AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680031852.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031852.01.T01 MTR_6g045200 89.917 605 23 2 11 578 1 604 0.0 1089
MsG0680031852.01.T01 MTR_6g034030 83.089 615 54 5 11 577 1 613 0.0 1013
MsG0680031852.01.T01 MTR_0549s0020 89.885 524 16 1 74 560 1 524 0.0 954
MsG0680031852.01.T01 MTR_6g034030 80.544 478 43 5 11 440 1 476 0.0 754
MsG0680031852.01.T01 MTR_4g101880 46.125 542 271 6 40 575 30 556 4.23e-168 489
MsG0680031852.01.T01 MTR_0549s0010 73.077 208 18 2 74 244 1 207 2.46e-92 282
MsG0680031852.01.T01 MTR_4g049640 43.408 311 165 4 206 506 53 362 9.31e-67 221
MsG0680031852.01.T01 MTR_3g112530 41.411 326 178 6 206 521 51 373 4.03e-63 212
MsG0680031852.01.T01 MTR_4g132400 35.077 325 201 5 191 505 32 356 5.79e-56 193
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031852.01.T01 AT5G24030 53.016 630 180 12 27 562 14 621 0.0 617
MsG0680031852.01.T01 AT4G27970 59.188 468 168 5 118 565 41 505 0.0 557
MsG0680031852.01.T01 AT4G27970 59.188 468 168 5 118 565 41 505 0.0 557
MsG0680031852.01.T01 AT5G24030 52.427 515 133 10 27 450 14 507 1.65e-168 489
MsG0680031852.01.T01 AT4G27970 64.305 367 127 3 208 573 1 364 1.94e-165 476
MsG0680031852.01.T01 AT4G27970 64.305 367 127 3 208 573 1 364 1.94e-165 476
MsG0680031852.01.T01 AT1G12480 58.228 395 158 2 145 532 132 526 5.26e-161 471
MsG0680031852.01.T01 AT4G27970 62.682 343 109 2 118 441 41 383 1.50e-151 441
MsG0680031852.01.T01 AT4G27970 62.682 343 109 2 118 441 41 383 1.50e-151 441
MsG0680031852.01.T01 AT1G62280 39.542 306 176 6 206 503 46 350 7.37e-69 228
MsG0680031852.01.T01 AT1G62262 37.255 306 175 5 206 503 46 342 1.69e-61 207

Find 115 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTATTAGTGATGGAGTTTC+TGG 0.102710 6:-28206510 None:intergenic
CCATAAGATTAGGTTTATTT+TGG 0.111313 6:-28207752 None:intergenic
AGGAGTCTTACTTTGGAAAT+TGG 0.151569 6:-28206591 None:intergenic
GCAACCGAATATTCTTATTT+TGG 0.160615 6:-28209138 None:intergenic
AATGACTTAGTGACAATATT+TGG 0.219874 6:-28208838 None:intergenic
GACTTAAGAGTTTCTAATTC+TGG 0.231355 6:-28207574 None:intergenic
ATTGGTTGAGACTTGAATTT+TGG 0.251980 6:-28207296 None:intergenic
ACCAAGAATGTTTCCTTTAG+TGG 0.275047 6:+28207209 MsG0680031852.01.T01:CDS
TCCACTAAAGGAAACATTCT+TGG 0.287959 6:-28207210 None:intergenic
TGTCTCGAGCTTAAGATTTA+CGG 0.289775 6:+28207994 MsG0680031852.01.T01:CDS
ATGGCAATAGCAATGTCATT+AGG 0.310404 6:-28208952 None:intergenic
TGTTGGTAAGTAACTCCTTT+TGG 0.316133 6:-28207320 None:intergenic
AGCTCCTAGTGTTGCTTCAA+TGG 0.322868 6:+28208263 MsG0680031852.01.T01:CDS
TTAGCAGCCAAGCAATTCTT+TGG 0.324898 6:+28207683 MsG0680031852.01.T01:CDS
CCAAAATAAACCTAATCTTA+TGG 0.332000 6:+28207752 MsG0680031852.01.T01:CDS
TTTCAATCTCTTTGGAGTCT+TGG 0.340201 6:-28209029 None:intergenic
CTATTTGCCGACTTCAACAT+TGG 0.340435 6:-28204850 None:intergenic
GGGAGTTATGTGAAGGAATT+CGG 0.343526 6:-28207731 None:intergenic
GGAGTCTTACTTTGGAAATT+GGG 0.353731 6:-28206590 None:intergenic
CTAGTGTTGCTTCAATGGCT+TGG 0.355081 6:+28208268 MsG0680031852.01.T01:CDS
CAATGTTGAAGTCGGCAAAT+AGG 0.358900 6:+28204851 None:intergenic
ATCTCTATGGTACATTCTTA+TGG 0.359149 6:+28207960 MsG0680031852.01.T01:CDS
TCAAATCATTTATCAGTTGT+TGG 0.360276 6:+28208066 MsG0680031852.01.T01:CDS
CCAACAGCAAAGAAGAAAAT+TGG 0.369223 6:-28208138 None:intergenic
AACACTGGATGTAGCTCTTT+AGG 0.372096 6:-28208225 None:intergenic
TAGTGTTGCTTCAATGGCTT+GGG 0.373598 6:+28208269 MsG0680031852.01.T01:CDS
GAGAATATAGACAGCGAAAA+TGG 0.378577 6:-28207800 None:intergenic
CTTACTTTGGAAATTGGGCT+TGG 0.379734 6:-28206585 None:intergenic
CTCTTTAGGTAGTGTTGCAT+TGG 0.379987 6:-28208211 None:intergenic
AAAACCTACATCAATCTCTA+TGG 0.381498 6:+28207947 MsG0680031852.01.T01:CDS
CGGAGATGTACCATAAGATT+AGG 0.387385 6:-28207762 None:intergenic
ATAGGGCATTACCTGTTGAT+AGG 0.387872 6:+28207530 MsG0680031852.01.T01:CDS
ATTGTTCCTTTATTTCTCAT+TGG 0.389787 6:+28208344 MsG0680031852.01.T01:CDS
CGGTTCCCCGTTTCATCGTT+CGG 0.391099 6:+28207646 MsG0680031852.01.T01:CDS
TCAGTTGTTGGAAACTTTGT+TGG 0.392188 6:+28208078 MsG0680031852.01.T01:CDS
AACTTACCAATGAGAAATAA+AGG 0.395497 6:-28208350 None:intergenic
AACAATGGCCGTTTCTTCTC+CGG 0.397146 6:+28207626 MsG0680031852.01.T01:CDS
AATCTCAACATTCACGGTTA+TGG 0.397308 6:+28208879 MsG0680031852.01.T01:CDS
CTTTCTCCTTCTATCACTAA+TGG 0.397340 6:-28208971 None:intergenic
CACTGGTTAGGGTTCAGATA+TGG 0.404152 6:+28209003 MsG0680031852.01.T01:CDS
ACGCTACAAGAAGCTTTGAT+AGG 0.404558 6:+28207512 MsG0680031852.01.T01:CDS
AAGCCACATAAACACTGGTT+AGG 0.404899 6:+28208991 MsG0680031852.01.T01:CDS
CTATTGCCATTAGTGATAGA+AGG 0.408483 6:+28208965 MsG0680031852.01.T01:CDS
TGGCAATAGCAATGTCATTA+GGG 0.415303 6:-28208951 None:intergenic
CGGTGGTAGGCGATGTGGCT+AGG 0.417492 6:-28207711 None:intergenic
ATTCTGATCGGCATCGTTTG+AGG 0.421319 6:-28209112 None:intergenic
ATATGCTTCTACAGGCTGTC+AGG 0.429218 6:+28208609 MsG0680031852.01.T01:intron
CATATACCGAACGATGAAAC+GGG 0.430087 6:-28207652 None:intergenic
ATGGCTTGGGCTAAGATTCA+AGG 0.432952 6:+28208282 MsG0680031852.01.T01:CDS
GCAATTGCTGCACCAGTCAT+TGG 0.435263 6:-28208790 None:intergenic
GAACACTGATGATAGTAGTT+TGG 0.436563 6:+28209068 MsG0680031852.01.T01:CDS
TTAAGCTCGAGACATAATAT+TGG 0.444167 6:-28207985 None:intergenic
GCATCAAAATACCTATCAAC+AGG 0.446386 6:-28207541 None:intergenic
GCATATACCGAACGATGAAA+CGG 0.446798 6:-28207653 None:intergenic
TTAGGTAGTGTTGCATTGGT+TGG 0.448645 6:-28208207 None:intergenic
ACAACTGATAAATGATTTGA+AGG 0.451534 6:-28208063 None:intergenic
AACCCTAACCAGTGTTTATG+TGG 0.454199 6:-28208994 None:intergenic
GGCTCTAATCTCAACATTCA+CGG 0.461413 6:+28208873 MsG0680031852.01.T01:CDS
AACTTTGTTGGAGCGTTACT+TGG 0.463926 6:+28208090 MsG0680031852.01.T01:CDS
CGAACGATGAAACGGGGAAC+CGG 0.472041 6:-28207645 None:intergenic
CTACTTCGAAGCAGTTCGTC+GGG 0.477986 6:+28207834 MsG0680031852.01.T01:CDS
CGAAAGCCGCCTTTGTCCAC+CGG 0.482961 6:-28208028 None:intergenic
AGCGTTACTTGGTGCATCGA+TGG 0.486089 6:+28208101 MsG0680031852.01.T01:CDS
GATATATACTTTATTAGTGA+TGG 0.486944 6:-28206519 None:intergenic
GCATCGTTTGAGGACGGTTG+TGG 0.487768 6:-28209102 None:intergenic
ACCAGTCATTGGAAAAGTAT+AGG 0.490366 6:-28208779 None:intergenic
GAGTTTGAGAACCATCTTGT+TGG 0.490450 6:-28207337 None:intergenic
AAGAAGAAGTTAACACGGAT+TGG 0.491885 6:-28207868 None:intergenic
TAAGTCATTGTGTGTTGCAT+TGG 0.500305 6:+28208852 MsG0680031852.01.T01:CDS
CCATCTTGTGCATTTCCACT+CGG 0.503604 6:-28207484 None:intergenic
AGCTTAAGATTTACGGACAA+TGG 0.504721 6:+28208001 MsG0680031852.01.T01:CDS
GGTGGTAGGCGATGTGGCTA+GGG 0.515104 6:-28207710 None:intergenic
ACGGGGAACCGGAGAAGAAA+CGG 0.516364 6:-28207634 None:intergenic
GAACTGCTTCGAAGTAGAAA+AGG 0.521206 6:-28207828 None:intergenic
CAAGCCATTGAAGCAACACT+AGG 0.534868 6:-28208267 None:intergenic
ATTTACGGACAATGGATGTC+CGG 0.537992 6:+28208009 MsG0680031852.01.T01:CDS
TGTACCATAGAGATTGATGT+AGG 0.539740 6:-28207951 None:intergenic
CGCTACAAGAAGCTTTGATA+GGG 0.540378 6:+28207513 MsG0680031852.01.T01:CDS
TGAGTTTCTTTATAACAAAG+TGG 0.544697 6:-28207161 None:intergenic
GCGTTACTTGGTGCATCGAT+GGG 0.546328 6:+28208102 MsG0680031852.01.T01:CDS
AAGTCTCAACCAATGCCAAA+AGG 0.547948 6:+28207305 MsG0680031852.01.T01:CDS
GTCAGGATCAATTTCTTCAG+AGG 0.548320 6:+28208626 MsG0680031852.01.T01:CDS
GCATCGATGGGACTAATTGA+AGG 0.552203 6:+28208114 MsG0680031852.01.T01:CDS
GGAGTTACTTACCAACAAGA+TGG 0.552350 6:+28207326 MsG0680031852.01.T01:CDS
TGGACAAAGGCGGCTTTCGA+AGG 0.557619 6:+28208032 MsG0680031852.01.T01:CDS
TCATCGTTCGGTATATGCCT+CGG 0.559454 6:+28207658 MsG0680031852.01.T01:CDS
AGAAGTTAACACGGATTGGA+TGG 0.561531 6:-28207864 None:intergenic
AGCCACATAAACACTGGTTA+GGG 0.563075 6:+28208992 MsG0680031852.01.T01:CDS
TCTACTTCGAAGCAGTTCGT+CGG 0.581441 6:+28207833 MsG0680031852.01.T01:CDS
ACAAAGGCGGCTTTCGAAGG+TGG 0.582957 6:+28208035 MsG0680031852.01.T01:CDS
ATGTGAAGGAATTCGGTGGT+AGG 0.587839 6:-28207724 None:intergenic
ATGTAATCCAATGTTGAAGT+CGG 0.588493 6:+28204843 None:intergenic
ATTAGTGATGGAGTTTCTGG+AGG 0.593685 6:-28206507 None:intergenic
TGCTACCTCATGACAAACAA+TGG 0.595420 6:+28207611 MsG0680031852.01.T01:CDS
AATGGATGTCCGGTGGACAA+AGG 0.597830 6:+28208019 MsG0680031852.01.T01:CDS
TGATCGGCATCGTTTGAGGA+CGG 0.600030 6:-28209108 None:intergenic
GGCATGCTGACAGACATTGA+AGG 0.604528 6:-28207140 None:intergenic
AACGGCCATTGTTTGTCATG+AGG 0.606151 6:-28207616 None:intergenic
CAACTGATAAATGATTTGAA+GGG 0.610598 6:-28208062 None:intergenic
TTAACTTCTTCTTCGCACCG+TGG 0.611868 6:+28207878 MsG0680031852.01.T01:CDS
AGATGGTTCTCAAACTCGAA+AGG 0.612078 6:+28207343 MsG0680031852.01.T01:CDS
TCAGACATTGCAATTCCTGA+TGG 0.614715 6:-28207260 None:intergenic
CCGAGTGGAAATGCACAAGA+TGG 0.618656 6:+28207484 MsG0680031852.01.T01:CDS
GAATTCGGTGGTAGGCGATG+TGG 0.633433 6:-28207716 None:intergenic
GGAGAAAGCCACATAAACAC+TGG 0.639503 6:+28208986 MsG0680031852.01.T01:CDS
TACGGACAATGGATGTCCGG+TGG 0.646861 6:+28208012 MsG0680031852.01.T01:CDS
GGATGTCCGGTGGACAAAGG+CGG 0.650208 6:+28208022 MsG0680031852.01.T01:CDS
GCAACAAAGAGAAAGAACAC+TGG 0.662189 6:-28208240 None:intergenic
AGTTATGTGAAGGAATTCGG+TGG 0.705029 6:-28207728 None:intergenic
TTGCTTGGCTGCTAACTCCG+AGG 0.712685 6:-28207675 None:intergenic
GTGCGAAGAAGAAGTTAACA+CGG 0.725245 6:-28207873 None:intergenic
ATATACCGAACGATGAAACG+GGG 0.734350 6:-28207651 None:intergenic
AATCTTATGGTACATCTCCG+CGG 0.740138 6:+28207765 MsG0680031852.01.T01:CDS
AATGGTAGCTATAAGTACCG+CGG 0.745035 6:-28207782 None:intergenic
TCTACGTGGAAAGAACCGAG+TGG 0.760880 6:+28207469 MsG0680031852.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACATAAATTAACTTAAAAAT+AGG + Chr6:28206276-28206295 MsG0680031852.01.T01:intron 10.0%
!! ATTTGTATGATTTATTAATT+TGG - Chr6:28205059-28205078 None:intergenic 10.0%
!! CATAAATTAACTTAAAAATA+GGG + Chr6:28206277-28206296 MsG0680031852.01.T01:intron 10.0%
!!! GATATTAAATTTATTTTTTG+AGG + Chr6:28208451-28208470 MsG0680031852.01.T01:intron 10.0%
!!! TATTAAATTTATTTTTTGAG+GGG + Chr6:28208453-28208472 MsG0680031852.01.T01:intron 10.0%
!! ATTAAACAATATAACTAGAT+AGG - Chr6:28208678-28208697 None:intergenic 15.0%
!! ATTTCTTAATTAATGATGAT+GGG + Chr6:28204953-28204972 MsG0680031852.01.T01:intron 15.0%
!! TAACAAAAGATAAAATAAGT+TGG - Chr6:28206971-28206990 None:intergenic 15.0%
!! TATCAATATATCATTTCTTA+TGG - Chr6:28205007-28205026 None:intergenic 15.0%
!! TTAAACAATATAACTAGATA+GGG - Chr6:28208677-28208696 None:intergenic 15.0%
!!! AACAATTATGCATATTTTTT+TGG - Chr6:28208562-28208581 None:intergenic 15.0%
!!! ATAAATCATACAAATTTTTC+TGG + Chr6:28205064-28205083 MsG0680031852.01.T01:intron 15.0%
!!! ATTAAATTTATTTTTTGAGG+GGG + Chr6:28208454-28208473 MsG0680031852.01.T01:intron 15.0%
!!! TAATTAGTTTTAGTTTTTGT+TGG + Chr6:28205641-28205660 MsG0680031852.01.T01:intron 15.0%
!!! TATCTTTTGTTATAGAAATA+TGG + Chr6:28206801-28206820 MsG0680031852.01.T01:intron 15.0%
!!! TTTTTGTTTCTATATTTTTC+AGG + Chr6:28206433-28206452 MsG0680031852.01.T01:intron 15.0%
!! AAAATAAATTTAATATCGCG+TGG - Chr6:28208448-28208467 None:intergenic 20.0%
!! CATTTCTTAATTAATGATGA+TGG + Chr6:28204952-28204971 MsG0680031852.01.T01:intron 20.0%
!! GAAAAGTTGACATATTTATA+GGG - Chr6:28205932-28205951 None:intergenic 20.0%
!! GATATATACTTTATTAGTGA+TGG - Chr6:28206522-28206541 None:intergenic 20.0%
!! GCAATAAAAATGACTTAAAA+AGG - Chr6:28206614-28206633 None:intergenic 20.0%
!! GTTGTACATTATTGTTAAAT+AGG - Chr6:28205598-28205617 None:intergenic 20.0%
!! TAAACAATATAACTAGATAG+GGG - Chr6:28208676-28208695 None:intergenic 20.0%
!! TACATATGAGTTTACTTTAA+AGG - Chr6:28206027-28206046 None:intergenic 20.0%
!! TAGTGATTGAAAATTTCATA+TGG + Chr6:28206308-28206327 MsG0680031852.01.T01:intron 20.0%
!! TTGATTTCTTTAATTCAAAG+GGG + Chr6:28204911-28204930 MsG0680031852.01.T01:intron 20.0%
!!! AAAAACAAGAGTTTTCATAA+AGG - Chr6:28205793-28205812 None:intergenic 20.0%
!!! AAATTTTCAATCACTACTTT+TGG - Chr6:28206304-28206323 None:intergenic 20.0%
!!! AAGTTGAAGAAAAATTTTAG+AGG + Chr6:28206336-28206355 MsG0680031852.01.T01:intron 20.0%
!!! AATTATGCATATTTTTTTGG+TGG - Chr6:28208559-28208578 None:intergenic 20.0%
!!! AGTTGAAGAAAAATTTTAGA+GGG + Chr6:28206337-28206356 MsG0680031852.01.T01:intron 20.0%
!!! ATTATGCATATTTTTTTGGT+GGG - Chr6:28208558-28208577 None:intergenic 20.0%
!!! CAAAAGTTGGTATATTTATA+GGG + Chr6:28206368-28206387 MsG0680031852.01.T01:intron 20.0%
!!! CATAAGATTAGGTTTATTTT+GGG - Chr6:28207754-28207773 None:intergenic 20.0%
!!! GTTGATTTCTTTAATTCAAA+GGG + Chr6:28204910-28204929 MsG0680031852.01.T01:intron 20.0%
!!! TAAAAAATTTCTTCAGCTTT+TGG + Chr6:28205965-28205984 MsG0680031852.01.T01:intron 20.0%
!!! TGTTGATTTCTTTAATTCAA+AGG + Chr6:28204909-28204928 MsG0680031852.01.T01:intron 20.0%
!!! TTTGTTTGTAGTTTGTTATT+TGG + Chr6:28205532-28205551 MsG0680031852.01.T01:intron 20.0%
!!! TTTTTCCATGTTTTTTCAAT+AGG + Chr6:28207085-28207104 MsG0680031852.01.T01:intron 20.0%
! AAAAGTGAAGATGGAAAATT+TGG - Chr6:28205997-28206016 None:intergenic 25.0%
! AAATGCAATTCAACTATATC+TGG - Chr6:28205864-28205883 None:intergenic 25.0%
! AACTTACCAATGAGAAATAA+AGG - Chr6:28208353-28208372 None:intergenic 25.0%
! AATCGTAATTATAATCAACC+TGG + Chr6:28207368-28207387 MsG0680031852.01.T01:intron 25.0%
! AATGACTTAGTGACAATATT+TGG - Chr6:28208841-28208860 None:intergenic 25.0%
! AATTCTCATGAAGATATGAA+GGG - Chr6:28204979-28204998 None:intergenic 25.0%
! ACAACTGATAAATGATTTGA+AGG - Chr6:28208066-28208085 None:intergenic 25.0%
! ACATTATTGTTAAATAGGCT+TGG - Chr6:28205593-28205612 None:intergenic 25.0%
! ACTTTCCTATTGAAAAAACA+TGG - Chr6:28207093-28207112 None:intergenic 25.0%
! AGATATAGTTGAATTGCATT+TGG + Chr6:28205863-28205882 MsG0680031852.01.T01:intron 25.0%
! ATGTAATTCTTGTTGAAGTT+TGG + Chr6:28205502-28205521 MsG0680031852.01.T01:intron 25.0%
! ATTATGAGATCCTATAACTT+AGG + Chr6:28205837-28205856 MsG0680031852.01.T01:intron 25.0%
! CAACTGATAAATGATTTGAA+GGG - Chr6:28208065-28208084 None:intergenic 25.0%
! CCAAAATAAACCTAATCTTA+TGG + Chr6:28207752-28207771 MsG0680031852.01.T01:CDS 25.0%
! CGAAAAGTTGACATATTTAT+AGG - Chr6:28205933-28205952 None:intergenic 25.0%
! GAAATATGGTATGTTTCAAT+TGG + Chr6:28206815-28206834 MsG0680031852.01.T01:intron 25.0%
! TATATGTAAGCGCTTAATTA+AGG + Chr6:28207016-28207035 MsG0680031852.01.T01:intron 25.0%
! TATCATTGAAATTTACTCAC+TGG + Chr6:28208582-28208601 MsG0680031852.01.T01:intron 25.0%
! TCAAAATCAAAACAACAAAC+TGG - Chr6:28205170-28205189 None:intergenic 25.0%
! TCAAATCATTTATCAGTTGT+TGG + Chr6:28208066-28208085 MsG0680031852.01.T01:CDS 25.0%
! TCATTTAGTGTAAGTTTCAA+AGG - Chr6:28205816-28205835 None:intergenic 25.0%
! TGAGTTTCTTTATAACAAAG+TGG - Chr6:28207164-28207183 None:intergenic 25.0%
! TTGAGTTACAATAGAATCAA+GGG - Chr6:28206411-28206430 None:intergenic 25.0%
!! AATAACATTTTCTCCACTAA+AGG - Chr6:28207225-28207244 None:intergenic 25.0%
!! ACAACTGAAATTTCACATTT+TGG + Chr6:28205098-28205117 MsG0680031852.01.T01:intron 25.0%
!! ATTGTTCCTTTATTTCTCAT+TGG + Chr6:28208344-28208363 MsG0680031852.01.T01:CDS 25.0%
!! CAAGTAATTTTCAATCTCTT+TGG - Chr6:28209040-28209059 None:intergenic 25.0%
!! CCATAAGATTAGGTTTATTT+TGG - Chr6:28207755-28207774 None:intergenic 25.0%
!! CCTATAAATATACCAACTTT+TGG - Chr6:28206370-28206389 None:intergenic 25.0%
!! GATTCTTTGAATTGATTCTA+GGG + Chr6:28205889-28205908 MsG0680031852.01.T01:intron 25.0%
!! TCCTTTATATTTTCTCAGAA+AGG + Chr6:28205332-28205351 MsG0680031852.01.T01:intron 25.0%
!! TCCTTTCTGAGAAAATATAA+AGG - Chr6:28205336-28205355 None:intergenic 25.0%
!! TCTCTAAACATTTTTATTCC+AGG - Chr6:28207389-28207408 None:intergenic 25.0%
!! TGATTCTTTGAATTGATTCT+AGG + Chr6:28205888-28205907 MsG0680031852.01.T01:intron 25.0%
!!! AAGCTGAAGAAATTTTTTAG+AGG - Chr6:28205964-28205983 None:intergenic 25.0%
!!! AGCTGAAGAAATTTTTTAGA+GGG - Chr6:28205963-28205982 None:intergenic 25.0%
!!! ATTCAAGGTTCTTTTGATTA+TGG + Chr6:28208297-28208316 MsG0680031852.01.T01:CDS 25.0%
!!! CCAAAAGTTGGTATATTTAT+AGG + Chr6:28206367-28206386 MsG0680031852.01.T01:intron 25.0%
!!! GAGGAATTCTAAAATGATAT+AGG - Chr6:28206657-28206676 None:intergenic 25.0%
!!! TAGATTTTAGTTATGTCACA+AGG - Chr6:28207059-28207078 None:intergenic 25.0%
!!! TTATGCATATTTTTTTGGTG+GGG - Chr6:28208557-28208576 None:intergenic 25.0%
!!! TTATTTTGGCAAATTCTGAT+CGG - Chr6:28209127-28209146 None:intergenic 25.0%
!!! TTTCATAAGCTATTTTGAAG+AGG - Chr6:28206948-28206967 None:intergenic 25.0%
AAAACCTACATCAATCTCTA+TGG + Chr6:28207947-28207966 MsG0680031852.01.T01:CDS 30.0%
ATCTCTATGGTACATTCTTA+TGG + Chr6:28207960-28207979 MsG0680031852.01.T01:CDS 30.0%
ATGTGATTCTTGTTGAAGTT+TGG + Chr6:28205430-28205449 MsG0680031852.01.T01:intron 30.0%
CTTAAAAAGGAGTCTTACTT+TGG - Chr6:28206601-28206620 None:intergenic 30.0%
GAATTCTCATGAAGATATGA+AGG - Chr6:28204980-28204999 None:intergenic 30.0%
GACTTAAGAGTTTCTAATTC+TGG - Chr6:28207577-28207596 None:intergenic 30.0%
GAGACTGTTTGTATTACTTA+CGG + Chr6:28206694-28206713 MsG0680031852.01.T01:intron 30.0%
GTTGAGTTACAATAGAATCA+AGG - Chr6:28206412-28206431 None:intergenic 30.0%
TATATCTGGTCCTAAGTTAT+AGG - Chr6:28205850-28205869 None:intergenic 30.0%
TCCAAATCATGAACATAAAG+AGG - Chr6:28206676-28206695 None:intergenic 30.0%
TCCTCTTTATGTTCATGATT+TGG + Chr6:28206672-28206691 MsG0680031852.01.T01:intron 30.0%
TGAAGATGGAAAATTTGGTA+GGG - Chr6:28205992-28206011 None:intergenic 30.0%
TTAAGCTCGAGACATAATAT+TGG - Chr6:28207988-28208007 None:intergenic 30.0%
! ATCAAAGATGATTTTCCATC+AGG + Chr6:28207245-28207264 MsG0680031852.01.T01:CDS 30.0%
! ATTGGTTGAGACTTGAATTT+TGG - Chr6:28207299-28207318 None:intergenic 30.0%
! TAGAGATTGATGTAGGTTTT+TGG - Chr6:28207947-28207966 None:intergenic 30.0%
! TTTACAGATTTTCTCTTGCA+TGG + Chr6:28208752-28208771 MsG0680031852.01.T01:intron 30.0%
! TTTATTAGTGATGGAGTTTC+TGG - Chr6:28206513-28206532 None:intergenic 30.0%
!! GTTCTTTTGATTATGGATCA+AGG + Chr6:28208304-28208323 MsG0680031852.01.T01:CDS 30.0%
!!! AAGTCATTTTTTCTCCTTCT+GGG + Chr6:28205121-28205140 MsG0680031852.01.T01:intron 30.0%
!!! ACGAGACGATTTTAAAATAG+AGG - Chr6:28205201-28205220 None:intergenic 30.0%
!!! TGATAGGTATTTTGATGCAT+TGG + Chr6:28207546-28207565 MsG0680031852.01.T01:CDS 30.0%
!!! TTATTTTGGGAGTTATGTGA+AGG - Chr6:28207741-28207760 None:intergenic 30.0%
!!! TTGATGTAGGTTTTTGGTTA+CGG - Chr6:28207941-28207960 None:intergenic 30.0%
AAAAACAAGAGAGCTATCCA+CGG - Chr6:28207898-28207917 None:intergenic 35.0%
AAAAGCTAGCTCAAAGGATA+TGG - Chr6:28205560-28205579 None:intergenic 35.0%
AAAGCTAGCTCAAAGGATAT+GGG - Chr6:28205559-28205578 None:intergenic 35.0%
AAGAAGAAGTTAACACGGAT+TGG - Chr6:28207871-28207890 None:intergenic 35.0%
AAGCTATCCTCAAGCATTTA+TGG - Chr6:28206738-28206757 None:intergenic 35.0%
AATCTCAACATTCACGGTTA+TGG + Chr6:28208879-28208898 MsG0680031852.01.T01:CDS 35.0%
AATGCAATAGTTCATCGCAA+AGG - Chr6:28208523-28208542 None:intergenic 35.0%
ACCAAGAATGTTTCCTTTAG+TGG + Chr6:28207209-28207228 MsG0680031852.01.T01:CDS 35.0%
AGCTTAAGATTTACGGACAA+TGG + Chr6:28208001-28208020 MsG0680031852.01.T01:CDS 35.0%
ATGGCAATAGCAATGTCATT+AGG - Chr6:28208955-28208974 None:intergenic 35.0%
CCAACAGCAAAGAAGAAAAT+TGG - Chr6:28208141-28208160 None:intergenic 35.0%
CTATTGCCATTAGTGATAGA+AGG + Chr6:28208965-28208984 MsG0680031852.01.T01:CDS 35.0%
CTTTCTCCTTCTATCACTAA+TGG - Chr6:28208974-28208993 None:intergenic 35.0%
GAACACTGATGATAGTAGTT+TGG + Chr6:28209068-28209087 MsG0680031852.01.T01:CDS 35.0%
GAGAATATAGACAGCGAAAA+TGG - Chr6:28207803-28207822 None:intergenic 35.0%
GCATCAAAATACCTATCAAC+AGG - Chr6:28207544-28207563 None:intergenic 35.0%
GGATGAACTAAAAGTGAAGA+TGG - Chr6:28206006-28206025 None:intergenic 35.0%
GTGAAGATGGAAAATTTGGT+AGG - Chr6:28205993-28206012 None:intergenic 35.0%
TAAGTCATTGTGTGTTGCAT+TGG + Chr6:28208852-28208871 MsG0680031852.01.T01:CDS 35.0%
TCAGTTGTTGGAAACTTTGT+TGG + Chr6:28208078-28208097 MsG0680031852.01.T01:CDS 35.0%
TCCACTAAAGGAAACATTCT+TGG - Chr6:28207213-28207232 None:intergenic 35.0%
TGGCAATAGCAATGTCATTA+GGG - Chr6:28208954-28208973 None:intergenic 35.0%
TGTACCATAGAGATTGATGT+AGG - Chr6:28207954-28207973 None:intergenic 35.0%
TGTCTCGAGCTTAAGATTTA+CGG + Chr6:28207994-28208013 MsG0680031852.01.T01:CDS 35.0%
TTTAATATCGCGTGGACAAT+TGG - Chr6:28208440-28208459 None:intergenic 35.0%
! ACCAGTCATTGGAAAAGTAT+AGG - Chr6:28208782-28208801 None:intergenic 35.0%
! AGGAGTCTTACTTTGGAAAT+TGG - Chr6:28206594-28206613 None:intergenic 35.0%
! GATTTGACTCGTTCAAAACA+TGG + Chr6:28207414-28207433 MsG0680031852.01.T01:intron 35.0%
! GGAGTCTTACTTTGGAAATT+GGG - Chr6:28206593-28206612 None:intergenic 35.0%
! TAAGTAACTCCTTTTGGCAT+TGG - Chr6:28207317-28207336 None:intergenic 35.0%
!! AAACAAGAAAGTACTCACGT+AGG - Chr6:28205252-28205271 None:intergenic 35.0%
!! AGACAATTATCGATTCTACG+TGG + Chr6:28207455-28207474 MsG0680031852.01.T01:intron 35.0%
!! CCAATTTTCTTCTTTGCTGT+TGG + Chr6:28208138-28208157 MsG0680031852.01.T01:CDS 35.0%
!! TGTTGGTAAGTAACTCCTTT+TGG - Chr6:28207323-28207342 None:intergenic 35.0%
!! TTATGTCACAAGGTCTTGTT+TGG - Chr6:28207049-28207068 None:intergenic 35.0%
!! TTTCAATCTCTTTGGAGTCT+TGG - Chr6:28209032-28209051 None:intergenic 35.0%
!!! AGGTATTTTGATGCATTGGA+AGG + Chr6:28207550-28207569 MsG0680031852.01.T01:CDS 35.0%
!!! AGTCATTTTTTCTCCTTCTG+GGG + Chr6:28205122-28205141 MsG0680031852.01.T01:intron 35.0%
!!! ATATCCTTTGAGCTAGCTTT+TGG + Chr6:28205559-28205578 MsG0680031852.01.T01:intron 35.0%
!!! ATTTTTCAGGTTTAGCAGCA+TGG + Chr6:28206446-28206465 MsG0680031852.01.T01:intron 35.0%
!!! CTGGTTTTATATGCTTCTAC+AGG + Chr6:28208601-28208620 MsG0680031852.01.T01:intron 35.0%
!!! GAAGTCATTTTTTCTCCTTC+TGG + Chr6:28205120-28205139 MsG0680031852.01.T01:intron 35.0%
!!! GACTTGAATTTTGGTTGTCT+TGG - Chr6:28207290-28207309 None:intergenic 35.0%
!!! TATCCTTTGAGCTAGCTTTT+GGG + Chr6:28205560-28205579 MsG0680031852.01.T01:intron 35.0%
!!! TTGAATTTTGGTTGTCTTGG+AGG - Chr6:28207287-28207306 None:intergenic 35.0%
AACACTGGATGTAGCTCTTT+AGG - Chr6:28208228-28208247 None:intergenic 40.0%
AACCCTAACCAGTGTTTATG+TGG - Chr6:28208997-28209016 None:intergenic 40.0%
AAGTCTCAACCAATGCCAAA+AGG + Chr6:28207305-28207324 MsG0680031852.01.T01:CDS 40.0%
AATCTTATGGTACATCTCCG+CGG + Chr6:28207765-28207784 MsG0680031852.01.T01:CDS 40.0%
ACCTCTGCATAGAACTACTT+CGG + Chr6:28205684-28205703 MsG0680031852.01.T01:intron 40.0%
AGATGGTTCTCAAACTCGAA+AGG + Chr6:28207343-28207362 MsG0680031852.01.T01:CDS 40.0%
AGTTATGTGAAGGAATTCGG+TGG - Chr6:28207731-28207750 None:intergenic 40.0%
ATACTACCGGGCTATTCATT+CGG + Chr6:28205718-28205737 MsG0680031852.01.T01:intron 40.0%
ATATACCGAACGATGAAACG+GGG - Chr6:28207654-28207673 None:intergenic 40.0%
ATTTACGGACAATGGATGTC+CGG + Chr6:28208009-28208028 MsG0680031852.01.T01:CDS 40.0%
CAATAGCAAGCTATTGTGGT+GGG - Chr6:28208484-28208503 None:intergenic 40.0%
CATATACCGAACGATGAAAC+GGG - Chr6:28207655-28207674 None:intergenic 40.0%
CGGAGATGTACCATAAGATT+AGG - Chr6:28207765-28207784 None:intergenic 40.0%
CTCTTTAGGTAGTGTTGCAT+TGG - Chr6:28208214-28208233 None:intergenic 40.0%
GAACTGCTTCGAAGTAGAAA+AGG - Chr6:28207831-28207850 None:intergenic 40.0%
GACATGTCCATAAATGCTTG+AGG + Chr6:28206728-28206747 MsG0680031852.01.T01:intron 40.0%
GAGGGACTAAAACCAAAAGT+TGG + Chr6:28206355-28206374 MsG0680031852.01.T01:intron 40.0%
GAGTTTGAGAACCATCTTGT+TGG - Chr6:28207340-28207359 None:intergenic 40.0%
GCAACAAAGAGAAAGAACAC+TGG - Chr6:28208243-28208262 None:intergenic 40.0%
GCATATACCGAACGATGAAA+CGG - Chr6:28207656-28207675 None:intergenic 40.0%
GGAGTTACTTACCAACAAGA+TGG + Chr6:28207326-28207345 MsG0680031852.01.T01:CDS 40.0%
GGGAGTTATGTGAAGGAATT+CGG - Chr6:28207734-28207753 None:intergenic 40.0%
GTCAGGATCAATTTCTTCAG+AGG + Chr6:28208626-28208645 MsG0680031852.01.T01:CDS 40.0%
GTGCGAAGAAGAAGTTAACA+CGG - Chr6:28207876-28207895 None:intergenic 40.0%
TATCCCAAAAGCTAGCTCAA+AGG - Chr6:28205566-28205585 None:intergenic 40.0%
TCAGACATTGCAATTCCTGA+TGG - Chr6:28207263-28207282 None:intergenic 40.0%
TGCTACCTCATGACAAACAA+TGG + Chr6:28207611-28207630 MsG0680031852.01.T01:CDS 40.0%
TTAGCAGCCAAGCAATTCTT+TGG + Chr6:28207683-28207702 MsG0680031852.01.T01:CDS 40.0%
! AACTTTGTTGGAGCGTTACT+TGG + Chr6:28208090-28208109 MsG0680031852.01.T01:CDS 40.0%
! AAGCCACATAAACACTGGTT+AGG + Chr6:28208991-28209010 MsG0680031852.01.T01:CDS 40.0%
! AATGGTAGCTATAAGTACCG+CGG - Chr6:28207785-28207804 None:intergenic 40.0%
! ACAGATTTTCTCTTGCATGG+TGG + Chr6:28208755-28208774 MsG0680031852.01.T01:intron 40.0%
! ACGCTACAAGAAGCTTTGAT+AGG + Chr6:28207512-28207531 MsG0680031852.01.T01:CDS 40.0%
! AGCCACATAAACACTGGTTA+GGG + Chr6:28208992-28209011 MsG0680031852.01.T01:CDS 40.0%
! ATAGGGCATTACCTGTTGAT+AGG + Chr6:28207530-28207549 MsG0680031852.01.T01:CDS 40.0%
! ATTAGTGATGGAGTTTCTGG+AGG - Chr6:28206510-28206529 None:intergenic 40.0%
! CAGATTTTCTCTTGCATGGT+GGG + Chr6:28208756-28208775 MsG0680031852.01.T01:intron 40.0%
! CGCTACAAGAAGCTTTGATA+GGG + Chr6:28207513-28207532 MsG0680031852.01.T01:CDS 40.0%
! CTTACTTTGGAAATTGGGCT+TGG - Chr6:28206588-28206607 None:intergenic 40.0%
! GATGAACTATTGCATTGACC+TGG + Chr6:28208527-28208546 MsG0680031852.01.T01:intron 40.0%
! GCCTATACTTTTCCAATGAC+TGG + Chr6:28208778-28208797 MsG0680031852.01.T01:CDS 40.0%
! GGCTCTAATCTCAACATTCA+CGG + Chr6:28208873-28208892 MsG0680031852.01.T01:CDS 40.0%
! GGGTTTTCCAAAGAATTGCT+TGG - Chr6:28207693-28207712 None:intergenic 40.0%
! TTAGGTAGTGTTGCATTGGT+TGG - Chr6:28208210-28208229 None:intergenic 40.0%
!! AGAAGTTAACACGGATTGGA+TGG - Chr6:28207867-28207886 None:intergenic 40.0%
!! CACCACAATAGCTTGCTATT+GGG + Chr6:28208483-28208502 MsG0680031852.01.T01:intron 40.0%
!! TAGTGTTGCTTCAATGGCTT+GGG + Chr6:28208269-28208288 MsG0680031852.01.T01:CDS 40.0%
!!! GCTCTCTTGTTTTTAGCACT+AGG + Chr6:28207904-28207923 MsG0680031852.01.T01:CDS 40.0%
!!! TGTAGGTTTTTGGTTACGGA+TGG - Chr6:28207937-28207956 None:intergenic 40.0%
AACAATGGCCGTTTCTTCTC+CGG + Chr6:28207626-28207645 MsG0680031852.01.T01:CDS 45.0%
AACGGCCATTGTTTGTCATG+AGG - Chr6:28207619-28207638 None:intergenic 45.0%
AATAGCCCGGTAGTATGGAT+TGG - Chr6:28205714-28205733 None:intergenic 45.0%
AGCACTTGTGAGACTGTTTG+AGG + Chr6:28206864-28206883 MsG0680031852.01.T01:intron 45.0%
ATAGCCCGGTAGTATGGATT+GGG - Chr6:28205713-28205732 None:intergenic 45.0%
ATATGCTTCTACAGGCTGTC+AGG + Chr6:28208609-28208628 MsG0680031852.01.T01:intron 45.0%
ATTCTGATCGGCATCGTTTG+AGG - Chr6:28209115-28209134 None:intergenic 45.0%
CAAGCCATTGAAGCAACACT+AGG - Chr6:28208270-28208289 None:intergenic 45.0%
CCAATAGCAAGCTATTGTGG+TGG - Chr6:28208485-28208504 None:intergenic 45.0%
CCATCTTGTGCATTTCCACT+CGG - Chr6:28207487-28207506 None:intergenic 45.0%
GAATGAATAGCCCGGTAGTA+TGG - Chr6:28205719-28205738 None:intergenic 45.0%
GACCCAATAGCAAGCTATTG+TGG - Chr6:28208488-28208507 None:intergenic 45.0%
GACTCGTTCAAAACATGGTC+TGG + Chr6:28207419-28207438 MsG0680031852.01.T01:intron 45.0%
GGAGAAAGCCACATAAACAC+TGG + Chr6:28208986-28209005 MsG0680031852.01.T01:CDS 45.0%
GTCTCACAAGTGCTTATGTC+AGG - Chr6:28206858-28206877 None:intergenic 45.0%
TACTACCGGGCTATTCATTC+GGG + Chr6:28205719-28205738 MsG0680031852.01.T01:intron 45.0%
TCATCGTTCGGTATATGCCT+CGG + Chr6:28207658-28207677 MsG0680031852.01.T01:CDS 45.0%
TCGTTCAAAACATGGTCTGG+TGG + Chr6:28207422-28207441 MsG0680031852.01.T01:intron 45.0%
TCTACTTCGAAGCAGTTCGT+CGG + Chr6:28207833-28207852 MsG0680031852.01.T01:CDS 45.0%
TTAACTTCTTCTTCGCACCG+TGG + Chr6:28207878-28207897 MsG0680031852.01.T01:CDS 45.0%
TTCAAAACATGGTCTGGTGG+AGG + Chr6:28207425-28207444 MsG0680031852.01.T01:intron 45.0%
! AACTATTGCATTGACCTGGC+GGG + Chr6:28208531-28208550 MsG0680031852.01.T01:intron 45.0%
! ACCGAAGTAGTTCTATGCAG+AGG - Chr6:28205688-28205707 None:intergenic 45.0%
! ATGGCTTGGGCTAAGATTCA+AGG + Chr6:28208282-28208301 MsG0680031852.01.T01:CDS 45.0%
! ATGTGAAGGAATTCGGTGGT+AGG - Chr6:28207727-28207746 None:intergenic 45.0%
! CACTGGTTAGGGTTCAGATA+TGG + Chr6:28209003-28209022 MsG0680031852.01.T01:CDS 45.0%
! GAACTATTGCATTGACCTGG+CGG + Chr6:28208530-28208549 MsG0680031852.01.T01:intron 45.0%
! GCATCGATGGGACTAATTGA+AGG + Chr6:28208114-28208133 MsG0680031852.01.T01:CDS 45.0%
!! AGCTCCTAGTGTTGCTTCAA+TGG + Chr6:28208263-28208282 MsG0680031852.01.T01:CDS 45.0%
!! CCACCACAATAGCTTGCTAT+TGG + Chr6:28208482-28208501 MsG0680031852.01.T01:intron 45.0%
!! CTAGTGTTGCTTCAATGGCT+TGG + Chr6:28208268-28208287 MsG0680031852.01.T01:CDS 45.0%
!!! AGGTTTTTGGTTACGGATGG+AGG - Chr6:28207934-28207953 None:intergenic 45.0%
!!! AAAAAATTCTAATTTTTTTT+GGG + Chr6:28206202-28206221 MsG0680031852.01.T01:intron 5.0%
!!! AAAAAATTCTAATTTTTTTT+TGG - Chr6:28206221-28206202 None:intergenic 5.0%
!!! AAAAATTCTAATTTTTTTTT+GGG - Chr6:28206108-28206127 None:intergenic 5.0%
!!! ATATTAAATTTATTTTTTGA+GGG + Chr6:28208452-28208471 MsG0680031852.01.T01:intron 5.0%
!!! ATGAATTTTTATATTTTTTA+CGG + Chr6:28206148-28206167 MsG0680031852.01.T01:intron 5.0%
!!! TAAAAAATTCTAATTTTTTT+TGG + Chr6:28206201-28206220 MsG0680031852.01.T01:intron 5.0%
AATGGATGTCCGGTGGACAA+AGG + Chr6:28208019-28208038 MsG0680031852.01.T01:CDS 50.0%
ACTACCGGGCTATTCATTCG+GGG + Chr6:28205720-28205739 MsG0680031852.01.T01:intron 50.0%
CCGAGTGGAAATGCACAAGA+TGG + Chr6:28207484-28207503 MsG0680031852.01.T01:CDS 50.0%
CTACTTCGAAGCAGTTCGTC+GGG + Chr6:28207834-28207853 MsG0680031852.01.T01:CDS 50.0%
GCAATTGCTGCACCAGTCAT+TGG - Chr6:28208793-28208812 None:intergenic 50.0%
GGCATGCTGACAGACATTGA+AGG - Chr6:28207143-28207162 None:intergenic 50.0%
GGTGTCCCAATCCATACTAC+CGG + Chr6:28205705-28205724 MsG0680031852.01.T01:intron 50.0%
GTGTCCCAATCCATACTACC+GGG + Chr6:28205706-28205725 MsG0680031852.01.T01:intron 50.0%
TCTACGTGGAAAGAACCGAG+TGG + Chr6:28207469-28207488 MsG0680031852.01.T01:intron 50.0%
TGATCGGCATCGTTTGAGGA+CGG - Chr6:28209111-28209130 None:intergenic 50.0%
! TCTCCTTCTGGGGAGAGTAA+GGG + Chr6:28205132-28205151 MsG0680031852.01.T01:intron 50.0%
! TTCTCCTTCTGGGGAGAGTA+AGG + Chr6:28205131-28205150 MsG0680031852.01.T01:intron 50.0%
!! AGCGTTACTTGGTGCATCGA+TGG + Chr6:28208101-28208120 MsG0680031852.01.T01:CDS 50.0%
!! GCGTTACTTGGTGCATCGAT+GGG + Chr6:28208102-28208121 MsG0680031852.01.T01:CDS 50.0%
ACAAAGGCGGCTTTCGAAGG+TGG + Chr6:28208035-28208054 MsG0680031852.01.T01:CDS 55.0%
ACGGGGAACCGGAGAAGAAA+CGG - Chr6:28207637-28207656 None:intergenic 55.0%
CGAACGATGAAACGGGGAAC+CGG - Chr6:28207648-28207667 None:intergenic 55.0%
CGGTTCCCCGTTTCATCGTT+CGG + Chr6:28207646-28207665 MsG0680031852.01.T01:CDS 55.0%
GCATCGTTTGAGGACGGTTG+TGG - Chr6:28209105-28209124 None:intergenic 55.0%
GGCTATTCATTCGGGGACGA+TGG + Chr6:28205727-28205746 MsG0680031852.01.T01:intron 55.0%
TACGGACAATGGATGTCCGG+TGG + Chr6:28208012-28208031 MsG0680031852.01.T01:CDS 55.0%
TCGTCCCCGAATGAATAGCC+CGG - Chr6:28205727-28205746 None:intergenic 55.0%
TGGACAAAGGCGGCTTTCGA+AGG + Chr6:28208032-28208051 MsG0680031852.01.T01:CDS 55.0%
TTCCCCTTACTCTCCCCAGA+AGG - Chr6:28205138-28205157 None:intergenic 55.0%
TTGCTTGGCTGCTAACTCCG+AGG - Chr6:28207678-28207697 None:intergenic 55.0%
! CTCCTTCTGGGGAGAGTAAG+GGG + Chr6:28205133-28205152 MsG0680031852.01.T01:intron 55.0%
! GAATTCGGTGGTAGGCGATG+TGG - Chr6:28207719-28207738 None:intergenic 55.0%
CGAAAGCCGCCTTTGTCCAC+CGG - Chr6:28208031-28208050 None:intergenic 60.0%
GGATGTCCGGTGGACAAAGG+CGG + Chr6:28208022-28208041 MsG0680031852.01.T01:CDS 60.0%
GGTGGTAGGCGATGTGGCTA+GGG - Chr6:28207713-28207732 None:intergenic 60.0%
!!! TTTTTTTGGTGGGGCCCGCC+AGG - Chr6:28208548-28208567 None:intergenic 60.0%
CGGTGGTAGGCGATGTGGCT+AGG - Chr6:28207714-28207733 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr6 gene 28204853 28209146 28204853 ID=MsG0680031852.01;Name=MsG0680031852.01
Chr6 mRNA 28204853 28209146 28204853 ID=MsG0680031852.01.T01;Parent=MsG0680031852.01;Name=MsG0680031852.01.T01;_AED=0.35;_eAED=0.36;_QI=0|0|0|1|1|1|6|0|578
Chr6 exon 28204853 28204872 28204853 ID=MsG0680031852.01.T01:exon:8807;Parent=MsG0680031852.01.T01
Chr6 exon 28206455 28206602 28206455 ID=MsG0680031852.01.T01:exon:8808;Parent=MsG0680031852.01.T01
Chr6 exon 28207107 28207371 28207107 ID=MsG0680031852.01.T01:exon:8809;Parent=MsG0680031852.01.T01
Chr6 exon 28207482 28208365 28207482 ID=MsG0680031852.01.T01:exon:8810;Parent=MsG0680031852.01.T01
Chr6 exon 28208623 28208654 28208623 ID=MsG0680031852.01.T01:exon:8811;Parent=MsG0680031852.01.T01
Chr6 exon 28208759 28209146 28208759 ID=MsG0680031852.01.T01:exon:8812;Parent=MsG0680031852.01.T01
Chr6 CDS 28204853 28204872 28204853 ID=MsG0680031852.01.T01:cds;Parent=MsG0680031852.01.T01
Chr6 CDS 28206455 28206602 28206455 ID=MsG0680031852.01.T01:cds;Parent=MsG0680031852.01.T01
Chr6 CDS 28207107 28207371 28207107 ID=MsG0680031852.01.T01:cds;Parent=MsG0680031852.01.T01
Chr6 CDS 28207482 28208365 28207482 ID=MsG0680031852.01.T01:cds;Parent=MsG0680031852.01.T01
Chr6 CDS 28208623 28208654 28208623 ID=MsG0680031852.01.T01:cds;Parent=MsG0680031852.01.T01
Chr6 CDS 28208759 28209146 28208759 ID=MsG0680031852.01.T01:cds;Parent=MsG0680031852.01.T01
Gene Sequence

>MsG0680031852.01.T01

ATGTTGAAGTCGGCAAATAGGTTTAGCAGCATGGAAAATCACATAACTCTTGAAATCACAGAACAAGCTTCTCCTCCAGAAACTCCATCACTAATAAAGTATATATCATCAAATGAACTTGAAGATTTTGATTCATTTGAATCTCAGTTTCCAAGCCCAATTTCCAAAGAAAGTGAAGAAACATATAATCATCAAAGAAAACCTTCAATGTCTGTCAGCATGCCACTTTGTTATAAAGAAACTCAACTTCAATCACTAAACATCAACAATACCAAGAATGTTTCCTTTAGTGGAGAAAATGTTATTATCAAAGATGATTTTCCATCAGGAATTGCAATGTCTGAGCCTCCAAGACAACCAAAATTCAAGTCTCAACCAATGCCAAAAGGAGTTACTTACCAACAAGATGGTTCTCAAACTCGAAAGGCTAATCAACCGAGTGGAAATGCACAAGATGGTAACAACGCTACAAGAAGCTTTGATAGGGCATTACCTGTTGATAGGTATTTTGATGCATTGGAAGGTCCAGAATTAGAAACTCTTAAGTCATCAGAAGAGATAATGCTACCTCATGACAAACAATGGCCGTTTCTTCTCCGGTTCCCCGTTTCATCGTTCGGTATATGCCTCGGAGTTAGCAGCCAAGCAATTCTTTGGAAAACCCTAGCCACATCGCCTACCACCGAATTCCTTCACATAACTCCCAAAATAAACCTAATCTTATGGTACATCTCCGCGGTACTTATAGCTACCATTTTCGCTGTCTATATTCTCAAACTCCTTTTCTACTTCGAAGCAGTTCGTCGGGAATACTACCATCCAATCCGTGTTAACTTCTTCTTCGCACCGTGGATAGCTCTCTTGTTTTTAGCACTAGGAGTTCCTCCATCCGTAACCAAAAACCTACATCAATCTCTATGGTACATTCTTATGGCACCAATATTATGTCTCGAGCTTAAGATTTACGGACAATGGATGTCCGGTGGACAAAGGCGGCTTTCGAAGGTGGCGAACCCTTCAAATCATTTATCAGTTGTTGGAAACTTTGTTGGAGCGTTACTTGGTGCATCGATGGGACTAATTGAAGGACCAATTTTCTTCTTTGCTGTTGGACTTGCTCATTACACTGTGTTATTTGTGACACTTTATCAAAGACTTCCAACCAATGCAACACTACCTAAAGAGCTACATCCAGTGTTCTTTCTCTTTGTTGCAGCTCCTAGTGTTGCTTCAATGGCTTGGGCTAAGATTCAAGGTTCTTTTGATTATGGATCAAGGATTGCTTATTTCATTGCATTGTTCCTTTATTTCTCATTGGCTGTCAGGATCAATTTCTTCAGAGGATTTAAATTTTCTCTTGCATGGTGGGCCTATACTTTTCCAATGACTGGTGCAGCAATTGCAACAATAAGATACTCAAATCAAGTACCAAATATTGTCACTAAGTCATTGTGTGTTGCATTGGCTCTAATCTCAACATTCACGGTTATGGCACTTCTTCTATCAACAATATTGCATGCATTTGTCTTTAGAGATCTCTTCCCTAATGACATTGCTATTGCCATTAGTGATAGAAGGAGAAAGCCACATAAACACTGGTTAGGGTTCAGATATGGAAGCCAAGACTCCAAAGAGATTGAAAATTACTTGAAGTTTGTGAACACTGATGATAGTAGTTTGGATGATTCTACGCCACAACCGTCCTCAAACGATGCCGATCAGAATTTGCCAAAATAA
Protein sequence

>MsG0680031852.01.T01

MLKSANRFSSMENHITLEITEQASPPETPSLIKYISSNELEDFDSFESQFPSPISKESEETYNHQRKPSMSVSMPLCYKETQLQSLNINNTKNVSFSGENVIIKDDFPSGIAMSEPPRQPKFKSQPMPKGVTYQQDGSQTRKANQPSGNAQDGNNATRSFDRALPVDRYFDALEGPELETLKSSEEIMLPHDKQWPFLLRFPVSSFGICLGVSSQAILWKTLATSPTTEFLHITPKINLILWYISAVLIATIFAVYILKLLFYFEAVRREYYHPIRVNFFFAPWIALLFLALGVPPSVTKNLHQSLWYILMAPILCLELKIYGQWMSGGQRRLSKVANPSNHLSVVGNFVGALLGASMGLIEGPIFFFAVGLAHYTVLFVTLYQRLPTNATLPKELHPVFFLFVAAPSVASMAWAKIQGSFDYGSRIAYFIALFLYFSLAVRINFFRGFKFSLAWWAYTFPMTGAAIATIRYSNQVPNIVTKSLCVALALISTFTVMALLLSTILHAFVFRDLFPNDIAIAISDRRRKPHKHWLGFRYGSQDSKEIENYLKFVNTDDSSLDDSTPQPSSNDADQNLPK*