Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680033884.01.T01 | AGR40686.1 | 92.147 | 191 | 15 | 0 | 4 | 194 | 8 | 198 | 2.70E-116 | 338 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680033884.01.T01 | Q9SYS6 | 56.345 | 197 | 70 | 5 | 6 | 194 | 28 | 216 | 7.68E-68 | 209 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680033884.01.T01 | S5LVT8 | 92.147 | 191 | 15 | 0 | 4 | 194 | 8 | 198 | 1.29e-116 | 338 |
Gene ID | Type | Classification |
---|---|---|
MsG0680033884.01.T01 | TF | AP2/ERF-ERF |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180004714.01 | MsG0680033884.01 | 0.840407 | 8.859500e-58 | 1.260803e-54 |
MsG0180004792.01 | MsG0680033884.01 | 0.862432 | 5.091012e-64 | 1.490767e-60 |
MsG0180006028.01 | MsG0680033884.01 | 0.807723 | 4.398178e-50 | 2.467974e-47 |
MsG0680032416.01 | MsG0680033884.01 | 0.825101 | 5.631389e-54 | 5.084046e-51 |
MsG0680033852.01 | MsG0680033884.01 | 0.847283 | 1.275467e-59 | 2.255664e-56 |
MsG0680033879.01 | MsG0680033884.01 | 0.862163 | 6.155268e-64 | 1.785464e-60 |
MsG0680033884.01 | MsG0880043056.01 | 0.872215 | 3.773684e-67 | 1.566020e-63 |
MsG0680033884.01 | MsG0880047326.01 | 0.843188 | 1.633651e-58 | 2.535729e-55 |
MsG0480019812.01 | MsG0680033884.01 | 0.840263 | 9.660416e-58 | 1.368611e-54 |
MsG0480021753.01 | MsG0680033884.01 | -0.806176 | 9.341683e-50 | 5.036787e-47 |
MsG0480022154.01 | MsG0680033884.01 | 0.818304 | 2.102455e-52 | 1.567922e-49 |
MsG0480023987.01 | MsG0680033884.01 | -0.825611 | 4.265647e-54 | 3.907263e-51 |
MsG0580025565.01 | MsG0680033884.01 | 0.823260 | 1.524660e-53 | 1.306156e-50 |
MsG0580029751.01 | MsG0680033884.01 | 0.802700 | 4.953307e-49 | 2.442700e-46 |
MsG0280007406.01 | MsG0680033884.01 | 0.807676 | 4.499301e-50 | 2.521575e-47 |
MsG0280007923.01 | MsG0680033884.01 | -0.821410 | 4.097983e-53 | 3.331319e-50 |
MsG0280009675.01 | MsG0680033884.01 | 0.808850 | 2.528655e-50 | 1.461483e-47 |
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680033884.01.T01 | MTR_6g465530 | 91.099 | 191 | 17 | 0 | 4 | 194 | 8 | 198 | 8.88e-113 | 320 |
MsG0680033884.01.T01 | MTR_6g465510 | 86.567 | 201 | 17 | 2 | 4 | 194 | 8 | 208 | 2.77e-103 | 296 |
MsG0680033884.01.T01 | MTR_6g465420 | 76.471 | 187 | 37 | 3 | 4 | 188 | 29 | 210 | 1.04e-100 | 292 |
MsG0680033884.01.T01 | MTR_6g465460 | 77.660 | 188 | 32 | 4 | 4 | 188 | 29 | 209 | 2.06e-99 | 288 |
MsG0680033884.01.T01 | MTR_6g465450 | 79.255 | 188 | 31 | 3 | 4 | 188 | 29 | 211 | 6.89e-97 | 281 |
MsG0680033884.01.T01 | MTR_6g466000 | 70.500 | 200 | 46 | 4 | 4 | 194 | 32 | 227 | 5.84e-95 | 276 |
MsG0680033884.01.T01 | MTR_6g465430 | 76.064 | 188 | 36 | 4 | 4 | 188 | 29 | 210 | 7.71e-93 | 271 |
MsG0680033884.01.T01 | MTR_6g465690 | 71.134 | 194 | 42 | 3 | 4 | 189 | 38 | 225 | 3.28e-89 | 262 |
MsG0680033884.01.T01 | MTR_6g466130 | 72.396 | 192 | 48 | 2 | 4 | 194 | 41 | 228 | 3.06e-88 | 259 |
MsG0680033884.01.T01 | MTR_1g101600 | 62.105 | 190 | 62 | 2 | 7 | 194 | 19 | 200 | 2.91e-70 | 212 |
MsG0680033884.01.T01 | MTR_6g465850 | 51.852 | 243 | 66 | 4 | 3 | 194 | 37 | 279 | 6.39e-69 | 211 |
MsG0680033884.01.T01 | MTR_6g465990 | 59.000 | 200 | 49 | 5 | 4 | 194 | 18 | 193 | 2.29e-66 | 202 |
MsG0680033884.01.T01 | MTR_6g466020 | 57.219 | 187 | 53 | 3 | 6 | 191 | 20 | 180 | 7.57e-61 | 187 |
MsG0680033884.01.T01 | MTR_5g010930 | 46.635 | 208 | 81 | 5 | 7 | 194 | 27 | 224 | 1.60e-53 | 171 |
MsG0680033884.01.T01 | MTR_5g010940 | 48.500 | 200 | 87 | 5 | 7 | 194 | 32 | 227 | 2.05e-50 | 162 |
MsG0680033884.01.T01 | MTR_4g102660 | 51.500 | 200 | 82 | 6 | 7 | 194 | 22 | 218 | 1.41e-49 | 160 |
MsG0680033884.01.T01 | MTR_5g010910 | 48.718 | 195 | 84 | 5 | 12 | 194 | 32 | 222 | 1.44e-49 | 160 |
MsG0680033884.01.T01 | MTR_8g006410 | 68.750 | 80 | 25 | 0 | 24 | 103 | 47 | 126 | 1.39e-34 | 121 |
MsG0680033884.01.T01 | MTR_3g110205 | 55.238 | 105 | 46 | 1 | 24 | 128 | 38 | 141 | 7.52e-34 | 119 |
MsG0680033884.01.T01 | MTR_2g085015 | 39.894 | 188 | 92 | 6 | 23 | 192 | 41 | 225 | 9.99e-33 | 117 |
MsG0680033884.01.T01 | MTR_7g046260 | 58.511 | 94 | 32 | 1 | 17 | 103 | 42 | 135 | 1.53e-31 | 114 |
MsG0680033884.01.T01 | MTR_7g117690 | 59.091 | 88 | 36 | 0 | 16 | 103 | 15 | 102 | 1.36e-30 | 110 |
MsG0680033884.01.T01 | MTR_5g012910 | 62.025 | 79 | 30 | 0 | 25 | 103 | 24 | 102 | 1.46e-30 | 110 |
MsG0680033884.01.T01 | MTR_8g013860 | 63.291 | 79 | 29 | 0 | 25 | 103 | 43 | 121 | 1.22e-29 | 108 |
MsG0680033884.01.T01 | MTR_8g102800 | 56.566 | 99 | 43 | 0 | 19 | 117 | 27 | 125 | 1.93e-29 | 109 |
MsG0680033884.01.T01 | MTR_2g101340 | 50.926 | 108 | 47 | 2 | 2 | 103 | 8 | 115 | 5.66e-29 | 107 |
MsG0680033884.01.T01 | MTR_6g088405 | 62.821 | 78 | 29 | 0 | 26 | 103 | 41 | 118 | 5.80e-29 | 107 |
MsG0680033884.01.T01 | MTR_8g027465 | 56.383 | 94 | 38 | 1 | 13 | 103 | 23 | 116 | 2.67e-28 | 104 |
MsG0680033884.01.T01 | MTR_4g100650 | 61.538 | 78 | 30 | 0 | 26 | 103 | 71 | 148 | 1.05e-26 | 102 |
MsG0680033884.01.T01 | MTR_4g102670 | 58.228 | 79 | 32 | 1 | 25 | 103 | 11 | 88 | 4.97e-26 | 98.6 |
MsG0680033884.01.T01 | MTR_4g035430 | 56.627 | 83 | 36 | 0 | 28 | 110 | 31 | 113 | 1.25e-24 | 96.3 |
MsG0680033884.01.T01 | MTR_6g088425 | 61.628 | 86 | 33 | 0 | 25 | 110 | 45 | 130 | 6.21e-24 | 94.7 |
MsG0680033884.01.T01 | MTR_1g006660 | 58.696 | 92 | 34 | 1 | 16 | 103 | 30 | 121 | 5.91e-23 | 92.8 |
MsG0680033884.01.T01 | MTR_5g008550 | 46.535 | 101 | 52 | 1 | 29 | 127 | 21 | 121 | 5.14e-20 | 83.6 |
MsG0680033884.01.T01 | MTR_5g008590 | 54.945 | 91 | 41 | 0 | 29 | 119 | 11 | 101 | 3.57e-19 | 81.3 |
MsG0680033884.01.T01 | MTR_2g435590 | 52.000 | 75 | 33 | 1 | 13 | 87 | 83 | 154 | 8.15e-18 | 79.0 |
MsG0680033884.01.T01 | MTR_1g060910 | 35.838 | 173 | 70 | 7 | 13 | 169 | 3 | 150 | 8.83e-18 | 77.4 |
MsG0680033884.01.T01 | MTR_5g008470 | 46.429 | 84 | 45 | 0 | 31 | 114 | 77 | 160 | 9.32e-18 | 77.4 |
MsG0680033884.01.T01 | MTR_1g014780 | 56.667 | 60 | 26 | 0 | 28 | 87 | 37 | 96 | 1.70e-17 | 77.8 |
MsG0680033884.01.T01 | MTR_7g020980 | 45.679 | 81 | 44 | 0 | 25 | 105 | 47 | 127 | 2.07e-17 | 76.3 |
MsG0680033884.01.T01 | MTR_3g102100 | 40.164 | 122 | 65 | 4 | 14 | 133 | 31 | 146 | 2.16e-17 | 76.3 |
MsG0680033884.01.T01 | MTR_5g083340 | 62.069 | 58 | 22 | 0 | 29 | 86 | 85 | 142 | 2.41e-17 | 79.3 |
MsG0680033884.01.T01 | MTR_8g090350 | 46.237 | 93 | 45 | 2 | 13 | 100 | 95 | 187 | 3.70e-17 | 77.8 |
MsG0680033884.01.T01 | MTR_1g101550 | 42.958 | 142 | 74 | 4 | 29 | 165 | 57 | 196 | 4.61e-17 | 76.6 |
MsG0680033884.01.T01 | MTR_7g021010 | 47.126 | 87 | 45 | 1 | 22 | 107 | 4 | 90 | 1.22e-16 | 73.2 |
MsG0680033884.01.T01 | MTR_1g019110 | 37.374 | 99 | 59 | 1 | 29 | 127 | 44 | 139 | 1.30e-16 | 74.3 |
MsG0680033884.01.T01 | MTR_2g105380 | 51.471 | 68 | 33 | 0 | 17 | 84 | 105 | 172 | 1.47e-16 | 77.0 |
MsG0680033884.01.T01 | MTR_3g074130 | 59.322 | 59 | 24 | 0 | 28 | 86 | 149 | 207 | 2.28e-16 | 76.3 |
MsG0680033884.01.T01 | MTR_7g021010 | 45.783 | 83 | 45 | 0 | 25 | 107 | 47 | 129 | 2.57e-16 | 73.6 |
MsG0680033884.01.T01 | MTR_3g105510 | 44.706 | 85 | 47 | 0 | 29 | 113 | 37 | 121 | 2.59e-16 | 74.7 |
MsG0680033884.01.T01 | MTR_1g090170 | 55.556 | 63 | 28 | 0 | 24 | 86 | 147 | 209 | 2.74e-16 | 75.9 |
MsG0680033884.01.T01 | MTR_2g043030 | 30.814 | 172 | 109 | 4 | 28 | 194 | 18 | 184 | 2.97e-16 | 73.9 |
MsG0680033884.01.T01 | MTR_1g014860 | 50.000 | 66 | 33 | 0 | 22 | 87 | 15 | 80 | 3.52e-16 | 73.9 |
MsG0680033884.01.T01 | MTR_5g062700 | 59.322 | 59 | 24 | 0 | 28 | 86 | 172 | 230 | 3.52e-16 | 75.9 |
MsG0680033884.01.T01 | MTR_1g087920 | 50.000 | 68 | 34 | 0 | 19 | 86 | 67 | 134 | 3.64e-16 | 75.1 |
MsG0680033884.01.T01 | MTR_1g014820 | 43.478 | 92 | 48 | 1 | 28 | 115 | 26 | 117 | 3.84e-16 | 74.7 |
MsG0680033884.01.T01 | MTR_1g090170 | 55.556 | 63 | 28 | 0 | 24 | 86 | 234 | 296 | 5.20e-16 | 75.5 |
MsG0680033884.01.T01 | MTR_5g083330 | 52.055 | 73 | 35 | 0 | 14 | 86 | 20 | 92 | 5.29e-16 | 74.7 |
MsG0680033884.01.T01 | MTR_2g089170 | 49.367 | 79 | 39 | 1 | 29 | 106 | 65 | 143 | 6.55e-16 | 72.8 |
MsG0680033884.01.T01 | MTR_2g043050 | 44.706 | 85 | 47 | 0 | 28 | 112 | 18 | 102 | 6.67e-16 | 73.2 |
MsG0680033884.01.T01 | MTR_8g092460 | 56.667 | 60 | 26 | 0 | 29 | 88 | 145 | 204 | 7.85e-16 | 74.3 |
MsG0680033884.01.T01 | MTR_2g090235 | 59.322 | 59 | 24 | 0 | 28 | 86 | 217 | 275 | 8.32e-16 | 75.1 |
MsG0680033884.01.T01 | MTR_5g016750 | 38.835 | 103 | 56 | 1 | 29 | 131 | 25 | 120 | 9.93e-16 | 72.0 |
MsG0680033884.01.T01 | MTR_4g086220 | 60.714 | 56 | 22 | 0 | 29 | 84 | 96 | 151 | 1.16e-15 | 72.8 |
MsG0680033884.01.T01 | MTR_3g053690 | 59.375 | 64 | 23 | 1 | 21 | 84 | 22 | 82 | 1.24e-15 | 72.8 |
MsG0680033884.01.T01 | MTR_1g014800 | 53.333 | 60 | 28 | 0 | 28 | 87 | 30 | 89 | 1.54e-15 | 72.4 |
MsG0680033884.01.T01 | MTR_1g028560 | 57.895 | 57 | 24 | 0 | 29 | 85 | 115 | 171 | 1.82e-15 | 73.6 |
MsG0680033884.01.T01 | MTR_4g078710 | 36.134 | 119 | 68 | 2 | 13 | 131 | 14 | 124 | 1.84e-15 | 72.0 |
MsG0680033884.01.T01 | MTR_2g078680 | 60.714 | 56 | 22 | 0 | 29 | 84 | 31 | 86 | 1.89e-15 | 71.6 |
MsG0680033884.01.T01 | MTR_5g082950 | 62.500 | 56 | 21 | 0 | 29 | 84 | 66 | 121 | 2.60e-15 | 73.2 |
MsG0680033884.01.T01 | MTR_4g086160 | 58.929 | 56 | 23 | 0 | 29 | 84 | 96 | 151 | 4.15e-15 | 71.2 |
MsG0680033884.01.T01 | MTR_4g086190 | 58.929 | 56 | 23 | 0 | 29 | 84 | 96 | 151 | 4.37e-15 | 71.2 |
MsG0680033884.01.T01 | MTR_4g086165 | 58.929 | 56 | 23 | 0 | 29 | 84 | 82 | 137 | 5.39e-15 | 70.5 |
MsG0680033884.01.T01 | MTR_3g105480 | 44.578 | 83 | 46 | 0 | 31 | 113 | 33 | 115 | 5.45e-15 | 70.9 |
MsG0680033884.01.T01 | MTR_1g074310 | 54.839 | 62 | 27 | 1 | 29 | 89 | 21 | 82 | 5.54e-15 | 68.9 |
MsG0680033884.01.T01 | MTR_8g022820 | 51.515 | 66 | 32 | 0 | 19 | 84 | 114 | 179 | 5.72e-15 | 72.4 |
MsG0680033884.01.T01 | MTR_8g022820 | 51.515 | 66 | 32 | 0 | 19 | 84 | 114 | 179 | 5.72e-15 | 72.4 |
MsG0680033884.01.T01 | MTR_8g022820 | 51.515 | 66 | 32 | 0 | 19 | 84 | 113 | 178 | 5.75e-15 | 72.4 |
MsG0680033884.01.T01 | MTR_0939s0010 | 58.929 | 56 | 23 | 0 | 29 | 84 | 65 | 120 | 5.97e-15 | 70.1 |
MsG0680033884.01.T01 | MTR_7g028925 | 50.000 | 66 | 30 | 1 | 22 | 87 | 22 | 84 | 7.13e-15 | 67.4 |
MsG0680033884.01.T01 | MTR_2g015050 | 52.174 | 69 | 32 | 1 | 17 | 84 | 122 | 190 | 8.86e-15 | 71.2 |
MsG0680033884.01.T01 | MTR_7g092190 | 60.714 | 56 | 22 | 0 | 29 | 84 | 30 | 85 | 1.05e-14 | 70.9 |
MsG0680033884.01.T01 | MTR_4g054740 | 42.697 | 89 | 45 | 2 | 1 | 88 | 74 | 157 | 1.41e-14 | 70.1 |
MsG0680033884.01.T01 | MTR_2g438180 | 56.452 | 62 | 26 | 1 | 29 | 89 | 14 | 75 | 2.27e-14 | 67.4 |
MsG0680033884.01.T01 | MTR_4g114570 | 57.143 | 56 | 24 | 0 | 29 | 84 | 7 | 62 | 3.07e-14 | 68.6 |
MsG0680033884.01.T01 | MTR_2g014340 | 57.143 | 56 | 24 | 0 | 29 | 84 | 19 | 74 | 4.42e-14 | 68.2 |
MsG0680033884.01.T01 | MTR_3g106290 | 60.714 | 56 | 22 | 0 | 29 | 84 | 8 | 63 | 5.21e-14 | 67.4 |
MsG0680033884.01.T01 | MTR_4g010640 | 57.143 | 56 | 24 | 0 | 29 | 84 | 7 | 62 | 5.43e-14 | 68.2 |
MsG0680033884.01.T01 | MTR_1g048610 | 56.140 | 57 | 24 | 1 | 29 | 84 | 89 | 145 | 6.21e-14 | 68.2 |
MsG0680033884.01.T01 | MTR_4g008860 | 52.778 | 72 | 31 | 1 | 29 | 100 | 8 | 76 | 6.81e-14 | 67.4 |
MsG0680033884.01.T01 | MTR_5g009620 | 50.667 | 75 | 27 | 2 | 16 | 84 | 97 | 167 | 7.11e-14 | 68.9 |
MsG0680033884.01.T01 | MTR_2g103700 | 53.333 | 60 | 28 | 0 | 29 | 88 | 7 | 66 | 8.88e-14 | 66.6 |
MsG0680033884.01.T01 | MTR_2g043040 | 42.353 | 85 | 49 | 0 | 28 | 112 | 18 | 102 | 1.22e-13 | 67.4 |
MsG0680033884.01.T01 | MTR_1g070070 | 56.140 | 57 | 24 | 1 | 29 | 84 | 21 | 77 | 1.47e-13 | 65.5 |
MsG0680033884.01.T01 | MTR_2g014300 | 58.929 | 56 | 23 | 0 | 29 | 84 | 15 | 70 | 1.50e-13 | 65.9 |
MsG0680033884.01.T01 | MTR_2g043020 | 40.659 | 91 | 54 | 0 | 28 | 118 | 18 | 108 | 1.88e-13 | 66.2 |
MsG0680033884.01.T01 | MTR_1g074230 | 57.895 | 57 | 23 | 1 | 29 | 84 | 19 | 75 | 1.94e-13 | 64.7 |
MsG0680033884.01.T01 | MTR_4g100420 | 57.895 | 57 | 23 | 1 | 29 | 84 | 157 | 213 | 2.10e-13 | 67.4 |
MsG0680033884.01.T01 | MTR_3g090760 | 33.871 | 124 | 82 | 0 | 29 | 152 | 113 | 236 | 2.14e-13 | 67.8 |
MsG0680033884.01.T01 | MTR_2g016730 | 41.758 | 91 | 47 | 2 | 18 | 107 | 11 | 96 | 2.27e-13 | 67.8 |
MsG0680033884.01.T01 | MTR_4g100450 | 46.250 | 80 | 42 | 1 | 6 | 84 | 131 | 210 | 2.41e-13 | 67.4 |
MsG0680033884.01.T01 | MTR_4g054360 | 45.122 | 82 | 39 | 2 | 8 | 88 | 108 | 184 | 5.17e-13 | 66.2 |
MsG0680033884.01.T01 | MTR_3g072610 | 48.352 | 91 | 39 | 3 | 29 | 113 | 25 | 113 | 7.23e-13 | 65.1 |
MsG0680033884.01.T01 | MTR_5g085100 | 48.684 | 76 | 36 | 1 | 9 | 84 | 29 | 101 | 1.17e-12 | 65.1 |
MsG0680033884.01.T01 | MTR_4g088005 | 47.826 | 69 | 35 | 1 | 17 | 84 | 45 | 113 | 1.47e-12 | 62.0 |
MsG0680033884.01.T01 | MTR_5g085070 | 41.414 | 99 | 58 | 0 | 29 | 127 | 51 | 149 | 1.50e-12 | 65.1 |
MsG0680033884.01.T01 | MTR_5g008540 | 47.541 | 61 | 32 | 0 | 31 | 91 | 26 | 86 | 2.01e-12 | 61.2 |
MsG0680033884.01.T01 | MTR_8g069360 | 53.571 | 56 | 26 | 0 | 29 | 84 | 44 | 99 | 2.29e-12 | 65.1 |
MsG0680033884.01.T01 | MTR_1g090290 | 51.613 | 62 | 27 | 2 | 24 | 84 | 110 | 169 | 2.47e-12 | 63.2 |
MsG0680033884.01.T01 | MTR_4g111915 | 47.458 | 59 | 31 | 0 | 29 | 87 | 53 | 111 | 2.86e-12 | 62.0 |
MsG0680033884.01.T01 | MTR_1g074250 | 50.820 | 61 | 28 | 1 | 26 | 84 | 16 | 76 | 3.16e-12 | 61.6 |
MsG0680033884.01.T01 | MTR_7g085810 | 44.595 | 74 | 40 | 1 | 29 | 102 | 30 | 102 | 3.49e-12 | 63.5 |
MsG0680033884.01.T01 | MTR_6g041970 | 41.860 | 86 | 37 | 1 | 29 | 114 | 18 | 90 | 3.68e-12 | 60.5 |
MsG0680033884.01.T01 | MTR_5g075570 | 48.333 | 60 | 31 | 0 | 25 | 84 | 120 | 179 | 3.92e-12 | 63.9 |
MsG0680033884.01.T01 | MTR_4g054860 | 44.706 | 85 | 41 | 3 | 5 | 88 | 112 | 191 | 4.18e-12 | 63.5 |
MsG0680033884.01.T01 | MTR_8g099215 | 46.914 | 81 | 34 | 2 | 13 | 84 | 82 | 162 | 8.11e-12 | 63.2 |
MsG0680033884.01.T01 | MTR_4g112490 | 47.458 | 59 | 31 | 0 | 29 | 87 | 53 | 111 | 8.63e-12 | 62.0 |
MsG0680033884.01.T01 | MTR_8g006840 | 52.632 | 57 | 26 | 1 | 29 | 84 | 125 | 181 | 9.99e-12 | 61.6 |
MsG0680033884.01.T01 | MTR_6g029180 | 47.222 | 72 | 37 | 1 | 17 | 88 | 22 | 92 | 1.05e-11 | 62.8 |
MsG0680033884.01.T01 | MTR_8g085960 | 43.421 | 76 | 40 | 2 | 29 | 102 | 25 | 99 | 1.42e-11 | 61.6 |
MsG0680033884.01.T01 | MTR_4g100380 | 56.140 | 57 | 24 | 1 | 29 | 84 | 145 | 201 | 1.63e-11 | 62.0 |
MsG0680033884.01.T01 | MTR_5g032820 | 55.357 | 56 | 25 | 0 | 29 | 84 | 46 | 101 | 1.82e-11 | 62.4 |
MsG0680033884.01.T01 | MTR_2g015040 | 52.632 | 57 | 26 | 1 | 29 | 84 | 63 | 119 | 1.98e-11 | 60.1 |
MsG0680033884.01.T01 | MTR_8g006815 | 52.632 | 57 | 26 | 1 | 29 | 84 | 96 | 152 | 2.00e-11 | 60.8 |
MsG0680033884.01.T01 | MTR_7g081805 | 52.632 | 57 | 26 | 1 | 29 | 84 | 61 | 117 | 2.22e-11 | 60.8 |
MsG0680033884.01.T01 | MTR_7g081815 | 52.632 | 57 | 26 | 1 | 29 | 84 | 61 | 117 | 2.45e-11 | 60.5 |
MsG0680033884.01.T01 | MTR_8g032610 | 52.727 | 55 | 26 | 0 | 31 | 85 | 29 | 83 | 2.50e-11 | 61.6 |
MsG0680033884.01.T01 | MTR_7g011630 | 43.529 | 85 | 39 | 2 | 13 | 97 | 29 | 104 | 2.97e-11 | 62.0 |
MsG0680033884.01.T01 | MTR_3g095190 | 54.795 | 73 | 32 | 1 | 29 | 100 | 170 | 242 | 3.41e-11 | 61.6 |
MsG0680033884.01.T01 | MTR_7g096750 | 54.386 | 57 | 25 | 1 | 29 | 84 | 20 | 76 | 4.14e-11 | 58.5 |
MsG0680033884.01.T01 | MTR_1g070020 | 39.130 | 92 | 53 | 2 | 19 | 109 | 60 | 149 | 5.45e-11 | 59.7 |
MsG0680033884.01.T01 | MTR_6g012970 | 51.786 | 56 | 27 | 0 | 29 | 84 | 38 | 93 | 6.89e-11 | 60.8 |
MsG0680033884.01.T01 | MTR_7g084370 | 47.887 | 71 | 34 | 1 | 29 | 99 | 42 | 109 | 8.30e-11 | 60.1 |
MsG0680033884.01.T01 | MTR_1g069960 | 52.857 | 70 | 31 | 2 | 29 | 97 | 27 | 95 | 9.05e-11 | 58.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680033884.01.T01 | AT4G25470 | 56.345 | 197 | 70 | 5 | 6 | 194 | 28 | 216 | 7.82e-69 | 209 |
MsG0680033884.01.T01 | AT4G25480 | 56.853 | 197 | 67 | 4 | 7 | 194 | 29 | 216 | 2.38e-64 | 197 |
MsG0680033884.01.T01 | AT5G51990 | 54.040 | 198 | 76 | 5 | 6 | 194 | 31 | 222 | 7.69e-63 | 194 |
MsG0680033884.01.T01 | AT4G25490 | 56.566 | 198 | 66 | 5 | 7 | 194 | 26 | 213 | 1.36e-61 | 191 |
MsG0680033884.01.T01 | AT1G12610 | 49.000 | 200 | 90 | 3 | 7 | 194 | 8 | 207 | 2.96e-55 | 174 |
MsG0680033884.01.T01 | AT1G63030 | 49.189 | 185 | 76 | 3 | 12 | 194 | 13 | 181 | 2.44e-54 | 171 |
MsG0680033884.01.T01 | AT1G63030 | 49.189 | 185 | 76 | 3 | 12 | 194 | 13 | 181 | 2.44e-54 | 171 |
MsG0680033884.01.T01 | AT5G25810 | 60.638 | 94 | 36 | 1 | 18 | 110 | 24 | 117 | 5.89e-34 | 120 |
MsG0680033884.01.T01 | AT5G11590 | 46.324 | 136 | 73 | 0 | 25 | 160 | 47 | 182 | 1.32e-32 | 117 |
MsG0680033884.01.T01 | AT2G44940 | 60.215 | 93 | 37 | 0 | 18 | 110 | 89 | 181 | 1.28e-31 | 116 |
MsG0680033884.01.T01 | AT4G32800 | 53.271 | 107 | 44 | 1 | 16 | 116 | 6 | 112 | 1.78e-31 | 114 |
MsG0680033884.01.T01 | AT2G35700 | 63.750 | 80 | 29 | 0 | 24 | 103 | 40 | 119 | 6.82e-31 | 112 |
MsG0680033884.01.T01 | AT2G36450 | 40.437 | 183 | 102 | 4 | 17 | 194 | 3 | 183 | 2.01e-30 | 110 |
MsG0680033884.01.T01 | AT4G16750 | 52.427 | 103 | 44 | 1 | 6 | 103 | 12 | 114 | 2.33e-29 | 107 |
MsG0680033884.01.T01 | AT3G16280 | 63.291 | 79 | 29 | 0 | 25 | 103 | 57 | 135 | 3.01e-29 | 108 |
MsG0680033884.01.T01 | AT3G16280 | 63.291 | 79 | 29 | 0 | 25 | 103 | 75 | 153 | 4.59e-29 | 108 |
MsG0680033884.01.T01 | AT1G01250 | 61.250 | 80 | 31 | 0 | 24 | 103 | 40 | 119 | 6.08e-29 | 106 |
MsG0680033884.01.T01 | AT5G52020 | 44.000 | 175 | 89 | 5 | 25 | 194 | 61 | 231 | 4.72e-28 | 105 |
MsG0680033884.01.T01 | AT3G60490 | 59.756 | 82 | 32 | 1 | 23 | 103 | 64 | 145 | 9.08e-27 | 102 |
MsG0680033884.01.T01 | AT2G25820 | 63.158 | 76 | 28 | 0 | 28 | 103 | 25 | 100 | 1.52e-26 | 101 |
MsG0680033884.01.T01 | AT1G71450 | 48.113 | 106 | 55 | 0 | 28 | 133 | 23 | 128 | 3.91e-24 | 94.0 |
MsG0680033884.01.T01 | AT1G33760 | 56.180 | 89 | 39 | 0 | 29 | 117 | 20 | 108 | 5.51e-21 | 85.9 |
MsG0680033884.01.T01 | AT1G21910 | 47.000 | 100 | 32 | 2 | 29 | 114 | 50 | 142 | 9.57e-21 | 86.3 |
MsG0680033884.01.T01 | AT2G47520 | 29.375 | 160 | 93 | 4 | 5 | 161 | 23 | 165 | 2.46e-20 | 84.0 |
MsG0680033884.01.T01 | AT1G77200 | 61.039 | 77 | 30 | 0 | 27 | 103 | 41 | 117 | 7.04e-20 | 84.3 |
MsG0680033884.01.T01 | AT1G12630 | 40.782 | 179 | 96 | 3 | 25 | 194 | 15 | 192 | 7.18e-19 | 80.5 |
MsG0680033884.01.T01 | AT1G46768 | 58.730 | 63 | 25 | 1 | 24 | 86 | 27 | 88 | 1.49e-18 | 78.6 |
MsG0680033884.01.T01 | AT1G46768 | 58.730 | 63 | 25 | 1 | 24 | 86 | 27 | 88 | 1.57e-18 | 78.6 |
MsG0680033884.01.T01 | AT1G46768 | 58.730 | 63 | 25 | 1 | 24 | 86 | 27 | 88 | 1.57e-18 | 78.6 |
MsG0680033884.01.T01 | AT4G06746 | 43.333 | 90 | 46 | 1 | 1 | 90 | 13 | 97 | 2.19e-18 | 78.2 |
MsG0680033884.01.T01 | AT4G13620 | 61.017 | 59 | 23 | 0 | 28 | 86 | 231 | 289 | 2.37e-18 | 82.0 |
MsG0680033884.01.T01 | AT3G16770 | 55.556 | 72 | 28 | 1 | 15 | 86 | 69 | 136 | 4.75e-18 | 79.7 |
MsG0680033884.01.T01 | AT2G22200 | 53.333 | 75 | 33 | 1 | 28 | 100 | 70 | 144 | 5.82e-18 | 79.7 |
MsG0680033884.01.T01 | AT4G39780 | 48.780 | 82 | 40 | 1 | 3 | 84 | 69 | 148 | 9.40e-18 | 79.3 |
MsG0680033884.01.T01 | AT1G22190 | 54.795 | 73 | 31 | 1 | 14 | 86 | 70 | 140 | 9.73e-18 | 79.0 |
MsG0680033884.01.T01 | AT3G11020 | 52.564 | 78 | 37 | 0 | 23 | 100 | 72 | 149 | 1.21e-17 | 79.7 |
MsG0680033884.01.T01 | AT5G21960 | 48.810 | 84 | 43 | 0 | 27 | 110 | 5 | 88 | 2.52e-17 | 77.0 |
MsG0680033884.01.T01 | AT5G65130 | 53.247 | 77 | 34 | 1 | 14 | 88 | 94 | 170 | 2.99e-17 | 77.8 |
MsG0680033884.01.T01 | AT5G65130 | 53.247 | 77 | 34 | 1 | 14 | 88 | 96 | 172 | 3.00e-17 | 77.8 |
MsG0680033884.01.T01 | AT1G78080 | 47.674 | 86 | 42 | 2 | 1 | 86 | 127 | 209 | 7.06e-17 | 77.4 |
MsG0680033884.01.T01 | AT2G33710 | 47.561 | 82 | 38 | 1 | 24 | 100 | 65 | 146 | 7.51e-17 | 75.9 |
MsG0680033884.01.T01 | AT2G33710 | 47.561 | 82 | 38 | 1 | 24 | 100 | 65 | 146 | 9.80e-17 | 75.9 |
MsG0680033884.01.T01 | AT4G36900 | 56.667 | 60 | 26 | 0 | 25 | 84 | 26 | 85 | 1.02e-16 | 75.1 |
MsG0680033884.01.T01 | AT3G50260 | 35.537 | 121 | 66 | 2 | 22 | 142 | 14 | 122 | 1.04e-16 | 73.9 |
MsG0680033884.01.T01 | AT1G74930 | 45.349 | 86 | 47 | 0 | 29 | 114 | 21 | 106 | 1.08e-16 | 75.1 |
MsG0680033884.01.T01 | AT2G23340 | 39.423 | 104 | 58 | 1 | 29 | 132 | 28 | 126 | 2.80e-16 | 73.6 |
MsG0680033884.01.T01 | AT5G67190 | 57.143 | 56 | 24 | 0 | 29 | 84 | 21 | 76 | 3.58e-16 | 73.2 |
MsG0680033884.01.T01 | AT5G05410 | 53.521 | 71 | 33 | 0 | 29 | 99 | 79 | 149 | 4.09e-16 | 75.1 |
MsG0680033884.01.T01 | AT5G05410 | 52.778 | 72 | 34 | 0 | 29 | 100 | 79 | 150 | 4.75e-16 | 75.1 |
MsG0680033884.01.T01 | AT1G19210 | 43.333 | 90 | 51 | 0 | 29 | 118 | 12 | 101 | 5.90e-16 | 72.8 |
MsG0680033884.01.T01 | AT1G36060 | 61.404 | 57 | 22 | 0 | 28 | 84 | 142 | 198 | 1.20e-15 | 73.9 |
MsG0680033884.01.T01 | AT4G28140 | 55.932 | 59 | 26 | 0 | 28 | 86 | 142 | 200 | 1.40e-15 | 73.6 |
MsG0680033884.01.T01 | AT5G07580 | 50.633 | 79 | 36 | 2 | 23 | 100 | 106 | 182 | 1.51e-15 | 72.0 |
MsG0680033884.01.T01 | AT2G20880 | 59.649 | 57 | 23 | 0 | 28 | 84 | 186 | 242 | 1.71e-15 | 73.6 |
MsG0680033884.01.T01 | AT3G15210 | 50.000 | 82 | 32 | 2 | 29 | 101 | 25 | 106 | 1.76e-15 | 72.4 |
MsG0680033884.01.T01 | AT5G44210 | 52.113 | 71 | 27 | 1 | 29 | 99 | 33 | 96 | 2.76e-15 | 71.2 |
MsG0680033884.01.T01 | AT5G13330 | 54.688 | 64 | 27 | 1 | 25 | 88 | 37 | 98 | 2.81e-15 | 71.6 |
MsG0680033884.01.T01 | AT1G75490 | 51.429 | 70 | 34 | 0 | 28 | 97 | 41 | 110 | 3.43e-15 | 71.2 |
MsG0680033884.01.T01 | AT3G57600 | 51.389 | 72 | 35 | 0 | 13 | 84 | 12 | 83 | 3.83e-15 | 72.0 |
MsG0680033884.01.T01 | AT5G61600 | 60.656 | 61 | 21 | 2 | 25 | 84 | 86 | 144 | 5.43e-15 | 71.2 |
MsG0680033884.01.T01 | AT5G61890 | 54.688 | 64 | 27 | 1 | 25 | 88 | 88 | 149 | 5.60e-15 | 71.2 |
MsG0680033884.01.T01 | AT5G64750 | 41.304 | 92 | 48 | 2 | 39 | 130 | 195 | 280 | 7.63e-15 | 72.0 |
MsG0680033884.01.T01 | AT1G03800 | 51.471 | 68 | 30 | 1 | 17 | 84 | 44 | 108 | 1.12e-14 | 70.5 |
MsG0680033884.01.T01 | AT5G51190 | 57.143 | 63 | 24 | 2 | 23 | 84 | 68 | 128 | 1.44e-14 | 69.7 |
MsG0680033884.01.T01 | AT1G72360 | 44.737 | 76 | 42 | 0 | 9 | 84 | 54 | 129 | 1.88e-14 | 70.1 |
MsG0680033884.01.T01 | AT1G15360 | 58.929 | 56 | 23 | 0 | 29 | 84 | 7 | 62 | 1.92e-14 | 68.9 |
MsG0680033884.01.T01 | AT1G15360 | 58.929 | 56 | 23 | 0 | 29 | 84 | 7 | 62 | 1.92e-14 | 68.9 |
MsG0680033884.01.T01 | AT1G72360 | 49.206 | 63 | 32 | 0 | 22 | 84 | 18 | 80 | 2.10e-14 | 68.9 |
MsG0680033884.01.T01 | AT4G11140 | 41.935 | 93 | 41 | 2 | 29 | 114 | 87 | 173 | 2.19e-14 | 70.1 |
MsG0680033884.01.T01 | AT5G47230 | 52.778 | 72 | 33 | 1 | 14 | 84 | 141 | 212 | 2.19e-14 | 70.5 |
MsG0680033884.01.T01 | AT5G43410 | 55.000 | 60 | 26 | 1 | 26 | 84 | 12 | 71 | 2.63e-14 | 67.0 |
MsG0680033884.01.T01 | AT4G27950 | 56.140 | 57 | 25 | 0 | 29 | 85 | 118 | 174 | 3.23e-14 | 70.1 |
MsG0680033884.01.T01 | AT3G61630 | 46.835 | 79 | 36 | 1 | 29 | 107 | 105 | 177 | 4.60e-14 | 69.7 |
MsG0680033884.01.T01 | AT1G71520 | 35.461 | 141 | 69 | 6 | 23 | 157 | 8 | 132 | 5.29e-14 | 66.6 |
MsG0680033884.01.T01 | AT1G72360 | 49.206 | 63 | 32 | 0 | 22 | 84 | 69 | 131 | 5.75e-14 | 68.6 |
MsG0680033884.01.T01 | AT5G25190 | 52.941 | 68 | 32 | 0 | 29 | 96 | 8 | 75 | 5.75e-14 | 67.4 |
MsG0680033884.01.T01 | AT1G22810 | 39.785 | 93 | 41 | 2 | 29 | 113 | 14 | 99 | 6.00e-14 | 66.6 |
MsG0680033884.01.T01 | AT3G23230 | 51.613 | 62 | 29 | 1 | 29 | 89 | 20 | 81 | 9.08e-14 | 65.9 |
MsG0680033884.01.T01 | AT5G25390 | 55.357 | 56 | 25 | 0 | 29 | 84 | 7 | 62 | 9.14e-14 | 67.0 |
MsG0680033884.01.T01 | AT1G43160 | 38.931 | 131 | 67 | 4 | 29 | 158 | 61 | 179 | 9.72e-14 | 67.0 |
MsG0680033884.01.T01 | AT4G31060 | 41.463 | 82 | 44 | 1 | 7 | 84 | 1 | 82 | 1.10e-13 | 66.6 |
MsG0680033884.01.T01 | AT2G40340 | 46.479 | 71 | 38 | 0 | 29 | 99 | 14 | 84 | 2.57e-13 | 67.0 |
MsG0680033884.01.T01 | AT2G40340 | 46.479 | 71 | 38 | 0 | 29 | 99 | 14 | 84 | 2.57e-13 | 67.0 |
MsG0680033884.01.T01 | AT2G40340 | 46.479 | 71 | 38 | 0 | 29 | 99 | 14 | 84 | 2.57e-13 | 67.0 |
MsG0680033884.01.T01 | AT3G20310 | 53.226 | 62 | 29 | 0 | 23 | 84 | 21 | 82 | 2.80e-13 | 66.6 |
MsG0680033884.01.T01 | AT2G40340 | 33.858 | 127 | 77 | 2 | 29 | 155 | 72 | 191 | 3.35e-13 | 67.0 |
MsG0680033884.01.T01 | AT5G53290 | 54.386 | 57 | 26 | 0 | 29 | 85 | 125 | 181 | 4.39e-13 | 67.0 |
MsG0680033884.01.T01 | AT5G18450 | 46.250 | 80 | 39 | 1 | 5 | 84 | 14 | 89 | 5.12e-13 | 66.6 |
MsG0680033884.01.T01 | AT1G28370 | 55.357 | 56 | 25 | 0 | 29 | 84 | 20 | 75 | 5.23e-13 | 64.3 |
MsG0680033884.01.T01 | AT1G28360 | 58.929 | 56 | 23 | 0 | 29 | 84 | 12 | 67 | 5.37e-13 | 65.1 |
MsG0680033884.01.T01 | AT2G40340 | 46.479 | 71 | 38 | 0 | 29 | 99 | 72 | 142 | 5.81e-13 | 66.6 |
MsG0680033884.01.T01 | AT2G40340 | 46.479 | 71 | 38 | 0 | 29 | 99 | 79 | 149 | 5.91e-13 | 66.6 |
MsG0680033884.01.T01 | AT4G17490 | 48.780 | 82 | 37 | 3 | 6 | 84 | 114 | 193 | 6.30e-13 | 66.2 |
MsG0680033884.01.T01 | AT1G28370 | 55.357 | 56 | 25 | 0 | 29 | 84 | 58 | 113 | 7.24e-13 | 64.7 |
MsG0680033884.01.T01 | AT4G23750 | 52.632 | 57 | 27 | 0 | 29 | 85 | 122 | 178 | 1.03e-12 | 65.9 |
MsG0680033884.01.T01 | AT4G23750 | 52.632 | 57 | 27 | 0 | 29 | 85 | 122 | 178 | 1.03e-12 | 65.9 |
MsG0680033884.01.T01 | AT1G50640 | 57.143 | 56 | 24 | 0 | 29 | 84 | 28 | 83 | 1.47e-12 | 64.3 |
MsG0680033884.01.T01 | AT5G47220 | 56.140 | 57 | 24 | 1 | 29 | 84 | 117 | 173 | 1.85e-12 | 64.3 |
MsG0680033884.01.T01 | AT2G46310 | 51.786 | 56 | 27 | 0 | 29 | 84 | 99 | 154 | 2.12e-12 | 64.7 |
MsG0680033884.01.T01 | AT5G19790 | 53.448 | 58 | 27 | 0 | 29 | 86 | 22 | 79 | 2.98e-12 | 63.9 |
MsG0680033884.01.T01 | AT5G61590 | 52.500 | 80 | 35 | 2 | 19 | 97 | 99 | 176 | 3.61e-12 | 62.8 |
MsG0680033884.01.T01 | AT1G12890 | 44.872 | 78 | 40 | 1 | 7 | 84 | 2 | 76 | 4.14e-12 | 63.2 |
MsG0680033884.01.T01 | AT1G77640 | 45.556 | 90 | 43 | 1 | 29 | 112 | 43 | 132 | 1.05e-11 | 62.4 |
MsG0680033884.01.T01 | AT4G17500 | 56.140 | 57 | 24 | 1 | 29 | 84 | 148 | 204 | 1.43e-11 | 62.0 |
MsG0680033884.01.T01 | AT3G23240 | 50.000 | 58 | 28 | 1 | 29 | 85 | 82 | 139 | 1.46e-11 | 61.6 |
MsG0680033884.01.T01 | AT1G24590 | 50.769 | 65 | 29 | 1 | 29 | 93 | 58 | 119 | 2.09e-11 | 62.0 |
MsG0680033884.01.T01 | AT1G12980 | 55.357 | 56 | 25 | 0 | 29 | 84 | 57 | 112 | 2.55e-11 | 62.0 |
MsG0680033884.01.T01 | AT2G44840 | 54.386 | 57 | 25 | 1 | 29 | 84 | 92 | 148 | 2.87e-11 | 60.8 |
MsG0680033884.01.T01 | AT5G25390 | 51.786 | 56 | 24 | 1 | 29 | 84 | 7 | 59 | 3.64e-11 | 59.7 |
MsG0680033884.01.T01 | AT5G07310 | 46.835 | 79 | 40 | 1 | 6 | 84 | 71 | 147 | 5.64e-11 | 60.5 |
MsG0680033884.01.T01 | AT2G40350 | 48.214 | 56 | 29 | 0 | 29 | 84 | 74 | 129 | 6.06e-11 | 58.9 |
MsG0680033884.01.T01 | AT2G40350 | 48.214 | 56 | 29 | 0 | 29 | 84 | 67 | 122 | 7.59e-11 | 58.5 |
Find 58 sgRNAs with CRISPR-Local
Find 62 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTAATATATACATATGTTT+AGG | 0.215595 | 6:+75631308 | None:intergenic |
GGAAGAGGAACTTAGATAAA+TGG | 0.256718 | 6:+75631419 | MsG0680033884.01.T01:CDS |
ACGTTGCAGCGATGGCATTA+AGG | 0.265866 | 6:+75631527 | MsG0680033884.01.T01:CDS |
TTTCTCCCTGCTGGTTTCTT+CGG | 0.268369 | 6:-75631355 | None:intergenic |
CTAATATATACATATGTTTA+GGG | 0.296079 | 6:+75631309 | None:intergenic |
TTCTCCCTGCTGGTTTCTTC+GGG | 0.296529 | 6:-75631354 | None:intergenic |
AGCAGGGAGAAAGAAATTTA+AGG | 0.304894 | 6:+75631366 | MsG0680033884.01.T01:CDS |
CAAATCCTAGTCTTCTTGTT+TGG | 0.307227 | 6:-75631460 | None:intergenic |
TTAAATTTCTTTCTCCCTGC+TGG | 0.331988 | 6:-75631364 | None:intergenic |
GCCAGAGTTGTGGAGGAATA+TGG | 0.338237 | 6:+75631792 | MsG0680033884.01.T01:CDS |
CGTTGCAGCGATGGCATTAA+GGG | 0.377499 | 6:+75631528 | MsG0680033884.01.T01:CDS |
TCGCTGCAACGTCGTGTGCT+CGG | 0.389912 | 6:-75631516 | None:intergenic |
CGCTGCAACGTCGTGTGCTC+GGG | 0.398592 | 6:-75631515 | None:intergenic |
AATGTCCCCTACACATAGTT+TGG | 0.427502 | 6:+75631819 | MsG0680033884.01.T01:CDS |
CAAACAAGAAGACTAGGATT+TGG | 0.429238 | 6:+75631461 | MsG0680033884.01.T01:CDS |
GAAGAGGAACTTAGATAAAT+GGG | 0.434368 | 6:+75631420 | MsG0680033884.01.T01:CDS |
TGTATAGAGGTGTGAGGAAG+AGG | 0.474025 | 6:+75631404 | MsG0680033884.01.T01:CDS |
CTGAAACAAAAGACATTCAA+AGG | 0.491926 | 6:+75631611 | MsG0680033884.01.T01:CDS |
ACTCGCCACCCGGTGTATAG+AGG | 0.496516 | 6:+75631391 | MsG0680033884.01.T01:CDS |
GTAGTCGTTAAAGTCTTGTC+TGG | 0.505167 | 6:-75631664 | None:intergenic |
GCCATATTCCTCCACAACTC+TGG | 0.506491 | 6:-75631793 | None:intergenic |
CATGCACCAAACTATGTGTA+GGG | 0.511168 | 6:-75631825 | None:intergenic |
CGGGCAGCCATCTCAGCCGT+TGG | 0.512810 | 6:-75631496 | None:intergenic |
GGCAGCTGCAGAAGCCGCTG+AGG | 0.513356 | 6:+75631633 | MsG0680033884.01.T01:CDS |
TGTGGAAGTCGAAGAAGAAG+AGG | 0.518171 | 6:+75631756 | MsG0680033884.01.T01:CDS |
AGCACACGACGTTGCAGCGA+TGG | 0.528674 | 6:+75631519 | MsG0680033884.01.T01:CDS |
TACTGACATTGACACGGTTG+TGG | 0.536605 | 6:+75631684 | MsG0680033884.01.T01:CDS |
TGTACAATTTCAAGAGGAAG+AGG | 0.538906 | 6:+75631864 | MsG0680033884.01.T01:CDS |
TGTCGTTGCAGTCGAAGAAG+AGG | 0.540894 | 6:+75631711 | MsG0680033884.01.T01:CDS |
AGTTGCCCGAAGAAACCAGC+AGG | 0.545231 | 6:+75631349 | MsG0680033884.01.T01:CDS |
CGAGTCTGCAAAATTGAGAC+AGG | 0.547018 | 6:-75631560 | None:intergenic |
AAGAAGACTAGGATTTGGCT+AGG | 0.552639 | 6:+75631466 | MsG0680033884.01.T01:CDS |
TAAATGGGTGTGTGAAATGA+GGG | 0.554317 | 6:+75631435 | MsG0680033884.01.T01:CDS |
TGAAACAAAAGACATTCAAA+GGG | 0.555993 | 6:+75631612 | MsG0680033884.01.T01:CDS |
GTTTCAGAAGAGGCAGGAGT+AGG | 0.561690 | 6:-75631595 | None:intergenic |
GTTTAGGGAGGGGCAATTAG+CGG | 0.561963 | 6:+75631324 | MsG0680033884.01.T01:CDS |
TATATACATATGTTTAGGGA+GGG | 0.562832 | 6:+75631313 | None:intergenic |
ATTTAAGGAGACTCGCCACC+CGG | 0.564242 | 6:+75631381 | MsG0680033884.01.T01:CDS |
ATATACATATGTTTAGGGAG+GGG | 0.565127 | 6:+75631314 | None:intergenic |
TCATGCACCAAACTATGTGT+AGG | 0.576797 | 6:-75631826 | None:intergenic |
TTCCTCACACCTCTATACAC+CGG | 0.578151 | 6:-75631400 | None:intergenic |
TCCTCACACCTCTATACACC+GGG | 0.580421 | 6:-75631399 | None:intergenic |
GGGAACCAAACAAGAAGACT+AGG | 0.587015 | 6:+75631455 | MsG0680033884.01.T01:CDS |
ATAAATGGGTGTGTGAAATG+AGG | 0.599450 | 6:+75631434 | MsG0680033884.01.T01:CDS |
AAGAGGAAGAGGTATCGCTA+TGG | 0.611105 | 6:+75631875 | MsG0680033884.01.T01:CDS |
AACGACTACTGACATTGACA+CGG | 0.611733 | 6:+75631678 | MsG0680033884.01.T01:CDS |
TGTTGAATATGCCAGAGTTG+TGG | 0.615027 | 6:+75631782 | MsG0680033884.01.T01:CDS |
ATATATACATATGTTTAGGG+AGG | 0.634372 | 6:+75631312 | None:intergenic |
GTTGCAGCGATGGCATTAAG+GGG | 0.638430 | 6:+75631529 | MsG0680033884.01.T01:CDS |
AGAAGACTAGGATTTGGCTA+GGG | 0.661545 | 6:+75631467 | MsG0680033884.01.T01:CDS |
TTCTTCGACTGCAACGACAA+CGG | 0.675808 | 6:-75631707 | None:intergenic |
GTCTGGTCTGAAAGCCTCAG+CGG | 0.676858 | 6:-75631647 | None:intergenic |
ATGCACCAAACTATGTGTAG+GGG | 0.684106 | 6:-75631824 | None:intergenic |
TGAATATGCCAGAGTTGTGG+AGG | 0.686416 | 6:+75631785 | MsG0680033884.01.T01:CDS |
CAAAATTGAGACAGGCGTAG+CGG | 0.688544 | 6:-75631552 | None:intergenic |
ACCCGGTGTATAGAGGTGTG+AGG | 0.705873 | 6:+75631398 | MsG0680033884.01.T01:CDS |
TCACACCTCTATACACCGGG+TGG | 0.726886 | 6:-75631396 | None:intergenic |
GTTGCCCGAAGAAACCAGCA+GGG | 0.737979 | 6:+75631350 | MsG0680033884.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | TGAAACAAAAGACATTCAAA+GGG | + | Chr6:75631612-75631631 | MsG0680033884.01.T01:CDS | 25.0% |
!! | TTTTGATGTACAATTTCAAG+AGG | + | Chr6:75631858-75631877 | MsG0680033884.01.T01:CDS | 25.0% |
CTGAAACAAAAGACATTCAA+AGG | + | Chr6:75631611-75631630 | MsG0680033884.01.T01:CDS | 30.0% | |
GAAGAGGAACTTAGATAAAT+GGG | + | Chr6:75631420-75631439 | MsG0680033884.01.T01:CDS | 30.0% | |
!! | AATGTCTTTTGTTTCAGAAG+AGG | - | Chr6:75631608-75631627 | None:intergenic | 30.0% |
AGCAGGGAGAAAGAAATTTA+AGG | + | Chr6:75631366-75631385 | MsG0680033884.01.T01:CDS | 35.0% | |
ATAAATGGGTGTGTGAAATG+AGG | + | Chr6:75631434-75631453 | MsG0680033884.01.T01:CDS | 35.0% | |
CAAACAAGAAGACTAGGATT+TGG | + | Chr6:75631461-75631480 | MsG0680033884.01.T01:CDS | 35.0% | |
GGAAGAGGAACTTAGATAAA+TGG | + | Chr6:75631419-75631438 | MsG0680033884.01.T01:CDS | 35.0% | |
TAAATGGGTGTGTGAAATGA+GGG | + | Chr6:75631435-75631454 | MsG0680033884.01.T01:CDS | 35.0% | |
TGTACAATTTCAAGAGGAAG+AGG | + | Chr6:75631864-75631883 | MsG0680033884.01.T01:CDS | 35.0% | |
TTAAATTTCTTTCTCCCTGC+TGG | - | Chr6:75631367-75631386 | None:intergenic | 35.0% | |
! | CAAATCCTAGTCTTCTTGTT+TGG | - | Chr6:75631463-75631482 | None:intergenic | 35.0% |
!! | AGTGCTGAATATGTTTTGTG+TGG | + | Chr6:75631738-75631757 | MsG0680033884.01.T01:CDS | 35.0% |
AACGACTACTGACATTGACA+CGG | + | Chr6:75631678-75631697 | MsG0680033884.01.T01:CDS | 40.0% | |
AAGAAGACTAGGATTTGGCT+AGG | + | Chr6:75631466-75631485 | MsG0680033884.01.T01:CDS | 40.0% | |
AATGTCCCCTACACATAGTT+TGG | + | Chr6:75631819-75631838 | MsG0680033884.01.T01:CDS | 40.0% | |
AGAAGACTAGGATTTGGCTA+GGG | + | Chr6:75631467-75631486 | MsG0680033884.01.T01:CDS | 40.0% | |
ATGCACCAAACTATGTGTAG+GGG | - | Chr6:75631827-75631846 | None:intergenic | 40.0% | |
CATGCACCAAACTATGTGTA+GGG | - | Chr6:75631828-75631847 | None:intergenic | 40.0% | |
TCATGCACCAAACTATGTGT+AGG | - | Chr6:75631829-75631848 | None:intergenic | 40.0% | |
TGTTGAATATGCCAGAGTTG+TGG | + | Chr6:75631782-75631801 | MsG0680033884.01.T01:CDS | 40.0% | |
! | CTGTCTCAATTTTGCAGACT+CGG | + | Chr6:75631561-75631580 | MsG0680033884.01.T01:CDS | 40.0% |
! | GTAGTCGTTAAAGTCTTGTC+TGG | - | Chr6:75631667-75631686 | None:intergenic | 40.0% |
!! | TCTTTTGTTTCAGAAGAGGC+AGG | - | Chr6:75631604-75631623 | None:intergenic | 40.0% |
CAAAATTGAGACAGGCGTAG+CGG | - | Chr6:75631555-75631574 | None:intergenic | 45.0% | |
CGAGTCTGCAAAATTGAGAC+AGG | - | Chr6:75631563-75631582 | None:intergenic | 45.0% | |
GGGAACCAAACAAGAAGACT+AGG | + | Chr6:75631455-75631474 | MsG0680033884.01.T01:CDS | 45.0% | |
TACTGACATTGACACGGTTG+TGG | + | Chr6:75631684-75631703 | MsG0680033884.01.T01:CDS | 45.0% | |
TGAATATGCCAGAGTTGTGG+AGG | + | Chr6:75631785-75631804 | MsG0680033884.01.T01:CDS | 45.0% | |
TGTGGAAGTCGAAGAAGAAG+AGG | + | Chr6:75631756-75631775 | MsG0680033884.01.T01:CDS | 45.0% | |
TTCCTCACACCTCTATACAC+CGG | - | Chr6:75631403-75631422 | None:intergenic | 45.0% | |
TTCTTCGACTGCAACGACAA+CGG | - | Chr6:75631710-75631729 | None:intergenic | 45.0% | |
! | TGTATAGAGGTGTGAGGAAG+AGG | + | Chr6:75631404-75631423 | MsG0680033884.01.T01:CDS | 45.0% |
! | TTGGCTAGGGACTTTTCCAA+CGG | + | Chr6:75631480-75631499 | MsG0680033884.01.T01:CDS | 45.0% |
!! | AAGAGGAAGAGGTATCGCTA+TGG | + | Chr6:75631875-75631894 | MsG0680033884.01.T01:CDS | 45.0% |
!! | TTTCTCCCTGCTGGTTTCTT+CGG | - | Chr6:75631358-75631377 | None:intergenic | 45.0% |
!!! | TCAATTTTGCAGACTCGGTG+TGG | + | Chr6:75631566-75631585 | MsG0680033884.01.T01:CDS | 45.0% |
ACGTTGCAGCGATGGCATTA+AGG | + | Chr6:75631527-75631546 | MsG0680033884.01.T01:CDS | 50.0% | |
ATTTAAGGAGACTCGCCACC+CGG | + | Chr6:75631381-75631400 | MsG0680033884.01.T01:CDS | 50.0% | |
CGTTGCAGCGATGGCATTAA+GGG | + | Chr6:75631528-75631547 | MsG0680033884.01.T01:CDS | 50.0% | |
GCCAGAGTTGTGGAGGAATA+TGG | + | Chr6:75631792-75631811 | MsG0680033884.01.T01:CDS | 50.0% | |
GCCATATTCCTCCACAACTC+TGG | - | Chr6:75631796-75631815 | None:intergenic | 50.0% | |
GTTGCAGCGATGGCATTAAG+GGG | + | Chr6:75631529-75631548 | MsG0680033884.01.T01:CDS | 50.0% | |
GTTTAGGGAGGGGCAATTAG+CGG | + | Chr6:75631324-75631343 | MsG0680033884.01.T01:CDS | 50.0% | |
GTTTCAGAAGAGGCAGGAGT+AGG | - | Chr6:75631598-75631617 | None:intergenic | 50.0% | |
TCCTCACACCTCTATACACC+GGG | - | Chr6:75631402-75631421 | None:intergenic | 50.0% | |
TGTCGTTGCAGTCGAAGAAG+AGG | + | Chr6:75631711-75631730 | MsG0680033884.01.T01:CDS | 50.0% | |
! | GACTTTTCCAACGGCTGAGA+TGG | + | Chr6:75631489-75631508 | MsG0680033884.01.T01:CDS | 50.0% |
!! | TTCTCCCTGCTGGTTTCTTC+GGG | - | Chr6:75631357-75631376 | None:intergenic | 50.0% |
!!! | ATTTTGCAGACTCGGTGTGG+AGG | + | Chr6:75631569-75631588 | MsG0680033884.01.T01:CDS | 50.0% |
AGTTGCCCGAAGAAACCAGC+AGG | + | Chr6:75631349-75631368 | MsG0680033884.01.T01:CDS | 55.0% | |
GTCTGGTCTGAAAGCCTCAG+CGG | - | Chr6:75631650-75631669 | None:intergenic | 55.0% | |
GTTGCCCGAAGAAACCAGCA+GGG | + | Chr6:75631350-75631369 | MsG0680033884.01.T01:CDS | 55.0% | |
TCACACCTCTATACACCGGG+TGG | - | Chr6:75631399-75631418 | None:intergenic | 55.0% | |
! | ACCCGGTGTATAGAGGTGTG+AGG | + | Chr6:75631398-75631417 | MsG0680033884.01.T01:CDS | 55.0% |
ACTCGCCACCCGGTGTATAG+AGG | + | Chr6:75631391-75631410 | MsG0680033884.01.T01:CDS | 60.0% | |
AGCACACGACGTTGCAGCGA+TGG | + | Chr6:75631519-75631538 | MsG0680033884.01.T01:CDS | 60.0% | |
TCGCTGCAACGTCGTGTGCT+CGG | - | Chr6:75631519-75631538 | None:intergenic | 60.0% | |
CGCTGCAACGTCGTGTGCTC+GGG | - | Chr6:75631518-75631537 | None:intergenic | 65.0% | |
CGGGCAGCCATCTCAGCCGT+TGG | - | Chr6:75631499-75631518 | None:intergenic | 70.0% | |
GGCAGCTGCAGAAGCCGCTG+AGG | + | Chr6:75631633-75631652 | MsG0680033884.01.T01:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr6 | gene | 75631322 | 75631906 | 75631322 | ID=MsG0680033884.01;Name=MsG0680033884.01 |
Chr6 | mRNA | 75631322 | 75631906 | 75631322 | ID=MsG0680033884.01.T01;Parent=MsG0680033884.01;Name=MsG0680033884.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|194 |
Chr6 | exon | 75631322 | 75631906 | 75631322 | ID=MsG0680033884.01.T01:exon:15552;Parent=MsG0680033884.01.T01 |
Chr6 | CDS | 75631322 | 75631906 | 75631322 | ID=MsG0680033884.01.T01:cds;Parent=MsG0680033884.01.T01 |
Gene Sequence |
Protein sequence |