25.0%
!!! TTTCTTTAAAAAGGGGTATT+GGG + Chr2:53442774-53442793 MsG0280009514.01.T01:intron 25.0%
!!! TTTGTTTTAAGAAGTGTTTG+GGG + Chr2:53443877-53443896 MsG0280009514.01.T01:intron 25.0%
!!! TTTTAAAAAATGAAGAGCAC+GGG + Chr2:53447120-53447139 MsG0280009514.01.T01:CDS 25.0%
!!! TTTTATTTTATGTAGCCGAT+TGG + Chr2:53446901-53446920 MsG0280009514.01.T01:intron 25.0%
AAAAATGAATAGTGGTGCAT+TGG + Chr2:53444833-53444852 MsG0280009514.01.T01:intron 30.0%
AAAATATGAAACACTGACAC+TGG - Chr2:53446197-53446216 None:intergenic 30.0%
AAAGGAGTTGAAAGAGTTAA+AGG - Chr2:53447720-53447739 None:intergenic 30.0%
AAAGTTAGGGACTATAATGA+TGG + Chr2:53443541-53443560 MsG0280009514.01.T01:intron 30.0%
AAATATTCAAAAGGTGAGCA+TGG - Chr2:53446332-53446351 None:intergenic 30.0%
AAATCAAAAGAGAGTGGAAA+TGG - Chr2:53443846-53443865 None:intergenic 30.0%
AACAATTTCAACAACCTGAT+AGG - Chr2:53444397-53444416 None:intergenic 30.0%
AAGAGTAATATGAACTGACA+TGG + Chr2:53444004-53444023 MsG0280009514.01.T01:intron 30.0%
AATAAGATAGATCCCAAAGA+AGG - Chr2:53445535-53445554 None:intergenic 30.0%
AATCAAAAGAGAGTGGAAAT+GGG - Chr2:53443845-53443864 None:intergenic 30.0%
AATCAGCAATGAATTCAAAG+AGG - Chr2:53444132-53444151 None:intergenic 30.0%
AATGAATATGACACATCACA+TGG + Chr2:53449093-53449112 MsG0280009514.01.T01:three_prime_UTR 30.0%
AATGACTATTTACCATGTAC+CGG - Chr2:53443288-53443307 None:intergenic 30.0%
AATTCATGAAGTTCACATTG+CGG + Chr2:53444552-53444571 MsG0280009514.01.T01:intron 30.0%
ACATCTACTTAACTACTTAC+TGG + Chr2:53448045-53448064 MsG0280009514.01.T01:three_prime_UTR 30.0%
ACATCTTAATGAATCGATAC+CGG + Chr2:53445980-53445999 MsG0280009514.01.T01:CDS 30.0%
AGCATTAAAAAAGGATGAGA+GGG + Chr2:53445272-53445291 MsG0280009514.01.T01:intron 30.0%
ATAAGATAGATCCCAAAGAA+GGG - Chr2:53445534-53445553 None:intergenic 30.0%
ATCGATCTCAGATTGAAAAT+TGG - Chr2:53442527-53442546 None:intergenic 30.0%
ATGATTATGATAATAGGACG+AGG - Chr2:53449274-53449293 None:intergenic 30.0%
ATTCGATTCCGATTCATAAA+TGG + Chr2:53442550-53442569 MsG0280009514.01.T01:exon 30.0%
CAGGTTGTTGAAATTGTTTA+TGG + Chr2:53444399-53444418 MsG0280009514.01.T01:intron 30.0%
CATCATATTTGTCATGGAAT+AGG + Chr2:53447915-53447934 MsG0280009514.01.T01:CDS 30.0%
CATTATAGTCCCTAACTTTA+TGG - Chr2:53443540-53443559 None:intergenic 30.0%
CCTAGAAAATGAAGAGAATT+GGG - Chr2:53442494-53442513 None:intergenic 30.0%
CGTCAAATTTGTATTGTTGA+CGG - Chr2:53445859-53445878 None:intergenic 30.0%
CGTCAACAATACAAATTTGA+CGG + Chr2:53445857-53445876 MsG0280009514.01.T01:CDS 30.0%
CTACAACAAAATAGTAGATG+CGG + Chr2:53444871-53444890 MsG0280009514.01.T01:intron 30.0%
CTAGAAAATGAAGAGAATTG+GGG - Chr2:53442493-53442512 None:intergenic 30.0%
CTATTCCATGACAAATATGA+TGG - Chr2:53447917-53447936 None:intergenic 30.0%
GAAGTTATATGGAAAGATAG+AGG + Chr2:53446421-53446440 MsG0280009514.01.T01:CDS 30.0%
GATAGGTACAAGAAAGTAAA+AGG - Chr2:53444380-53444399 None:intergenic 30.0%
GATTAAGAGAACATTACACT+TGG - Chr2:53442657-53442676 None:intergenic 30.0%
GCATCAGAATTTAAATACAC+TGG + Chr2:53448145-53448164 MsG0280009514.01.T01:three_prime_UTR 30.0%
GCCTACAAAGAATGAAAAAT+AGG - Chr2:53447883-53447902 None:intergenic 30.0%
GTGATTGAAAAAAGTTGACT+TGG - Chr2:53442449-53442468 None:intergenic 30.0%
TAAACCAATCATTCAAACCA+TGG + Chr2:53449408-53449427 MsG0280009514.01.T01:three_prime_UTR 30.0%
TAAAGGGAGCTTATAAAGAA+AGG - Chr2:53446953-53446972 None:intergenic 30.0%
TAATTTCAGAATCAGCCAAT+CGG - Chr2:53446919-53446938 None:intergenic 30.0%
TACAGTTACAGATACATGTA+AGG + Chr2:53444345-53444364 MsG0280009514.01.T01:intron 30.0%
TAGAACTAAACTACTCAAAC+AGG - Chr2:53443630-53443649 None:intergenic 30.0%
TATACTTATCTCTCTTCACA+AGG + Chr2:53446053-53446072 MsG0280009514.01.T01:intron 30.0%
TGAACTGTGTTCTTATGAAA+AGG + Chr2:53444594-53444613 MsG0280009514.01.T01:intron 30.0%
TGATTATGATAATAGGACGA+GGG - Chr2:53449273-53449292 None:intergenic 30.0%
TGGCTTGACAAAATATACAA+TGG - Chr2:53446630-53446649 None:intergenic 30.0%
TTACCTTAAACACGATTTAG+AGG + Chr2:53449303-53449322 MsG0280009514.01.T01:three_prime_UTR 30.0%
TTTACTTTCTTGTACCTATC+AGG + Chr2:53444380-53444399 MsG0280009514.01.T01:intron 30.0%
TTTGCTCATCATTCTATTGT+GGG - Chr2:53447340-53447359 None:intergenic 30.0%
! AATGCACCACTATTCATTTT+TGG - Chr2:53444834-53444853 None:intergenic 30.0%
! ATATATATTTTCCTTCACCG+GGG + Chr2:53447682-53447701 MsG0280009514.01.T01:intron 30.0%
! CATATTTTACACATACACAC+TGG - Chr2:53448419-53448438 None:intergenic 30.0%
! CCAATTCTCTTCATTTTCTA+GGG + Chr2:53442492-53442511 MsG0280009514.01.T01:five_prime_UTR 30.0%
! GATATATATTTTCCTTCACC+GGG + Chr2:53447681-53447700 MsG0280009514.01.T01:intron 30.0%
! GGATATATATTTTCCTTCAC+CGG + Chr2:53447680-53447699 MsG0280009514.01.T01:intron 30.0%
! GGTATGCAATAACTTTTCTT+TGG + Chr2:53444686-53444705 MsG0280009514.01.T01:intron 30.0%
! GTTTCTTTAAAAAGGGGTAT+TGG + Chr2:53442773-53442792 MsG0280009514.01.T01:intron 30.0%
! TCAAATTGTTATTGATGCAG+TGG + Chr2:53444177-53444196 MsG0280009514.01.T01:intron 30.0%
! TGGTAACACTTGTGTATTTT+AGG + Chr2:53448065-53448084 MsG0280009514.01.T01:three_prime_UTR 30.0%
! TTCCAGAATGGTTCTATAAT+AGG + Chr2:53445951-53445970 MsG0280009514.01.T01:CDS 30.0%
! TTGTATATTTTGTCAAGCCA+AGG + Chr2:53446630-53446649 MsG0280009514.01.T01:CDS 30.0%
! TTTCAAGTGTTACATCTATG+AGG - Chr2:53446466-53446485 None:intergenic 30.0%
! TTTTGCTCATCATTCTATTG+TGG - Chr2:53447341-53447360 None:intergenic 30.0%
!! AGGTGAGTGTAAATTTTGAT+CGG - Chr2:53448601-53448620 None:intergenic 30.0%
!! ATGCACCACTATTCATTTTT+GGG - Chr2:53444833-53444852 None:intergenic 30.0%
!! CAAACTGTTCTGAGATTTAA+AGG - Chr2:53447738-53447757 None:intergenic 30.0%
!! TGAGTAGTTTAGTTCTATAC+CGG + Chr2:53443633-53443652 MsG0280009514.01.T01:intron 30.0%
!!! ATGATTGGTTTAGCATGTTT+TGG - Chr2:53449400-53449419 None:intergenic 30.0%
!!! ATTTTTTTAGGATCGCAGTT+TGG - Chr2:53448518-53448537 None:intergenic 30.0%
AAAGTACGTGTTTGGCATTT+CGG - Chr2:53443805-53443824 None:intergenic 35.0%
AAATTACCGTATTCTCGTAC+CGG - Chr2:53447103-53447122 None:intergenic 35.0%
AACTCCCTCAAAAAAACGTT+AGG - Chr2:53445430-53445449 None:intergenic 35.0%
AAGCCATATTTCACTAAGTG+GGG - Chr2:53443473-53443492 None:intergenic 35.0%
AATAGGTGATTTCATGTGCT+TGG - Chr2:53444623-53444642 None:intergenic 35.0%
AATCATTCAAACCATGGAGA+AGG + Chr2:53449414-53449433 MsG0280009514.01.T01:three_prime_UTR 35.0%
AATGAGCACATACTATCCAT+CGG - Chr2:53443943-53443962 None:intergenic 35.0%
AATTCTGTCCAAAGACAGTT+AGG - Chr2:53445239-53445258 None:intergenic 35.0%
AATTTCGTTCTCAAAGTCAC+AGG - Chr2:53448710-53448729 None:intergenic 35.0%
AATTTGACGGTGAACAAGAA+AGG + Chr2:53445870-53445889 MsG0280009514.01.T01:CDS 35.0%
ACACTGACACTTCAAAATGA+AGG + Chr2:53446103-53446122 MsG0280009514.01.T01:intron 35.0%
ACGTTGCATTATGGTACAAT+TGG - Chr2:53448636-53448655 None:intergenic 35.0%
ACTGGTATGTTATAATCTCG+TGG + Chr2:53448163-53448182 MsG0280009514.01.T01:three_prime_UTR 35.0%
AGCAACCCAAAAATGAATAG+TGG + Chr2:53444825-53444844 MsG0280009514.01.T01:intron 35.0%
AGTGGATGTTGTGAAACAAA+GGG + Chr2:53442885-53442904 MsG0280009514.01.T01:intron 35.0%
AGTGTTGTGTTCATTCCTAT+CGG + Chr2:53444258-53444277 MsG0280009514.01.T01:CDS 35.0%
AGTTGAAAGAGTTAAAGGAC+CGG - Chr2:53447715-53447734 None:intergenic 35.0%
ATCAAAAGAGAGTGGAAATG+GGG - Chr2:53443844-53443863 None:intergenic 35.0%
ATTTCGTTCTCAAAGTCACA+GGG - Chr2:53448709-53448728 None:intergenic 35.0%
CAAAAAAACGTTAGGTCTGT+GGG - Chr2:53445422-53445441 None:intergenic 35.0%
CAAGCCATATTTCACTAAGT+GGG - Chr2:53443474-53443493 None:intergenic 35.0%
CACAGGGAACATTGTATATT+AGG + Chr2:53446780-53446799 MsG0280009514.01.T01:intron 35.0%
CACCTATTATAGAACCATTC+TGG - Chr2:53445956-53445975 None:intergenic 35.0%
CATGGAAATGCAAAGAGAAA+TGG - Chr2:53445570-53445589 None:intergenic 35.0%
CCCTAGAAAATGAAGAGAAT+TGG - Chr2:53442495-53442514 None:intergenic 35.0%
CGTTAGCTAAAAACGATTTC+TGG + Chr2:53447781-53447800 MsG0280009514.01.T01:intron 35.0%
CTGAAGATACTGCAAATAAC+AGG + Chr2:53445775-53445794 MsG0280009514.01.T01:CDS 35.0%
GAATTTCCAGAAAGTAAAGC+AGG - Chr2:53449154-53449173 None:intergenic 35.0%
GAGATCCATCATATTTGTCA+TGG + Chr2:53447909-53447928 MsG0280009514.01.T01:CDS 35.0%
GAGATGATTGAGTATACACA+TGG - Chr2:53448216-53448235 None:intergenic 35.0%
GAGCATTAAAAAAGGATGAG+AGG + Chr2:53445271-53445290 MsG0280009514.01.T01:intron 35.0%
GCAAATACAAGATGAATGCA+TGG - Chr2:53445588-53445607 None:intergenic 35.0%
GCTAAAAACATCAAGGAAAG+AGG - Chr2:53448245-53448264 None:intergenic 35.0%
GTTATATGGAAAGATAGAGG+TGG + Chr2:53446424-53446443 MsG0280009514.01.T01:CDS 35.0%
TAAGATAGATCCCAAAGAAG+GGG - Chr2:53445533-53445552 None:intergenic 35.0%
TATACCGGGAATACTTGTAT+TGG + Chr2:53443648-53443667 MsG0280009514.01.T01:intron 35.0%
TCAAAAAAACGTTAGGTCTG+TGG - Chr2:53445423-53445442 None:intergenic 35.0%
TCTATTGTGGGTGAAAATTG+TGG - Chr2:53447328-53447347 None:intergenic 35.0%
TGCCAATTTCAGGGTTAAAA+CGG - Chr2:53446835-53446854 None:intergenic 35.0%
TTCAAAACAACCACTTCAAG+TGG - Chr2:53447834-53447853 None:intergenic 35.0%
TTCATCTCTACTGAGTTAGT+AGG - Chr2:53445350-53445369 None:intergenic 35.0%
TTCATTCTTTGTAGGCAACT+TGG + Chr2:53447887-53447906 MsG0280009514.01.T01:intron 35.0%
TTCTCCATGGTTTGAATGAT+TGG - Chr2:53449415-53449434 None:intergenic 35.0%
TTGCTGCATAAATTAGCACA+GGG + Chr2:53446764-53446783 MsG0280009514.01.T01:intron 35.0%
TTGGTTGTTTATTGACCAGA+TGG + Chr2:53443906-53443925 MsG0280009514.01.T01:intron 35.0%
TTTCCCAAAAACTTCCAGAA+TGG + Chr2:53445939-53445958 MsG0280009514.01.T01:CDS 35.0%
TTTGCTGCATAAATTAGCAC+AGG + Chr2:53446763-53446782 MsG0280009514.01.T01:intron 35.0%
! AAAATATGAAGTACCCGTAC+CGG - Chr2:53447372-53447391 None:intergenic 35.0%
! ATAGAGGTGGATTTGAATCA+AGG + Chr2:53446437-53446456 MsG0280009514.01.T01:CDS 35.0%
! ATTCGGGTAAATCACCATTT+TGG - Chr2:53443586-53443605 None:intergenic 35.0%
! CAGAATGGTTCTATAATAGG+TGG + Chr2:53445954-53445973 MsG0280009514.01.T01:CDS 35.0%
! CCCAATTCTCTTCATTTTCT+AGG + Chr2:53442491-53442510 MsG0280009514.01.T01:five_prime_UTR 35.0%
! CTGTTATTTGCAGTATCTTC+AGG - Chr2:53445777-53445796 None:intergenic 35.0%
! TGAATTTGCGCTGTTTCAAA+AGG - Chr2:53446698-53446717 None:intergenic 35.0%
! TTGAAGTGTCAGTGTTATAG+AGG - Chr2:53446098-53446117 None:intergenic 35.0%
! TTGCACGTTTTATCTGTTTC+AGG - Chr2:53444483-53444502 None:intergenic 35.0%
!! AGAACCATTCTGGAAGTTTT+TGG - Chr2:53445946-53445965 None:intergenic 35.0%
!! GAACCATTCTGGAAGTTTTT+GGG - Chr2:53445945-53445964 None:intergenic 35.0%
!! GAAGTTTTGACGTTGCATTA+TGG - Chr2:53448645-53448664 None:intergenic 35.0%
!! GAGTAGTTTAGTTCTATACC+GGG + Chr2:53443634-53443653 MsG0280009514.01.T01:intron 35.0%
!!! ACAGACCTAACGTTTTTTTG+AGG + Chr2:53445422-53445441 MsG0280009514.01.T01:intron 35.0%
!!! CAGACCTAACGTTTTTTTGA+GGG + Chr2:53445423-53445442 MsG0280009514.01.T01:intron 35.0%
AACAGGTCAATTGTACCTTG+TGG + Chr2:53445792-53445811 MsG0280009514.01.T01:CDS 40.0%
ACAATTGGTGTGAAAGACTC+AGG - Chr2:53448621-53448640 None:intergenic 40.0%
ACATGACTGCGTTTGAACAA+TGG + Chr2:53448865-53448884 MsG0280009514.01.T01:three_prime_UTR 40.0%
ACTCAGTAGAGATGAACACA+TGG + Chr2:53445354-53445373 MsG0280009514.01.T01:intron 40.0%
AGAATTAGAGGGGAGATGAA+AGG + Chr2:53445452-53445471 MsG0280009514.01.T01:intron 40.0%
AGGGAGTTGTAGAATTAGAG+GGG + Chr2:53445442-53445461 MsG0280009514.01.T01:intron 40.0%
AGGTCGTGTAGTTTGGATAT+GGG + Chr2:53443225-53443244 MsG0280009514.01.T01:intron 40.0%
AGGTCTATGTTGCATAGGTA+TGG + Chr2:53447051-53447070 MsG0280009514.01.T01:intron 40.0%
ATATGGGCCTTAAGATGCAT+AGG + Chr2:53443241-53443260 MsG0280009514.01.T01:intron 40.0%
ATGACTCCCTATGCATCTTA+AGG - Chr2:53443251-53443270 None:intergenic 40.0%
ATGTTCCTGTCAGAATTAGC+CGG + Chr2:53442968-53442987 MsG0280009514.01.T01:intron 40.0%
ATGTTGCATAGGTATGGGTA+CGG + Chr2:53447057-53447076 MsG0280009514.01.T01:intron 40.0%
ATTGCTTATCTCACTGTTGG+AGG + Chr2:53446575-53446594 MsG0280009514.01.T01:CDS 40.0%
CACATGTTTAGGGACCAAAA+TGG + Chr2:53443569-53443588 MsG0280009514.01.T01:intron 40.0%
CATATTTCACTAAGTGGGGT+CGG - Chr2:53443469-53443488 None:intergenic 40.0%
CCAAGCCATATTTCACTAAG+TGG - Chr2:53443475-53443494 None:intergenic 40.0%
CCACCTCTAAATCGTGTTTA+AGG - Chr2:53449309-53449328 None:intergenic 40.0%
CCACTTAGTGAAATATGGCT+TGG + Chr2:53443472-53443491 MsG0280009514.01.T01:intron 40.0%
CCTTAAACACGATTTAGAGG+TGG + Chr2:53449306-53449325 MsG0280009514.01.T01:three_prime_UTR 40.0%
CGCTACATAAAGTACGTGTT+TGG - Chr2:53443813-53443832 None:intergenic 40.0%
CGGCTATTGGATTCATACAA+CGG - Chr2:53447506-53447525 None:intergenic 40.0%
CTCATATGCCTAACTGTCTT+TGG + Chr2:53445228-53445247 MsG0280009514.01.T01:intron 40.0%
GACATCATGAAGCTACTTAC+CGG - Chr2:53446002-53446021 None:intergenic 40.0%
GAGGGAGTTGTAGAATTAGA+GGG + Chr2:53445441-53445460 MsG0280009514.01.T01:intron 40.0%
GAGTGGATGTTGTGAAACAA+AGG + Chr2:53442884-53442903 MsG0280009514.01.T01:intron 40.0%
GATGAGCAAAAATGCATACC+CGG + Chr2:53447350-53447369 MsG0280009514.01.T01:intron 40.0%
GCCAATTTCAGGGTTAAAAC+GGG - Chr2:53446834-53446853 None:intergenic 40.0%
GGAAGACGCCATTTATGAAT+CGG - Chr2:53442561-53442580 None:intergenic 40.0%
GGATCTATCTTATTCCTCTC+TGG + Chr2:53445541-53445560 MsG0280009514.01.T01:intron 40.0%
GGTCACTCACATGTCTAATT+CGG - Chr2:53448796-53448815 None:intergenic 40.0%
GGTCTATGTTGCATAGGTAT+GGG + Chr2:53447052-53447071 MsG0280009514.01.T01:intron 40.0%
GTCACCAATACAAGTATTCC+CGG - Chr2:53443655-53443674 None:intergenic 40.0%
GTTGAAAGAGTTAAAGGACC+GGG - Chr2:53447714-53447733 None:intergenic 40.0%
TAAAAAAGGATGAGAGGGAG+TGG + Chr2:53445277-53445296 MsG0280009514.01.T01:intron 40.0%
TAATTTAAGTGTCTCCCTGC+AGG + Chr2:53444212-53444231 MsG0280009514.01.T01:intron 40.0%
TACGAGCATGATCTCATTGT+TGG + Chr2:53449437-53449456 MsG0280009514.01.T01:three_prime_UTR 40.0%
TATGGAACAGTTGAATGAGC+AGG + Chr2:53446352-53446371 MsG0280009514.01.T01:intron 40.0%
TATGGGCCTTAAGATGCATA+GGG + Chr2:53443242-53443261 MsG0280009514.01.T01:intron 40.0%
TCGAAAGTAACGTTGTTTGC+AGG + Chr2:53448537-53448556 MsG0280009514.01.T01:three_prime_UTR 40.0%
TGAGGGAGTTGTAGAATTAG+AGG + Chr2:53445440-53445459 MsG0280009514.01.T01:intron 40.0%
TGAGTATACACATGGAGAGA+GGG - Chr2:53448208-53448227 None:intergenic 40.0%
TGTTCAAACGCAGTCATGTT+TGG - Chr2:53448864-53448883 None:intergenic 40.0%
TTAAGATGCATAGGGAGTCA+TGG + Chr2:53443250-53443269 MsG0280009514.01.T01:intron 40.0%
TTCGCTAATGGCTTCAAGAA+AGG + Chr2:53444287-53444306 MsG0280009514.01.T01:CDS 40.0%
TTGAGTATACACATGGAGAG+AGG - Chr2:53448209-53448228 None:intergenic 40.0%
TTGTCATGGAATAGGAACCA+AGG + Chr2:53447923-53447942 MsG0280009514.01.T01:CDS 40.0%
TTTGGTCCTTAATGTGTGAG+TGG + Chr2:53443307-53443326 MsG0280009514.01.T01:intron 40.0%
! AAATATGAAGTACCCGTACC+GGG - Chr2:53447371-53447390 None:intergenic 40.0%
! AAGGCTTGGTTATTCTACAG+TGG + Chr2:53448006-53448025 MsG0280009514.01.T01:three_prime_UTR 40.0%
! ACTATTTACCATGTACCGGT+TGG - Chr2:53443284-53443303 None:intergenic 40.0%
! ACTTTTACCAGAATCATCGC+CGG + Chr2:53444665-53444684 MsG0280009514.01.T01:CDS 40.0%
! AGTGATAGGGAGCACAAATT+TGG + Chr2:53445906-53445925 MsG0280009514.01.T01:CDS 40.0%
! ATTTGGTGGAGTTGAACAAG+TGG + Chr2:53445162-53445181 MsG0280009514.01.T01:intron 40.0%
! TTTTGGTCCCTAAACATGTG+AGG - Chr2:53443569-53443588 None:intergenic 40.0%
!! AAAAGTTGACTTGGGCAGTT+TGG - Chr2:53442440-53442459 None:intergenic 40.0%
!! ACCCGTTTTAACCCTGAAAT+TGG + Chr2:53446830-53446849 MsG0280009514.01.T01:intron 40.0%
!! AGAGAGGGAGTATTTGTTTC+AGG - Chr2:53448193-53448212 None:intergenic 40.0%
!! GGTCGTTTTGTGTTTCTTCT+TGG - Chr2:53442635-53442654 None:intergenic 40.0%
!! TTTTTGTTTACTGCCCTCCT+TGG - Chr2:53447943-53447962 None:intergenic 40.0%
!!! ATTTTTGGGTTGCTTGCTCT+GGG - Chr2:53444819-53444838 None:intergenic 40.0%
!!! TCACAGTGTGATGCTGATTT+TGG + Chr2:53443691-53443710 MsG0280009514.01.T01:intron 40.0%
AAAAGAGAGTGGAAATGGGG+TGG - Chr2:53443841-53443860 None:intergenic 45.0%
AAGAGAAATGGAGTCCAGAG+AGG - Chr2:53445558-53445577 None:intergenic 45.0%
AAGTAACGTTGTTTGCAGGC+TGG + Chr2:53448541-53448560 MsG0280009514.01.T01:three_prime_UTR 45.0%
AATGTACCAAAGGTCTGTGC+AGG + Chr2:53445195-53445214 MsG0280009514.01.T01:intron 45.0%
AGAATGCCGAAATAACCTGC+AGG - Chr2:53444230-53444249 None:intergenic 45.0%
AGCAGGAGGATCTTATTGTC+TGG + Chr2:53446369-53446388 MsG0280009514.01.T01:CDS 45.0%
AGGAGTGAGCATACTATGCT+CGG + Chr2:53443198-53443217 MsG0280009514.01.T01:intron 45.0%
AGTAACGGTGTTCATCAGCT+TGG + Chr2:53448481-53448500 MsG0280009514.01.T01:three_prime_UTR 45.0%
ATGTAAGACTTCCCAGATGG+TGG + Chr2:53444793-53444812 MsG0280009514.01.T01:intron 45.0%
ATTAGCGAAGCAACTCCGAT+AGG - Chr2:53444276-53444295 None:intergenic 45.0%
ATTATGGGACAGAGCTAGAC+TGG - Chr2:53444535-53444554 None:intergenic 45.0%
CAAAAATGCATACCCGGTAC+GGG + Chr2:53447356-53447375 MsG0280009514.01.T01:intron 45.0%
CAGACTGCAGACTCACTAAA+GGG - Chr2:53446969-53446988 None:intergenic 45.0%
CAGCAACCACTCACACATTA+AGG - Chr2:53443316-53443335 None:intergenic 45.0%
CAGGTCGTGTAGTTTGGATA+TGG + Chr2:53443224-53443243 MsG0280009514.01.T01:intron 45.0%
CAGTGAGATAAGCAATGCCA+AGG - Chr2:53446571-53446590 None:intergenic 45.0%
CATCTCCTGGAAGAGTGATA+GGG + Chr2:53445893-53445912 MsG0280009514.01.T01:CDS 45.0%
CATGGAATAGGAACCAAGGA+GGG + Chr2:53447927-53447946 MsG0280009514.01.T01:CDS 45.0%
CCATCTGGGAAGTCTTACAT+AGG - Chr2:53444793-53444812 None:intergenic 45.0%
CCTATGTAAGACTTCCCAGA+TGG + Chr2:53444790-53444809 MsG0280009514.01.T01:intron 45.0%
CGACCCCACTTAGTGAAATA+TGG + Chr2:53443467-53443486 MsG0280009514.01.T01:intron 45.0%
CGGTGAGTTCGACAAAATCA+CGG - Chr2:53443785-53443804 None:intergenic 45.0%
CTAATCAGGCCTAGACCTTT+CGG - Chr2:53443097-53443116 None:intergenic 45.0%
CTGTGAGGTCTATGTTGCAT+AGG + Chr2:53447046-53447065 MsG0280009514.01.T01:intron 45.0%
CTTACTGAGTTCTCTCCCTT+AGG - Chr2:53445744-53445763 None:intergenic 45.0%
CTTGGTTATTCTACAGTGGC+AGG + Chr2:53448010-53448029 MsG0280009514.01.T01:three_prime_UTR 45.0%
GAATGCCGAAATAACCTGCA+GGG - Chr2:53444229-53444248 None:intergenic 45.0%
GAGAATGCAAGTACGTACCT+TGG - Chr2:53446650-53446669 None:intergenic 45.0%
GAGCAATTGAGGAGTCCTAA+GGG + Chr2:53445726-53445745 MsG0280009514.01.T01:CDS 45.0%
GATGGTGCCTCACATGTTTA+GGG + Chr2:53443559-53443578 MsG0280009514.01.T01:intron 45.0%
GCAAAAATGCATACCCGGTA+CGG + Chr2:53447355-53447374 MsG0280009514.01.T01:intron 45.0%
GGCATTGCTTATCTCACTGT+TGG + Chr2:53446572-53446591 MsG0280009514.01.T01:CDS 45.0%
GGTGGGAAGAATGATTTCCT+TGG + Chr2:53446551-53446570 MsG0280009514.01.T01:CDS 45.0%
GTAAGAATAGGCTTGCAAGC+TGG - Chr2:53444083-53444102 None:intergenic 45.0%
GTATGAGTCAGACTGCTTAC+CGG + Chr2:53444422-53444441 MsG0280009514.01.T01:CDS 45.0%
GTATGGCCTGCTTTACTTTC+TGG + Chr2:53449145-53449164 MsG0280009514.01.T01:three_prime_UTR 45.0%
GTCACAGGGAGATGAAGAAA+TGG - Chr2:53448695-53448714 None:intergenic 45.0%
GTCATGGTCCAAAATCCAAC+CGG + Chr2:53443266-53443285 MsG0280009514.01.T01:intron 45.0%
GTCGAAGTGATGAGCAATTG+AGG + Chr2:53445715-53445734 MsG0280009514.01.T01:CDS 45.0%
TAAAGCAGGCCATACATCGT+TGG - Chr2:53449140-53449159 None:intergenic 45.0%
TACCTTGTGGTCTCATAGCT+TGG + Chr2:53445805-53445824 MsG0280009514.01.T01:CDS 45.0%
TACGGTACCCAGTACGATAT+GGG + Chr2:53447075-53447094 MsG0280009514.01.T01:CDS 45.0%
TAGAGGGGAGATGAAAGGAT+AGG + Chr2:53445457-53445476 MsG0280009514.01.T01:intron 45.0%
TAGATCCCAAAGAAGGGGAA+AGG - Chr2:53445528-53445547 None:intergenic 45.0%
TATCGGAGTTGCTTCGCTAA+TGG + Chr2:53444275-53444294 MsG0280009514.01.T01:CDS 45.0%
TCAGGGTTAAAACGGGTGAA+TGG - Chr2:53446827-53446846 None:intergenic 45.0%
TCATGGAATAGGAACCAAGG+AGG + Chr2:53447926-53447945 MsG0280009514.01.T01:CDS 45.0%
TCCAAAATCCAACCGGTACA+TGG + Chr2:53443273-53443292 MsG0280009514.01.T01:intron 45.0%
TCGTACTGTCTACTACTAGC+TGG + Chr2:53446525-53446544 MsG0280009514.01.T01:CDS 45.0%
TCTTCAACAGCCACTTGAAG+TGG + Chr2:53447821-53447840 MsG0280009514.01.T01:intron 45.0%
TCTTCTTGGAGCAGTGGAAT+CGG - Chr2:53442621-53442640 None:intergenic 45.0%
TGAGCAATTGAGGAGTCCTA+AGG + Chr2:53445725-53445744 MsG0280009514.01.T01:CDS 45.0%
TGTCTCCCTGCAGGTTATTT+CGG + Chr2:53444221-53444240 MsG0280009514.01.T01:intron 45.0%
TGTGTTTCTTCTTGGAGCAG+TGG - Chr2:53442627-53442646 None:intergenic 45.0%
TGTTCCTGTCAGAATTAGCC+GGG + Chr2:53442969-53442988 MsG0280009514.01.T01:intron 45.0%
! AACGCAGTCATGTTTGGTTC+AGG - Chr2:53448858-53448877 None:intergenic 45.0%
! GAAGTGTTTGGGGTGCATAT+TGG + Chr2:53443887-53443906 MsG0280009514.01.T01:intron 45.0%
! GATCAGTGTCATTGCTGACT+TGG - Chr2:53443143-53443162 None:intergenic 45.0%
! GGTATTGAGTAGTGCAGACT+AGG + Chr2:53449458-53449477 MsG0280009514.01.T01:three_prime_UTR 45.0%
! TAGGCTTGATTAGCTCCGAA+AGG + Chr2:53443079-53443098 MsG0280009514.01.T01:intron 45.0%
! TGATGGTGCCTCACATGTTT+AGG + Chr2:53443558-53443577 MsG0280009514.01.T01:intron 45.0%
! TGATTAGCTCCGAAAGGTCT+AGG + Chr2:53443085-53443104 MsG0280009514.01.T01:intron 45.0%
! TTTAGGATCGCAGTTTGGTC+TGG - Chr2:53448513-53448532 None:intergenic 45.0%
!! AACCTCACACTCTGAAGCAT+GGG - Chr2:53447403-53447422 None:intergenic 45.0%
!! GCAGTTTGGTGTAAAGTGGA+AGG - Chr2:53442426-53442445 None:intergenic 45.0%
!! TCTAGTAGTTTTACCGCTCG+AGG - Chr2:53444107-53444126 None:intergenic 45.0%
!! TGAACAAGAAAGGCATCTCC+TGG + Chr2:53445880-53445899 MsG0280009514.01.T01:CDS 45.0%
!! TTGGGCAGTTTGGTGTAAAG+TGG - Chr2:53442430-53442449 None:intergenic 45.0%
!!! ACCATGTACCGGTTGGATTT+TGG - Chr2:53443277-53443296 None:intergenic 45.0%
!!! CATTTTTGGGTTGCTTGCTC+TGG - Chr2:53444820-53444839 None:intergenic 45.0%
!! AAAAAAAAATTAAATTTACT+CGG - Chr2:53448817-53448836 None:intergenic 5.0%
!! AATTATTACAAATATATAAA+GGG - Chr2:53445626-53445645 None:intergenic 5.0%
!! ATAAAATTTAAATTATACAA+TGG - Chr2:53447599-53447618 None:intergenic 5.0%
!!! AATTTTATATTTATTGATTT+AGG + Chr2:53448331-53448350 MsG0280009514.01.T01:three_prime_UTR 5.0%
AACGTTAGGTCTGTGGGACT+TGG - Chr2:53445416-53445435 None:intergenic 50.0%
ACATCGTTGGAGGTTGACGA+GGG - Chr2:53449127-53449146 None:intergenic 50.0%
ACCCAGTACGATATGGGTAC+CGG + Chr2:53447081-53447100 MsG0280009514.01.T01:CDS 50.0%
ACCGCTCGAGGTGTAAGAAT+AGG - Chr2:53444095-53444114 None:intergenic 50.0%
ACCGGTACCCATATCGTACT+GGG - Chr2:53447085-53447104 None:intergenic 50.0%
ACCTCGTCTTTAGTGCCATC+CGG - Chr2:53444444-53444463 None:intergenic 50.0%
AGCATACTATGCTCGGATGC+AGG + Chr2:53443205-53443224 MsG0280009514.01.T01:intron 50.0%
AGGGGAGATGAAAGGATAGG+AGG + Chr2:53445460-53445479 MsG0280009514.01.T01:intron 50.0%
AGTTGAACAAGTGGCCTGGA+GGG + Chr2:53445171-53445190 MsG0280009514.01.T01:intron 50.0%
ATCAGAGCTGTGCATGACCA+GGG + Chr2:53443160-53443179 MsG0280009514.01.T01:intron 50.0%
ATCCCAAAGAAGGGGAAAGG+AGG - Chr2:53445525-53445544 None:intergenic 50.0%
ATTGGCAGTCAAGGCAAGAG+AGG + Chr2:53447538-53447557 MsG0280009514.01.T01:intron 50.0%
CACCTTACATACCATGCTCC+AGG - Chr2:53445380-53445399 None:intergenic 50.0%
CCTGGAGGGAAATGTACCAA+AGG + Chr2:53445185-53445204 MsG0280009514.01.T01:intron 50.0%
CCTTTGGTACATTTCCCTCC+AGG - Chr2:53445188-53445207 None:intergenic 50.0%
CGTCAACCTCCAACGATGTA+TGG + Chr2:53449128-53449147 MsG0280009514.01.T01:three_prime_UTR 50.0%
CTCCAAGCTATGAGACCACA+AGG - Chr2:53445810-53445829 None:intergenic 50.0%
CTGTCTACTACTAGCTGGCT+TGG + Chr2:53446530-53446549 MsG0280009514.01.T01:CDS 50.0%
GATGGAGAGTTGTATGCCGA+TGG + Chr2:53443924-53443943 MsG0280009514.01.T01:intron 50.0%
GCAGACTGCAGACTCACTAA+AGG - Chr2:53446970-53446989 None:intergenic 50.0%
GCATCTCCTGGAAGAGTGAT+AGG + Chr2:53445892-53445911 MsG0280009514.01.T01:CDS 50.0%
GCCTATTCTTACACCTCGAG+CGG + Chr2:53444091-53444110 MsG0280009514.01.T01:CDS 50.0%
GGAACAGTTGAATGAGCAGG+AGG + Chr2:53446355-53446374 MsG0280009514.01.T01:intron 50.0%
GTACGGTACCCAGTACGATA+TGG + Chr2:53447074-53447093 MsG0280009514.01.T01:CDS 50.0%
GTAGAGATGAACACATGGCC+TGG + Chr2:53445359-53445378 MsG0280009514.01.T01:intron 50.0%
GTTCCTGTCAGAATTAGCCG+GGG + Chr2:53442970-53442989 MsG0280009514.01.T01:intron 50.0%
TACATCGTTGGAGGTTGACG+AGG - Chr2:53449128-53449147 None:intergenic 50.0%
TACCCATGCTTCAGAGTGTG+AGG + Chr2:53447398-53447417 MsG0280009514.01.T01:intron 50.0%
TACCGGTACCCATATCGTAC+TGG - Chr2:53447086-53447105 None:intergenic 50.0%
TCATGCTCGTACCTTCTCCA+TGG - Chr2:53449428-53449447 None:intergenic 50.0%
TCCCAAAGAAGGGGAAAGGA+GGG - Chr2:53445524-53445543 None:intergenic 50.0%
TCCCTCCTTTCCCCTTCTTT+GGG + Chr2:53445520-53445539 MsG0280009514.01.T01:intron 50.0%
TCGGCATACAACTCTCCATC+TGG - Chr2:53443924-53443943 None:intergenic 50.0%
TGAATCCAATAGCCGACCTC+TGG + Chr2:53447511-53447530 MsG0280009514.01.T01:intron 50.0%
TGTGGCTTGAAGTTGCTGTG+AGG + Chr2:53447031-53447050 MsG0280009514.01.T01:intron 50.0%
TTCCTGTCAGAATTAGCCGG+GGG + Chr2:53442971-53442990 MsG0280009514.01.T01:intron 50.0%
TTGCATACCGGCGATGATTC+TGG - Chr2:53444675-53444694 None:intergenic 50.0%
! ACAGAGCTAGACTGGTGTCA+AGG - Chr2:53444527-53444546 None:intergenic 50.0%
! ACGTTGTTTGCAGGCTGGTT+TGG + Chr2:53448546-53448565 MsG0280009514.01.T01:three_prime_UTR 50.0%
! TCACGGCTCGGATACTAATC+AGG - Chr2:53443111-53443130 None:intergenic 50.0%
! TGACTTGGCCAGAGCAATCA+CGG - Chr2:53443128-53443147 None:intergenic 50.0%
!! CTACTACTAGCTGGCTTGGT+GGG + Chr2:53446534-53446553 MsG0280009514.01.T01:CDS 50.0%
!! GAACCTCACACTCTGAAGCA+TGG - Chr2:53447404-53447423 None:intergenic 50.0%
!! GGCTGAGAGCATTGATCTCT+CGG - Chr2:53447485-53447504 None:intergenic 50.0%
!! TCTACTACTAGCTGGCTTGG+TGG + Chr2:53446533-53446552 MsG0280009514.01.T01:CDS 50.0%
!! TGGGTACCGGTACGAGAATA+CGG + Chr2:53447094-53447113 MsG0280009514.01.T01:CDS 50.0%
AAAGGACCGGGTTCAAACCC+CGG - Chr2:53447702-53447721 None:intergenic 55.0%
AAGGTCTGTGCAGGAGCAGT+AGG + Chr2:53445204-53445223 MsG0280009514.01.T01:intron 55.0%
ACCGCTTCTCGAATGCAGAG+AGG + Chr2:53443006-53443025 MsG0280009514.01.T01:intron 55.0%
ACCGGATGGCACTAAAGACG+AGG + Chr2:53444440-53444459 MsG0280009514.01.T01:CDS 55.0%
ACTAAGTGGGGTCGGCTACA+TGG - Chr2:53443461-53443480 None:intergenic 55.0%
ACTGCTCCTGCACAGACCTT+TGG - Chr2:53445204-53445223 None:intergenic 55.0%
AGCAGGCCATACATCGTTGG+AGG - Chr2:53449137-53449156 None:intergenic 55.0%
CGGATGCAGGTCGTGTAGTT+TGG + Chr2:53443218-53443237 MsG0280009514.01.T01:intron 55.0%
CGGTTAAACCTACATGCCCC+CGG - Chr2:53442990-53443009 None:intergenic 55.0%
CTCCCTCCTTTCCCCTTCTT+TGG + Chr2:53445519-53445538 MsG0280009514.01.T01:intron 55.0%
CTGCATCTGTCTGCTGATGC+AGG - Chr2:53447462-53447481 None:intergenic 55.0%
GAGTCAGACTGCTTACCGGA+TGG + Chr2:53444426-53444445 MsG0280009514.01.T01:CDS 55.0%
GAGTTGAACAAGTGGCCTGG+AGG + Chr2:53445170-53445189 MsG0280009514.01.T01:intron 55.0%
GATCAGAGCTGTGCATGACC+AGG + Chr2:53443159-53443178 MsG0280009514.01.T01:intron 55.0%
GCCTCTCTGCATTCGAGAAG+CGG - Chr2:53443010-53443029 None:intergenic 55.0%
GCTTCTCGAATGCAGAGAGG+CGG + Chr2:53443009-53443028 MsG0280009514.01.T01:intron 55.0%
GGCCTGGAGCATGGTATGTA+AGG + Chr2:53445375-53445394 MsG0280009514.01.T01:intron 55.0%
GTGCTCCCTATCACTCTTCC+AGG - Chr2:53445901-53445920 None:intergenic 55.0%
GTGGAGTTGAACAAGTGGCC+TGG + Chr2:53445167-53445186 MsG0280009514.01.T01:intron 55.0%
TATCCGAGCCGTGATTGCTC+TGG + Chr2:53443117-53443136 MsG0280009514.01.T01:intron 55.0%
TCAGAGCTGTGCATGACCAG+GGG + Chr2:53443161-53443180 MsG0280009514.01.T01:intron 55.0%
TCGAATGCAGAGAGGCGGAT+GGG + Chr2:53443014-53443033 MsG0280009514.01.T01:intron 55.0%
TGAACACATGGCCTGGAGCA+TGG + Chr2:53445366-53445385 MsG0280009514.01.T01:intron 55.0%
TGCTCACTCCTGAGTCCTAG+CGG - Chr2:53443189-53443208 None:intergenic 55.0%
TTGACTGCCAATGCAGCCAG+AGG - Chr2:53447530-53447549 None:intergenic 55.0%
! AGAATTAGCCGGGGGCATGT+AGG + Chr2:53442979-53442998 MsG0280009514.01.T01:intron 55.0%
! TCTGGCTGCATTGGCAGTCA+AGG + Chr2:53447529-53447548 MsG0280009514.01.T01:intron 55.0%
AGAGAGGCGGATGGGGATTC+GGG + Chr2:53443022-53443041 MsG0280009514.01.T01:intron 60.0%
CAGAGAGGCGGATGGGGATT+CGG + Chr2:53443021-53443040 MsG0280009514.01.T01:intron 60.0%
CAGAGCTGTGCATGACCAGG+GGG + Chr2:53443162-53443181 MsG0280009514.01.T01:intron 60.0%
CCTTCACCGGGGTTTGAACC+CGG + Chr2:53447693-53447712 MsG0280009514.01.T01:intron 60.0%
CGAATGCAGAGAGGCGGATG+GGG + Chr2:53443015-53443034 MsG0280009514.01.T01:intron 60.0%
CTCGAATGCAGAGAGGCGGA+TGG + Chr2:53443013-53443032 MsG0280009514.01.T01:intron 60.0%
CTGCCAATGCAGCCAGAGGT+CGG - Chr2:53447526-53447545 None:intergenic 60.0%
GCAGTGGAATCGGCAGATCC+AGG - Chr2:53442611-53442630 None:intergenic 60.0%
GCTCACTCCTGAGTCCTAGC+GGG - Chr2:53443188-53443207 None:intergenic 60.0%
TAGCCGACCTCTGGCTGCAT+TGG + Chr2:53447520-53447539 MsG0280009514.01.T01:intron 60.0%
TGCAGCCAGAGGTCGGCTAT+TGG - Chr2:53447519-53447538 None:intergenic 60.0%
TGCCCCCGGCTAATTCTGAC+AGG - Chr2:53442976-53442995 None:intergenic 60.0%
TGGCCAGAGCAATCACGGCT+CGG - Chr2:53443123-53443142 None:intergenic 60.0%
! CTTGCTCTGGGCCACCATCT+GGG - Chr2:53444807-53444826 None:intergenic 60.0%
CCGGGTTCAAACCCCGGTGA+AGG - Chr2:53447696-53447715 None:intergenic 65.0%
GCAGCAGCAGCAGAAGCTCC+TGG + Chr2:53442590-53442609 MsG0280009514.01.T01:CDS 65.0%
! GCTTGCTCTGGGCCACCATC+TGG - Chr2:53444808-53444827 None:intergenic 65.0%
TGCTGCTGCTGCTGCTGCGC+TGG - Chr2:53442582-53442601 None:intergenic 70.0%
CAGGGGGCCCGCTAGGACTC+AGG + Chr2:53443178-53443197 MsG0280009514.01.T01:intron 75.0%
GCATGACCAGGGGGCCCGCT+AGG + Chr2:53443171-53443190 MsG0280009514.01.T01:intron 75.0%
! CTGAGTCCTAGCGGGCCCCC+TGG - Chr2:53443180-53443199 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr2 gene 53442419 53449477 53442419 ID=MsG0280009514.01;Name=MsG0280009514.01
Chr2 mRNA 53442419 53449477 53442419 ID=MsG0280009514.01.T01;Parent=MsG0280009514.01;Name=MsG0280009514.01.T01;_AED=0.47;_eAED=0.48;_QI=150|0.77|0.8|1|0.55|0.6|10|1484|376
Chr2 exon 53449078 53449477 53449078 ID=MsG0280009514.01.T01:exon:38239;Parent=MsG0280009514.01.T01
Chr2 exon 53447901 53449039 53447901 ID=MsG0280009514.01.T01:exon:38238;Parent=MsG0280009514.01.T01
Chr2 exon 53447068 53447141 53447068 ID=MsG0280009514.01.T01:exon:38237;Parent=MsG0280009514.01.T01
Chr2 exon 53446362 53446655 53446362 ID=MsG0280009514.01.T01:exon:38236;Parent=MsG0280009514.01.T01
Chr2 exon 53445704 53446001 53445704 ID=MsG0280009514.01.T01:exon:38235;Parent=MsG0280009514.01.T01
Chr2 exon 53444616 53444686 53444616 ID=MsG0280009514.01.T01:exon:38234;Parent=MsG0280009514.01.T01
Chr2 exon 53444402 53444515 53444402 ID=MsG0280009514.01.T01:exon:38233;Parent=MsG0280009514.01.T01
Chr2 exon 53444234 53444308 53444234 ID=MsG0280009514.01.T01:exon:38232;Parent=MsG0280009514.01.T01
Chr2 exon 53444054 53444112 53444054 ID=MsG0280009514.01.T01:exon:38231;Parent=MsG0280009514.01.T01
Chr2 exon 53442419 53442659 53442419 ID=MsG0280009514.01.T01:exon:38230;Parent=MsG0280009514.01.T01
Chr2 five_prime_UTR 53442419 53442568 53442419 ID=MsG0280009514.01.T01:five_prime_utr;Parent=MsG0280009514.01.T01
Chr2 CDS 53442569 53442659 53442569 ID=MsG0280009514.01.T01:cds;Parent=MsG0280009514.01.T01
Chr2 CDS 53444054 53444112 53444054 ID=MsG0280009514.01.T01:cds;Parent=MsG0280009514.01.T01
Chr2 CDS 53444234 53444308 53444234 ID=MsG0280009514.01.T01:cds;Parent=MsG0280009514.01.T01
Chr2 CDS 53444402 53444515 53444402 ID=MsG0280009514.01.T01:cds;Parent=MsG0280009514.01.T01
Chr2 CDS 53444616 53444686 53444616 ID=MsG0280009514.01.T01:cds;Parent=MsG0280009514.01.T01
Chr2 CDS 53445704 53446001 53445704 ID=MsG0280009514.01.T01:cds;Parent=MsG0280009514.01.T01
Chr2 CDS 53446362 53446655 53446362 ID=MsG0280009514.01.T01:cds;Parent=MsG0280009514.01.T01
Chr2 CDS 53447068 53447141 53447068 ID=MsG0280009514.01.T01:cds;Parent=MsG0280009514.01.T01
Chr2 CDS 53447901 53447955 53447901 ID=MsG0280009514.01.T01:cds;Parent=MsG0280009514.01.T01
Chr2 three_prime_UTR 53447956 53449039 53447956 ID=MsG0280009514.01.T01:three_prime_utr;Parent=MsG0280009514.01.T01
Chr2 three_prime_UTR 53449078 53449477 53449078 ID=MsG0280009514.01.T01:three_prime_utr;Parent=MsG0280009514.01.T01
Gene Sequence

>MsG0280009514.01.T01

ATGGCGTCTTCCAGCGCAGCAGCAGCAGCAGCAGAAGCTCCTGGATCTGCCGATTCCACTGCTCCAAGAAGAAACACAAAACGACCCAAGTATTCAAAGTTTACTCAGCAAGAACTTCCAGCTTGCAAGCCTATTCTTACACCTCGAGCGGTTATTTCGGCATTCTTGCTTGTCAGTGTTGTGTTCATTCCTATCGGAGTTGCTTCGCTAATGGCTTCAAGAAAGGTTGTTGAAATTGTTTATGGGTATGAGTCAGACTGCTTACCGGATGGCACTAAAGACGAGGTAGCATACATTCAGAGTCCTGAAACAGATAAAACGTGCAACATAACACTGAATGTGACCAAGCACATGAAATCACCTATTTATGTATACTATCAGCTTGACAACTTTTACCAGAATCATCGCCGGTATGTTAAAAGTCGAAGTGATGAGCAATTGAGGAGTCCTAAGGGAGAGAACTCAGTAAGTGCTTGTAAGCCTGAAGATACTGCAAATAACAGGTCAATTGTACCTTGTGGTCTCATAGCTTGGAGTTTATTCAATGACACATACAGCTTCTCCGTCAACAATACAAATTTGACGGTGAACAAGAAAGGCATCTCCTGGAAGAGTGATAGGGAGCACAAATTTGGAAAAGATGTTTTTCCCAAAAACTTCCAGAATGGTTCTATAATAGGTGGCGCACATCTTAATGAATCGATACCGTTGAATGAGCAGGAGGATCTTATTGTCTGGATGAGAACCGCTGCCTTACCAACTTTTAGGAAGTTATATGGAAAGATAGAGGTGGATTTGAATCAAGGTGACCTCATAGATGTAACACTTGAAAATAACTATAACACATACAGTTTCAATGGCAAGAAAAAGCTCGTACTGTCTACTACTAGCTGGCTTGGTGGGAAGAATGATTTCCTTGGCATTGCTTATCTCACTGTTGGAGGATTATGCTTCTTTTTATCGTTGGCTTTTACCATTGTATATTTTGTCAAGCCAAGGTACGTATGGGTACGGTACCCAGTACGATATGGGTACCGGTACGAGAATACGGTAATTTTAAAAAATGAAGAGCACGGGCAACTTGGAGATCCATCATATTTGTCATGGAATAGGAACCAAGGAGGGCAGTAA

Protein sequence

>MsG0280009514.01.T01

MASSSAAAAAAEAPGSADSTAPRRNTKRPKYSKFTQQELPACKPILTPRAVISAFLLVSVVFIPIGVASLMASRKVVEIVYGYESDCLPDGTKDEVAYIQSPETDKTCNITLNVTKHMKSPIYVYYQLDNFYQNHRRYVKSRSDEQLRSPKGENSVSACKPEDTANNRSIVPCGLIAWSLFNDTYSFSVNNTNLTVNKKGISWKSDREHKFGKDVFPKNFQNGSIIGGAHLNESIPLNEQEDLIVWMRTAALPTFRKLYGKIEVDLNQGDLIDVTLENNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGLCFFLSLAFTIVYFVKPRYVWVRYPVRYGYRYENTVILKNEEHGQLGDPSYLSWNRNQGGQ*