Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034092.01.T01 | XP_024638204.2 | 80.605 | 562 | 44 | 5 | 1 | 499 | 1177 | 1736 | 0 | 885 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034092.01.T01 | V9M398 | 41.379 | 116 | 66 | 1 | 1 | 116 | 684 | 797 | 8.92E-14 | 78.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034092.01.T01 | G7JSB9 | 80.605 | 562 | 44 | 5 | 1 | 499 | 1177 | 1736 | 0.0 | 885 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180004114.01 | MsG0680034092.01 | 0.822918 | 1.831665e-53 | 1.554199e-50 |
| MsG0180005172.01 | MsG0680034092.01 | 0.801726 | 7.859665e-49 | 3.780763e-46 |
| MsG0180005692.01 | MsG0680034092.01 | 0.811030 | 8.583222e-51 | 5.256515e-48 |
| MsG0380012021.01 | MsG0680034092.01 | 0.844772 | 6.144252e-59 | 1.002496e-55 |
| MsG0380012033.01 | MsG0680034092.01 | 0.837324 | 5.558231e-57 | 7.194365e-54 |
| MsG0680034091.01 | MsG0680034092.01 | 0.819600 | 1.066808e-52 | 8.246383e-50 |
| MsG0680034092.01 | MsG0680034093.01 | 0.879051 | 1.708060e-69 | 9.126165e-66 |
| MsG0680034092.01 | MsG0680035133.01 | 0.837439 | 5.193795e-57 | 6.746956e-54 |
| MsG0680034092.01 | MsG0780038113.01 | 0.807891 | 4.049376e-50 | 2.282138e-47 |
| MsG0680034092.01 | MsG0780039249.01 | 0.827759 | 1.310159e-54 | 1.276628e-51 |
| MsG0680034092.01 | MsG0880044264.01 | 0.809303 | 2.022615e-50 | 1.183276e-47 |
| MsG0680034092.01 | MsG0880045590.01 | 0.809384 | 1.943009e-50 | 1.139206e-47 |
| MsG0680034092.01 | MsG0880045782.01 | 0.803220 | 3.867299e-49 | 1.932545e-46 |
| MsG0480019034.01 | MsG0680034092.01 | 0.809149 | 2.182451e-50 | 1.271552e-47 |
| MsG0480022120.01 | MsG0680034092.01 | 0.821697 | 3.518388e-53 | 2.883391e-50 |
| MsG0480022520.01 | MsG0680034092.01 | 0.806707 | 7.218118e-50 | 3.944775e-47 |
| MsG0480023903.01 | MsG0680034092.01 | 0.815943 | 7.133222e-52 | 4.986360e-49 |
| MsG0380015852.01 | MsG0680034092.01 | 0.840294 | 9.482167e-58 | 1.344608e-54 |
| MsG0580027661.01 | MsG0680034092.01 | 0.816387 | 5.676635e-52 | 4.016762e-49 |
| MsG0580027828.01 | MsG0680034092.01 | 0.809895 | 1.509236e-50 | 8.968701e-48 |
| MsG0580029672.01 | MsG0680034092.01 | 0.804966 | 1.676342e-49 | 8.762066e-47 |
| MsG0280007481.01 | MsG0680034092.01 | 0.801408 | 9.130780e-49 | 4.357207e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034092.01.T01 | MTR_4g020640 | 80.605 | 562 | 44 | 5 | 1 | 499 | 1177 | 1736 | 0.0 | 885 |
| MsG0680034092.01.T01 | MTR_4g020640 | 81.004 | 558 | 41 | 5 | 1 | 495 | 1177 | 1732 | 0.0 | 884 |
| MsG0680034092.01.T01 | MTR_0286s0020 | 71.400 | 507 | 97 | 7 | 1 | 495 | 158 | 628 | 0.0 | 697 |
| MsG0680034092.01.T01 | MTR_4g020700 | 63.477 | 512 | 136 | 8 | 1 | 500 | 1159 | 1631 | 0.0 | 620 |
| MsG0680034092.01.T01 | MTR_4g020700 | 63.477 | 512 | 136 | 8 | 1 | 500 | 1159 | 1631 | 0.0 | 619 |
| MsG0680034092.01.T01 | MTR_4g020550 | 77.749 | 391 | 86 | 1 | 1 | 391 | 1117 | 1506 | 0.0 | 616 |
| MsG0680034092.01.T01 | MTR_4g020590 | 75.126 | 398 | 92 | 4 | 1 | 393 | 1145 | 1540 | 0.0 | 580 |
| MsG0680034092.01.T01 | MTR_4g020590 | 75.126 | 398 | 92 | 4 | 1 | 393 | 1138 | 1533 | 0.0 | 580 |
| MsG0680034092.01.T01 | MTR_4g021170 | 70.309 | 421 | 110 | 4 | 1 | 416 | 1138 | 1548 | 0.0 | 572 |
| MsG0680034092.01.T01 | MTR_4g020535 | 62.325 | 499 | 153 | 8 | 1 | 476 | 635 | 1121 | 0.0 | 567 |
| MsG0680034092.01.T01 | MTR_4g021057 | 67.933 | 421 | 119 | 5 | 1 | 416 | 1177 | 1586 | 0.0 | 561 |
| MsG0680034092.01.T01 | MTR_4g020760 | 65.376 | 439 | 114 | 5 | 1 | 427 | 282 | 694 | 0.0 | 531 |
| MsG0680034092.01.T01 | MTR_4g020850 | 70.352 | 398 | 109 | 4 | 1 | 393 | 1364 | 1757 | 1.25e-177 | 546 |
| MsG0680034092.01.T01 | MTR_4g020850 | 76.415 | 106 | 23 | 2 | 1 | 106 | 637 | 740 | 6.76e-40 | 155 |
| MsG0680034092.01.T01 | MTR_4g021023 | 69.114 | 395 | 96 | 3 | 1 | 392 | 933 | 1304 | 1.18e-172 | 525 |
| MsG0680034092.01.T01 | MTR_4g021023 | 69.114 | 395 | 96 | 3 | 1 | 392 | 1184 | 1555 | 1.21e-170 | 525 |
| MsG0680034092.01.T01 | MTR_0552s0040 | 66.334 | 401 | 109 | 7 | 1 | 393 | 91 | 473 | 7.46e-170 | 494 |
| MsG0680034092.01.T01 | MTR_4g021095 | 67.830 | 401 | 112 | 5 | 1 | 393 | 1022 | 1413 | 8.92e-168 | 514 |
| MsG0680034092.01.T01 | MTR_4g020490 | 63.964 | 444 | 107 | 7 | 1 | 438 | 1307 | 1703 | 2.09e-167 | 516 |
| MsG0680034092.01.T01 | MTR_4g014570 | 54.822 | 394 | 157 | 5 | 1 | 376 | 710 | 1100 | 8.99e-132 | 410 |
| MsG0680034092.01.T01 | MTR_4g015030 | 55.112 | 401 | 161 | 8 | 1 | 390 | 698 | 1090 | 4.11e-130 | 405 |
| MsG0680034092.01.T01 | MTR_4g015060 | 52.436 | 431 | 173 | 9 | 1 | 412 | 682 | 1099 | 1.47e-129 | 404 |
| MsG0680034092.01.T01 | MTR_6g015505 | 52.074 | 434 | 176 | 9 | 1 | 409 | 448 | 874 | 2.53e-129 | 399 |
| MsG0680034092.01.T01 | MTR_6g016000 | 52.956 | 406 | 170 | 6 | 1 | 387 | 699 | 1102 | 7.07e-128 | 399 |
| MsG0680034092.01.T01 | MTR_6g016000 | 52.956 | 406 | 170 | 6 | 1 | 387 | 717 | 1120 | 1.19e-127 | 399 |
| MsG0680034092.01.T01 | MTR_6g015405 | 52.475 | 404 | 172 | 5 | 1 | 390 | 682 | 1079 | 1.67e-125 | 394 |
| MsG0680034092.01.T01 | MTR_0373s0030 | 77.778 | 243 | 52 | 1 | 1 | 241 | 27 | 269 | 3.03e-125 | 367 |
| MsG0680034092.01.T01 | MTR_4g014990 | 50.980 | 408 | 176 | 7 | 1 | 390 | 671 | 1072 | 1.14e-124 | 391 |
| MsG0680034092.01.T01 | MTR_6g015680 | 53.056 | 409 | 171 | 7 | 1 | 391 | 678 | 1083 | 3.50e-122 | 384 |
| MsG0680034092.01.T01 | MTR_6g015490 | 52.206 | 408 | 165 | 7 | 1 | 390 | 502 | 897 | 9.92e-119 | 371 |
| MsG0680034092.01.T01 | MTR_6g015665 | 53.786 | 383 | 157 | 6 | 1 | 365 | 726 | 1106 | 1.26e-118 | 376 |
| MsG0680034092.01.T01 | MTR_6g015455 | 50.694 | 432 | 179 | 8 | 1 | 409 | 1025 | 1445 | 2.68e-118 | 380 |
| MsG0680034092.01.T01 | MTR_6g015455 | 41.702 | 235 | 111 | 5 | 136 | 366 | 201 | 413 | 1.94e-39 | 154 |
| MsG0680034092.01.T01 | MTR_7g055970 | 50.123 | 407 | 183 | 6 | 1 | 390 | 107 | 510 | 5.68e-118 | 358 |
| MsG0680034092.01.T01 | MTR_6g015490 | 52.206 | 408 | 165 | 7 | 1 | 390 | 728 | 1123 | 5.59e-117 | 372 |
| MsG0680034092.01.T01 | MTR_6g015430 | 51.000 | 400 | 166 | 7 | 1 | 382 | 502 | 889 | 3.88e-115 | 361 |
| MsG0680034092.01.T01 | MTR_6g015510 | 53.846 | 377 | 146 | 7 | 1 | 364 | 682 | 1043 | 4.63e-115 | 365 |
| MsG0680034092.01.T01 | MTR_6g015410 | 52.618 | 401 | 164 | 8 | 1 | 381 | 641 | 1035 | 6.90e-115 | 364 |
| MsG0680034092.01.T01 | MTR_4g020590 | 78.189 | 243 | 50 | 2 | 1 | 241 | 1145 | 1386 | 3.77e-114 | 368 |
| MsG0680034092.01.T01 | MTR_7g091540 | 50.611 | 409 | 154 | 8 | 1 | 387 | 301 | 683 | 7.42e-114 | 352 |
| MsG0680034092.01.T01 | MTR_6g015430 | 52.308 | 390 | 156 | 7 | 1 | 372 | 695 | 1072 | 8.55e-114 | 362 |
| MsG0680034092.01.T01 | MTR_6g015745 | 50.248 | 404 | 161 | 6 | 1 | 386 | 686 | 1067 | 1.17e-112 | 358 |
| MsG0680034092.01.T01 | MTR_6g015730 | 52.083 | 384 | 159 | 7 | 1 | 364 | 950 | 1328 | 3.98e-111 | 359 |
| MsG0680034092.01.T01 | MTR_6g015695 | 50.868 | 403 | 163 | 8 | 1 | 380 | 685 | 1075 | 1.84e-109 | 350 |
| MsG0680034092.01.T01 | MTR_6g015435 | 51.302 | 384 | 147 | 6 | 1 | 366 | 670 | 1031 | 3.62e-108 | 346 |
| MsG0680034092.01.T01 | MTR_0813s0020 | 76.279 | 215 | 46 | 2 | 1 | 213 | 67 | 278 | 3.15e-107 | 322 |
| MsG0680034092.01.T01 | MTR_4g021057 | 72.840 | 243 | 64 | 1 | 1 | 241 | 1177 | 1419 | 1.19e-106 | 347 |
| MsG0680034092.01.T01 | MTR_6g015775 | 52.507 | 379 | 141 | 7 | 1 | 364 | 765 | 1119 | 3.40e-104 | 337 |
| MsG0680034092.01.T01 | MTR_6g015775 | 70.652 | 92 | 27 | 0 | 2 | 93 | 649 | 740 | 5.62e-31 | 128 |
| MsG0680034092.01.T01 | MTR_4g023400 | 46.455 | 409 | 184 | 7 | 1 | 389 | 1153 | 1546 | 5.32e-103 | 339 |
| MsG0680034092.01.T01 | MTR_7g088950 | 48.593 | 391 | 181 | 5 | 1 | 374 | 1149 | 1536 | 8.14e-103 | 338 |
| MsG0680034092.01.T01 | MTR_7g088950 | 48.593 | 391 | 181 | 5 | 1 | 374 | 1150 | 1537 | 1.07e-102 | 338 |
| MsG0680034092.01.T01 | MTR_7g088950 | 48.593 | 391 | 181 | 5 | 1 | 374 | 1149 | 1536 | 1.07e-102 | 338 |
| MsG0680034092.01.T01 | MTR_7g088950 | 48.593 | 391 | 181 | 5 | 1 | 374 | 1115 | 1502 | 1.11e-102 | 337 |
| MsG0680034092.01.T01 | MTR_7g088950 | 48.593 | 391 | 181 | 5 | 1 | 374 | 1115 | 1502 | 1.24e-102 | 337 |
| MsG0680034092.01.T01 | MTR_7g088950 | 48.593 | 391 | 181 | 5 | 1 | 374 | 1115 | 1502 | 1.25e-102 | 337 |
| MsG0680034092.01.T01 | MTR_7g088950 | 48.593 | 391 | 181 | 5 | 1 | 374 | 1617 | 2004 | 2.54e-102 | 338 |
| MsG0680034092.01.T01 | MTR_7g088950 | 48.593 | 391 | 181 | 5 | 1 | 374 | 1651 | 2038 | 2.82e-102 | 337 |
| MsG0680034092.01.T01 | MTR_7g088950 | 49.239 | 394 | 174 | 7 | 1 | 374 | 1651 | 2038 | 3.57e-102 | 337 |
| MsG0680034092.01.T01 | MTR_4g020590 | 80.676 | 207 | 38 | 1 | 1 | 205 | 1145 | 1351 | 1.17e-100 | 330 |
| MsG0680034092.01.T01 | MTR_6g015675 | 47.493 | 379 | 153 | 7 | 6 | 366 | 119 | 469 | 2.88e-98 | 306 |
| MsG0680034092.01.T01 | MTR_0294s0010 | 46.535 | 404 | 171 | 7 | 1 | 390 | 499 | 871 | 9.09e-98 | 315 |
| MsG0680034092.01.T01 | MTR_4g015050 | 53.651 | 315 | 124 | 6 | 1 | 296 | 565 | 876 | 1.50e-95 | 309 |
| MsG0680034092.01.T01 | MTR_4g021027 | 64.463 | 242 | 62 | 3 | 1 | 240 | 407 | 626 | 6.64e-89 | 290 |
| MsG0680034092.01.T01 | MTR_4g021027 | 39.645 | 169 | 65 | 5 | 336 | 500 | 608 | 743 | 2.64e-19 | 92.0 |
| MsG0680034092.01.T01 | MTR_8g012190 | 44.103 | 390 | 179 | 6 | 1 | 372 | 638 | 1006 | 6.94e-89 | 295 |
| MsG0680034092.01.T01 | MTR_8g012190 | 44.103 | 390 | 179 | 6 | 1 | 372 | 632 | 1000 | 8.24e-89 | 294 |
| MsG0680034092.01.T01 | MTR_2g437560 | 43.133 | 415 | 177 | 8 | 1 | 384 | 615 | 1001 | 1.90e-88 | 293 |
| MsG0680034092.01.T01 | MTR_6g015600 | 46.234 | 385 | 164 | 10 | 1 | 364 | 383 | 745 | 3.39e-87 | 285 |
| MsG0680034092.01.T01 | MTR_4g020590 | 84.706 | 170 | 26 | 0 | 1 | 170 | 1145 | 1314 | 9.68e-87 | 291 |
| MsG0680034092.01.T01 | MTR_8g073730 | 45.170 | 383 | 171 | 7 | 1 | 365 | 642 | 1003 | 1.90e-86 | 288 |
| MsG0680034092.01.T01 | MTR_5g047530 | 42.714 | 398 | 189 | 7 | 1 | 380 | 643 | 1019 | 2.40e-86 | 287 |
| MsG0680034092.01.T01 | MTR_5g047480 | 42.821 | 390 | 184 | 6 | 1 | 372 | 643 | 1011 | 8.58e-86 | 285 |
| MsG0680034092.01.T01 | MTR_6g015580 | 43.750 | 400 | 163 | 10 | 1 | 364 | 493 | 866 | 3.75e-85 | 282 |
| MsG0680034092.01.T01 | MTR_6g015580 | 43.750 | 400 | 163 | 10 | 1 | 364 | 659 | 1032 | 2.31e-84 | 282 |
| MsG0680034092.01.T01 | MTR_8g012180 | 44.472 | 398 | 179 | 8 | 1 | 378 | 427 | 802 | 2.03e-82 | 274 |
| MsG0680034092.01.T01 | MTR_6g015590 | 59.055 | 254 | 88 | 3 | 1 | 239 | 574 | 826 | 4.27e-82 | 272 |
| MsG0680034092.01.T01 | MTR_8g011850 | 44.608 | 408 | 184 | 7 | 1 | 387 | 671 | 1057 | 5.05e-82 | 279 |
| MsG0680034092.01.T01 | MTR_8g011710 | 42.965 | 398 | 185 | 7 | 1 | 378 | 663 | 1038 | 1.89e-81 | 275 |
| MsG0680034092.01.T01 | MTR_8g012180 | 44.862 | 399 | 176 | 9 | 1 | 378 | 636 | 1011 | 2.59e-81 | 274 |
| MsG0680034092.01.T01 | MTR_0468s0010 | 44.125 | 383 | 180 | 7 | 1 | 372 | 622 | 981 | 3.76e-81 | 274 |
| MsG0680034092.01.T01 | MTR_8g012080 | 43.112 | 392 | 181 | 7 | 1 | 372 | 640 | 1009 | 1.39e-80 | 272 |
| MsG0680034092.01.T01 | MTR_3g022930 | 46.875 | 384 | 157 | 7 | 1 | 365 | 656 | 1011 | 3.32e-80 | 272 |
| MsG0680034092.01.T01 | MTR_4g014990 | 56.641 | 256 | 93 | 4 | 1 | 242 | 671 | 922 | 4.18e-80 | 269 |
| MsG0680034092.01.T01 | MTR_8g011950 | 42.157 | 408 | 182 | 9 | 1 | 392 | 642 | 1011 | 7.20e-80 | 270 |
| MsG0680034092.01.T01 | MTR_5g036240 | 44.020 | 393 | 175 | 9 | 1 | 372 | 495 | 863 | 1.18e-79 | 268 |
| MsG0680034092.01.T01 | MTR_7g025250 | 43.250 | 400 | 174 | 7 | 1 | 372 | 652 | 1026 | 2.56e-79 | 268 |
| MsG0680034092.01.T01 | MTR_8g012200 | 42.184 | 403 | 185 | 8 | 1 | 382 | 652 | 1027 | 4.30e-78 | 265 |
| MsG0680034092.01.T01 | MTR_5g071610 | 42.416 | 389 | 173 | 8 | 1 | 372 | 653 | 1007 | 3.29e-77 | 263 |
| MsG0680034092.01.T01 | MTR_6g015720 | 50.338 | 296 | 110 | 2 | 1 | 282 | 539 | 811 | 4.47e-76 | 257 |
| MsG0680034092.01.T01 | MTR_8g020430 | 42.368 | 380 | 156 | 9 | 1 | 359 | 636 | 973 | 1.07e-72 | 249 |
| MsG0680034092.01.T01 | MTR_4g023400 | 50.775 | 258 | 97 | 4 | 1 | 241 | 1153 | 1397 | 5.76e-67 | 235 |
| MsG0680034092.01.T01 | MTR_8g037235 | 41.005 | 378 | 157 | 7 | 1 | 373 | 612 | 928 | 2.30e-65 | 229 |
| MsG0680034092.01.T01 | MTR_6g015580 | 49.027 | 257 | 92 | 5 | 1 | 241 | 659 | 892 | 8.70e-58 | 206 |
| MsG0680034092.01.T01 | MTR_3g072140 | 40.476 | 378 | 177 | 10 | 2 | 373 | 499 | 834 | 6.70e-57 | 204 |
| MsG0680034092.01.T01 | MTR_4g017740 | 48.347 | 242 | 66 | 8 | 273 | 500 | 1 | 197 | 2.16e-55 | 184 |
| MsG0680034092.01.T01 | MTR_6g015750 | 67.114 | 149 | 45 | 1 | 1 | 145 | 647 | 795 | 6.81e-55 | 199 |
| MsG0680034092.01.T01 | MTR_8g011710 | 48.869 | 221 | 89 | 3 | 1 | 201 | 663 | 879 | 9.07e-53 | 192 |
| MsG0680034092.01.T01 | MTR_5g071610 | 47.200 | 250 | 89 | 5 | 1 | 234 | 653 | 875 | 1.61e-52 | 191 |
| MsG0680034092.01.T01 | MTR_5g029950 | 54.396 | 182 | 68 | 2 | 1 | 167 | 109 | 290 | 2.78e-52 | 179 |
| MsG0680034092.01.T01 | MTR_8g012180 | 49.798 | 247 | 86 | 5 | 1 | 230 | 636 | 861 | 1.47e-50 | 186 |
| MsG0680034092.01.T01 | MTR_7g025250 | 45.149 | 268 | 88 | 5 | 1 | 233 | 652 | 895 | 5.73e-48 | 178 |
| MsG0680034092.01.T01 | MTR_4g021030 | 48.315 | 178 | 47 | 4 | 273 | 450 | 1 | 133 | 8.97e-42 | 146 |
| MsG0680034092.01.T01 | MTR_6g015595 | 46.617 | 133 | 69 | 2 | 255 | 387 | 18 | 148 | 8.53e-35 | 130 |
| MsG0680034092.01.T01 | MTR_4g014580 | 52.593 | 135 | 39 | 3 | 1 | 135 | 515 | 624 | 1.90e-31 | 129 |
| MsG0680034092.01.T01 | MTR_4g014580 | 50.000 | 96 | 42 | 2 | 295 | 390 | 624 | 713 | 4.05e-21 | 97.8 |
| MsG0680034092.01.T01 | MTR_8g037220 | 29.444 | 360 | 200 | 10 | 28 | 381 | 634 | 945 | 5.98e-30 | 125 |
| MsG0680034092.01.T01 | MTR_8g037220 | 41.358 | 162 | 83 | 3 | 1 | 162 | 654 | 803 | 1.38e-24 | 108 |
| MsG0680034092.01.T01 | MTR_8g037220 | 29.444 | 360 | 200 | 10 | 28 | 381 | 413 | 724 | 6.06e-30 | 125 |
| MsG0680034092.01.T01 | MTR_8g037220 | 41.358 | 162 | 83 | 3 | 1 | 162 | 433 | 582 | 1.40e-24 | 108 |
| MsG0680034092.01.T01 | MTR_8g012120 | 60.440 | 91 | 36 | 0 | 1 | 91 | 111 | 201 | 6.17e-28 | 110 |
| MsG0680034092.01.T01 | MTR_3g104130 | 43.590 | 117 | 64 | 2 | 256 | 372 | 19 | 133 | 9.69e-27 | 107 |
| MsG0680034092.01.T01 | MTR_3g104210 | 43.590 | 117 | 64 | 2 | 256 | 372 | 19 | 133 | 9.69e-27 | 107 |
| MsG0680034092.01.T01 | MTR_6g015560 | 73.611 | 72 | 19 | 0 | 1 | 72 | 1 | 72 | 1.06e-26 | 103 |
| MsG0680034092.01.T01 | MTR_6g015765 | 44.355 | 124 | 65 | 3 | 243 | 364 | 4 | 125 | 1.82e-26 | 105 |
| MsG0680034092.01.T01 | MTR_8g012005 | 38.418 | 177 | 96 | 3 | 252 | 416 | 26 | 201 | 3.54e-26 | 108 |
| MsG0680034092.01.T01 | MTR_3g104190 | 76.056 | 71 | 17 | 0 | 1 | 71 | 29 | 99 | 4.65e-26 | 102 |
| MsG0680034092.01.T01 | MTR_3g104150 | 76.056 | 71 | 17 | 0 | 1 | 71 | 29 | 99 | 4.65e-26 | 102 |
| MsG0680034092.01.T01 | MTR_4g068200 | 39.375 | 160 | 89 | 3 | 236 | 387 | 461 | 620 | 1.04e-25 | 111 |
| MsG0680034092.01.T01 | MTR_3g104170 | 42.735 | 117 | 65 | 2 | 256 | 372 | 19 | 133 | 1.71e-25 | 103 |
| MsG0680034092.01.T01 | MTR_3g104240 | 42.735 | 117 | 65 | 2 | 256 | 372 | 19 | 133 | 1.71e-25 | 103 |
| MsG0680034092.01.T01 | MTR_3g104250 | 76.056 | 71 | 17 | 0 | 1 | 71 | 250 | 320 | 4.35e-25 | 106 |
| MsG0680034092.01.T01 | MTR_7g025250 | 72.500 | 80 | 22 | 0 | 1 | 80 | 652 | 731 | 1.15e-21 | 99.4 |
| MsG0680034092.01.T01 | MTR_2g450830 | 34.389 | 221 | 131 | 7 | 150 | 366 | 656 | 866 | 1.43e-21 | 99.4 |
| MsG0680034092.01.T01 | MTR_8g011870 | 35.088 | 171 | 103 | 4 | 252 | 416 | 125 | 293 | 1.99e-21 | 96.3 |
| MsG0680034092.01.T01 | MTR_5g029940 | 39.623 | 106 | 63 | 1 | 252 | 357 | 19 | 123 | 3.16e-20 | 88.6 |
| MsG0680034092.01.T01 | MTR_6g015450 | 43.158 | 95 | 54 | 0 | 293 | 387 | 34 | 128 | 6.78e-20 | 86.3 |
| MsG0680034092.01.T01 | MTR_6g465280 | 51.899 | 79 | 37 | 1 | 283 | 361 | 1 | 78 | 7.10e-18 | 79.7 |
| MsG0680034092.01.T01 | MTR_8g062130 | 50.000 | 92 | 46 | 0 | 4 | 95 | 672 | 763 | 5.32e-15 | 79.0 |
| MsG0680034092.01.T01 | MTR_4g021125 | 41.935 | 124 | 52 | 3 | 139 | 247 | 1 | 119 | 7.85e-15 | 72.8 |
| MsG0680034092.01.T01 | MTR_4g021125 | 70.455 | 44 | 12 | 1 | 261 | 304 | 60 | 102 | 2.24e-14 | 71.2 |
| MsG0680034092.01.T01 | MTR_6g015575 | 29.851 | 134 | 54 | 2 | 257 | 390 | 35 | 128 | 7.50e-13 | 67.4 |
| MsG0680034092.01.T01 | MTR_8g028800 | 47.312 | 93 | 48 | 1 | 1 | 93 | 654 | 745 | 1.71e-12 | 70.9 |
| MsG0680034092.01.T01 | MTR_6g015475 | 72.727 | 44 | 12 | 0 | 1 | 44 | 676 | 719 | 4.40e-12 | 69.3 |
| MsG0680034092.01.T01 | MTR_5g040460 | 44.565 | 92 | 50 | 1 | 2 | 93 | 653 | 743 | 4.97e-12 | 68.9 |
| MsG0680034092.01.T01 | MTR_8g062140 | 51.087 | 92 | 45 | 0 | 4 | 95 | 631 | 722 | 9.81e-12 | 68.2 |
| MsG0680034092.01.T01 | MTR_7g078270 | 44.086 | 93 | 51 | 1 | 1 | 93 | 87 | 178 | 1.69e-11 | 67.0 |
| MsG0680034092.01.T01 | MTR_7g078270 | 29.333 | 225 | 125 | 6 | 1 | 199 | 163 | 379 | 3.02e-11 | 66.2 |
| MsG0680034092.01.T01 | MTR_7g078780 | 43.158 | 95 | 53 | 1 | 1 | 95 | 648 | 741 | 2.78e-11 | 67.0 |
| MsG0680034092.01.T01 | MTR_8g042470 | 36.697 | 109 | 63 | 3 | 1 | 106 | 652 | 757 | 2.87e-11 | 66.6 |
| MsG0680034092.01.T01 | MTR_6g069560 | 40.860 | 93 | 53 | 1 | 1 | 93 | 640 | 730 | 2.88e-11 | 66.6 |
| MsG0680034092.01.T01 | MTR_7g078780 | 43.158 | 95 | 53 | 1 | 1 | 95 | 648 | 741 | 2.90e-11 | 66.6 |
| MsG0680034092.01.T01 | MTR_8g042470 | 36.697 | 109 | 63 | 3 | 1 | 106 | 652 | 757 | 3.13e-11 | 66.6 |
| MsG0680034092.01.T01 | MTR_2g040220 | 38.655 | 119 | 70 | 2 | 3 | 121 | 648 | 763 | 3.16e-11 | 66.6 |
| MsG0680034092.01.T01 | MTR_8g042470 | 36.364 | 110 | 64 | 3 | 1 | 107 | 652 | 758 | 3.18e-11 | 66.6 |
| MsG0680034092.01.T01 | MTR_4g014720 | 37.615 | 109 | 67 | 1 | 1 | 109 | 323 | 430 | 5.02e-11 | 65.9 |
| MsG0680034092.01.T01 | MTR_8g039910 | 42.391 | 92 | 51 | 1 | 2 | 93 | 664 | 753 | 8.08e-11 | 65.5 |
| MsG0680034092.01.T01 | MTR_8g039870 | 42.391 | 92 | 51 | 1 | 2 | 93 | 664 | 753 | 8.08e-11 | 65.5 |
| MsG0680034092.01.T01 | MTR_7g078180 | 42.105 | 95 | 54 | 1 | 1 | 95 | 649 | 742 | 8.41e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034092.01.T01 | AT5G36930 | 50.000 | 114 | 56 | 1 | 1 | 113 | 642 | 755 | 1.33e-22 | 102 |
| MsG0680034092.01.T01 | AT5G36930 | 50.000 | 114 | 56 | 1 | 1 | 113 | 642 | 755 | 1.33e-22 | 102 |
| MsG0680034092.01.T01 | AT5G36930 | 50.000 | 114 | 56 | 1 | 1 | 113 | 645 | 758 | 1.35e-22 | 102 |
| MsG0680034092.01.T01 | AT5G36930 | 50.000 | 114 | 56 | 1 | 1 | 113 | 642 | 755 | 1.45e-22 | 102 |
| MsG0680034092.01.T01 | AT1G27180 | 41.748 | 103 | 60 | 0 | 4 | 106 | 868 | 970 | 3.63e-13 | 73.2 |
| MsG0680034092.01.T01 | AT4G12010 | 41.346 | 104 | 59 | 2 | 3 | 106 | 735 | 836 | 4.31e-13 | 72.8 |
| MsG0680034092.01.T01 | AT4G12010 | 42.157 | 102 | 55 | 2 | 3 | 104 | 667 | 764 | 8.63e-12 | 68.6 |
| MsG0680034092.01.T01 | AT1G27180 | 41.748 | 103 | 60 | 0 | 4 | 106 | 704 | 806 | 4.58e-13 | 72.8 |
| MsG0680034092.01.T01 | AT1G27180 | 41.748 | 103 | 60 | 0 | 4 | 106 | 704 | 806 | 4.58e-13 | 72.8 |
| MsG0680034092.01.T01 | AT1G27180 | 41.748 | 103 | 60 | 0 | 4 | 106 | 706 | 808 | 4.99e-13 | 72.4 |
| MsG0680034092.01.T01 | AT1G27180 | 41.748 | 103 | 60 | 0 | 4 | 106 | 706 | 808 | 5.04e-13 | 72.4 |
| MsG0680034092.01.T01 | AT1G27180 | 41.748 | 103 | 60 | 0 | 4 | 106 | 530 | 632 | 6.53e-13 | 72.0 |
| MsG0680034092.01.T01 | AT1G27180 | 41.748 | 103 | 60 | 0 | 4 | 106 | 530 | 632 | 6.53e-13 | 72.0 |
| MsG0680034092.01.T01 | AT1G27180 | 41.748 | 103 | 60 | 0 | 4 | 106 | 530 | 632 | 6.53e-13 | 72.0 |
| MsG0680034092.01.T01 | AT4G19510 | 45.455 | 77 | 42 | 0 | 14 | 90 | 745 | 821 | 8.79e-13 | 71.6 |
| MsG0680034092.01.T01 | AT4G19510 | 45.455 | 77 | 42 | 0 | 14 | 90 | 735 | 811 | 9.06e-13 | 71.6 |
| MsG0680034092.01.T01 | AT4G19510 | 45.455 | 77 | 42 | 0 | 14 | 90 | 735 | 811 | 9.06e-13 | 71.6 |
| MsG0680034092.01.T01 | AT4G19510 | 45.455 | 77 | 42 | 0 | 14 | 90 | 772 | 848 | 9.48e-13 | 71.6 |
| MsG0680034092.01.T01 | AT4G19510 | 45.455 | 77 | 42 | 0 | 14 | 90 | 732 | 808 | 9.52e-13 | 71.2 |
| MsG0680034092.01.T01 | AT4G19510 | 45.455 | 77 | 42 | 0 | 14 | 90 | 745 | 821 | 9.74e-13 | 71.6 |
| MsG0680034092.01.T01 | AT4G19510 | 45.455 | 77 | 42 | 0 | 14 | 90 | 732 | 808 | 1.02e-12 | 71.6 |
| MsG0680034092.01.T01 | AT4G19510 | 45.455 | 77 | 42 | 0 | 14 | 90 | 772 | 848 | 1.08e-12 | 71.6 |
| MsG0680034092.01.T01 | AT4G19510 | 45.455 | 77 | 42 | 0 | 14 | 90 | 772 | 848 | 1.08e-12 | 71.6 |
| MsG0680034092.01.T01 | AT4G19510 | 45.455 | 77 | 42 | 0 | 14 | 90 | 772 | 848 | 1.08e-12 | 71.6 |
| MsG0680034092.01.T01 | AT1G27170 | 32.886 | 149 | 100 | 0 | 4 | 152 | 695 | 843 | 8.53e-12 | 68.6 |
| MsG0680034092.01.T01 | AT1G27170 | 32.886 | 149 | 100 | 0 | 4 | 152 | 695 | 843 | 1.02e-11 | 68.6 |
| MsG0680034092.01.T01 | AT5G17880 | 40.230 | 87 | 51 | 1 | 4 | 90 | 752 | 837 | 4.07e-11 | 66.2 |
| MsG0680034092.01.T01 | AT5G17880 | 40.230 | 87 | 51 | 1 | 4 | 90 | 752 | 837 | 4.17e-11 | 66.2 |
| MsG0680034092.01.T01 | AT5G45200 | 42.045 | 88 | 50 | 1 | 3 | 90 | 509 | 595 | 6.03e-11 | 65.9 |
| MsG0680034092.01.T01 | AT5G45200 | 42.045 | 88 | 50 | 1 | 3 | 90 | 753 | 839 | 6.30e-11 | 65.9 |
| MsG0680034092.01.T01 | AT5G44870 | 27.174 | 184 | 99 | 5 | 3 | 185 | 792 | 941 | 8.01e-11 | 65.5 |
| MsG0680034092.01.T01 | AT5G45200 | 42.045 | 88 | 50 | 1 | 3 | 90 | 753 | 839 | 8.05e-11 | 65.5 |
Find 83 sgRNAs with CRISPR-Local
Find 108 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAGAAACTTTAATTCTTTC+AGG | 0.095673 | 6:-80353188 | MsG0680034092.01.T01:CDS |
| GAGGAGGATGTTACTGTTTC+TGG | 0.147719 | 6:-80351917 | MsG0680034092.01.T01:CDS |
| AATTTATTAGAAGAAGTTTA+TGG | 0.199616 | 6:+80353267 | None:intergenic |
| CAGAATTATGCTGTCTCTTT+TGG | 0.207370 | 6:-80351644 | MsG0680034092.01.T01:CDS |
| CTAGGTCAAGTTCGCACTTC+AGG | 0.245617 | 6:-80352729 | MsG0680034092.01.T01:CDS |
| TCAAAATGTAGCAAGAGTTT+TGG | 0.266824 | 6:-80352847 | MsG0680034092.01.T01:CDS |
| TGTTCCATTTCTTTGTCAAT+TGG | 0.316417 | 6:+80351956 | None:intergenic |
| TTCATTGTTCAGACTGCAAA+TGG | 0.325835 | 6:-80352343 | MsG0680034092.01.T01:intron |
| TTCCTTCACTTATTCGCTCT+TGG | 0.333323 | 6:-80352998 | MsG0680034092.01.T01:CDS |
| TGTTGGGATATCAAATATAA+TGG | 0.344791 | 6:+80352258 | None:intergenic |
| AACCTGTAAAATGCGATCTT+TGG | 0.346033 | 6:+80352641 | None:intergenic |
| CGATATGCATGCTTCTCCTT+TGG | 0.353701 | 6:-80352763 | MsG0680034092.01.T01:CDS |
| AGTGATATCTCATTATTTGA+TGG | 0.359281 | 6:+80352969 | None:intergenic |
| GAAATCTGTCTTGATTCAAA+TGG | 0.359447 | 6:-80352691 | MsG0680034092.01.T01:CDS |
| TTCAGACTGCAAATGGGACT+TGG | 0.362741 | 6:-80352336 | MsG0680034092.01.T01:intron |
| CTTTGGCAAGACTCGGGACT+TGG | 0.382502 | 6:+80352658 | None:intergenic |
| ATGTTCCATGATCGACAAAT+TGG | 0.383203 | 6:-80353165 | MsG0680034092.01.T01:CDS |
| CGGACAACATCATACTCTTC+AGG | 0.384993 | 6:+80352221 | None:intergenic |
| AGGTTTCGCCCCTTCATTGT+TGG | 0.393452 | 6:+80352241 | None:intergenic |
| GGTTTCGCCCCTTCATTGTT+GGG | 0.393751 | 6:+80352242 | None:intergenic |
| GTCATCTCTTAGTACTTTCA+AGG | 0.397843 | 6:-80352925 | MsG0680034092.01.T01:CDS |
| GCAGTGTTCAGTTTCTTTGT+CGG | 0.402943 | 6:+80351820 | None:intergenic |
| TTTAGATCTTACTATTGAAA+AGG | 0.404396 | 6:+80353073 | None:intergenic |
| ATTTCTTTATGTGGATTTGA+AGG | 0.406191 | 6:-80353038 | MsG0680034092.01.T01:CDS |
| CTCCTCCAATTTGTCGATCA+TGG | 0.408628 | 6:+80353160 | None:intergenic |
| AAATCTGTCTTGATTCAAAT+GGG | 0.429628 | 6:-80352690 | MsG0680034092.01.T01:CDS |
| CGACAAATTGGAGGAGGACT+TGG | 0.431060 | 6:-80353153 | MsG0680034092.01.T01:CDS |
| TGAACCAATTGACAAAGAAA+TGG | 0.435462 | 6:-80351960 | MsG0680034092.01.T01:CDS |
| TTTAATTTATAGATGCTTCT+CGG | 0.439320 | 6:+80353215 | None:intergenic |
| TCACACAAAGACAAACATTC+AGG | 0.439753 | 6:-80352131 | MsG0680034092.01.T01:CDS |
| ATTGGATATATTTCTTTATG+TGG | 0.442077 | 6:-80353047 | MsG0680034092.01.T01:CDS |
| ATTTGATATCCCAACAATGA+AGG | 0.448739 | 6:-80352251 | MsG0680034092.01.T01:CDS |
| TGGTAACAAAGTGGAGGTTA+TGG | 0.471012 | 6:-80352038 | MsG0680034092.01.T01:CDS |
| CAAATATAATGGAACATCCT+TGG | 0.471524 | 6:+80352269 | None:intergenic |
| TAGGTCAAGTTCGCACTTCA+GGG | 0.473917 | 6:-80352728 | MsG0680034092.01.T01:CDS |
| AGCAGTCTTATCCGCAATCA+AGG | 0.475501 | 6:+80353109 | None:intergenic |
| CCTTTGGTTGATGATTGCCT+AGG | 0.488947 | 6:-80352747 | MsG0680034092.01.T01:CDS |
| GGAACATCCTTGGCAACTAA+AGG | 0.489734 | 6:+80352279 | None:intergenic |
| TTAGATCTTACTATTGAAAA+GGG | 0.497263 | 6:+80353074 | None:intergenic |
| ATAGTAAGATCTAAAAGCAT+TGG | 0.498901 | 6:-80353065 | MsG0680034092.01.T01:CDS |
| TCTACAGTCTCCCATAGCAT+TGG | 0.503953 | 6:-80353296 | MsG0680034092.01.T01:CDS |
| ATGCGATCTTTGGCAAGACT+CGG | 0.505185 | 6:+80352651 | None:intergenic |
| GGAGGAGGACTTGGAACAGA+TGG | 0.516310 | 6:-80353144 | MsG0680034092.01.T01:CDS |
| TATGGAGAGATCCAATGCTA+TGG | 0.521477 | 6:+80353285 | None:intergenic |
| CGAAGTCTTTGTGTGGAATG+TGG | 0.528193 | 6:-80352888 | MsG0680034092.01.T01:CDS |
| ATAACCTCCACTTTGTTACC+AGG | 0.530714 | 6:+80352040 | None:intergenic |
| TGCGATCTTTGGCAAGACTC+GGG | 0.533037 | 6:+80352652 | None:intergenic |
| CCAGTCTTCATCCTCAAAAG+AGG | 0.534482 | 6:+80352087 | None:intergenic |
| TGGGAGACTGTAGACAAACT+TGG | 0.539891 | 6:+80353305 | None:intergenic |
| CAAAGGAGAAGCATGCATAT+CGG | 0.541889 | 6:+80352764 | None:intergenic |
| GCAACTAAAGGTTGTCCACT+CGG | 0.548468 | 6:+80352291 | None:intergenic |
| CGTCATCTATTACTCTTCAC+AGG | 0.549173 | 6:-80352200 | MsG0680034092.01.T01:CDS |
| TTTGATATCCCAACAATGAA+GGG | 0.551170 | 6:-80352250 | MsG0680034092.01.T01:CDS |
| ATCATTGACAACCTTGATTG+CGG | 0.556350 | 6:-80353120 | MsG0680034092.01.T01:CDS |
| TCATTGTTCAGACTGCAAAT+GGG | 0.558076 | 6:-80352342 | MsG0680034092.01.T01:intron |
| ATGGAGAGATCCAATGCTAT+GGG | 0.561763 | 6:+80353286 | None:intergenic |
| TTCCATGATCGACAAATTGG+AGG | 0.567569 | 6:-80353162 | MsG0680034092.01.T01:CDS |
| TGGACAACCTTTAGTTGCCA+AGG | 0.568705 | 6:-80352286 | MsG0680034092.01.T01:CDS |
| TCAGACTGCAAATGGGACTT+GGG | 0.576348 | 6:-80352335 | MsG0680034092.01.T01:intron |
| GAAACTGAACACTGCAATGG+AGG | 0.583348 | 6:-80351812 | MsG0680034092.01.T01:CDS |
| TGTGAGTGTTTATCTTCACC+AGG | 0.584962 | 6:+80351719 | None:intergenic |
| AAAGCTTCGAAGTCTTTGTG+TGG | 0.594940 | 6:-80352895 | MsG0680034092.01.T01:CDS |
| ATCCAAGAGCGAATAAGTGA+AGG | 0.598610 | 6:+80352996 | None:intergenic |
| GATTAATGATCAACACACCT+TGG | 0.603191 | 6:+80352152 | None:intergenic |
| CTGCAATGGAGGAGATGAGG+AGG | 0.607733 | 6:-80351801 | MsG0680034092.01.T01:CDS |
| CATGATCGACAAATTGGAGG+AGG | 0.608109 | 6:-80353159 | MsG0680034092.01.T01:CDS |
| TCTACAACCTGGTAACAAAG+TGG | 0.609766 | 6:-80352047 | MsG0680034092.01.T01:CDS |
| CCAATAAAATTGTTATCGCA+CGG | 0.611893 | 6:+80351743 | None:intergenic |
| CTGAAGTGCGAACTTGACCT+AGG | 0.614792 | 6:+80352730 | None:intergenic |
| TGTTTCTAGTGATAATGACC+TGG | 0.615222 | 6:-80351675 | MsG0680034092.01.T01:CDS |
| GTGCAATGCAAGAGATGAGG+AGG | 0.619042 | 6:-80351933 | MsG0680034092.01.T01:CDS |
| ACACTGCAATGGAGGAGATG+AGG | 0.621023 | 6:-80351804 | MsG0680034092.01.T01:CDS |
| AAAGAAACTGAACACTGCAA+TGG | 0.624468 | 6:-80351815 | MsG0680034092.01.T01:CDS |
| CTGTGAAGAGTAATAGATGA+CGG | 0.626232 | 6:+80352201 | None:intergenic |
| GAAAGTACTAAGAGATGACA+TGG | 0.644071 | 6:+80352929 | None:intergenic |
| TTGATATCCCAACAATGAAG+GGG | 0.644438 | 6:-80352249 | MsG0680034092.01.T01:CDS |
| GAGAACGTAACTTCATCAGA+AGG | 0.644954 | 6:-80352178 | MsG0680034092.01.T01:CDS |
| ACAGTGCAATGCAAGAGATG+AGG | 0.646233 | 6:-80351936 | MsG0680034092.01.T01:CDS |
| ACTTCATCAGAAGGTTGCCA+AGG | 0.649621 | 6:-80352169 | MsG0680034092.01.T01:CDS |
| CCTAGGCAATCATCAACCAA+AGG | 0.670205 | 6:+80352747 | None:intergenic |
| TTAACATCAAATCTACAACC+TGG | 0.686459 | 6:-80352058 | MsG0680034092.01.T01:CDS |
| GGAGAAGATGAAAATGTGAG+TGG | 0.693357 | 6:-80351581 | MsG0680034092.01.T01:CDS |
| ACAACCTGGTAACAAAGTGG+AGG | 0.700438 | 6:-80352044 | MsG0680034092.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCAAATAATTTTTTTTTTCT+TGG | - | Chr6:80353334-80353353 | MsG0680034092.01.T01:CDS | 10.0% |
| !! | AAAAATAATGTTATTGTTTC+TGG | - | Chr6:80353262-80353281 | MsG0680034092.01.T01:CDS | 15.0% |
| !! | AACAATGAATAGTAATTTAA+TGG | + | Chr6:80352510-80352529 | None:intergenic | 15.0% |
| !! | AAGTAGAAATAAAAGTAAAA+TGG | + | Chr6:80352452-80352471 | None:intergenic | 15.0% |
| !! | AATTTATTAGAAGAAGTTTA+TGG | + | Chr6:80351600-80351619 | None:intergenic | 15.0% |
| !! | ATTGGATATATTTCTTTATG+TGG | - | Chr6:80351817-80351836 | MsG0680034092.01.T01:CDS | 20.0% |
| !! | TTAGATCTTACTATTGAAAA+GGG | + | Chr6:80351793-80351812 | None:intergenic | 20.0% |
| !! | TTTAGATCTTACTATTGAAA+AGG | + | Chr6:80351794-80351813 | None:intergenic | 20.0% |
| !!! | ATAACATTATTTTTATCTGC+TGG | + | Chr6:80353256-80353275 | None:intergenic | 20.0% |
| !!! | TTTAATTTATAGATGCTTCT+CGG | + | Chr6:80351652-80351671 | None:intergenic | 20.0% |
| ! | AAATCTGTCTTGATTCAAAT+GGG | - | Chr6:80352174-80352193 | MsG0680034092.01.T01:CDS | 25.0% |
| ! | AATTATGCGTGAATTAATGA+AGG | + | Chr6:80352376-80352395 | None:intergenic | 25.0% |
| ! | AGTGATATCTCATTATTTGA+TGG | + | Chr6:80351898-80351917 | None:intergenic | 25.0% |
| ! | ATCCAAAAATTGTCAGAAAA+TGG | - | Chr6:80352050-80352069 | MsG0680034092.01.T01:CDS | 25.0% |
| ! | ATTTCTTTATGTGGATTTGA+AGG | - | Chr6:80351826-80351845 | MsG0680034092.01.T01:CDS | 25.0% |
| ! | CAAATTATGTTGTCCTTAAT+TGG | - | Chr6:80352305-80352324 | MsG0680034092.01.T01:CDS | 25.0% |
| ! | CTAGAAACTTTAATTCTTTC+AGG | - | Chr6:80351676-80351695 | MsG0680034092.01.T01:CDS | 25.0% |
| ! | GTAAAATGAGTTTCCAATTA+AGG | + | Chr6:80352321-80352340 | None:intergenic | 25.0% |
| ! | TGTTGGGATATCAAATATAA+TGG | + | Chr6:80352609-80352628 | None:intergenic | 25.0% |
| !! | ACAAGCAAAGTACATTTTTA+AGG | - | Chr6:80352414-80352433 | MsG0680034092.01.T01:intron | 25.0% |
| !! | ATAGTAAGATCTAAAAGCAT+TGG | - | Chr6:80351799-80351818 | MsG0680034092.01.T01:CDS | 25.0% |
| !! | CTTTTACAAGTTTAAATACG+TGG | + | Chr6:80352261-80352280 | None:intergenic | 25.0% |
| !! | TTCCATTTTCTGACAATTTT+TGG | + | Chr6:80352055-80352074 | None:intergenic | 25.0% |
| ATTTGATATCCCAACAATGA+AGG | - | Chr6:80352613-80352632 | MsG0680034092.01.T01:intron | 30.0% | |
| CCAATAAAATTGTTATCGCA+CGG | + | Chr6:80353124-80353143 | None:intergenic | 30.0% | |
| GAAATCTGTCTTGATTCAAA+TGG | - | Chr6:80352173-80352192 | MsG0680034092.01.T01:CDS | 30.0% | |
| TGAACCAATTGACAAAGAAA+TGG | - | Chr6:80352904-80352923 | MsG0680034092.01.T01:CDS | 30.0% | |
| TGTTCCATTTCTTTGTCAAT+TGG | + | Chr6:80352911-80352930 | None:intergenic | 30.0% | |
| TTAACATCAAATCTACAACC+TGG | - | Chr6:80352806-80352825 | MsG0680034092.01.T01:CDS | 30.0% | |
| TTTGATATCCCAACAATGAA+GGG | - | Chr6:80352614-80352633 | MsG0680034092.01.T01:intron | 30.0% | |
| ! | CAAATATAATGGAACATCCT+TGG | + | Chr6:80352598-80352617 | None:intergenic | 30.0% |
| ! | GATAACAATTTTATTGGTCC+TGG | - | Chr6:80353127-80353146 | MsG0680034092.01.T01:CDS | 30.0% |
| ! | TCAAAATGTAGCAAGAGTTT+TGG | - | Chr6:80352017-80352036 | MsG0680034092.01.T01:CDS | 30.0% |
| AAAGAAACTGAACACTGCAA+TGG | - | Chr6:80353049-80353068 | MsG0680034092.01.T01:CDS | 35.0% | |
| AACCTGTAAAATGCGATCTT+TGG | + | Chr6:80352226-80352245 | None:intergenic | 35.0% | |
| ATCATTGACAACCTTGATTG+CGG | - | Chr6:80351744-80351763 | MsG0680034092.01.T01:CDS | 35.0% | |
| ATGTTCCATGATCGACAAAT+TGG | - | Chr6:80351699-80351718 | MsG0680034092.01.T01:CDS | 35.0% | |
| CTGTGAAGAGTAATAGATGA+CGG | + | Chr6:80352666-80352685 | None:intergenic | 35.0% | |
| GATTAATGATCAACACACCT+TGG | + | Chr6:80352715-80352734 | None:intergenic | 35.0% | |
| GTCATCTCTTAGTACTTTCA+AGG | - | Chr6:80351939-80351958 | MsG0680034092.01.T01:CDS | 35.0% | |
| TCACACAAAGACAAACATTC+AGG | - | Chr6:80352733-80352752 | MsG0680034092.01.T01:CDS | 35.0% | |
| TCATTGTTCAGACTGCAAAT+GGG | - | Chr6:80352522-80352541 | MsG0680034092.01.T01:intron | 35.0% | |
| TTCATTGTTCAGACTGCAAA+TGG | - | Chr6:80352521-80352540 | MsG0680034092.01.T01:intron | 35.0% | |
| TTGATATCCCAACAATGAAG+GGG | - | Chr6:80352615-80352634 | MsG0680034092.01.T01:intron | 35.0% | |
| ! | AATTATGCTGTCTCTTTTGG+CGG | - | Chr6:80353223-80353242 | MsG0680034092.01.T01:CDS | 35.0% |
| ! | CAGAATTATGCTGTCTCTTT+TGG | - | Chr6:80353220-80353239 | MsG0680034092.01.T01:CDS | 35.0% |
| ! | CATAATTCTGATTTTCTGCC+AGG | + | Chr6:80353210-80353229 | None:intergenic | 35.0% |
| ! | CCGTGCGATAACAATTTTAT+TGG | - | Chr6:80353121-80353140 | MsG0680034092.01.T01:CDS | 35.0% |
| ! | GGCTAGTGTATCTCTTTTAT+AGG | + | Chr6:80352759-80352778 | None:intergenic | 35.0% |
| !! | GAAAGTACTAAGAGATGACA+TGG | + | Chr6:80351938-80351957 | None:intergenic | 35.0% |
| !! | TGTTTCTAGTGATAATGACC+TGG | - | Chr6:80353189-80353208 | MsG0680034092.01.T01:CDS | 35.0% |
| AAAGCTTCGAAGTCTTTGTG+TGG | - | Chr6:80351969-80351988 | MsG0680034092.01.T01:CDS | 40.0% | |
| ATAACCTCCACTTTGTTACC+AGG | + | Chr6:80352827-80352846 | None:intergenic | 40.0% | |
| ATCCAAGAGCGAATAAGTGA+AGG | + | Chr6:80351871-80351890 | None:intergenic | 40.0% | |
| ATGGAGAGATCCAATGCTAT+GGG | + | Chr6:80351581-80351600 | None:intergenic | 40.0% | |
| CGTCATCTATTACTCTTCAC+AGG | - | Chr6:80352664-80352683 | MsG0680034092.01.T01:CDS | 40.0% | |
| GAGAACGTAACTTCATCAGA+AGG | - | Chr6:80352686-80352705 | MsG0680034092.01.T01:CDS | 40.0% | |
| GCAGTGTTCAGTTTCTTTGT+CGG | + | Chr6:80353047-80353066 | None:intergenic | 40.0% | |
| GGAGAAGATGAAAATGTGAG+TGG | - | Chr6:80353283-80353302 | MsG0680034092.01.T01:CDS | 40.0% | |
| TATGGAGAGATCCAATGCTA+TGG | + | Chr6:80351582-80351601 | None:intergenic | 40.0% | |
| TCTACAACCTGGTAACAAAG+TGG | - | Chr6:80352817-80352836 | MsG0680034092.01.T01:CDS | 40.0% | |
| TGGTAACAAAGTGGAGGTTA+TGG | - | Chr6:80352826-80352845 | MsG0680034092.01.T01:CDS | 40.0% | |
| TGTGAGTGTTTATCTTCACC+AGG | + | Chr6:80353148-80353167 | None:intergenic | 40.0% | |
| TTCCATGATCGACAAATTGG+AGG | - | Chr6:80351702-80351721 | MsG0680034092.01.T01:CDS | 40.0% | |
| TTCCTTCACTTATTCGCTCT+TGG | - | Chr6:80351866-80351885 | MsG0680034092.01.T01:CDS | 40.0% | |
| ! | CAAAGGAGAAGCATGCATAT+CGG | + | Chr6:80352103-80352122 | None:intergenic | 40.0% |
| ! | TGCCAAAGATCGCATTTTAC+AGG | - | Chr6:80352221-80352240 | MsG0680034092.01.T01:CDS | 40.0% |
| ! | TTTTGCTCAATAGTTCCGAG+TGG | - | Chr6:80352558-80352577 | MsG0680034092.01.T01:intron | 40.0% |
| !! | AGATACACTAGCCTCTTTTG+AGG | - | Chr6:80352766-80352785 | MsG0680034092.01.T01:CDS | 40.0% |
| !!! | AGCACTAGCTTTTCGAGATT+AGG | + | Chr6:80351529-80351548 | None:intergenic | 40.0% |
| !!! | TGGAGGTTATGGCTGTTTTT+CGG | - | Chr6:80352837-80352856 | MsG0680034092.01.T01:CDS | 40.0% |
| ACAACCTGGTAACAAAGTGG+AGG | - | Chr6:80352820-80352839 | MsG0680034092.01.T01:CDS | 45.0% | |
| ACAGTGCAATGCAAGAGATG+AGG | - | Chr6:80352928-80352947 | MsG0680034092.01.T01:CDS | 45.0% | |
| ACTTCATCAGAAGGTTGCCA+AGG | - | Chr6:80352695-80352714 | MsG0680034092.01.T01:CDS | 45.0% | |
| ATGCGATCTTTGGCAAGACT+CGG | + | Chr6:80352216-80352235 | None:intergenic | 45.0% | |
| CATGATCGACAAATTGGAGG+AGG | - | Chr6:80351705-80351724 | MsG0680034092.01.T01:CDS | 45.0% | |
| CCAGTCTTCATCCTCAAAAG+AGG | + | Chr6:80352780-80352799 | None:intergenic | 45.0% | |
| CCTAGGCAATCATCAACCAA+AGG | + | Chr6:80352120-80352139 | None:intergenic | 45.0% | |
| CGAAGTCTTTGTGTGGAATG+TGG | - | Chr6:80351976-80351995 | MsG0680034092.01.T01:CDS | 45.0% | |
| CGATATGCATGCTTCTCCTT+TGG | - | Chr6:80352101-80352120 | MsG0680034092.01.T01:CDS | 45.0% | |
| CGGACAACATCATACTCTTC+AGG | + | Chr6:80352646-80352665 | None:intergenic | 45.0% | |
| CTCCTCCAATTTGTCGATCA+TGG | + | Chr6:80351707-80351726 | None:intergenic | 45.0% | |
| GAAACTGAACACTGCAATGG+AGG | - | Chr6:80353052-80353071 | MsG0680034092.01.T01:CDS | 45.0% | |
| GAGGAGGATGTTACTGTTTC+TGG | - | Chr6:80352947-80352966 | MsG0680034092.01.T01:CDS | 45.0% | |
| GCAACTAAAGGTTGTCCACT+CGG | + | Chr6:80352576-80352595 | None:intergenic | 45.0% | |
| GGAACATCCTTGGCAACTAA+AGG | + | Chr6:80352588-80352607 | None:intergenic | 45.0% | |
| TAGGTCAAGTTCGCACTTCA+GGG | - | Chr6:80352136-80352155 | MsG0680034092.01.T01:CDS | 45.0% | |
| TCAGACTGCAAATGGGACTT+GGG | - | Chr6:80352529-80352548 | MsG0680034092.01.T01:intron | 45.0% | |
| TCTACAGTCTCCCATAGCAT+TGG | - | Chr6:80351568-80351587 | MsG0680034092.01.T01:CDS | 45.0% | |
| TGGACAACCTTTAGTTGCCA+AGG | - | Chr6:80352578-80352597 | MsG0680034092.01.T01:intron | 45.0% | |
| TGGGAGACTGTAGACAAACT+TGG | + | Chr6:80351562-80351581 | None:intergenic | 45.0% | |
| TTCAGACTGCAAATGGGACT+TGG | - | Chr6:80352528-80352547 | MsG0680034092.01.T01:intron | 45.0% | |
| ! | AGCAGTCTTATCCGCAATCA+AGG | + | Chr6:80351758-80351777 | None:intergenic | 45.0% |
| !! | CCTCTTTTGAGGATGAAGAC+TGG | - | Chr6:80352777-80352796 | MsG0680034092.01.T01:CDS | 45.0% |
| !! | CCTTTGGTTGATGATTGCCT+AGG | - | Chr6:80352117-80352136 | MsG0680034092.01.T01:CDS | 45.0% |
| !!! | GGAGGTTATGGCTGTTTTTC+GGG | - | Chr6:80352838-80352857 | MsG0680034092.01.T01:CDS | 45.0% |
| !!! | GTTATGGCTGTTTTTCGGGA+AGG | - | Chr6:80352842-80352861 | MsG0680034092.01.T01:CDS | 45.0% |
| ACACTGCAATGGAGGAGATG+AGG | - | Chr6:80353060-80353079 | MsG0680034092.01.T01:CDS | 50.0% | |
| AGGTTTCGCCCCTTCATTGT+TGG | + | Chr6:80352626-80352645 | None:intergenic | 50.0% | |
| CGACAAATTGGAGGAGGACT+TGG | - | Chr6:80351711-80351730 | MsG0680034092.01.T01:CDS | 50.0% | |
| CTAGGTCAAGTTCGCACTTC+AGG | - | Chr6:80352135-80352154 | MsG0680034092.01.T01:CDS | 50.0% | |
| CTGAAGTGCGAACTTGACCT+AGG | + | Chr6:80352137-80352156 | None:intergenic | 50.0% | |
| GGTTTCGCCCCTTCATTGTT+GGG | + | Chr6:80352625-80352644 | None:intergenic | 50.0% | |
| GTGCAATGCAAGAGATGAGG+AGG | - | Chr6:80352931-80352950 | MsG0680034092.01.T01:CDS | 50.0% | |
| TGCGATCTTTGGCAAGACTC+GGG | + | Chr6:80352215-80352234 | None:intergenic | 50.0% | |
| CTGCAATGGAGGAGATGAGG+AGG | - | Chr6:80353063-80353082 | MsG0680034092.01.T01:CDS | 55.0% | |
| CTTTGGCAAGACTCGGGACT+TGG | + | Chr6:80352209-80352228 | None:intergenic | 55.0% | |
| GGAGGAGGACTTGGAACAGA+TGG | - | Chr6:80351720-80351739 | MsG0680034092.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 80351523 | 80353363 | 80351523 | ID=MsG0680034092.01;Name=MsG0680034092.01 |
| Chr6 | mRNA | 80351523 | 80353363 | 80351523 | ID=MsG0680034092.01.T01;Parent=MsG0680034092.01;Name=MsG0680034092.01.T01;_AED=0.44;_eAED=0.45;_QI=0|0.5|0|0.66|1|0.66|3|0|516 |
| Chr6 | exon | 80352644 | 80353363 | 80352644 | ID=MsG0680034092.01.T01:exon:8352;Parent=MsG0680034092.01.T01 |
| Chr6 | exon | 80351523 | 80352353 | 80351523 | ID=MsG0680034092.01.T01:exon:8353;Parent=MsG0680034092.01.T01 |
| Chr6 | CDS | 80352644 | 80353363 | 80352644 | ID=MsG0680034092.01.T01:cds;Parent=MsG0680034092.01.T01 |
| Chr6 | CDS | 80351523 | 80352353 | 80351523 | ID=MsG0680034092.01.T01:cds;Parent=MsG0680034092.01.T01 |
| Gene Sequence |
| Protein sequence |
