AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580029751.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029751.01.T01 MTR_5g091960 91.935 248 20 0 1 248 1 248 1.87e-171 473
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029751.01.T01 AT1G06460 40.000 260 126 7 16 248 18 274 9.51e-51 167

Find 52 sgRNAs with CRISPR-Local

Find 145 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAATACACCATTCTGAAAT+TGG 0.251394 5:-101535929 MsG0580029751.01.T01:intron
CATGGCTCTCTTGCATAATT+AGG 0.258582 5:+101536109 None:intergenic
GATTCTGCAACATCCATTCT+TGG 0.264287 5:+101535781 None:intergenic
CAAAGACTTCACATAGTAAA+TGG 0.272754 5:+101537486 None:intergenic
ACGATTGATTCTTTCCTTGC+AGG 0.285486 5:+101536076 None:intergenic
CCTTGTATATTCTGTTTGCT+TGG 0.343416 5:+101535974 None:intergenic
CGCCAAGCATCTGCTTCCTT+TGG 0.352894 5:-101536506 MsG0580029751.01.T01:CDS
GTAGACGCTCTACTAGTTCT+TGG 0.370835 5:-101535408 MsG0580029751.01.T01:CDS
TATGAAGAAAATGAAGCATT+TGG 0.403591 5:+101535370 None:intergenic
GCTTAGGAGATGTGACAATA+AGG 0.409685 5:-101536540 MsG0580029751.01.T01:CDS
CCACGTTAACTAGCTAGAAA+TGG 0.426131 5:-101537459 MsG0580029751.01.T01:exon
ATCTACCCATCTTCTGCCTA+TGG 0.436149 5:-101537369 MsG0580029751.01.T01:intron
ATGGACCATATGAGGTTGTT+TGG 0.454708 5:-101535327 MsG0580029751.01.T01:CDS
AATTGAGTGGTCACCAAGAA+TGG 0.455876 5:-101535794 MsG0580029751.01.T01:CDS
CTTGCAGGTCTTGCAAAACA+TGG 0.457049 5:+101536091 None:intergenic
GTTATCATGGTAGAAGTTCC+TGG 0.470836 5:-101535745 MsG0580029751.01.T01:CDS
AGTGGCCAAACAACCTCATA+TGG 0.481163 5:+101535322 None:intergenic
ACTAGTTCTTGGAGAGAAGC+AGG 0.485633 5:-101535397 MsG0580029751.01.T01:CDS
AGATTACCATAGGCAGAAGA+TGG 0.487818 5:+101537363 None:intergenic
AGAAAGTAAATATGTTATCA+TGG 0.491749 5:-101535758 MsG0580029751.01.T01:CDS
ACCAATGTGGCTAAATATGA+AGG 0.493398 5:-101536133 MsG0580029751.01.T01:CDS
GACCAAAGGAAGCAGATGCT+TGG 0.495821 5:+101536504 None:intergenic
CTCATCACTGGAAGCAAAGT+GGG 0.498257 5:+101537397 None:intergenic
CACAAGAGGGAGATACTGTA+TGG 0.508140 5:-101535346 MsG0580029751.01.T01:CDS
GTAGTCTGAACTCTGTGCTT+AGG 0.510140 5:-101536556 MsG0580029751.01.T01:CDS
GGTAGATGAAATCTCATCAC+TGG 0.521787 5:+101537385 None:intergenic
TTGTTCACACGAGGAGGAAG+TGG 0.523682 5:+101535304 None:intergenic
GATACTGTATGGACCATATG+AGG 0.529593 5:-101535335 MsG0580029751.01.T01:CDS
ACCTTCATATTTAGCCACAT+TGG 0.536522 5:+101536132 None:intergenic
CCAAGCAAACAGAATATACA+AGG 0.537645 5:-101535974 MsG0580029751.01.T01:CDS
TTTGACAGATTGTCGATCAA+AGG 0.549000 5:-101535430 MsG0580029751.01.T01:intron
GCTAATCACCAATTTCAGAA+TGG 0.565371 5:+101535921 None:intergenic
GCTAGAAATGGAGAATGAGT+TGG 0.569649 5:-101537447 MsG0580029751.01.T01:exon
TTGCTTGGCCTAGAAAATGA+AGG 0.570216 5:+101535989 None:intergenic
ACTTCCTCCTCGTGTGAACA+AGG 0.571990 5:-101535302 MsG0580029751.01.T01:CDS
GAGGCAGACATCAGCTGAAG+AGG 0.577256 5:-101536474 MsG0580029751.01.T01:intron
CCATTTCTAGCTAGTTAACG+TGG 0.587217 5:+101537459 None:intergenic
GAAGTTCCTGGTGTCAGTGT+GGG 0.593787 5:-101535733 MsG0580029751.01.T01:CDS
ATGTCACCCACACTGACACC+AGG 0.596279 5:+101535727 None:intergenic
GATTACCATAGGCAGAAGAT+GGG 0.610033 5:+101537364 None:intergenic
TCTCATCACTGGAAGCAAAG+TGG 0.610564 5:+101537396 None:intergenic
AGAAGTTCCTGGTGTCAGTG+TGG 0.614191 5:-101535734 MsG0580029751.01.T01:CDS
CTGCCTCATAAAATGACCAA+AGG 0.623308 5:+101536490 None:intergenic
TAAATGGATAACGCAGAATG+TGG 0.625298 5:+101537502 None:intergenic
CAACCAATGACTAAAATGCA+AGG 0.630284 5:-101536037 MsG0580029751.01.T01:CDS
TTGTCCTTGTTCACACGAGG+AGG 0.635624 5:+101535298 None:intergenic
CTTGGCCTAGAAAATGAAGG+TGG 0.645955 5:+101535992 None:intergenic
CAGTGTGGGTGACATAAGAG+TGG 0.654535 5:-101535719 MsG0580029751.01.T01:CDS
TCTCCCTATCAGAATTGCAG+TGG 0.660004 5:-101536578 MsG0580029751.01.T01:intron
ACATTGTCCTTGTTCACACG+AGG 0.684915 5:+101535295 None:intergenic
TGTTGCTCCTAAAACCAATG+TGG 0.717404 5:-101536146 MsG0580029751.01.T01:CDS
TGTGGGTGACATAAGAGTGG+AGG 0.734282 5:-101535716 MsG0580029751.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAGTTATATCTTGTATTAA+TGG - Chr5:101535514-101535533 MsG0580029751.01.T01:intron 15.0%
!! TGATTACAAGTTATAATATA+TGG - Chr5:101536902-101536921 MsG0580029751.01.T01:intron 15.0%
!! TGTAATTATTAACTTTACAT+CGG - Chr5:101536568-101536587 MsG0580029751.01.T01:CDS 15.0%
!!! AATTATGATCATTTTGAAAA+AGG + Chr5:101535984-101536003 None:intergenic 15.0%
!!! TTTTTCAAAATGATCATAAT+TGG - Chr5:101535983-101536002 MsG0580029751.01.T01:CDS 15.0%
!! AAAATACCGAAATTGAAATT+TGG + Chr5:101536440-101536459 None:intergenic 20.0%
!! AATATGGAAATTCTGAATTA+GGG + Chr5:101535672-101535691 None:intergenic 20.0%
!! AGAAAGTAAATATGTTATCA+TGG - Chr5:101537021-101537040 MsG0580029751.01.T01:intron 20.0%
!! ATCAAAAATAGGATAACAAT+TGG + Chr5:101536141-101536160 None:intergenic 20.0%
!! TGGTGATATTTATATAACTT+TGG - Chr5:101535534-101535553 MsG0580029751.01.T01:intron 20.0%
!!! AATATATGGTTAGCTAAATA+TGG - Chr5:101536916-101536935 MsG0580029751.01.T01:intron 20.0%
!!! TTTTTATTGTCTGATTAAGA+AGG + Chr5:101536010-101536029 None:intergenic 20.0%
! AATTATCCTATTAGAAACCA+GGG - Chr5:101536108-101536127 MsG0580029751.01.T01:CDS 25.0%
! ATACATAAGAGCAATGAATT+TGG + Chr5:101536537-101536556 None:intergenic 25.0%
! ATGATAGATTAGATTACCAT+AGG + Chr5:101535429-101535448 None:intergenic 25.0%
! CAAAAACATATATTGCTTGA+TGG + Chr5:101535814-101535833 None:intergenic 25.0%
! GAAACAAGAAACAAAATTAG+AGG + Chr5:101535749-101535768 None:intergenic 25.0%
! GAAACAGATTCATCAAAAAT+AGG + Chr5:101536152-101536171 None:intergenic 25.0%
! GAATATGGAAATTCTGAATT+AGG + Chr5:101535673-101535692 None:intergenic 25.0%
! TAATTATCCTATTAGAAACC+AGG - Chr5:101536107-101536126 MsG0580029751.01.T01:CDS 25.0%
! TGATTGATGAACAAACAATT+TGG + Chr5:101536174-101536193 None:intergenic 25.0%
! TTGCAATTTATGGTACTATT+AGG - Chr5:101537282-101537301 MsG0580029751.01.T01:intron 25.0%
!! ATTTTCTTCATATCACAAGA+GGG - Chr5:101537420-101537439 MsG0580029751.01.T01:CDS 25.0%
!! TATGAAGAAAATGAAGCATT+TGG + Chr5:101537412-101537431 None:intergenic 25.0%
!!! AATAGGATAACAATTGGTTT+TGG + Chr5:101536135-101536154 None:intergenic 25.0%
!!! TTTTCTGAAATGGATCAAAT+TGG + Chr5:101536070-101536089 None:intergenic 25.0%
AAATTCCCAATCTTGAACTT+AGG + Chr5:101535632-101535651 None:intergenic 30.0%
AATTCCCAATCTTGAACTTA+GGG + Chr5:101535631-101535650 None:intergenic 30.0%
ACTGCTCGATATTGATATAA+TGG - Chr5:101536462-101536481 MsG0580029751.01.T01:intron 30.0%
AGTTGGAATATGCAATTTCA+TGG + Chr5:101536505-101536524 None:intergenic 30.0%
ATAATAGCAAGTGCAGAATA+TGG + Chr5:101535688-101535707 None:intergenic 30.0%
CAAAGACTTCACATAGTAAA+TGG + Chr5:101535296-101535315 None:intergenic 30.0%
CCTGTAAAAGGGAAAAAAAA+GGG + Chr5:101536965-101536984 None:intergenic 30.0%
GATGGTCCAAATTTCAATTT+CGG - Chr5:101536431-101536450 MsG0580029751.01.T01:intron 30.0%
GTATTCATCAATAAGAACAG+TGG + Chr5:101536336-101536355 None:intergenic 30.0%
TCCTGTAAAAGGGAAAAAAA+AGG + Chr5:101536966-101536985 None:intergenic 30.0%
! ATTTAGTACGACGAATTTTC+AGG - Chr5:101536594-101536613 MsG0580029751.01.T01:intron 30.0%
! CATTTTCTTCATATCACAAG+AGG - Chr5:101537419-101537438 MsG0580029751.01.T01:CDS 30.0%
! TTTAGTACGACGAATTTTCA+GGG - Chr5:101536595-101536614 MsG0580029751.01.T01:intron 30.0%
! TTTGTGCATGTTTGAAATCA+CGG - Chr5:101535830-101535849 MsG0580029751.01.T01:intron 30.0%
! TTTTTGATGCTTCAAAGTGT+TGG - Chr5:101535878-101535897 MsG0580029751.01.T01:intron 30.0%
!! AGAATACACCATTCTGAAAT+TGG - Chr5:101536850-101536869 MsG0580029751.01.T01:intron 30.0%
!! TAATTATTGCTTTTGTTCCC+TGG + Chr5:101536093-101536112 None:intergenic 30.0%
!!! TATTTAGCCACATTGGTTTT+AGG + Chr5:101536643-101536662 None:intergenic 30.0%
AACCAGAGATCAAAAGAGTA+TGG - Chr5:101536037-101536056 MsG0580029751.01.T01:CDS 35.0%
AATCACCCTAAGTTCAAGAT+TGG - Chr5:101535623-101535642 MsG0580029751.01.T01:intron 35.0%
ACCAATGTGGCTAAATATGA+AGG - Chr5:101536646-101536665 MsG0580029751.01.T01:intron 35.0%
ACCACTCAATTCCTGTAAAA+GGG + Chr5:101536976-101536995 None:intergenic 35.0%
ACCTTCATATTTAGCCACAT+TGG + Chr5:101536650-101536669 None:intergenic 35.0%
ATACTCCTCAATATTGCTCT+TGG - Chr5:101536352-101536371 MsG0580029751.01.T01:intron 35.0%
ATCACCCTAAGTTCAAGATT+GGG - Chr5:101535624-101535643 MsG0580029751.01.T01:intron 35.0%
ATGTCGCTCTTTGCAATTTA+TGG - Chr5:101537272-101537291 MsG0580029751.01.T01:intron 35.0%
CAACCAATGACTAAAATGCA+AGG - Chr5:101536742-101536761 MsG0580029751.01.T01:intron 35.0%
CATATCCAAGAGCAATATTG+AGG + Chr5:101536360-101536379 None:intergenic 35.0%
CCAAGCAAACAGAATATACA+AGG - Chr5:101536805-101536824 MsG0580029751.01.T01:intron 35.0%
CCTTGTATATTCTGTTTGCT+TGG + Chr5:101536808-101536827 None:intergenic 35.0%
CTCAATATTGCTCTTGGATA+TGG - Chr5:101536358-101536377 MsG0580029751.01.T01:intron 35.0%
GCTAATCACCAATTTCAGAA+TGG + Chr5:101536861-101536880 None:intergenic 35.0%
TAAATGGATAACGCAGAATG+TGG + Chr5:101535280-101535299 None:intergenic 35.0%
TGATCCATTTCAGAAAACCA+GGG - Chr5:101536073-101536092 MsG0580029751.01.T01:CDS 35.0%
TTGAATGTAATCGCATGTGT+CGG + Chr5:101537183-101537202 None:intergenic 35.0%
TTGATCCATTTCAGAAAACC+AGG - Chr5:101536072-101536091 MsG0580029751.01.T01:CDS 35.0%
TTTGACAGATTGTCGATCAA+AGG - Chr5:101537349-101537368 MsG0580029751.01.T01:intron 35.0%
! ACATTGACACTTTTGATGCA+AGG - Chr5:101537122-101537141 MsG0580029751.01.T01:intron 35.0%
!! CTTCCTTTGGTCATTTTATG+AGG - Chr5:101536286-101536305 MsG0580029751.01.T01:intron 35.0%
!! CTTGCATTTTAGTCATTGGT+TGG + Chr5:101536744-101536763 None:intergenic 35.0%
!! TAGCCTTGCATTTTAGTCAT+TGG + Chr5:101536748-101536767 None:intergenic 35.0%
!!! CCCTTTTTTTTCCCTTTTAC+AGG - Chr5:101536962-101536981 MsG0580029751.01.T01:intron 35.0%
AATTGAGTGGTCACCAAGAA+TGG - Chr5:101536985-101537004 MsG0580029751.01.T01:intron 40.0%
ACAGTGCATGTTTGAATTGG+TGG + Chr5:101535933-101535952 None:intergenic 40.0%
ACTACCACTGCAATTCTGAT+AGG + Chr5:101536208-101536227 None:intergenic 40.0%
AGATTACCATAGGCAGAAGA+TGG + Chr5:101535419-101535438 None:intergenic 40.0%
ATGGACCATATGAGGTTGTT+TGG - Chr5:101537452-101537471 MsG0580029751.01.T01:exon 40.0%
CATGGCTCTCTTGCATAATT+AGG + Chr5:101536673-101536692 None:intergenic 40.0%
CCACGTTAACTAGCTAGAAA+TGG - Chr5:101535320-101535339 MsG0580029751.01.T01:CDS 40.0%
CTACCACTGCAATTCTGATA+GGG + Chr5:101536207-101536226 None:intergenic 40.0%
CTGCCTCATAAAATGACCAA+AGG + Chr5:101536292-101536311 None:intergenic 40.0%
GAATTTGGATTGCATGCAGT+TGG + Chr5:101536522-101536541 None:intergenic 40.0%
GACCACTCAATTCCTGTAAA+AGG + Chr5:101536977-101536996 None:intergenic 40.0%
GAGACAGTGCATGTTTGAAT+TGG + Chr5:101535936-101535955 None:intergenic 40.0%
GATACTGTATGGACCATATG+AGG - Chr5:101537444-101537463 MsG0580029751.01.T01:exon 40.0%
GATTACCATAGGCAGAAGAT+GGG + Chr5:101535418-101535437 None:intergenic 40.0%
GATTCTGCAACATCCATTCT+TGG + Chr5:101537001-101537020 None:intergenic 40.0%
GCTAGAAATGGAGAATGAGT+TGG - Chr5:101535332-101535351 MsG0580029751.01.T01:CDS 40.0%
GCTTAGGAGATGTGACAATA+AGG - Chr5:101536239-101536258 MsG0580029751.01.T01:intron 40.0%
GGTAGATGAAATCTCATCAC+TGG + Chr5:101535397-101535416 None:intergenic 40.0%
GTTATCATGGTAGAAGTTCC+TGG - Chr5:101537034-101537053 MsG0580029751.01.T01:intron 40.0%
TGTTGCTCCTAAAACCAATG+TGG - Chr5:101536633-101536652 MsG0580029751.01.T01:intron 40.0%
TTGCTTGGCCTAGAAAATGA+AGG + Chr5:101536793-101536812 None:intergenic 40.0%
TTTGGTCCCTGGTTTCTAAT+AGG + Chr5:101536117-101536136 None:intergenic 40.0%
! ACGATTGATTCTTTCCTTGC+AGG + Chr5:101536706-101536725 None:intergenic 40.0%
! CTCCATACTCTTTTGATCTC+TGG + Chr5:101536042-101536061 None:intergenic 40.0%
! TCCCTTTTACAGGAATTGAG+TGG - Chr5:101536972-101536991 MsG0580029751.01.T01:intron 40.0%
! TGCATGTTTGAAATCACGGT+GGG - Chr5:101535834-101535853 MsG0580029751.01.T01:intron 40.0%
! TTGAGCCACCTTCATTTTCT+AGG - Chr5:101536782-101536801 MsG0580029751.01.T01:intron 40.0%
!! CCATTTCTAGCTAGTTAACG+TGG + Chr5:101535323-101535342 None:intergenic 40.0%
!! GTTTGAATTGGTGGTGTGTT+TGG + Chr5:101535924-101535943 None:intergenic 40.0%
!! TGTTCCCTGGTTTTCTGAAA+TGG + Chr5:101536080-101536099 None:intergenic 40.0%
!!! ATTGGTTTTAGGAGCAACAG+AGG + Chr5:101536632-101536651 None:intergenic 40.0%
!!! TAACAATTGGTTTTGGTCCC+TGG + Chr5:101536128-101536147 None:intergenic 40.0%
ACATTGTCCTTGTTCACACG+AGG + Chr5:101537487-101537506 None:intergenic 45.0%
ACTGCAATTCTGATAGGGAG+AGG + Chr5:101536202-101536221 None:intergenic 45.0%
AGTGGCCAAACAACCTCATA+TGG + Chr5:101537460-101537479 None:intergenic 45.0%
ATCTACCCATCTTCTGCCTA+TGG - Chr5:101535410-101535429 MsG0580029751.01.T01:CDS 45.0%
CACAAGAGGGAGATACTGTA+TGG - Chr5:101537433-101537452 MsG0580029751.01.T01:CDS 45.0%
CTCATCACTGGAAGCAAAGT+GGG + Chr5:101535385-101535404 None:intergenic 45.0%
CTTGCAGGTCTTGCAAAACA+TGG + Chr5:101536691-101536710 None:intergenic 45.0%
CTTGGCCTAGAAAATGAAGG+TGG + Chr5:101536790-101536809 None:intergenic 45.0%
GTAGTCTGAACTCTGTGCTT+AGG - Chr5:101536223-101536242 MsG0580029751.01.T01:intron 45.0%
TCATGGAGTCAGAACATCAG+TGG + Chr5:101536488-101536507 None:intergenic 45.0%
TCTCATCACTGGAAGCAAAG+TGG + Chr5:101535386-101535405 None:intergenic 45.0%
TCTCCCTATCAGAATTGCAG+TGG - Chr5:101536201-101536220 MsG0580029751.01.T01:intron 45.0%
! ACTAGTTCTTGGAGAGAAGC+AGG - Chr5:101537382-101537401 MsG0580029751.01.T01:CDS 45.0%
! CATGTTTTGCAAGACCTGCA+AGG - Chr5:101536689-101536708 MsG0580029751.01.T01:intron 45.0%
! GTAGACGCTCTACTAGTTCT+TGG - Chr5:101537371-101537390 MsG0580029751.01.T01:CDS 45.0%
! GTGCATGTTTGAAATCACGG+TGG - Chr5:101535833-101535852 MsG0580029751.01.T01:intron 45.0%
! GTTTGAAATCACGGTGGGTT+TGG - Chr5:101535839-101535858 MsG0580029751.01.T01:intron 45.0%
! TCTTGTGTCGATGTTGTGTC+TGG - Chr5:101537227-101537246 MsG0580029751.01.T01:intron 45.0%
! TGTGTCTGGAGTTGGTCTAT+GGG - Chr5:101537241-101537260 MsG0580029751.01.T01:intron 45.0%
! TTGTGTCTGGAGTTGGTCTA+TGG - Chr5:101537240-101537259 MsG0580029751.01.T01:intron 45.0%
!! AGTACGACGAATTTTCAGGG+TGG - Chr5:101536598-101536617 MsG0580029751.01.T01:intron 45.0%
!! TAATAATATTCAATAAAATA+AGG - Chr5:101535770-101535789 MsG0580029751.01.T01:CDS 5.0%
ACTTCCTCCTCGTGTGAACA+AGG - Chr5:101537477-101537496 MsG0580029751.01.T01:five_prime_UTR 50.0%
CAGTGTGGGTGACATAAGAG+TGG - Chr5:101537060-101537079 MsG0580029751.01.T01:intron 50.0%
CATGCAGTCAGGAGCAAGAT+CGG - Chr5:101536409-101536428 MsG0580029751.01.T01:intron 50.0%
GACCAAAGGAAGCAGATGCT+TGG + Chr5:101536278-101536297 None:intergenic 50.0%
TGCAAGGCTTGTCTAGTGTC+TGG - Chr5:101537138-101537157 MsG0580029751.01.T01:intron 50.0%
TGTGGGTGACATAAGAGTGG+AGG - Chr5:101537063-101537082 MsG0580029751.01.T01:intron 50.0%
TTGTCCTTGTTCACACGAGG+AGG + Chr5:101537484-101537503 None:intergenic 50.0%
TTGTCTAGTGTCTGGCACGT+GGG - Chr5:101537146-101537165 MsG0580029751.01.T01:intron 50.0%
TTGTTCACACGAGGAGGAAG+TGG + Chr5:101537478-101537497 None:intergenic 50.0%
! ACGGTGGGTTTGGCAAAATC+AGG - Chr5:101535849-101535868 MsG0580029751.01.T01:intron 50.0%
! AGAAGTTCCTGGTGTCAGTG+TGG - Chr5:101537045-101537064 MsG0580029751.01.T01:intron 50.0%
! CGGTGGGTTTGGCAAAATCA+GGG - Chr5:101535850-101535869 MsG0580029751.01.T01:intron 50.0%
! GAAGTTCCTGGTGTCAGTGT+GGG - Chr5:101537046-101537065 MsG0580029751.01.T01:intron 50.0%
! GTAATCGCATGTGTCGGTGT+CGG + Chr5:101537177-101537196 None:intergenic 50.0%
! GTCGATGTTGTGTCTGGAGT+TGG - Chr5:101537233-101537252 MsG0580029751.01.T01:intron 50.0%
ATGTCACCCACACTGACACC+AGG + Chr5:101537055-101537074 None:intergenic 55.0%
CAGTCAGGAGCAAGATCGGA+TGG - Chr5:101536413-101536432 MsG0580029751.01.T01:intron 55.0%
CGCCAAGCATCTGCTTCCTT+TGG - Chr5:101536273-101536292 MsG0580029751.01.T01:intron 55.0%
CTTGTCTAGTGTCTGGCACG+TGG - Chr5:101537145-101537164 MsG0580029751.01.T01:intron 55.0%
GAGGCAGACATCAGCTGAAG+AGG - Chr5:101536305-101536324 MsG0580029751.01.T01:intron 55.0%
TGTCTAGTGTCTGGCACGTG+GGG - Chr5:101537147-101537166 MsG0580029751.01.T01:intron 55.0%
GTCTAGTGTCTGGCACGTGG+GGG - Chr5:101537148-101537167 MsG0580029751.01.T01:intron 60.0%
TCTCGCGCAGTCATGCAGTC+AGG - Chr5:101536398-101536417 MsG0580029751.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr5 gene 101535276 101537525 101535276 ID=MsG0580029751.01;Name=MsG0580029751.01
Chr5 mRNA 101535276 101537525 101535276 ID=MsG0580029751.01.T01;Parent=MsG0580029751.01;Name=MsG0580029751.01.T01;_AED=0.46;_eAED=0.46;_QI=63|1|0.8|1|0.5|0.8|5|0|248
Chr5 exon 101535276 101535444 101535276 ID=MsG0580029751.01.T01:exon:8759;Parent=MsG0580029751.01.T01
Chr5 exon 101535703 101535817 101535703 ID=MsG0580029751.01.T01:exon:8758;Parent=MsG0580029751.01.T01
Chr5 exon 101535930 101536185 101535930 ID=MsG0580029751.01.T01:exon:8757;Parent=MsG0580029751.01.T01
Chr5 exon 101536475 101536588 101536475 ID=MsG0580029751.01.T01:exon:8756;Parent=MsG0580029751.01.T01
Chr5 exon 101537370 101537525 101537370 ID=MsG0580029751.01.T01:exon:8755;Parent=MsG0580029751.01.T01
Chr5 five_prime_UTR 101537463 101537525 101537463 ID=MsG0580029751.01.T01:five_prime_utr;Parent=MsG0580029751.01.T01
Chr5 CDS 101537370 101537462 101537370 ID=MsG0580029751.01.T01:cds;Parent=MsG0580029751.01.T01
Chr5 CDS 101536475 101536588 101536475 ID=MsG0580029751.01.T01:cds;Parent=MsG0580029751.01.T01
Chr5 CDS 101535930 101536185 101535930 ID=MsG0580029751.01.T01:cds;Parent=MsG0580029751.01.T01
Chr5 CDS 101535703 101535817 101535703 ID=MsG0580029751.01.T01:cds;Parent=MsG0580029751.01.T01
Chr5 CDS 101535276 101535444 101535276 ID=MsG0580029751.01.T01:cds;Parent=MsG0580029751.01.T01
Gene Sequence

>MsG0580029751.01.T01

ATGGAGAATGAGTTGGTGAAACGCAGAATTGATACTATTGCAGCCCACTTTGCTTCCAGTGATGAGATTTCATCTACCCATCTTCTGCCTATGAATTGCAGTGGTAGTCTGAACTCTGTGCTTAGGAGATGTGACAATAAGGTATATTTCGCACGCCAAGCATCTGCTTCCTTTGGTCATTTTATGAGGCAGACATCAGCTGAAGAGGGTGGCTTAACATCCTCTGTTGCTCCTAAAACCAATGTGGCTAAATATGAAGGTCCTAATTATGCAAGAGAGCCATGTTTTGCAAGACCTGCAAGGAAAGAATCAATCGTTTCAAATTCAGTTGTCCAACCAATGACTAAAATGCAAGGCTATAATTTTGATTCACTTGAGCCACCTTCATTTTCTAGGCCAAGCAAACAGAATATACAAGGAGAACAGCTAAATAATGAGAAAAGAATACACCATTCTGAAATTGGAATTGAGTGGTCACCAAGAATGGATGTTGCAGAATCAGAAAGTAAATATGTTATCATGGTAGAAGTTCCTGGTGTCAGTGTGGGTGACATAAGAGTGGAGGTTGATGATCAAAAATTGTCGATCAAAGGTAGACGCTCTACTAGTTCTTGGAGAGAAGCAGGTTGTCCAAATGCTTCATTTTCTTCATATCACAAGAGGGAGATACTGTATGGACCATATGAGGTTGTTTGGCCACTTCCTCCTCGTGTGAACAAGGACAATGTATCAGCTGAATTTTTGTAA

Protein sequence

>MsG0580029751.01.T01

MENELVKRRIDTIAAHFASSDEISSTHLLPMNCSGSLNSVLRRCDNKVYFARQASASFGHFMRQTSAEEGGLTSSVAPKTNVAKYEGPNYAREPCFARPARKESIVSNSVVQPMTKMQGYNFDSLEPPSFSRPSKQNIQGEQLNNEKRIHHSEIGIEWSPRMDVAESESKYVIMVEVPGVSVGDIRVEVDDQKLSIKGRRSTSSWREAGCPNASFSSYHKREILYGPYEVVWPLPPRVNKDNVSAEFL*