Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680033852.01.T01 | AGR40686.1 | 92.5 | 200 | 13 | 2 | 1 | 200 | 1 | 198 | 4.88E-121 | 351 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680033852.01.T01 | Q9SYS6 | 56.281 | 199 | 69 | 5 | 10 | 200 | 28 | 216 | 2.62E-68 | 211 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680033852.01.T01 | S5LVT8 | 92.500 | 200 | 13 | 2 | 1 | 200 | 1 | 198 | 2.33e-121 | 351 |
Gene ID | Type | Classification |
---|---|---|
MsG0680033852.01.T01 | TF | AP2/ERF-ERF |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0180001548.01 | MsG0680033852.01 | 0.845698 | 3.452103e-59 | 5.801988e-56 |
MsG0180003196.01 | MsG0680033852.01 | 0.831125 | 1.992447e-55 | 2.142168e-52 |
MsG0180004792.01 | MsG0680033852.01 | 0.841981 | 3.416027e-58 | 5.105513e-55 |
MsG0180006028.01 | MsG0680033852.01 | 0.823164 | 1.604878e-53 | 1.371213e-50 |
MsG0280011218.01 | MsG0680033852.01 | 0.809798 | 1.583227e-50 | 9.385220e-48 |
MsG0280011362.01 | MsG0680033852.01 | 0.809137 | 2.195693e-50 | 1.278879e-47 |
MsG0680033852.01 | MsG0680033879.01 | 0.923199 | 3.639225e-89 | 1.435227e-84 |
MsG0680033852.01 | MsG0680033884.01 | 0.847283 | 1.275467e-59 | 2.255664e-56 |
MsG0680033852.01 | MsG0780040105.01 | 0.843967 | 1.011522e-58 | 1.609113e-55 |
MsG0680033852.01 | MsG0880042415.01 | 0.817688 | 2.896117e-52 | 2.123610e-49 |
MsG0680033852.01 | MsG0880043056.01 | 0.804504 | 2.092483e-49 | 1.080683e-46 |
MsG0680033852.01 | MsG0880045312.01 | 0.805407 | 1.355172e-49 | 7.163926e-47 |
MsG0480019812.01 | MsG0680033852.01 | 0.846224 | 2.484093e-59 | 4.245705e-56 |
MsG0480020596.01 | MsG0680033852.01 | 0.804426 | 2.172199e-49 | 1.119604e-46 |
MsG0480021124.01 | MsG0680033852.01 | 0.811620 | 6.390690e-51 | 3.974810e-48 |
MsG0480021213.01 | MsG0680033852.01 | 0.807975 | 3.886141e-50 | 2.195077e-47 |
MsG0480022154.01 | MsG0680033852.01 | 0.835190 | 1.938607e-56 | 2.353047e-53 |
MsG0480022240.01 | MsG0680033852.01 | 0.836998 | 6.736847e-57 | 8.634385e-54 |
MsG0580024872.01 | MsG0680033852.01 | 0.808641 | 2.802561e-50 | 1.610892e-47 |
MsG0580025280.01 | MsG0680033852.01 | 0.809501 | 1.834119e-50 | 1.078665e-47 |
MsG0480018337.01 | MsG0680033852.01 | 0.805563 | 1.256833e-49 | 6.670456e-47 |
MsG0280009675.01 | MsG0680033852.01 | 0.809802 | 1.580674e-50 | 9.370851e-48 |
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680033852.01.T01 | MTR_6g465530 | 91.000 | 200 | 16 | 2 | 1 | 200 | 1 | 198 | 1.55e-117 | 332 |
MsG0680033852.01.T01 | MTR_6g465510 | 87.081 | 209 | 17 | 2 | 1 | 200 | 1 | 208 | 8.01e-112 | 318 |
MsG0680033852.01.T01 | MTR_6g465420 | 76.684 | 193 | 38 | 3 | 3 | 194 | 24 | 210 | 1.32e-103 | 299 |
MsG0680033852.01.T01 | MTR_6g465460 | 77.895 | 190 | 32 | 3 | 7 | 194 | 28 | 209 | 2.93e-102 | 296 |
MsG0680033852.01.T01 | MTR_6g465450 | 78.974 | 195 | 33 | 3 | 2 | 194 | 23 | 211 | 4.13e-101 | 292 |
MsG0680033852.01.T01 | MTR_6g465430 | 77.320 | 194 | 35 | 3 | 3 | 194 | 24 | 210 | 1.32e-97 | 283 |
MsG0680033852.01.T01 | MTR_6g465690 | 75.000 | 188 | 39 | 2 | 5 | 191 | 35 | 215 | 2.71e-94 | 275 |
MsG0680033852.01.T01 | MTR_6g466000 | 69.458 | 203 | 49 | 2 | 6 | 200 | 30 | 227 | 2.77e-94 | 274 |
MsG0680033852.01.T01 | MTR_6g466130 | 72.000 | 200 | 50 | 3 | 1 | 200 | 35 | 228 | 3.89e-91 | 266 |
MsG0680033852.01.T01 | MTR_6g465850 | 55.102 | 245 | 61 | 2 | 5 | 200 | 35 | 279 | 1.30e-73 | 224 |
MsG0680033852.01.T01 | MTR_1g101600 | 59.701 | 201 | 65 | 4 | 4 | 200 | 12 | 200 | 8.01e-69 | 209 |
MsG0680033852.01.T01 | MTR_6g465990 | 58.621 | 203 | 51 | 3 | 6 | 200 | 16 | 193 | 2.20e-66 | 202 |
MsG0680033852.01.T01 | MTR_6g466020 | 57.672 | 189 | 51 | 3 | 10 | 197 | 20 | 180 | 1.43e-60 | 187 |
MsG0680033852.01.T01 | MTR_5g010930 | 48.095 | 210 | 77 | 7 | 11 | 200 | 27 | 224 | 3.60e-52 | 167 |
MsG0680033852.01.T01 | MTR_5g010940 | 46.635 | 208 | 95 | 5 | 4 | 200 | 25 | 227 | 1.29e-50 | 163 |
MsG0680033852.01.T01 | MTR_5g010910 | 47.959 | 196 | 86 | 5 | 16 | 200 | 32 | 222 | 1.53e-49 | 160 |
MsG0680033852.01.T01 | MTR_4g102660 | 52.113 | 213 | 79 | 9 | 3 | 200 | 14 | 218 | 2.49e-48 | 157 |
MsG0680033852.01.T01 | MTR_3g110205 | 57.895 | 95 | 40 | 0 | 28 | 122 | 38 | 132 | 3.86e-32 | 115 |
MsG0680033852.01.T01 | MTR_8g006410 | 65.000 | 80 | 28 | 0 | 28 | 107 | 47 | 126 | 6.23e-32 | 115 |
MsG0680033852.01.T01 | MTR_7g117690 | 60.227 | 88 | 35 | 0 | 20 | 107 | 15 | 102 | 3.94e-31 | 112 |
MsG0680033852.01.T01 | MTR_7g046260 | 62.963 | 81 | 30 | 0 | 27 | 107 | 55 | 135 | 1.78e-30 | 112 |
MsG0680033852.01.T01 | MTR_2g101340 | 55.446 | 101 | 39 | 2 | 13 | 107 | 15 | 115 | 2.21e-30 | 111 |
MsG0680033852.01.T01 | MTR_8g013860 | 63.291 | 79 | 29 | 0 | 29 | 107 | 43 | 121 | 3.43e-30 | 110 |
MsG0680033852.01.T01 | MTR_2g085015 | 39.759 | 166 | 80 | 5 | 27 | 174 | 41 | 204 | 5.36e-30 | 110 |
MsG0680033852.01.T01 | MTR_8g102800 | 56.566 | 99 | 43 | 0 | 23 | 121 | 27 | 125 | 1.31e-29 | 109 |
MsG0680033852.01.T01 | MTR_5g012910 | 62.025 | 79 | 30 | 0 | 29 | 107 | 24 | 102 | 2.06e-29 | 107 |
MsG0680033852.01.T01 | MTR_6g088405 | 62.821 | 78 | 29 | 0 | 30 | 107 | 41 | 118 | 5.10e-29 | 107 |
MsG0680033852.01.T01 | MTR_8g027465 | 56.383 | 94 | 38 | 1 | 17 | 107 | 23 | 116 | 1.73e-28 | 105 |
MsG0680033852.01.T01 | MTR_4g100650 | 60.256 | 78 | 31 | 0 | 30 | 107 | 71 | 148 | 2.04e-25 | 99.4 |
MsG0680033852.01.T01 | MTR_4g102670 | 55.696 | 79 | 34 | 1 | 29 | 107 | 11 | 88 | 8.57e-25 | 95.5 |
MsG0680033852.01.T01 | MTR_6g088425 | 61.628 | 86 | 33 | 0 | 29 | 114 | 45 | 130 | 3.99e-24 | 95.5 |
MsG0680033852.01.T01 | MTR_4g035430 | 54.217 | 83 | 38 | 0 | 32 | 114 | 31 | 113 | 9.31e-24 | 94.4 |
MsG0680033852.01.T01 | MTR_5g008590 | 36.932 | 176 | 102 | 3 | 33 | 199 | 11 | 186 | 4.34e-22 | 89.0 |
MsG0680033852.01.T01 | MTR_1g006660 | 56.522 | 92 | 36 | 1 | 20 | 107 | 30 | 121 | 1.30e-21 | 89.4 |
MsG0680033852.01.T01 | MTR_5g008550 | 35.915 | 142 | 86 | 2 | 33 | 169 | 21 | 162 | 4.29e-20 | 84.0 |
MsG0680033852.01.T01 | MTR_2g435590 | 52.000 | 75 | 33 | 1 | 17 | 91 | 83 | 154 | 6.41e-18 | 79.7 |
MsG0680033852.01.T01 | MTR_8g090350 | 45.161 | 93 | 46 | 2 | 17 | 104 | 95 | 187 | 9.17e-18 | 79.7 |
MsG0680033852.01.T01 | MTR_1g060910 | 36.416 | 173 | 70 | 8 | 17 | 174 | 3 | 150 | 1.15e-17 | 77.0 |
MsG0680033852.01.T01 | MTR_5g008470 | 45.238 | 84 | 46 | 0 | 35 | 118 | 77 | 160 | 1.43e-17 | 77.0 |
MsG0680033852.01.T01 | MTR_3g102100 | 52.113 | 71 | 33 | 1 | 18 | 88 | 31 | 100 | 1.62e-17 | 76.6 |
MsG0680033852.01.T01 | MTR_1g014780 | 56.667 | 60 | 26 | 0 | 32 | 91 | 37 | 96 | 1.67e-17 | 77.8 |
MsG0680033852.01.T01 | MTR_2g043030 | 29.255 | 188 | 111 | 4 | 32 | 200 | 18 | 202 | 4.37e-17 | 76.3 |
MsG0680033852.01.T01 | MTR_3g105510 | 44.706 | 85 | 47 | 0 | 33 | 117 | 37 | 121 | 9.30e-17 | 76.3 |
MsG0680033852.01.T01 | MTR_1g014820 | 42.391 | 92 | 49 | 1 | 32 | 119 | 26 | 117 | 1.05e-16 | 76.3 |
MsG0680033852.01.T01 | MTR_7g021010 | 54.412 | 68 | 30 | 1 | 26 | 92 | 4 | 71 | 1.07e-16 | 73.6 |
MsG0680033852.01.T01 | MTR_1g101550 | 42.254 | 142 | 76 | 4 | 33 | 170 | 57 | 196 | 1.27e-16 | 75.5 |
MsG0680033852.01.T01 | MTR_7g020980 | 48.101 | 79 | 39 | 1 | 14 | 92 | 34 | 110 | 1.61e-16 | 73.9 |
MsG0680033852.01.T01 | MTR_1g019110 | 37.374 | 99 | 59 | 1 | 33 | 131 | 44 | 139 | 1.88e-16 | 73.9 |
MsG0680033852.01.T01 | MTR_4g086220 | 62.500 | 56 | 21 | 0 | 33 | 88 | 96 | 151 | 2.17e-16 | 75.1 |
MsG0680033852.01.T01 | MTR_3g074130 | 59.322 | 59 | 24 | 0 | 32 | 90 | 149 | 207 | 2.64e-16 | 76.3 |
MsG0680033852.01.T01 | MTR_7g021010 | 43.373 | 83 | 47 | 0 | 29 | 111 | 47 | 129 | 2.69e-16 | 73.6 |
MsG0680033852.01.T01 | MTR_5g062700 | 59.322 | 59 | 24 | 0 | 32 | 90 | 172 | 230 | 2.78e-16 | 76.3 |
MsG0680033852.01.T01 | MTR_2g105380 | 51.471 | 68 | 33 | 0 | 21 | 88 | 105 | 172 | 2.84e-16 | 76.3 |
MsG0680033852.01.T01 | MTR_2g043050 | 45.882 | 85 | 46 | 0 | 32 | 116 | 18 | 102 | 2.91e-16 | 74.3 |
MsG0680033852.01.T01 | MTR_1g087920 | 45.652 | 92 | 48 | 1 | 11 | 100 | 53 | 144 | 2.96e-16 | 75.5 |
MsG0680033852.01.T01 | MTR_1g028560 | 59.649 | 57 | 23 | 0 | 33 | 89 | 115 | 171 | 3.83e-16 | 75.9 |
MsG0680033852.01.T01 | MTR_5g082950 | 64.286 | 56 | 20 | 0 | 33 | 88 | 66 | 121 | 4.08e-16 | 75.5 |
MsG0680033852.01.T01 | MTR_1g090170 | 55.556 | 63 | 28 | 0 | 28 | 90 | 147 | 209 | 4.11e-16 | 75.5 |
MsG0680033852.01.T01 | MTR_1g014860 | 51.562 | 64 | 31 | 0 | 28 | 91 | 17 | 80 | 4.78e-16 | 73.9 |
MsG0680033852.01.T01 | MTR_5g083340 | 60.345 | 58 | 23 | 0 | 33 | 90 | 85 | 142 | 5.23e-16 | 75.9 |
MsG0680033852.01.T01 | MTR_2g090235 | 59.322 | 59 | 24 | 0 | 32 | 90 | 217 | 275 | 5.51e-16 | 75.9 |
MsG0680033852.01.T01 | MTR_8g092460 | 56.667 | 60 | 26 | 0 | 33 | 92 | 145 | 204 | 5.56e-16 | 75.1 |
MsG0680033852.01.T01 | MTR_1g090170 | 55.556 | 63 | 28 | 0 | 28 | 90 | 234 | 296 | 6.33e-16 | 75.5 |
MsG0680033852.01.T01 | MTR_4g086160 | 60.714 | 56 | 22 | 0 | 33 | 88 | 96 | 151 | 9.07e-16 | 73.2 |
MsG0680033852.01.T01 | MTR_5g016750 | 57.143 | 56 | 24 | 0 | 33 | 88 | 25 | 80 | 1.03e-15 | 72.0 |
MsG0680033852.01.T01 | MTR_2g089170 | 36.154 | 130 | 67 | 4 | 33 | 158 | 65 | 182 | 1.03e-15 | 72.4 |
MsG0680033852.01.T01 | MTR_3g053690 | 59.375 | 64 | 23 | 1 | 25 | 88 | 22 | 82 | 1.24e-15 | 72.8 |
MsG0680033852.01.T01 | MTR_4g086190 | 60.714 | 56 | 22 | 0 | 33 | 88 | 96 | 151 | 1.27e-15 | 72.8 |
MsG0680033852.01.T01 | MTR_1g014800 | 53.333 | 60 | 28 | 0 | 32 | 91 | 30 | 89 | 1.59e-15 | 72.4 |
MsG0680033852.01.T01 | MTR_4g086165 | 60.714 | 56 | 22 | 0 | 33 | 88 | 82 | 137 | 1.79e-15 | 72.0 |
MsG0680033852.01.T01 | MTR_2g078680 | 60.714 | 56 | 22 | 0 | 33 | 88 | 31 | 86 | 2.13e-15 | 71.6 |
MsG0680033852.01.T01 | MTR_4g114570 | 52.113 | 71 | 27 | 1 | 33 | 103 | 7 | 70 | 2.48e-15 | 71.6 |
MsG0680033852.01.T01 | MTR_7g092190 | 62.500 | 56 | 21 | 0 | 33 | 88 | 30 | 85 | 2.84e-15 | 72.8 |
MsG0680033852.01.T01 | MTR_3g105480 | 44.578 | 83 | 46 | 0 | 35 | 117 | 33 | 115 | 3.49e-15 | 71.6 |
MsG0680033852.01.T01 | MTR_5g009620 | 44.565 | 92 | 45 | 1 | 3 | 88 | 76 | 167 | 5.98e-15 | 72.0 |
MsG0680033852.01.T01 | MTR_1g074310 | 54.839 | 62 | 27 | 1 | 33 | 93 | 21 | 82 | 6.25e-15 | 69.3 |
MsG0680033852.01.T01 | MTR_4g078710 | 36.893 | 103 | 59 | 1 | 33 | 135 | 28 | 124 | 6.67e-15 | 70.9 |
MsG0680033852.01.T01 | MTR_2g438180 | 58.065 | 62 | 25 | 1 | 33 | 93 | 14 | 75 | 8.14e-15 | 68.6 |
MsG0680033852.01.T01 | MTR_8g022820 | 51.515 | 66 | 32 | 0 | 23 | 88 | 114 | 179 | 8.83e-15 | 72.0 |
MsG0680033852.01.T01 | MTR_8g022820 | 51.515 | 66 | 32 | 0 | 23 | 88 | 114 | 179 | 8.83e-15 | 72.0 |
MsG0680033852.01.T01 | MTR_8g022820 | 51.515 | 66 | 32 | 0 | 23 | 88 | 113 | 178 | 9.14e-15 | 72.0 |
MsG0680033852.01.T01 | MTR_7g028925 | 55.000 | 60 | 24 | 1 | 32 | 91 | 28 | 84 | 9.20e-15 | 67.4 |
MsG0680033852.01.T01 | MTR_0939s0010 | 58.929 | 56 | 23 | 0 | 33 | 88 | 65 | 120 | 1.09e-14 | 69.7 |
MsG0680033852.01.T01 | MTR_5g083330 | 50.685 | 73 | 36 | 0 | 18 | 90 | 20 | 92 | 1.34e-14 | 70.9 |
MsG0680033852.01.T01 | MTR_2g015050 | 52.174 | 69 | 32 | 1 | 21 | 88 | 122 | 190 | 1.55e-14 | 70.5 |
MsG0680033852.01.T01 | MTR_4g010640 | 58.929 | 56 | 23 | 0 | 33 | 88 | 7 | 62 | 2.05e-14 | 69.3 |
MsG0680033852.01.T01 | MTR_2g103700 | 55.000 | 60 | 27 | 0 | 33 | 92 | 7 | 66 | 3.37e-14 | 67.8 |
MsG0680033852.01.T01 | MTR_3g072610 | 49.438 | 89 | 41 | 2 | 33 | 117 | 25 | 113 | 4.04e-14 | 68.6 |
MsG0680033852.01.T01 | MTR_2g014340 | 57.143 | 56 | 24 | 0 | 33 | 88 | 19 | 74 | 5.58e-14 | 67.8 |
MsG0680033852.01.T01 | MTR_3g090760 | 32.237 | 152 | 91 | 2 | 17 | 158 | 89 | 238 | 5.93e-14 | 69.7 |
MsG0680033852.01.T01 | MTR_1g048610 | 56.140 | 57 | 24 | 1 | 33 | 88 | 89 | 145 | 7.16e-14 | 68.2 |
MsG0680033852.01.T01 | MTR_3g106290 | 60.714 | 56 | 22 | 0 | 33 | 88 | 8 | 63 | 8.16e-14 | 67.0 |
MsG0680033852.01.T01 | MTR_1g070070 | 56.140 | 57 | 24 | 1 | 33 | 88 | 21 | 77 | 1.24e-13 | 65.9 |
MsG0680033852.01.T01 | MTR_4g100420 | 57.895 | 57 | 23 | 1 | 33 | 88 | 157 | 213 | 1.48e-13 | 68.2 |
MsG0680033852.01.T01 | MTR_4g054740 | 43.023 | 86 | 43 | 2 | 8 | 92 | 77 | 157 | 1.58e-13 | 67.4 |
MsG0680033852.01.T01 | MTR_4g008860 | 60.714 | 56 | 22 | 0 | 33 | 88 | 8 | 63 | 1.76e-13 | 66.2 |
MsG0680033852.01.T01 | MTR_2g043020 | 28.947 | 190 | 110 | 5 | 32 | 200 | 18 | 203 | 1.81e-13 | 66.6 |
MsG0680033852.01.T01 | MTR_2g014300 | 58.929 | 56 | 23 | 0 | 33 | 88 | 15 | 70 | 2.25e-13 | 65.5 |
MsG0680033852.01.T01 | MTR_1g074230 | 57.895 | 57 | 23 | 1 | 33 | 88 | 19 | 75 | 2.70e-13 | 64.7 |
MsG0680033852.01.T01 | MTR_2g043040 | 41.176 | 85 | 50 | 0 | 32 | 116 | 18 | 102 | 3.65e-13 | 66.2 |
MsG0680033852.01.T01 | MTR_2g016730 | 42.857 | 91 | 46 | 2 | 22 | 111 | 11 | 96 | 3.83e-13 | 67.0 |
MsG0680033852.01.T01 | MTR_5g085100 | 47.674 | 86 | 35 | 2 | 13 | 98 | 29 | 104 | 3.88e-13 | 66.6 |
MsG0680033852.01.T01 | MTR_4g054360 | 45.122 | 82 | 39 | 2 | 12 | 92 | 108 | 184 | 3.91e-13 | 66.6 |
MsG0680033852.01.T01 | MTR_4g100450 | 56.140 | 57 | 24 | 1 | 33 | 88 | 154 | 210 | 4.03e-13 | 67.0 |
MsG0680033852.01.T01 | MTR_5g085070 | 53.030 | 66 | 24 | 1 | 33 | 98 | 51 | 109 | 5.22e-13 | 66.2 |
MsG0680033852.01.T01 | MTR_5g075570 | 48.333 | 60 | 31 | 0 | 29 | 88 | 120 | 179 | 1.03e-12 | 65.5 |
MsG0680033852.01.T01 | MTR_5g008540 | 47.541 | 61 | 32 | 0 | 35 | 95 | 26 | 86 | 1.75e-12 | 61.2 |
MsG0680033852.01.T01 | MTR_4g088005 | 47.826 | 69 | 35 | 1 | 21 | 88 | 45 | 113 | 2.26e-12 | 61.6 |
MsG0680033852.01.T01 | MTR_8g099215 | 48.148 | 81 | 33 | 2 | 17 | 88 | 82 | 162 | 2.40e-12 | 64.7 |
MsG0680033852.01.T01 | MTR_8g069360 | 53.571 | 56 | 26 | 0 | 33 | 88 | 44 | 99 | 2.77e-12 | 65.1 |
MsG0680033852.01.T01 | MTR_1g090290 | 51.613 | 62 | 27 | 2 | 28 | 88 | 110 | 169 | 3.08e-12 | 63.2 |
MsG0680033852.01.T01 | MTR_1g074250 | 49.206 | 63 | 30 | 1 | 30 | 90 | 16 | 78 | 3.47e-12 | 61.6 |
MsG0680033852.01.T01 | MTR_4g054860 | 45.783 | 83 | 39 | 3 | 11 | 92 | 114 | 191 | 4.34e-12 | 63.9 |
MsG0680033852.01.T01 | MTR_4g111915 | 47.458 | 59 | 31 | 0 | 33 | 91 | 53 | 111 | 4.71e-12 | 61.2 |
MsG0680033852.01.T01 | MTR_6g029180 | 47.222 | 72 | 37 | 1 | 21 | 92 | 22 | 92 | 1.03e-11 | 62.8 |
MsG0680033852.01.T01 | MTR_7g081815 | 52.632 | 57 | 26 | 1 | 33 | 88 | 61 | 117 | 1.33e-11 | 61.6 |
MsG0680033852.01.T01 | MTR_8g006840 | 52.632 | 57 | 26 | 1 | 33 | 88 | 125 | 181 | 1.34e-11 | 61.2 |
MsG0680033852.01.T01 | MTR_7g081805 | 52.632 | 57 | 26 | 1 | 33 | 88 | 61 | 117 | 1.39e-11 | 61.6 |
MsG0680033852.01.T01 | MTR_6g041970 | 39.535 | 86 | 39 | 1 | 33 | 118 | 18 | 90 | 1.46e-11 | 58.9 |
MsG0680033852.01.T01 | MTR_4g100380 | 56.140 | 57 | 24 | 1 | 33 | 88 | 145 | 201 | 1.62e-11 | 62.0 |
MsG0680033852.01.T01 | MTR_4g112490 | 47.458 | 59 | 31 | 0 | 33 | 91 | 53 | 111 | 1.63e-11 | 61.2 |
MsG0680033852.01.T01 | MTR_5g008790 | 50.000 | 60 | 28 | 1 | 33 | 90 | 18 | 77 | 1.84e-11 | 60.5 |
MsG0680033852.01.T01 | MTR_8g085960 | 35.354 | 99 | 60 | 3 | 33 | 128 | 25 | 122 | 2.13e-11 | 61.2 |
MsG0680033852.01.T01 | MTR_2g015040 | 52.632 | 57 | 26 | 1 | 33 | 88 | 63 | 119 | 2.18e-11 | 60.1 |
MsG0680033852.01.T01 | MTR_5g032820 | 55.357 | 56 | 25 | 0 | 33 | 88 | 46 | 101 | 2.64e-11 | 62.0 |
MsG0680033852.01.T01 | MTR_7g085810 | 50.000 | 60 | 30 | 0 | 33 | 92 | 30 | 89 | 2.86e-11 | 61.2 |
MsG0680033852.01.T01 | MTR_8g006815 | 52.632 | 57 | 26 | 1 | 33 | 88 | 96 | 152 | 2.87e-11 | 60.5 |
MsG0680033852.01.T01 | MTR_8g023700 | 29.560 | 159 | 86 | 2 | 32 | 164 | 116 | 274 | 2.89e-11 | 62.0 |
MsG0680033852.01.T01 | MTR_7g011630 | 45.833 | 72 | 36 | 1 | 17 | 88 | 29 | 97 | 4.28e-11 | 61.6 |
MsG0680033852.01.T01 | MTR_8g032610 | 52.727 | 55 | 26 | 0 | 35 | 89 | 29 | 83 | 5.21e-11 | 60.8 |
MsG0680033852.01.T01 | MTR_7g096750 | 54.386 | 57 | 25 | 1 | 33 | 88 | 20 | 76 | 5.23e-11 | 58.5 |
MsG0680033852.01.T01 | MTR_3g095190 | 54.795 | 73 | 32 | 1 | 33 | 104 | 170 | 242 | 6.00e-11 | 60.8 |
MsG0680033852.01.T01 | MTR_4g119270 | 42.466 | 73 | 40 | 1 | 18 | 88 | 36 | 108 | 6.25e-11 | 60.8 |
MsG0680033852.01.T01 | MTR_6g012970 | 51.786 | 56 | 27 | 0 | 33 | 88 | 38 | 93 | 6.91e-11 | 60.8 |
MsG0680033852.01.T01 | MTR_7g081795 | 50.877 | 57 | 27 | 1 | 33 | 88 | 60 | 116 | 9.54e-11 | 59.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0680033852.01.T01 | AT4G25470 | 56.281 | 199 | 69 | 5 | 10 | 200 | 28 | 216 | 2.67e-69 | 211 |
MsG0680033852.01.T01 | AT4G25480 | 56.281 | 199 | 67 | 4 | 11 | 200 | 29 | 216 | 2.83e-63 | 195 |
MsG0680033852.01.T01 | AT4G25490 | 56.500 | 200 | 65 | 5 | 11 | 200 | 26 | 213 | 5.64e-62 | 192 |
MsG0680033852.01.T01 | AT5G51990 | 51.500 | 200 | 80 | 4 | 10 | 200 | 31 | 222 | 6.02e-61 | 189 |
MsG0680033852.01.T01 | AT1G12610 | 47.826 | 207 | 96 | 4 | 5 | 200 | 2 | 207 | 2.03e-54 | 172 |
MsG0680033852.01.T01 | AT1G63030 | 46.429 | 196 | 87 | 3 | 6 | 200 | 3 | 181 | 6.56e-54 | 170 |
MsG0680033852.01.T01 | AT1G63030 | 46.429 | 196 | 87 | 3 | 6 | 200 | 3 | 181 | 6.56e-54 | 170 |
MsG0680033852.01.T01 | AT5G25810 | 58.511 | 94 | 38 | 1 | 22 | 114 | 24 | 117 | 1.98e-32 | 116 |
MsG0680033852.01.T01 | AT2G35700 | 63.750 | 80 | 29 | 0 | 28 | 107 | 40 | 119 | 3.29e-31 | 112 |
MsG0680033852.01.T01 | AT2G44940 | 39.080 | 174 | 75 | 3 | 22 | 168 | 89 | 258 | 1.61e-30 | 113 |
MsG0680033852.01.T01 | AT4G16750 | 50.000 | 110 | 50 | 1 | 3 | 107 | 5 | 114 | 2.31e-30 | 110 |
MsG0680033852.01.T01 | AT5G11590 | 60.465 | 86 | 34 | 0 | 29 | 114 | 47 | 132 | 2.36e-30 | 112 |
MsG0680033852.01.T01 | AT2G36450 | 41.711 | 187 | 96 | 5 | 21 | 200 | 3 | 183 | 1.92e-29 | 108 |
MsG0680033852.01.T01 | AT4G32800 | 50.467 | 107 | 47 | 1 | 20 | 120 | 6 | 112 | 1.99e-29 | 108 |
MsG0680033852.01.T01 | AT3G16280 | 42.391 | 184 | 82 | 5 | 29 | 200 | 75 | 246 | 2.94e-29 | 109 |
MsG0680033852.01.T01 | AT3G16280 | 42.391 | 184 | 82 | 5 | 29 | 200 | 57 | 228 | 3.28e-29 | 108 |
MsG0680033852.01.T01 | AT1G01250 | 52.830 | 106 | 47 | 1 | 5 | 107 | 14 | 119 | 1.91e-28 | 105 |
MsG0680033852.01.T01 | AT3G60490 | 57.317 | 82 | 34 | 1 | 27 | 107 | 64 | 145 | 3.74e-25 | 99.0 |
MsG0680033852.01.T01 | AT2G25820 | 60.526 | 76 | 30 | 0 | 32 | 107 | 25 | 100 | 5.98e-25 | 97.4 |
MsG0680033852.01.T01 | AT5G52020 | 43.017 | 179 | 87 | 6 | 29 | 200 | 61 | 231 | 1.40e-24 | 96.7 |
MsG0680033852.01.T01 | AT1G71450 | 36.095 | 169 | 98 | 3 | 32 | 199 | 23 | 182 | 1.17e-23 | 93.2 |
MsG0680033852.01.T01 | AT2G47520 | 46.512 | 86 | 43 | 1 | 9 | 91 | 23 | 108 | 2.13e-20 | 84.3 |
MsG0680033852.01.T01 | AT1G21910 | 48.913 | 92 | 40 | 1 | 33 | 117 | 50 | 141 | 3.16e-20 | 85.1 |
MsG0680033852.01.T01 | AT1G33760 | 53.933 | 89 | 41 | 0 | 33 | 121 | 20 | 108 | 3.73e-20 | 84.0 |
MsG0680033852.01.T01 | AT1G77200 | 58.442 | 77 | 32 | 0 | 31 | 107 | 41 | 117 | 9.52e-20 | 84.3 |
MsG0680033852.01.T01 | AT1G46768 | 58.730 | 63 | 25 | 1 | 28 | 90 | 27 | 88 | 7.80e-19 | 79.3 |
MsG0680033852.01.T01 | AT1G46768 | 58.730 | 63 | 25 | 1 | 28 | 90 | 27 | 88 | 8.08e-19 | 79.7 |
MsG0680033852.01.T01 | AT1G46768 | 58.730 | 63 | 25 | 1 | 28 | 90 | 27 | 88 | 8.08e-19 | 79.7 |
MsG0680033852.01.T01 | AT4G13620 | 61.017 | 59 | 23 | 0 | 32 | 90 | 231 | 289 | 1.61e-18 | 82.8 |
MsG0680033852.01.T01 | AT3G16770 | 55.556 | 72 | 28 | 1 | 19 | 90 | 69 | 136 | 7.29e-18 | 79.3 |
MsG0680033852.01.T01 | AT2G22200 | 50.667 | 75 | 35 | 1 | 32 | 104 | 70 | 144 | 8.22e-18 | 79.3 |
MsG0680033852.01.T01 | AT1G22190 | 54.795 | 73 | 31 | 1 | 18 | 90 | 70 | 140 | 8.66e-18 | 79.3 |
MsG0680033852.01.T01 | AT4G06746 | 54.839 | 62 | 28 | 0 | 33 | 94 | 36 | 97 | 1.20e-17 | 76.6 |
MsG0680033852.01.T01 | AT4G39780 | 59.016 | 61 | 25 | 0 | 28 | 88 | 88 | 148 | 1.33e-17 | 79.0 |
MsG0680033852.01.T01 | AT1G12630 | 39.227 | 181 | 98 | 4 | 29 | 200 | 15 | 192 | 2.17e-17 | 77.0 |
MsG0680033852.01.T01 | AT5G21960 | 47.619 | 84 | 44 | 0 | 31 | 114 | 5 | 88 | 3.07e-17 | 77.0 |
MsG0680033852.01.T01 | AT3G50260 | 39.640 | 111 | 55 | 3 | 26 | 136 | 14 | 112 | 3.19e-17 | 75.5 |
MsG0680033852.01.T01 | AT5G65130 | 53.247 | 77 | 34 | 1 | 18 | 92 | 96 | 172 | 3.21e-17 | 78.2 |
MsG0680033852.01.T01 | AT5G65130 | 53.247 | 77 | 34 | 1 | 18 | 92 | 94 | 170 | 3.26e-17 | 77.8 |
MsG0680033852.01.T01 | AT1G74930 | 44.186 | 86 | 48 | 0 | 33 | 118 | 21 | 106 | 3.84e-17 | 76.3 |
MsG0680033852.01.T01 | AT2G23340 | 46.591 | 88 | 41 | 1 | 33 | 114 | 28 | 115 | 3.85e-17 | 75.9 |
MsG0680033852.01.T01 | AT4G36900 | 56.667 | 60 | 26 | 0 | 29 | 88 | 26 | 85 | 6.33e-17 | 75.9 |
MsG0680033852.01.T01 | AT5G67190 | 57.143 | 56 | 24 | 0 | 33 | 88 | 21 | 76 | 1.73e-16 | 74.3 |
MsG0680033852.01.T01 | AT2G33710 | 49.367 | 79 | 35 | 1 | 28 | 101 | 65 | 143 | 1.85e-16 | 75.1 |
MsG0680033852.01.T01 | AT1G78080 | 59.322 | 59 | 24 | 0 | 32 | 90 | 151 | 209 | 2.00e-16 | 76.6 |
MsG0680033852.01.T01 | AT2G33710 | 49.367 | 79 | 35 | 1 | 28 | 101 | 65 | 143 | 2.14e-16 | 75.1 |
MsG0680033852.01.T01 | AT1G19210 | 36.522 | 115 | 73 | 0 | 33 | 147 | 12 | 126 | 7.06e-16 | 72.8 |
MsG0680033852.01.T01 | AT3G11020 | 56.061 | 66 | 29 | 0 | 27 | 92 | 72 | 137 | 7.80e-16 | 74.7 |
MsG0680033852.01.T01 | AT4G28140 | 55.932 | 59 | 26 | 0 | 32 | 90 | 142 | 200 | 8.08e-16 | 74.3 |
MsG0680033852.01.T01 | AT1G36060 | 61.404 | 57 | 22 | 0 | 32 | 88 | 142 | 198 | 8.50e-16 | 74.7 |
MsG0680033852.01.T01 | AT3G57600 | 52.778 | 72 | 34 | 0 | 17 | 88 | 12 | 83 | 9.81e-16 | 73.9 |
MsG0680033852.01.T01 | AT2G20880 | 39.450 | 109 | 61 | 1 | 32 | 140 | 186 | 289 | 1.21e-15 | 74.3 |
MsG0680033852.01.T01 | AT4G27950 | 59.649 | 57 | 23 | 0 | 33 | 89 | 118 | 174 | 1.78e-15 | 73.9 |
MsG0680033852.01.T01 | AT5G13330 | 54.688 | 64 | 27 | 1 | 29 | 92 | 37 | 98 | 2.09e-15 | 72.0 |
MsG0680033852.01.T01 | AT3G15210 | 60.714 | 56 | 22 | 0 | 33 | 88 | 25 | 80 | 2.61e-15 | 72.0 |
MsG0680033852.01.T01 | AT1G03800 | 52.941 | 68 | 29 | 1 | 21 | 88 | 44 | 108 | 3.57e-15 | 72.0 |
MsG0680033852.01.T01 | AT5G61890 | 54.688 | 64 | 27 | 1 | 29 | 92 | 88 | 149 | 4.07e-15 | 72.0 |
MsG0680033852.01.T01 | AT5G61600 | 60.656 | 61 | 21 | 2 | 29 | 88 | 86 | 144 | 6.36e-15 | 71.2 |
MsG0680033852.01.T01 | AT5G64750 | 35.652 | 115 | 65 | 3 | 43 | 154 | 195 | 303 | 9.34e-15 | 72.0 |
MsG0680033852.01.T01 | AT5G07580 | 49.367 | 79 | 37 | 2 | 27 | 104 | 106 | 182 | 1.10e-14 | 70.1 |
MsG0680033852.01.T01 | AT1G71520 | 33.803 | 142 | 71 | 5 | 27 | 162 | 8 | 132 | 1.12e-14 | 68.6 |
MsG0680033852.01.T01 | AT3G61630 | 48.101 | 79 | 35 | 1 | 33 | 111 | 105 | 177 | 1.13e-14 | 71.2 |
MsG0680033852.01.T01 | AT5G44210 | 58.929 | 56 | 23 | 0 | 33 | 88 | 33 | 88 | 1.21e-14 | 69.7 |
MsG0680033852.01.T01 | AT1G15360 | 58.929 | 56 | 23 | 0 | 33 | 88 | 7 | 62 | 1.31e-14 | 69.7 |
MsG0680033852.01.T01 | AT1G15360 | 58.929 | 56 | 23 | 0 | 33 | 88 | 7 | 62 | 1.31e-14 | 69.7 |
MsG0680033852.01.T01 | AT4G11140 | 57.143 | 56 | 24 | 0 | 33 | 88 | 87 | 142 | 1.42e-14 | 70.9 |
MsG0680033852.01.T01 | AT1G22810 | 39.785 | 93 | 41 | 2 | 33 | 117 | 14 | 99 | 1.48e-14 | 68.2 |
MsG0680033852.01.T01 | AT5G05410 | 57.627 | 59 | 25 | 0 | 33 | 91 | 79 | 137 | 1.51e-14 | 70.9 |
MsG0680033852.01.T01 | AT1G75490 | 48.611 | 72 | 37 | 0 | 32 | 103 | 41 | 112 | 1.52e-14 | 69.7 |
MsG0680033852.01.T01 | AT1G43160 | 37.405 | 131 | 70 | 3 | 33 | 163 | 61 | 179 | 1.71e-14 | 69.3 |
MsG0680033852.01.T01 | AT5G47230 | 52.778 | 72 | 33 | 1 | 18 | 88 | 141 | 212 | 2.00e-14 | 70.5 |
MsG0680033852.01.T01 | AT5G05410 | 57.627 | 59 | 25 | 0 | 33 | 91 | 79 | 137 | 2.02e-14 | 70.9 |
MsG0680033852.01.T01 | AT5G51190 | 57.143 | 63 | 24 | 2 | 27 | 88 | 68 | 128 | 2.10e-14 | 69.3 |
MsG0680033852.01.T01 | AT1G72360 | 44.737 | 76 | 42 | 0 | 13 | 88 | 54 | 129 | 3.42e-14 | 69.3 |
MsG0680033852.01.T01 | AT1G72360 | 49.206 | 63 | 32 | 0 | 26 | 88 | 18 | 80 | 3.58e-14 | 68.6 |
MsG0680033852.01.T01 | AT5G25390 | 55.357 | 56 | 25 | 0 | 33 | 88 | 7 | 62 | 5.00e-14 | 67.8 |
MsG0680033852.01.T01 | AT5G43410 | 55.000 | 60 | 26 | 1 | 30 | 88 | 12 | 71 | 5.05e-14 | 66.6 |
MsG0680033852.01.T01 | AT1G72360 | 49.206 | 63 | 32 | 0 | 26 | 88 | 69 | 131 | 9.43e-14 | 68.2 |
MsG0680033852.01.T01 | AT4G31060 | 41.463 | 82 | 44 | 1 | 11 | 88 | 1 | 82 | 9.53e-14 | 67.0 |
MsG0680033852.01.T01 | AT3G23230 | 51.613 | 62 | 29 | 1 | 33 | 93 | 20 | 81 | 1.06e-13 | 65.9 |
MsG0680033852.01.T01 | AT5G53290 | 56.140 | 57 | 25 | 0 | 33 | 89 | 125 | 181 | 1.22e-13 | 68.9 |
MsG0680033852.01.T01 | AT1G28370 | 57.143 | 56 | 24 | 0 | 33 | 88 | 20 | 75 | 1.36e-13 | 66.2 |
MsG0680033852.01.T01 | AT5G18450 | 47.500 | 80 | 38 | 1 | 9 | 88 | 14 | 89 | 1.63e-13 | 68.2 |
MsG0680033852.01.T01 | AT2G46310 | 55.357 | 56 | 25 | 0 | 33 | 88 | 99 | 154 | 1.67e-13 | 67.8 |
MsG0680033852.01.T01 | AT1G28370 | 57.143 | 56 | 24 | 0 | 33 | 88 | 58 | 113 | 2.15e-13 | 66.2 |
MsG0680033852.01.T01 | AT3G20310 | 53.226 | 62 | 29 | 0 | 27 | 88 | 21 | 82 | 2.77e-13 | 66.6 |
MsG0680033852.01.T01 | AT4G23750 | 54.386 | 57 | 26 | 0 | 33 | 89 | 122 | 178 | 3.74e-13 | 67.4 |
MsG0680033852.01.T01 | AT4G23750 | 54.386 | 57 | 26 | 0 | 33 | 89 | 122 | 178 | 3.74e-13 | 67.4 |
MsG0680033852.01.T01 | AT5G25190 | 58.929 | 56 | 23 | 0 | 33 | 88 | 8 | 63 | 6.65e-13 | 64.7 |
MsG0680033852.01.T01 | AT1G28360 | 55.000 | 60 | 27 | 0 | 33 | 92 | 12 | 71 | 7.09e-13 | 64.7 |
MsG0680033852.01.T01 | AT4G17490 | 55.556 | 63 | 25 | 2 | 27 | 88 | 133 | 193 | 8.56e-13 | 65.9 |
MsG0680033852.01.T01 | AT1G77640 | 45.556 | 90 | 43 | 1 | 33 | 116 | 43 | 132 | 1.03e-12 | 65.1 |
MsG0680033852.01.T01 | AT2G40340 | 53.571 | 56 | 26 | 0 | 33 | 88 | 14 | 69 | 1.55e-12 | 65.1 |
MsG0680033852.01.T01 | AT2G40340 | 53.571 | 56 | 26 | 0 | 33 | 88 | 14 | 69 | 1.55e-12 | 65.1 |
MsG0680033852.01.T01 | AT2G40340 | 53.571 | 56 | 26 | 0 | 33 | 88 | 14 | 69 | 1.55e-12 | 65.1 |
MsG0680033852.01.T01 | AT1G50640 | 57.143 | 56 | 24 | 0 | 33 | 88 | 28 | 83 | 1.99e-12 | 63.9 |
MsG0680033852.01.T01 | AT5G19790 | 53.448 | 58 | 27 | 0 | 33 | 90 | 22 | 79 | 2.05e-12 | 64.3 |
MsG0680033852.01.T01 | AT5G47220 | 56.140 | 57 | 24 | 1 | 33 | 88 | 117 | 173 | 2.37e-12 | 64.3 |
MsG0680033852.01.T01 | AT2G40340 | 53.571 | 56 | 26 | 0 | 33 | 88 | 72 | 127 | 2.47e-12 | 64.7 |
MsG0680033852.01.T01 | AT2G40340 | 53.571 | 56 | 26 | 0 | 33 | 88 | 72 | 127 | 2.78e-12 | 64.7 |
MsG0680033852.01.T01 | AT2G40340 | 53.571 | 56 | 26 | 0 | 33 | 88 | 79 | 134 | 3.32e-12 | 64.7 |
MsG0680033852.01.T01 | AT5G61590 | 59.701 | 67 | 24 | 2 | 23 | 88 | 99 | 163 | 7.49e-12 | 62.0 |
MsG0680033852.01.T01 | AT1G12890 | 44.872 | 78 | 40 | 1 | 11 | 88 | 2 | 76 | 7.97e-12 | 62.4 |
MsG0680033852.01.T01 | AT2G40220 | 64.912 | 57 | 20 | 0 | 33 | 89 | 55 | 111 | 8.91e-12 | 63.2 |
MsG0680033852.01.T01 | AT4G17500 | 56.140 | 57 | 24 | 1 | 33 | 88 | 148 | 204 | 1.51e-11 | 62.4 |
MsG0680033852.01.T01 | AT3G23240 | 50.000 | 58 | 28 | 1 | 33 | 89 | 82 | 139 | 2.02e-11 | 61.2 |
MsG0680033852.01.T01 | AT5G25390 | 51.786 | 56 | 24 | 1 | 33 | 88 | 7 | 59 | 2.11e-11 | 60.8 |
MsG0680033852.01.T01 | AT2G44840 | 54.386 | 57 | 25 | 1 | 33 | 88 | 92 | 148 | 2.16e-11 | 61.2 |
MsG0680033852.01.T01 | AT5G07310 | 49.315 | 73 | 35 | 1 | 16 | 88 | 77 | 147 | 2.78e-11 | 61.2 |
MsG0680033852.01.T01 | AT1G12980 | 55.357 | 56 | 25 | 0 | 33 | 88 | 57 | 112 | 4.50e-11 | 61.2 |
MsG0680033852.01.T01 | AT1G24590 | 51.562 | 64 | 28 | 1 | 33 | 96 | 58 | 118 | 4.56e-11 | 61.2 |
MsG0680033852.01.T01 | AT2G40350 | 48.214 | 56 | 29 | 0 | 33 | 88 | 74 | 129 | 6.36e-11 | 58.9 |
MsG0680033852.01.T01 | AT2G40350 | 48.214 | 56 | 29 | 0 | 33 | 88 | 67 | 122 | 6.69e-11 | 58.5 |
Find 58 sgRNAs with CRISPR-Local
Find 65 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGAAGAGGAACTTAGATAAA+TGG | 0.259157 | 6:+74810032 | MsG0680033852.01.T01:CDS |
CAAATCCTAGTCTTCTTATT+CGG | 0.304564 | 6:-74810073 | None:intergenic |
AGCAGGGAGGAAGAAGTTTA+AGG | 0.309502 | 6:+74809979 | MsG0680033852.01.T01:CDS |
GCCAGAGTTGTGGAGGAATA+TGG | 0.338237 | 6:+74810408 | MsG0680033852.01.T01:CDS |
TTAAACTTCTTCCTCCCTGC+TGG | 0.404819 | 6:-74809977 | None:intergenic |
CGAATAAGAAGACTAGGATT+TGG | 0.406523 | 6:+74810074 | MsG0680033852.01.T01:CDS |
GCCTCAGCGGTGGCAGGAAT+AGG | 0.415517 | 6:-74810208 | None:intergenic |
GGCAGCTGCAGAAGCTGCAG+AGG | 0.416047 | 6:+74810246 | MsG0680033852.01.T01:CDS |
GAAGAGGAACTTAGATAAAT+GGG | 0.423648 | 6:+74810033 | MsG0680033852.01.T01:CDS |
GTGTGCACGGGCAGCCATCT+CGG | 0.428196 | 6:-74810116 | None:intergenic |
CGTTGCAGCAATTGCATTGA+GGG | 0.436008 | 6:+74810141 | MsG0680033852.01.T01:CDS |
CTGTCTCAACTTTGCAGACT+CGG | 0.436160 | 6:+74810174 | MsG0680033852.01.T01:CDS |
TTAGTCATTAAAGTCTTGTC+TGG | 0.441603 | 6:-74810277 | None:intergenic |
AATGTCCCCTACACATAGTA+TGG | 0.442156 | 6:+74810435 | MsG0680033852.01.T01:CDS |
ATATGTTTACAAGTAACAAC+GGG | 0.454775 | 6:+74809921 | None:intergenic |
TTGCTGCAACGTCGTGTGCA+CGG | 0.466937 | 6:-74810129 | None:intergenic |
TGCTGCAACGTCGTGTGCAC+GGG | 0.472831 | 6:-74810128 | None:intergenic |
TGTATAGAGGTGTGAGGAAG+AGG | 0.474025 | 6:+74810017 | MsG0680033852.01.T01:CDS |
AGTACAAGACTTTCAATATG+AGG | 0.490333 | 6:+74810480 | MsG0680033852.01.T01:CDS |
CATGCTCCATACTATGTGTA+GGG | 0.491173 | 6:-74810441 | None:intergenic |
ACTCGCCACCCGGTGTATAG+AGG | 0.496516 | 6:+74810004 | MsG0680033852.01.T01:CDS |
CTGAGGCAAAAGACATTCAA+AGG | 0.499259 | 6:+74810224 | MsG0680033852.01.T01:CDS |
TGAAGTCGAAGAAGAAGAAG+AGG | 0.500617 | 6:+74810372 | MsG0680033852.01.T01:CDS |
GCCATATTCCTCCACAACTC+TGG | 0.506491 | 6:-74810409 | None:intergenic |
TAAATGGGTATGTGAAATGA+GGG | 0.506863 | 6:+74810048 | MsG0680033852.01.T01:CDS |
AATATGAGGAGGTATCACTA+TGG | 0.509514 | 6:+74810494 | MsG0680033852.01.T01:CDS |
ATAAATGGGTATGTGAAATG+AGG | 0.510310 | 6:+74810047 | MsG0680033852.01.T01:CDS |
ACGTTGCAGCAATTGCATTG+AGG | 0.536298 | 6:+74810140 | MsG0680033852.01.T01:CDS |
TCATGCTCCATACTATGTGT+AGG | 0.541468 | 6:-74810442 | None:intergenic |
AAGAAGACTAGGATTTGGCT+AGG | 0.549278 | 6:+74810079 | MsG0680033852.01.T01:CDS |
GTTTAAGGAGACTCGCCACC+CGG | 0.558195 | 6:+74809994 | MsG0680033852.01.T01:CDS |
CGAGTCTGCAAAGTTGAGAC+AGG | 0.558907 | 6:-74810173 | None:intergenic |
TTACAAGTAACAACGGGGAG+GGG | 0.563550 | 6:+74809927 | MsG0680033852.01.T01:CDS |
TGAGGCAAAAGACATTCAAA+GGG | 0.575611 | 6:+74810225 | MsG0680033852.01.T01:CDS |
TTCCTCACACCTCTATACAC+CGG | 0.578151 | 6:-74810013 | None:intergenic |
TCCTCACACCTCTATACACC+GGG | 0.580421 | 6:-74810012 | None:intergenic |
TCCTATTCCTGCCACCGCTG+AGG | 0.581983 | 6:+74810207 | MsG0680033852.01.T01:CDS |
GGGAACCGAATAAGAAGACT+AGG | 0.583565 | 6:+74810068 | MsG0680033852.01.T01:CDS |
TAATGACATTGACACGGTTG+TGG | 0.584743 | 6:+74810297 | MsG0680033852.01.T01:CDS |
TTTACAAGTAACAACGGGGA+GGG | 0.587349 | 6:+74809926 | MsG0680033852.01.T01:CDS |
CAAGTAACAACGGGGAGGGG+CGG | 0.588787 | 6:+74809930 | MsG0680033852.01.T01:CDS |
TCAACTTTGCAGACTCGGTG+TGG | 0.601701 | 6:+74810179 | MsG0680033852.01.T01:CDS |
TGTGGCTGTTGTCGTTGCAG+TGG | 0.604136 | 6:+74810315 | MsG0680033852.01.T01:CDS |
ACTTTGCAGACTCGGTGTGG+AGG | 0.609381 | 6:+74810182 | MsG0680033852.01.T01:CDS |
TGTTGAATATGCCAGAGTTG+TGG | 0.615027 | 6:+74810398 | MsG0680033852.01.T01:CDS |
TGTCGTTGCAGTGGAAGAAG+AGG | 0.624573 | 6:+74810324 | MsG0680033852.01.T01:CDS |
GATATGTTTACAAGTAACAA+CGG | 0.629910 | 6:+74809920 | None:intergenic |
GTTGCAGCAATTGCATTGAG+GGG | 0.634472 | 6:+74810142 | MsG0680033852.01.T01:CDS |
AGAAGACTAGGATTTGGCTA+GGG | 0.635435 | 6:+74810080 | MsG0680033852.01.T01:CDS |
AATGACTAATGACATTGACA+CGG | 0.658662 | 6:+74810291 | MsG0680033852.01.T01:CDS |
CAAAGTTGAGACAGGCGTAG+CGG | 0.672645 | 6:-74810165 | None:intergenic |
ACAAGACTTTCAATATGAGG+AGG | 0.676699 | 6:+74810483 | MsG0680033852.01.T01:CDS |
TGAATATGCCAGAGTTGTGG+AGG | 0.686416 | 6:+74810401 | MsG0680033852.01.T01:CDS |
GTTTACAAGTAACAACGGGG+AGG | 0.703815 | 6:+74809925 | MsG0680033852.01.T01:CDS |
ACCCGGTGTATAGAGGTGTG+AGG | 0.705873 | 6:+74810011 | MsG0680033852.01.T01:CDS |
ATGCTCCATACTATGTGTAG+GGG | 0.710393 | 6:-74810440 | None:intergenic |
TCACACCTCTATACACCGGG+TGG | 0.726886 | 6:-74810009 | None:intergenic |
TATGTTTACAAGTAACAACG+GGG | 0.831032 | 6:+74809922 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
AATGACTAATGACATTGACA+CGG | + | Chr6:74810291-74810310 | MsG0680033852.01.T01:CDS | 30.0% | |
AGTACAAGACTTTCAATATG+AGG | + | Chr6:74810480-74810499 | MsG0680033852.01.T01:CDS | 30.0% | |
ATAAATGGGTATGTGAAATG+AGG | + | Chr6:74810047-74810066 | MsG0680033852.01.T01:CDS | 30.0% | |
GAAGAGGAACTTAGATAAAT+GGG | + | Chr6:74810033-74810052 | MsG0680033852.01.T01:CDS | 30.0% | |
TAAATGGGTATGTGAAATGA+GGG | + | Chr6:74810048-74810067 | MsG0680033852.01.T01:CDS | 30.0% | |
! | CAAATCCTAGTCTTCTTATT+CGG | - | Chr6:74810076-74810095 | None:intergenic | 30.0% |
! | TTAGTCATTAAAGTCTTGTC+TGG | - | Chr6:74810280-74810299 | None:intergenic | 30.0% |
ACAAGACTTTCAATATGAGG+AGG | + | Chr6:74810483-74810502 | MsG0680033852.01.T01:CDS | 35.0% | |
CGAATAAGAAGACTAGGATT+TGG | + | Chr6:74810074-74810093 | MsG0680033852.01.T01:CDS | 35.0% | |
GGAAGAGGAACTTAGATAAA+TGG | + | Chr6:74810032-74810051 | MsG0680033852.01.T01:CDS | 35.0% | |
TGAGGCAAAAGACATTCAAA+GGG | + | Chr6:74810225-74810244 | MsG0680033852.01.T01:CDS | 35.0% | |
!! | AATATGAGGAGGTATCACTA+TGG | + | Chr6:74810494-74810513 | MsG0680033852.01.T01:CDS | 35.0% |
AAGAAGACTAGGATTTGGCT+AGG | + | Chr6:74810079-74810098 | MsG0680033852.01.T01:CDS | 40.0% | |
AATGTCCCCTACACATAGTA+TGG | + | Chr6:74810435-74810454 | MsG0680033852.01.T01:CDS | 40.0% | |
AGAAGACTAGGATTTGGCTA+GGG | + | Chr6:74810080-74810099 | MsG0680033852.01.T01:CDS | 40.0% | |
ATGCTCCATACTATGTGTAG+GGG | - | Chr6:74810443-74810462 | None:intergenic | 40.0% | |
CATGCTCCATACTATGTGTA+GGG | - | Chr6:74810444-74810463 | None:intergenic | 40.0% | |
CTGAGGCAAAAGACATTCAA+AGG | + | Chr6:74810224-74810243 | MsG0680033852.01.T01:CDS | 40.0% | |
TAATGACATTGACACGGTTG+TGG | + | Chr6:74810297-74810316 | MsG0680033852.01.T01:CDS | 40.0% | |
TCATGCTCCATACTATGTGT+AGG | - | Chr6:74810445-74810464 | None:intergenic | 40.0% | |
TGAAGTCGAAGAAGAAGAAG+AGG | + | Chr6:74810372-74810391 | MsG0680033852.01.T01:CDS | 40.0% | |
TGTTGAATATGCCAGAGTTG+TGG | + | Chr6:74810398-74810417 | MsG0680033852.01.T01:CDS | 40.0% | |
TTTACAAGTAACAACGGGGA+GGG | + | Chr6:74809926-74809945 | MsG0680033852.01.T01:CDS | 40.0% | |
! | TTGAATGTCTTTTGCCTCAG+CGG | - | Chr6:74810224-74810243 | None:intergenic | 40.0% |
ACGTTGCAGCAATTGCATTG+AGG | + | Chr6:74810140-74810159 | MsG0680033852.01.T01:CDS | 45.0% | |
AGCAGGGAGGAAGAAGTTTA+AGG | + | Chr6:74809979-74809998 | MsG0680033852.01.T01:CDS | 45.0% | |
AGTTGCCCAAAAAAACCAGC+AGG | + | Chr6:74809962-74809981 | MsG0680033852.01.T01:CDS | 45.0% | |
CGTTGCAGCAATTGCATTGA+GGG | + | Chr6:74810141-74810160 | MsG0680033852.01.T01:CDS | 45.0% | |
CTGTCTCAACTTTGCAGACT+CGG | + | Chr6:74810174-74810193 | MsG0680033852.01.T01:CDS | 45.0% | |
GGGAACCGAATAAGAAGACT+AGG | + | Chr6:74810068-74810087 | MsG0680033852.01.T01:CDS | 45.0% | |
GTTGCAGCAATTGCATTGAG+GGG | + | Chr6:74810142-74810161 | MsG0680033852.01.T01:CDS | 45.0% | |
GTTGCCCAAAAAAACCAGCA+GGG | + | Chr6:74809963-74809982 | MsG0680033852.01.T01:CDS | 45.0% | |
GTTTACAAGTAACAACGGGG+AGG | + | Chr6:74809925-74809944 | MsG0680033852.01.T01:CDS | 45.0% | |
TGAATATGCCAGAGTTGTGG+AGG | + | Chr6:74810401-74810420 | MsG0680033852.01.T01:CDS | 45.0% | |
TTAAACTTCTTCCTCCCTGC+TGG | - | Chr6:74809980-74809999 | None:intergenic | 45.0% | |
TTACAAGTAACAACGGGGAG+GGG | + | Chr6:74809927-74809946 | MsG0680033852.01.T01:CDS | 45.0% | |
TTCCTCACACCTCTATACAC+CGG | - | Chr6:74810016-74810035 | None:intergenic | 45.0% | |
! | TGTATAGAGGTGTGAGGAAG+AGG | + | Chr6:74810017-74810036 | MsG0680033852.01.T01:CDS | 45.0% |
!!! | TCCTCCCTGCTGGTTTTTTT+GGG | - | Chr6:74809970-74809989 | None:intergenic | 45.0% |
!!! | TGGTTTTTTTGGGCAACTCG+CGG | - | Chr6:74809960-74809979 | None:intergenic | 45.0% |
!!! | TTCCTCCCTGCTGGTTTTTT+TGG | - | Chr6:74809971-74809990 | None:intergenic | 45.0% |
CAAAGTTGAGACAGGCGTAG+CGG | - | Chr6:74810168-74810187 | None:intergenic | 50.0% | |
CGAGTCTGCAAAGTTGAGAC+AGG | - | Chr6:74810176-74810195 | None:intergenic | 50.0% | |
GCCAGAGTTGTGGAGGAATA+TGG | + | Chr6:74810408-74810427 | MsG0680033852.01.T01:CDS | 50.0% | |
GCCATATTCCTCCACAACTC+TGG | - | Chr6:74810412-74810431 | None:intergenic | 50.0% | |
TCCTCACACCTCTATACACC+GGG | - | Chr6:74810015-74810034 | None:intergenic | 50.0% | |
TGTCGTTGCAGTGGAAGAAG+AGG | + | Chr6:74810324-74810343 | MsG0680033852.01.T01:CDS | 50.0% | |
! | AATGTCTTTTGCCTCAGCGG+TGG | - | Chr6:74810221-74810240 | None:intergenic | 50.0% |
! | GACTTTTGCAACAGCCGAGA+TGG | + | Chr6:74810102-74810121 | MsG0680033852.01.T01:CDS | 50.0% |
!! | TCAACTTTGCAGACTCGGTG+TGG | + | Chr6:74810179-74810198 | MsG0680033852.01.T01:CDS | 50.0% |
GCCCAAAAAAACCAGCAGGG+AGG | + | Chr6:74809966-74809985 | MsG0680033852.01.T01:CDS | 55.0% | |
GTTTAAGGAGACTCGCCACC+CGG | + | Chr6:74809994-74810013 | MsG0680033852.01.T01:CDS | 55.0% | |
TCACACCTCTATACACCGGG+TGG | - | Chr6:74810012-74810031 | None:intergenic | 55.0% | |
TGTGGCTGTTGTCGTTGCAG+TGG | + | Chr6:74810315-74810334 | MsG0680033852.01.T01:CDS | 55.0% | |
TTGCTGCAACGTCGTGTGCA+CGG | - | Chr6:74810132-74810151 | None:intergenic | 55.0% | |
! | ACCCGGTGTATAGAGGTGTG+AGG | + | Chr6:74810011-74810030 | MsG0680033852.01.T01:CDS | 55.0% |
!! | ACTTTGCAGACTCGGTGTGG+AGG | + | Chr6:74810182-74810201 | MsG0680033852.01.T01:CDS | 55.0% |
ACTCGCCACCCGGTGTATAG+AGG | + | Chr6:74810004-74810023 | MsG0680033852.01.T01:CDS | 60.0% | |
CAAGTAACAACGGGGAGGGG+CGG | + | Chr6:74809930-74809949 | MsG0680033852.01.T01:CDS | 60.0% | |
TCCTATTCCTGCCACCGCTG+AGG | + | Chr6:74810207-74810226 | MsG0680033852.01.T01:CDS | 60.0% | |
TGCTGCAACGTCGTGTGCAC+GGG | - | Chr6:74810131-74810150 | None:intergenic | 60.0% | |
! | TCTTTTGCCTCAGCGGTGGC+AGG | - | Chr6:74810217-74810236 | None:intergenic | 60.0% |
GCCTCAGCGGTGGCAGGAAT+AGG | - | Chr6:74810211-74810230 | None:intergenic | 65.0% | |
GGCAGCTGCAGAAGCTGCAG+AGG | + | Chr6:74810246-74810265 | MsG0680033852.01.T01:CDS | 65.0% | |
GTGTGCACGGGCAGCCATCT+CGG | - | Chr6:74810119-74810138 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr6 | gene | 74809923 | 74810525 | 74809923 | ID=MsG0680033852.01;Name=MsG0680033852.01 |
Chr6 | mRNA | 74809923 | 74810525 | 74809923 | ID=MsG0680033852.01.T01;Parent=MsG0680033852.01;Name=MsG0680033852.01.T01;_AED=0.47;_eAED=0.47;_QI=0|-1|0|1|-1|1|1|0|200 |
Chr6 | exon | 74809923 | 74810525 | 74809923 | ID=MsG0680033852.01.T01:exon:5313;Parent=MsG0680033852.01.T01 |
Chr6 | CDS | 74809923 | 74810525 | 74809923 | ID=MsG0680033852.01.T01:cds;Parent=MsG0680033852.01.T01 |
Gene Sequence |
Protein sequence |