Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036260.01.T01 | AFC88126.1 | 57.028 | 249 | 92 | 5 | 150 | 395 | 70 | 306 | 1.23E-92 | 291 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036260.01.T01 | P21226 | 56.911 | 246 | 91 | 5 | 153 | 395 | 72 | 305 | 4.75E-91 | 280 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036260.01.T01 | H9CDX2 | 57.028 | 249 | 92 | 5 | 150 | 395 | 70 | 306 | 5.89e-93 | 291 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0180000489.01 | MsG0780036260.01 | -0.802433 | 5.623886e-49 | 2.754585e-46 |
| MsG0180000599.01 | MsG0780036260.01 | -0.830387 | 3.021462e-55 | 3.178699e-52 |
| MsG0180002700.01 | MsG0780036260.01 | -0.829811 | 4.177787e-55 | 4.323432e-52 |
| MsG0180005059.01 | MsG0780036260.01 | 0.864951 | 8.397783e-65 | 2.685029e-61 |
| MsG0180005060.01 | MsG0780036260.01 | 0.827202 | 1.782514e-54 | 1.709126e-51 |
| MsG0180005082.01 | MsG0780036260.01 | 0.876309 | 1.547149e-68 | 7.464777e-65 |
| MsG0180005130.01 | MsG0780036260.01 | 0.882977 | 6.621090e-71 | 4.119940e-67 |
| MsG0180005143.01 | MsG0780036260.01 | 0.879759 | 9.582375e-70 | 5.259371e-66 |
| MsG0180006253.01 | MsG0780036260.01 | 0.830855 | 2.321765e-55 | 2.476352e-52 |
| MsG0280010569.01 | MsG0780036260.01 | -0.802278 | 6.052030e-49 | 2.952588e-46 |
| MsG0280010623.01 | MsG0780036260.01 | 0.825999 | 3.450787e-54 | 3.196125e-51 |
| MsG0280010926.01 | MsG0780036260.01 | -0.803108 | 4.080775e-49 | 2.033266e-46 |
| MsG0280011073.01 | MsG0780036260.01 | -0.816245 | 6.108591e-52 | 4.305777e-49 |
| MsG0280011110.01 | MsG0780036260.01 | 0.841604 | 4.295786e-58 | 6.345330e-55 |
| MsG0380013212.01 | MsG0780036260.01 | 0.843975 | 1.006529e-58 | 1.601563e-55 |
| MsG0380013213.01 | MsG0780036260.01 | 0.855449 | 6.262661e-62 | 1.446447e-58 |
| MsG0680032413.01 | MsG0780036260.01 | -0.824954 | 6.101628e-54 | 5.485669e-51 |
| MsG0680034391.01 | MsG0780036260.01 | 0.809023 | 2.321959e-50 | 1.348216e-47 |
| MsG0680034981.01 | MsG0780036260.01 | 0.828339 | 9.497497e-55 | 9.412479e-52 |
| MsG0480018617.01 | MsG0780036260.01 | 0.823763 | 1.162820e-53 | 1.010572e-50 |
| MsG0480018692.01 | MsG0780036260.01 | 0.826726 | 2.315871e-54 | 2.189698e-51 |
| MsG0480018693.01 | MsG0780036260.01 | 0.814743 | 1.318803e-51 | 8.922046e-49 |
| MsG0480018697.01 | MsG0780036260.01 | 0.825549 | 4.411305e-54 | 4.033537e-51 |
| MsG0480019322.01 | MsG0780036260.01 | 0.828799 | 7.354982e-55 | 7.387239e-52 |
| MsG0480019325.01 | MsG0780036260.01 | 0.803346 | 3.642618e-49 | 1.826094e-46 |
| MsG0480020285.01 | MsG0780036260.01 | 0.827818 | 1.268019e-54 | 1.237671e-51 |
| MsG0480020797.01 | MsG0780036260.01 | 0.800095 | 1.692272e-48 | 7.811456e-46 |
| MsG0480021063.01 | MsG0780036260.01 | 0.814218 | 1.722756e-51 | 1.149054e-48 |
| MsG0480021091.01 | MsG0780036260.01 | 0.861535 | 9.581387e-64 | 2.720351e-60 |
| MsG0480022239.01 | MsG0780036260.01 | -0.816868 | 4.428996e-52 | 3.175592e-49 |
| MsG0480022240.01 | MsG0780036260.01 | -0.801661 | 8.102605e-49 | 3.891287e-46 |
| MsG0480022537.01 | MsG0780036260.01 | -0.815001 | 1.155771e-51 | 7.874158e-49 |
| MsG0480022918.01 | MsG0780036260.01 | -0.802379 | 5.768792e-49 | 2.821772e-46 |
| MsG0580024535.01 | MsG0780036260.01 | 0.854195 | 1.447117e-61 | 3.206648e-58 |
| MsG0580024782.01 | MsG0780036260.01 | 0.808448 | 3.081136e-50 | 1.762286e-47 |
| MsG0580025024.01 | MsG0780036260.01 | 0.832061 | 1.171523e-55 | 1.294970e-52 |
| MsG0580025906.01 | MsG0780036260.01 | -0.802410 | 5.685773e-49 | 2.783255e-46 |
| MsG0380015438.01 | MsG0780036260.01 | -0.803241 | 3.829636e-49 | 1.914731e-46 |
| MsG0380016194.01 | MsG0780036260.01 | -0.827818 | 1.268008e-54 | 1.237662e-51 |
| MsG0380017033.01 | MsG0780036260.01 | -0.807945 | 3.944852e-50 | 2.226419e-47 |
| MsG0380017200.01 | MsG0780036260.01 | 0.803220 | 3.868126e-49 | 1.932933e-46 |
| MsG0380017338.01 | MsG0780036260.01 | -0.823594 | 1.273185e-53 | 1.101133e-50 |
| MsG0580027899.01 | MsG0780036260.01 | -0.800160 | 1.642000e-48 | 7.591461e-46 |
| MsG0580028208.01 | MsG0780036260.01 | -0.815556 | 8.702912e-52 | 6.019663e-49 |
| MsG0580029389.01 | MsG0780036260.01 | -0.816126 | 6.493995e-52 | 4.562451e-49 |
| MsG0680030680.01 | MsG0780036260.01 | -0.841595 | 4.319052e-58 | 6.377805e-55 |
| MsG0280006553.01 | MsG0780036260.01 | -0.810004 | 1.429670e-50 | 8.520857e-48 |
| MsG0280007513.01 | MsG0780036260.01 | 0.898803 | 3.708485e-77 | 4.456970e-73 |
| MsG0280007689.01 | MsG0780036260.01 | 0.830411 | 2.982413e-55 | 3.139742e-52 |
| MsG0280007910.01 | MsG0780036260.01 | 0.809879 | 1.520837e-50 | 9.034296e-48 |
| MsG0280008098.01 | MsG0780036260.01 | -0.808897 | 2.470643e-50 | 1.429692e-47 |
| MsG0280008419.01 | MsG0780036260.01 | -0.826789 | 2.237346e-54 | 2.119309e-51 |
| MsG0280009435.01 | MsG0780036260.01 | -0.801723 | 7.869963e-49 | 3.785433e-46 |
| MsG0280009436.01 | MsG0780036260.01 | -0.800243 | 1.579382e-48 | 7.317641e-46 |
| MsG0280009756.01 | MsG0780036260.01 | -0.803457 | 3.453955e-49 | 1.736557e-46 |
| MsG0680035664.01 | MsG0780036260.01 | -0.809249 | 2.077776e-50 | 1.213809e-47 |
| MsG0780036259.01 | MsG0780036260.01 | 0.831205 | 1.904630e-55 | 2.052530e-52 |
| MsG0780036260.01 | MsG0780036835.01 | 0.835170 | 1.960694e-56 | 2.378433e-53 |
| MsG0780036260.01 | MsG0780037052.01 | 0.816424 | 5.570823e-52 | 3.945681e-49 |
| MsG0780036260.01 | MsG0780038318.01 | 0.817497 | 3.197893e-52 | 2.332740e-49 |
| MsG0780036260.01 | MsG0780039686.01 | 0.866333 | 3.078288e-65 | 1.033725e-61 |
| MsG0780036260.01 | MsG0780040278.01 | -0.824042 | 9.998735e-54 | 8.756678e-51 |
| MsG0780036260.01 | MsG0780041004.01 | -0.820853 | 5.507266e-53 | 4.408310e-50 |
| MsG0780036260.01 | MsG0780041159.01 | -0.817986 | 2.480658e-52 | 1.833850e-49 |
| MsG0780036260.01 | MsG0880042086.01 | -0.811799 | 5.843646e-51 | 3.651829e-48 |
| MsG0780036260.01 | MsG0880042256.01 | -0.822394 | 2.425817e-53 | 2.028007e-50 |
| MsG0780036260.01 | MsG0880042416.01 | -0.815509 | 8.913123e-52 | 6.157425e-49 |
| MsG0780036260.01 | MsG0880042417.01 | -0.805642 | 1.209601e-49 | 6.433139e-47 |
| MsG0780036260.01 | MsG0880042728.01 | 0.824347 | 8.478957e-54 | 7.490291e-51 |
| MsG0780036260.01 | MsG0880042876.01 | -0.858918 | 5.920880e-63 | 1.536098e-59 |
| MsG0780036260.01 | MsG0880043107.01 | -0.831064 | 2.062585e-55 | 2.213641e-52 |
| MsG0780036260.01 | MsG0880043621.01 | -0.811723 | 6.070070e-51 | 3.785830e-48 |
| MsG0780036260.01 | MsG0880044001.01 | 0.800403 | 1.464933e-48 | 6.815216e-46 |
| MsG0780036260.01 | MsG0880044538.01 | -0.801574 | 8.442767e-49 | 4.045853e-46 |
| MsG0780036260.01 | MsG0880046408.01 | -0.808461 | 3.061934e-50 | 1.751865e-47 |
| MsG0780036260.01 | MsG0880046434.01 | 0.888904 | 3.901468e-73 | 3.080088e-69 |
| MsG0780036260.01 | MsG0880046946.01 | 0.842206 | 2.978268e-58 | 4.482617e-55 |
| MsG0780036260.01 | MsG0880047312.01 | 0.841581 | 4.356295e-58 | 6.429707e-55 |
| MsG0780036260.01 | MsG0880047460.01 | 0.833168 | 6.225987e-56 | 7.112641e-53 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036260.01.T01 | MTR_3g118390 | 57.895 | 247 | 90 | 4 | 152 | 395 | 129 | 364 | 1.04e-94 | 289 |
| MsG0780036260.01.T01 | MTR_8g074350 | 49.393 | 247 | 110 | 5 | 152 | 395 | 83 | 317 | 4.35e-78 | 244 |
| MsG0780036260.01.T01 | MTR_8g074330 | 48.133 | 241 | 110 | 5 | 158 | 395 | 89 | 317 | 5.07e-75 | 236 |
| MsG0780036260.01.T01 | MTR_8g074335 | 44.215 | 242 | 107 | 5 | 158 | 396 | 91 | 307 | 1.13e-63 | 207 |
| MsG0780036260.01.T01 | MTR_7g110780 | 40.316 | 253 | 125 | 8 | 152 | 395 | 39 | 274 | 1.11e-57 | 190 |
| MsG0780036260.01.T01 | MTR_2g034680 | 33.617 | 235 | 140 | 5 | 157 | 384 | 64 | 289 | 3.77e-37 | 137 |
| MsG0780036260.01.T01 | MTR_2g099465 | 32.422 | 256 | 128 | 8 | 139 | 391 | 41 | 254 | 1.77e-36 | 134 |
| MsG0780036260.01.T01 | MTR_2g099470 | 33.712 | 264 | 127 | 10 | 131 | 391 | 64 | 282 | 2.44e-35 | 131 |
| MsG0780036260.01.T01 | MTR_1g105535 | 31.837 | 245 | 149 | 7 | 147 | 384 | 62 | 295 | 3.16e-34 | 129 |
| MsG0780036260.01.T01 | MTR_7g021640 | 31.197 | 234 | 144 | 6 | 158 | 384 | 69 | 292 | 4.36e-32 | 124 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036260.01.T01 | AT3G12500 | 52.400 | 250 | 101 | 5 | 152 | 396 | 89 | 325 | 3.12e-86 | 266 |
| MsG0780036260.01.T01 | AT4G01700 | 42.041 | 245 | 121 | 7 | 158 | 395 | 47 | 277 | 3.50e-63 | 204 |
| MsG0780036260.01.T01 | AT1G02360 | 40.149 | 269 | 140 | 6 | 134 | 395 | 15 | 269 | 5.03e-62 | 201 |
| MsG0780036260.01.T01 | AT1G02360 | 40.149 | 269 | 140 | 6 | 134 | 395 | 67 | 321 | 2.46e-61 | 201 |
| MsG0780036260.01.T01 | AT1G02360 | 40.149 | 269 | 140 | 6 | 134 | 395 | 61 | 315 | 2.52e-61 | 201 |
| MsG0780036260.01.T01 | AT2G43590 | 32.129 | 249 | 119 | 9 | 137 | 383 | 56 | 256 | 1.46e-36 | 134 |
| MsG0780036260.01.T01 | AT3G54420 | 33.203 | 256 | 127 | 8 | 138 | 391 | 60 | 273 | 1.92e-35 | 132 |
| MsG0780036260.01.T01 | AT1G05850 | 31.356 | 236 | 145 | 6 | 153 | 381 | 64 | 289 | 7.16e-35 | 131 |
| MsG0780036260.01.T01 | AT1G05850 | 31.356 | 236 | 145 | 6 | 153 | 381 | 64 | 289 | 7.16e-35 | 131 |
| MsG0780036260.01.T01 | AT3G16920 | 31.197 | 234 | 145 | 5 | 158 | 384 | 77 | 301 | 4.15e-34 | 129 |
| MsG0780036260.01.T01 | AT2G43570 | 34.025 | 241 | 103 | 9 | 158 | 391 | 86 | 277 | 9.09e-34 | 127 |
| MsG0780036260.01.T01 | AT3G16920 | 31.197 | 234 | 145 | 5 | 158 | 384 | 101 | 325 | 1.42e-33 | 129 |
| MsG0780036260.01.T01 | AT2G43580 | 34.756 | 164 | 90 | 5 | 142 | 303 | 62 | 210 | 1.33e-31 | 121 |
| MsG0780036260.01.T01 | AT2G43610 | 39.227 | 181 | 92 | 6 | 124 | 302 | 61 | 225 | 4.13e-31 | 120 |
| MsG0780036260.01.T01 | AT2G43620 | 37.838 | 185 | 96 | 5 | 119 | 302 | 61 | 227 | 5.03e-31 | 120 |
| MsG0780036260.01.T01 | AT1G56680 | 36.872 | 179 | 95 | 7 | 128 | 305 | 64 | 225 | 5.54e-27 | 109 |
| MsG0780036260.01.T01 | AT1G56680 | 36.872 | 179 | 95 | 7 | 128 | 305 | 87 | 248 | 8.56e-27 | 109 |
| MsG0780036260.01.T01 | AT2G43600 | 39.355 | 155 | 74 | 7 | 150 | 302 | 102 | 238 | 4.54e-23 | 98.6 |
| MsG0780036260.01.T01 | AT2G43600 | 39.355 | 155 | 74 | 7 | 150 | 302 | 81 | 217 | 5.44e-23 | 97.8 |
| MsG0780036260.01.T01 | AT3G47540 | 24.473 | 237 | 115 | 11 | 158 | 391 | 39 | 214 | 4.81e-14 | 71.2 |
Find 138 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAGAGTGCTTTATGGTTT+TGG | 0.185971 | 7:+5496441 | MsG0780036260.01.T01:CDS |
| GCACTCTTGAAGGATATAAT+TGG | 0.206068 | 7:-5496428 | None:intergenic |
| TATCCTTCAAGAGTGCTTTA+TGG | 0.208128 | 7:+5496435 | MsG0780036260.01.T01:CDS |
| AATCTATGTTTCCAGTTATC+TGG | 0.221981 | 7:-5496340 | None:intergenic |
| GGTGGAGAAGGAGGTGGAGG+AGG | 0.250499 | 7:-5495897 | None:intergenic |
| GGAGAAGGAGGTGGAGGAGG+GGG | 0.273044 | 7:-5495894 | None:intergenic |
| GAAGGAGGAGGTGGAGAAGG+GGG | 0.299752 | 7:-5495804 | None:intergenic |
| GGAGAAGGAGGTGGAGGAGA+AGG | 0.300000 | 7:-5495852 | None:intergenic |
| GGAGAAGGAGGTGGAGGAGA+AGG | 0.300000 | 7:-5495924 | None:intergenic |
| GAAGGAGGTGGAGGAGAAGG+GGG | 0.301420 | 7:-5495849 | None:intergenic |
| GAAGGAGGTGGAGGAGAAGG+GGG | 0.301420 | 7:-5495921 | None:intergenic |
| AGAAGGAGGAGGTGGAGAAG+GGG | 0.311010 | 7:-5495805 | None:intergenic |
| AGAAGGAGGTGGAGGAGAAG+GGG | 0.317057 | 7:-5495850 | None:intergenic |
| AGAAGGAGGTGGAGGAGAAG+GGG | 0.317057 | 7:-5495922 | None:intergenic |
| GGAGGTGGAGAAGGAGGTGG+AGG | 0.323182 | 7:-5495900 | None:intergenic |
| ACCGAACTTGGGGAAGGTTT+TGG | 0.324729 | 7:-5496111 | None:intergenic |
| GGAGAAGGAGAAGGAGGAGG+GGG | 0.325667 | 7:-5495873 | None:intergenic |
| GGAGAAGGAGAAGGAGGAGG+GGG | 0.325667 | 7:-5495945 | None:intergenic |
| GGAGGAGGAGAAGGAGAAGG+AGG | 0.327660 | 7:-5495783 | None:intergenic |
| GGAGGTGGAGAAGGAGGTGG+AGG | 0.333161 | 7:-5495828 | None:intergenic |
| GAGAAGGAGGTGGAGGAGAA+GGG | 0.335710 | 7:-5495851 | None:intergenic |
| GAGAAGGAGGTGGAGGAGAA+GGG | 0.335710 | 7:-5495923 | None:intergenic |
| GAAGGAGGTGGAGGAGAAGG+GGG | 0.340830 | 7:-5495753 | None:intergenic |
| GGAGAAGGAGGTGGAGGAGA+AGG | 0.343175 | 7:-5495756 | None:intergenic |
| TGGAGAAGGAGGTGGAGGAG+GGG | 0.343218 | 7:-5495895 | None:intergenic |
| AGAAGGAGGTGGAGGAGAAG+GGG | 0.353336 | 7:-5495754 | None:intergenic |
| GGGGAGAAGGAGAAGGAGGA+GGG | 0.355021 | 7:-5495875 | None:intergenic |
| GGGGAGAAGGAGAAGGAGGA+GGG | 0.355021 | 7:-5495947 | None:intergenic |
| ATGAAGTTATGGCTGGAATA+TGG | 0.358475 | 7:+5496510 | MsG0780036260.01.T01:CDS |
| GGAGAAGGAGGAGGTGGAGA+AGG | 0.359221 | 7:-5495807 | None:intergenic |
| GGGAGAAGGAGAAGGAGGAG+GGG | 0.360042 | 7:-5495874 | None:intergenic |
| GGGAGAAGGAGAAGGAGGAG+GGG | 0.360042 | 7:-5495946 | None:intergenic |
| GGAGAAGGAGGAGGTGGAGA+AGG | 0.361976 | 7:-5495771 | None:intergenic |
| GGAGAAGGAGAAGGAGGAGG+TGG | 0.367053 | 7:-5495777 | None:intergenic |
| GGTGCTTGGCGGGTCGAGAT+AGG | 0.370143 | 7:+5495622 | MsG0780036260.01.T01:CDS |
| GGAGAAGGAGGTGGAGGAGA+AGG | 0.375084 | 7:-5495822 | None:intergenic |
| GGAGGAGAAGGAGAAGGAGG+AGG | 0.378273 | 7:-5495780 | None:intergenic |
| GTGGAGAAGGAGGTGGAGGA+GGG | 0.382020 | 7:-5495896 | None:intergenic |
| AGTACCTACATTACCGAACT+TGG | 0.383717 | 7:-5496123 | None:intergenic |
| ATAGTACTACTAATTATAAT+AGG | 0.386077 | 7:+5495588 | MsG0780036260.01.T01:CDS |
| AGGGGTCCATTCCAGATAAC+TGG | 0.388340 | 7:+5496329 | MsG0780036260.01.T01:CDS |
| GAGAAGGAGGAGGTGGAGAA+GGG | 0.392207 | 7:-5495806 | None:intergenic |
| GGTGGAGGAGAAGGAGGAGG+TGG | 0.395791 | 7:-5495813 | None:intergenic |
| TACTACAAATTCAAAGAAAT+CGG | 0.399460 | 7:+5496142 | MsG0780036260.01.T01:CDS |
| GAGAAGGAGGTGGAGGAGAA+GGG | 0.399675 | 7:-5495755 | None:intergenic |
| GGGTCAGTGGCAACAAGGTC+TGG | 0.410481 | 7:-5496407 | None:intergenic |
| GGAGGTGGAGAAGGAGGTGG+AGG | 0.414765 | 7:-5495762 | None:intergenic |
| AAACCATAAAGCACTCTTGA+AGG | 0.417998 | 7:-5496438 | None:intergenic |
| ATATTCCAGCCATAACTTCA+TGG | 0.424648 | 7:-5496508 | None:intergenic |
| GAAGGAGGTGGAGGAGAAGG+AGG | 0.426671 | 7:-5495819 | None:intergenic |
| GGAAGATGTGGACGTGCAAT+AGG | 0.428014 | 7:+5496365 | MsG0780036260.01.T01:CDS |
| GGAGGAGGTGGAGAAGGAGG+TGG | 0.429509 | 7:-5495765 | None:intergenic |
| AACTGAAGGACCTTACGATT+GGG | 0.431682 | 7:+5496214 | MsG0780036260.01.T01:CDS |
| GAAGGAGGAGGTGGAGAAGG+AGG | 0.433472 | 7:-5495768 | None:intergenic |
| GCCAAAACCTTCCCCAAGTT+CGG | 0.444099 | 7:+5496110 | MsG0780036260.01.T01:CDS |
| CAGAGAAGGTATGGAGGATA+CGG | 0.447633 | 7:+5496557 | MsG0780036260.01.T01:CDS |
| TCTGAATTCCCATGTGCTCC+CGG | 0.451292 | 7:+5496290 | MsG0780036260.01.T01:CDS |
| TCCTCCACAGGAGGAGGAGG+GGG | 0.456429 | 7:-5495984 | None:intergenic |
| TACTCCTCCACAGGAGGAGG+AGG | 0.457097 | 7:-5495987 | None:intergenic |
| CACTCTTGAAGGATATAATT+GGG | 0.461047 | 7:-5496427 | None:intergenic |
| GACATACTACTTGTTGCATA+TGG | 0.464190 | 7:+5496692 | MsG0780036260.01.T01:CDS |
| GGAGGTGGAGGAGAAGGAGG+AGG | 0.467733 | 7:-5495816 | None:intergenic |
| ATGTTTCCAGTTATCTGGAA+TGG | 0.476826 | 7:-5496335 | None:intergenic |
| GCCGGCCTGCCATGAAGTTA+TGG | 0.478726 | 7:+5496499 | MsG0780036260.01.T01:CDS |
| ATAACTGGAAACATAGATTA+CGG | 0.482252 | 7:+5496344 | MsG0780036260.01.T01:CDS |
| CAGTAGTCCCTGGTCGGATA+CGG | 0.482503 | 7:-5496257 | None:intergenic |
| GTGCTTGGCGGGTCGAGATA+GGG | 0.484081 | 7:+5495623 | MsG0780036260.01.T01:CDS |
| CCAATCCGATCCATCTCGCT+TGG | 0.487282 | 7:-5496650 | None:intergenic |
| CTAATTATAATAGGATCTAC+AGG | 0.488991 | 7:+5495597 | MsG0780036260.01.T01:CDS |
| ATCTACAGGATGGTGCTTGG+CGG | 0.490040 | 7:+5495611 | MsG0780036260.01.T01:CDS |
| TATTGCTTCCCGGGAGCACA+TGG | 0.495422 | 7:-5496299 | None:intergenic |
| GCCTGCCATGAAGTTATGGC+TGG | 0.503377 | 7:+5496503 | MsG0780036260.01.T01:CDS |
| GATCAACTTCAGAGAAGGTA+TGG | 0.504828 | 7:+5496548 | MsG0780036260.01.T01:CDS |
| CAACTGAAGGACCTTACGAT+TGG | 0.508041 | 7:+5496213 | MsG0780036260.01.T01:CDS |
| CCTACCGTAGTATTGCTTCC+CGG | 0.511349 | 7:-5496309 | None:intergenic |
| GGAGTACCTCATCTCGGTAA+AGG | 0.513508 | 7:+5496004 | MsG0780036260.01.T01:CDS |
| GGAAACTATGTTGAATGCTA+TGG | 0.514331 | 7:+5496713 | MsG0780036260.01.T01:CDS |
| AGTAGTACTATTACTACTGT+CGG | 0.516707 | 7:-5495576 | None:intergenic |
| TCTACAGGATGGTGCTTGGC+GGG | 0.521803 | 7:+5495612 | MsG0780036260.01.T01:CDS |
| CTCCTCCACAGGAGGAGGAG+GGG | 0.527159 | 7:-5495985 | None:intergenic |
| TCCAGCCATAACTTCATGGC+AGG | 0.528982 | 7:-5496504 | None:intergenic |
| GCCATAACTTCATGGCAGGC+CGG | 0.536400 | 7:-5496500 | None:intergenic |
| GTACCTACATTACCGAACTT+GGG | 0.537559 | 7:-5496122 | None:intergenic |
| AGGATCTACAGGATGGTGCT+TGG | 0.538586 | 7:+5495608 | MsG0780036260.01.T01:CDS |
| CTGAATTCCCATGTGCTCCC+GGG | 0.540245 | 7:+5496291 | MsG0780036260.01.T01:CDS |
| TGAAGGAACCGTATCCGACC+AGG | 0.540571 | 7:+5496249 | MsG0780036260.01.T01:CDS |
| GTGGATTATGCTGCAGTGCA+TGG | 0.544281 | 7:+5495652 | MsG0780036260.01.T01:CDS |
| GCTTGGTTCGCAGTAGTCCC+TGG | 0.544396 | 7:-5496267 | None:intergenic |
| TATACGTCGGATGTCTGAAT+CGG | 0.546764 | 7:-5496473 | None:intergenic |
| CTACCGTAGTATTGCTTCCC+GGG | 0.547334 | 7:-5496308 | None:intergenic |
| AGGTACTCCTCCACAGGAGG+AGG | 0.550430 | 7:-5495990 | None:intergenic |
| CCAAGCGAGATGGATCGGAT+TGG | 0.551091 | 7:+5496650 | MsG0780036260.01.T01:CDS |
| GTAGTACTATTACTACTGTC+GGG | 0.560539 | 7:-5495575 | None:intergenic |
| TTGGGGATATTGCTTTGTGA+AGG | 0.560715 | 7:+5496232 | MsG0780036260.01.T01:CDS |
| GCACATGGGAATTCAGAGCT+TGG | 0.561314 | 7:-5496284 | None:intergenic |
| CCGGGAAGCAATACTACGGT+AGG | 0.561794 | 7:+5496309 | MsG0780036260.01.T01:CDS |
| TGACTCCAAGCGAGATGGAT+CGG | 0.563979 | 7:+5496645 | MsG0780036260.01.T01:CDS |
| ACTCCTCCACAGGAGGAGGA+GGG | 0.568941 | 7:-5495986 | None:intergenic |
| TACATTACCGAACTTGGGGA+AGG | 0.581411 | 7:-5496117 | None:intergenic |
| AGAGAAGGTATGGAGGATAC+GGG | 0.583219 | 7:+5496558 | MsG0780036260.01.T01:CDS |
| GACATCCGACGTATATATGC+CGG | 0.585214 | 7:+5496481 | MsG0780036260.01.T01:CDS |
| AAGCAATATCCCCAATCGTA+AGG | 0.585697 | 7:-5496224 | None:intergenic |
| CGGGAAGCAATACTACGGTA+GGG | 0.588518 | 7:+5496310 | MsG0780036260.01.T01:CDS |
| GAAGGATATAATTGGGTCAG+TGG | 0.591004 | 7:-5496420 | None:intergenic |
| GTTCATGACTCCAAGCGAGA+TGG | 0.591557 | 7:+5496640 | MsG0780036260.01.T01:CDS |
| TGGATTATGCTGCAGTGCAT+GGG | 0.592592 | 7:+5495653 | MsG0780036260.01.T01:CDS |
| CTTGGCGGGTCGAGATAGGG+AGG | 0.596615 | 7:+5495626 | MsG0780036260.01.T01:CDS |
| ACTGAAGGACCTTACGATTG+GGG | 0.597185 | 7:+5496215 | MsG0780036260.01.T01:CDS |
| AACATAGATTACGGAAGATG+TGG | 0.601170 | 7:+5496353 | MsG0780036260.01.T01:CDS |
| TTCCCCAAGTTCGGTAATGT+AGG | 0.601264 | 7:+5496119 | MsG0780036260.01.T01:CDS |
| ATACGGGATGACAACTTATG+TGG | 0.605274 | 7:+5496574 | MsG0780036260.01.T01:CDS |
| AAAACTGGAAATGTGGAGGT+GGG | 0.608412 | 7:+5496618 | MsG0780036260.01.T01:CDS |
| TGAAATCCTTTACCGAGATG+AGG | 0.610470 | 7:-5496010 | None:intergenic |
| ATGCTGATCAACTTCAGAGA+AGG | 0.611620 | 7:+5496543 | MsG0780036260.01.T01:CDS |
| GGTTCGCAGTAGTCCCTGGT+CGG | 0.614886 | 7:-5496263 | None:intergenic |
| TACCTACATTACCGAACTTG+GGG | 0.615827 | 7:-5496121 | None:intergenic |
| CACGATGATGATCTGTGTGA+GGG | 0.618288 | 7:+5496050 | MsG0780036260.01.T01:CDS |
| TGAAGTTGATCAGCATGAGA+AGG | 0.618426 | 7:-5496536 | None:intergenic |
| GAGATGAGGTACTCCTCCAC+AGG | 0.622328 | 7:-5495996 | None:intergenic |
| ACGTCGGATGTCTGAATCGG+AGG | 0.626982 | 7:-5496470 | None:intergenic |
| GGTCGAGATAGGGAGGAATG+TGG | 0.628829 | 7:+5495633 | MsG0780036260.01.T01:CDS |
| TGTGGAGGAGTACCTCATCT+CGG | 0.630847 | 7:+5495998 | MsG0780036260.01.T01:CDS |
| ACAAGTGGTGGATCAACTGA+AGG | 0.633335 | 7:+5496200 | MsG0780036260.01.T01:CDS |
| GATGATCTGTGTGAGGGGAA+AGG | 0.633834 | 7:+5496056 | MsG0780036260.01.T01:CDS |
| CAAAGTTCTCACGAAACAAG+TGG | 0.637024 | 7:+5496185 | MsG0780036260.01.T01:CDS |
| TAATTGGGTCAGTGGCAACA+AGG | 0.640917 | 7:-5496412 | None:intergenic |
| GGGAAGCAATACTACGGTAG+GGG | 0.642706 | 7:+5496311 | MsG0780036260.01.T01:CDS |
| ATGAGGTACTCCTCCACAGG+AGG | 0.644606 | 7:-5495993 | None:intergenic |
| AGATCAATTGAAAGCCATTG+CGG | 0.647787 | 7:+5495684 | MsG0780036260.01.T01:CDS |
| TTATAATAGGATCTACAGGA+TGG | 0.658343 | 7:+5495601 | MsG0780036260.01.T01:CDS |
| CAACTTCAGAGAAGGTATGG+AGG | 0.659279 | 7:+5496551 | MsG0780036260.01.T01:CDS |
| ATTGCTTCCCGGGAGCACAT+GGG | 0.672296 | 7:-5496298 | None:intergenic |
| AGTTCTCACGAAACAAGTGG+TGG | 0.683018 | 7:+5496188 | MsG0780036260.01.T01:CDS |
| GCTCCCGGGAAGCAATACTA+CGG | 0.687521 | 7:+5496305 | MsG0780036260.01.T01:CDS |
| GAAGGAACCGTATCCGACCA+GGG | 0.689660 | 7:+5496250 | MsG0780036260.01.T01:CDS |
| TCACGATGATGATCTGTGTG+AGG | 0.695121 | 7:+5496049 | MsG0780036260.01.T01:CDS |
| ACGATGATGATCTGTGTGAG+GGG | 0.740758 | 7:+5496051 | MsG0780036260.01.T01:CDS |
| GCAGGCCGGCATATATACGT+CGG | 0.755872 | 7:-5496486 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAGTACTACTAATTATAAT+AGG | + | Chr7:5495588-5495607 | MsG0780036260.01.T01:CDS | 15.0% |
| !! | TACTACAAATTCAAAGAAAT+CGG | + | Chr7:5496142-5496161 | MsG0780036260.01.T01:CDS | 20.0% |
| !!! | ATTTCCAGTTTTTGAATTTT+TGG | - | Chr7:5496610-5496629 | None:intergenic | 20.0% |
| !!! | TTTCCAGTTTTTGAATTTTT+GGG | - | Chr7:5496609-5496628 | None:intergenic | 20.0% |
| ! | AAATTCAAAAACTGGAAATG+TGG | + | Chr7:5496611-5496630 | MsG0780036260.01.T01:CDS | 25.0% |
| ! | ATAACTGGAAACATAGATTA+CGG | + | Chr7:5496344-5496363 | MsG0780036260.01.T01:CDS | 25.0% |
| ! | CTAATTATAATAGGATCTAC+AGG | + | Chr7:5495597-5495616 | MsG0780036260.01.T01:CDS | 25.0% |
| AATCTATGTTTCCAGTTATC+TGG | - | Chr7:5496343-5496362 | None:intergenic | 30.0% | |
| AGTAGTACTATTACTACTGT+CGG | - | Chr7:5495579-5495598 | None:intergenic | 30.0% | |
| CACTCTTGAAGGATATAATT+GGG | - | Chr7:5496430-5496449 | None:intergenic | 30.0% | |
| TTATAATAGGATCTACAGGA+TGG | + | Chr7:5495601-5495620 | MsG0780036260.01.T01:CDS | 30.0% | |
| AACATAGATTACGGAAGATG+TGG | + | Chr7:5496353-5496372 | MsG0780036260.01.T01:CDS | 35.0% | |
| AGATCAATTGAAAGCCATTG+CGG | + | Chr7:5495684-5495703 | MsG0780036260.01.T01:CDS | 35.0% | |
| ATATTCCAGCCATAACTTCA+TGG | - | Chr7:5496511-5496530 | None:intergenic | 35.0% | |
| ATGAAGTTATGGCTGGAATA+TGG | + | Chr7:5496510-5496529 | MsG0780036260.01.T01:CDS | 35.0% | |
| ATGTTTCCAGTTATCTGGAA+TGG | - | Chr7:5496338-5496357 | None:intergenic | 35.0% | |
| CCTCCCAAAAATTCAAAAAC+TGG | + | Chr7:5496603-5496622 | MsG0780036260.01.T01:CDS | 35.0% | |
| GCACTCTTGAAGGATATAAT+TGG | - | Chr7:5496431-5496450 | None:intergenic | 35.0% | |
| GGAAACTATGTTGAATGCTA+TGG | + | Chr7:5496713-5496732 | MsG0780036260.01.T01:CDS | 35.0% | |
| GTAGTACTATTACTACTGTC+GGG | - | Chr7:5495578-5495597 | None:intergenic | 35.0% | |
| TTCAAAAACTGGAAATGTGG+AGG | + | Chr7:5496614-5496633 | MsG0780036260.01.T01:CDS | 35.0% | |
| ! | AAACCATAAAGCACTCTTGA+AGG | - | Chr7:5496441-5496460 | None:intergenic | 35.0% |
| ! | GACATACTACTTGTTGCATA+TGG | + | Chr7:5496692-5496711 | MsG0780036260.01.T01:CDS | 35.0% |
| !! | CCAGTTTTTGAATTTTTGGG+AGG | - | Chr7:5496606-5496625 | None:intergenic | 35.0% |
| !! | TATCCTTCAAGAGTGCTTTA+TGG | + | Chr7:5496435-5496454 | MsG0780036260.01.T01:CDS | 35.0% |
| !!! | TCAAGAGTGCTTTATGGTTT+TGG | + | Chr7:5496441-5496460 | MsG0780036260.01.T01:CDS | 35.0% |
| AAAAACTGGAAATGTGGAGG+TGG | + | Chr7:5496617-5496636 | MsG0780036260.01.T01:CDS | 40.0% | |
| AAAACTGGAAATGTGGAGGT+GGG | + | Chr7:5496618-5496637 | MsG0780036260.01.T01:CDS | 40.0% | |
| AACTGAAGGACCTTACGATT+GGG | + | Chr7:5496214-5496233 | MsG0780036260.01.T01:CDS | 40.0% | |
| AAGCAATATCCCCAATCGTA+AGG | - | Chr7:5496227-5496246 | None:intergenic | 40.0% | |
| AGTACCTACATTACCGAACT+TGG | - | Chr7:5496126-5496145 | None:intergenic | 40.0% | |
| ATACGGGATGACAACTTATG+TGG | + | Chr7:5496574-5496593 | MsG0780036260.01.T01:CDS | 40.0% | |
| ATGCTGATCAACTTCAGAGA+AGG | + | Chr7:5496543-5496562 | MsG0780036260.01.T01:CDS | 40.0% | |
| CAAAGTTCTCACGAAACAAG+TGG | + | Chr7:5496185-5496204 | MsG0780036260.01.T01:CDS | 40.0% | |
| GAAGGATATAATTGGGTCAG+TGG | - | Chr7:5496423-5496442 | None:intergenic | 40.0% | |
| GATCAACTTCAGAGAAGGTA+TGG | + | Chr7:5496548-5496567 | MsG0780036260.01.T01:CDS | 40.0% | |
| GTACCTACATTACCGAACTT+GGG | - | Chr7:5496125-5496144 | None:intergenic | 40.0% | |
| TACCTACATTACCGAACTTG+GGG | - | Chr7:5496124-5496143 | None:intergenic | 40.0% | |
| TATACGTCGGATGTCTGAAT+CGG | - | Chr7:5496476-5496495 | None:intergenic | 40.0% | |
| TGAAATCCTTTACCGAGATG+AGG | - | Chr7:5496013-5496032 | None:intergenic | 40.0% | |
| TTGGGGATATTGCTTTGTGA+AGG | + | Chr7:5496232-5496251 | MsG0780036260.01.T01:CDS | 40.0% | |
| ! | TGAAGTTGATCAGCATGAGA+AGG | - | Chr7:5496539-5496558 | None:intergenic | 40.0% |
| ACGATGATGATCTGTGTGAG+GGG | + | Chr7:5496051-5496070 | MsG0780036260.01.T01:CDS | 45.0% | |
| ACTGAAGGACCTTACGATTG+GGG | + | Chr7:5496215-5496234 | MsG0780036260.01.T01:CDS | 45.0% | |
| AGTTCTCACGAAACAAGTGG+TGG | + | Chr7:5496188-5496207 | MsG0780036260.01.T01:CDS | 45.0% | |
| CAACTGAAGGACCTTACGAT+TGG | + | Chr7:5496213-5496232 | MsG0780036260.01.T01:CDS | 45.0% | |
| CACGATGATGATCTGTGTGA+GGG | + | Chr7:5496050-5496069 | MsG0780036260.01.T01:CDS | 45.0% | |
| GACATCCGACGTATATATGC+CGG | + | Chr7:5496481-5496500 | MsG0780036260.01.T01:CDS | 45.0% | |
| TAATTGGGTCAGTGGCAACA+AGG | - | Chr7:5496415-5496434 | None:intergenic | 45.0% | |
| TACATTACCGAACTTGGGGA+AGG | - | Chr7:5496120-5496139 | None:intergenic | 45.0% | |
| TCACGATGATGATCTGTGTG+AGG | + | Chr7:5496049-5496068 | MsG0780036260.01.T01:CDS | 45.0% | |
| TGGATTATGCTGCAGTGCAT+GGG | + | Chr7:5495653-5495672 | MsG0780036260.01.T01:CDS | 45.0% | |
| TTCCCCAAGTTCGGTAATGT+AGG | + | Chr7:5496119-5496138 | MsG0780036260.01.T01:CDS | 45.0% | |
| ! | AGAGAAGGTATGGAGGATAC+GGG | + | Chr7:5496558-5496577 | MsG0780036260.01.T01:CDS | 45.0% |
| ! | CAACTTCAGAGAAGGTATGG+AGG | + | Chr7:5496551-5496570 | MsG0780036260.01.T01:CDS | 45.0% |
| ! | CAGAGAAGGTATGGAGGATA+CGG | + | Chr7:5496557-5496576 | MsG0780036260.01.T01:CDS | 45.0% |
| !! | ACAAGTGGTGGATCAACTGA+AGG | + | Chr7:5496200-5496219 | MsG0780036260.01.T01:CDS | 45.0% |
| AGGATCTACAGGATGGTGCT+TGG | + | Chr7:5495608-5495627 | MsG0780036260.01.T01:CDS | 50.0% | |
| AGGGGTCCATTCCAGATAAC+TGG | + | Chr7:5496329-5496348 | MsG0780036260.01.T01:CDS | 50.0% | |
| ATCTACAGGATGGTGCTTGG+CGG | + | Chr7:5495611-5495630 | MsG0780036260.01.T01:CDS | 50.0% | |
| CCTACCGTAGTATTGCTTCC+CGG | - | Chr7:5496312-5496331 | None:intergenic | 50.0% | |
| CGGGAAGCAATACTACGGTA+GGG | + | Chr7:5496310-5496329 | MsG0780036260.01.T01:CDS | 50.0% | |
| CTACCGTAGTATTGCTTCCC+GGG | - | Chr7:5496311-5496330 | None:intergenic | 50.0% | |
| GATGATCTGTGTGAGGGGAA+AGG | + | Chr7:5496056-5496075 | MsG0780036260.01.T01:CDS | 50.0% | |
| GCACATGGGAATTCAGAGCT+TGG | - | Chr7:5496287-5496306 | None:intergenic | 50.0% | |
| GCCAAAACCTTCCCCAAGTT+CGG | + | Chr7:5496110-5496129 | MsG0780036260.01.T01:CDS | 50.0% | |
| GGAAGATGTGGACGTGCAAT+AGG | + | Chr7:5496365-5496384 | MsG0780036260.01.T01:CDS | 50.0% | |
| GGGAAGCAATACTACGGTAG+GGG | + | Chr7:5496311-5496330 | MsG0780036260.01.T01:CDS | 50.0% | |
| GTTCATGACTCCAAGCGAGA+TGG | + | Chr7:5496640-5496659 | MsG0780036260.01.T01:CDS | 50.0% | |
| TCCAGCCATAACTTCATGGC+AGG | - | Chr7:5496507-5496526 | None:intergenic | 50.0% | |
| TCTGAATTCCCATGTGCTCC+CGG | + | Chr7:5496290-5496309 | MsG0780036260.01.T01:CDS | 50.0% | |
| TGACTCCAAGCGAGATGGAT+CGG | + | Chr7:5496645-5496664 | MsG0780036260.01.T01:CDS | 50.0% | |
| ! | ACCGAACTTGGGGAAGGTTT+TGG | - | Chr7:5496114-5496133 | None:intergenic | 50.0% |
| ! | GGAGTACCTCATCTCGGTAA+AGG | + | Chr7:5496004-5496023 | MsG0780036260.01.T01:CDS | 50.0% |
| ! | GTGGATTATGCTGCAGTGCA+TGG | + | Chr7:5495652-5495671 | MsG0780036260.01.T01:CDS | 50.0% |
| !! | TGTGGAGGAGTACCTCATCT+CGG | + | Chr7:5495998-5496017 | MsG0780036260.01.T01:CDS | 50.0% |
| ACGTCGGATGTCTGAATCGG+AGG | - | Chr7:5496473-5496492 | None:intergenic | 55.0% | |
| AGAAGGAGGAGGTGGAGAAG+GGG | - | Chr7:5495772-5495791 | None:intergenic | 55.0% | |
| AGAAGGAGGTGGAGGAGAAG+GGG | - | Chr7:5495757-5495776 | None:intergenic | 55.0% | |
| CAGTAGTCCCTGGTCGGATA+CGG | - | Chr7:5496260-5496279 | None:intergenic | 55.0% | |
| CCAAGCGAGATGGATCGGAT+TGG | + | Chr7:5496650-5496669 | MsG0780036260.01.T01:CDS | 55.0% | |
| CCAATCCGATCCATCTCGCT+TGG | - | Chr7:5496653-5496672 | None:intergenic | 55.0% | |
| CCGGGAAGCAATACTACGGT+AGG | + | Chr7:5496309-5496328 | MsG0780036260.01.T01:CDS | 55.0% | |
| CTGAATTCCCATGTGCTCCC+GGG | + | Chr7:5496291-5496310 | MsG0780036260.01.T01:CDS | 55.0% | |
| GAAGGAACCGTATCCGACCA+GGG | + | Chr7:5496250-5496269 | MsG0780036260.01.T01:CDS | 55.0% | |
| GAGAAGGAGGAGGTGGAGAA+GGG | - | Chr7:5495773-5495792 | None:intergenic | 55.0% | |
| GAGAAGGAGGTGGAGGAGAA+GGG | - | Chr7:5495758-5495777 | None:intergenic | 55.0% | |
| GCAGGCCGGCATATATACGT+CGG | - | Chr7:5496489-5496508 | None:intergenic | 55.0% | |
| GCCATAACTTCATGGCAGGC+CGG | - | Chr7:5496503-5496522 | None:intergenic | 55.0% | |
| GCCTGCCATGAAGTTATGGC+TGG | + | Chr7:5496503-5496522 | MsG0780036260.01.T01:CDS | 55.0% | |
| GCTCCCGGGAAGCAATACTA+CGG | + | Chr7:5496305-5496324 | MsG0780036260.01.T01:CDS | 55.0% | |
| GGTCGAGATAGGGAGGAATG+TGG | + | Chr7:5495633-5495652 | MsG0780036260.01.T01:CDS | 55.0% | |
| TCTACAGGATGGTGCTTGGC+GGG | + | Chr7:5495612-5495631 | MsG0780036260.01.T01:CDS | 55.0% | |
| TGAAGGAACCGTATCCGACC+AGG | + | Chr7:5496249-5496268 | MsG0780036260.01.T01:CDS | 55.0% | |
| ! | ATGAGGTACTCCTCCACAGG+AGG | - | Chr7:5495996-5496015 | None:intergenic | 55.0% |
| ! | ATTGCTTCCCGGGAGCACAT+GGG | - | Chr7:5496301-5496320 | None:intergenic | 55.0% |
| ! | GAGATGAGGTACTCCTCCAC+AGG | - | Chr7:5495999-5496018 | None:intergenic | 55.0% |
| ! | TATTGCTTCCCGGGAGCACA+TGG | - | Chr7:5496302-5496321 | None:intergenic | 55.0% |
| ACTCCTCCACAGGAGGAGGA+GGG | - | Chr7:5495989-5496008 | None:intergenic | 60.0% | |
| AGGTACTCCTCCACAGGAGG+AGG | - | Chr7:5495993-5496012 | None:intergenic | 60.0% | |
| GAAGGAGGAGGTGGAGAAGG+AGG | - | Chr7:5495771-5495790 | None:intergenic | 60.0% | |
| GAAGGAGGAGGTGGAGAAGG+GGG | - | Chr7:5495771-5495790 | None:intergenic | 60.0% | |
| GAAGGAGGTGGAGGAGAAGG+AGG | - | Chr7:5495756-5495775 | None:intergenic | 60.0% | |
| GAAGGAGGTGGAGGAGAAGG+GGG | - | Chr7:5495756-5495775 | None:intergenic | 60.0% | |
| GCCGGCCTGCCATGAAGTTA+TGG | + | Chr7:5496499-5496518 | MsG0780036260.01.T01:CDS | 60.0% | |
| GGAGAAGGAGAAGGAGGAGG+GGG | - | Chr7:5495780-5495799 | None:intergenic | 60.0% | |
| GGAGAAGGAGAAGGAGGAGG+TGG | - | Chr7:5495780-5495799 | None:intergenic | 60.0% | |
| GGAGAAGGAGGAGGTGGAGA+AGG | - | Chr7:5495774-5495793 | None:intergenic | 60.0% | |
| GGAGAAGGAGGTGGAGGAGA+AGG | - | Chr7:5495759-5495778 | None:intergenic | 60.0% | |
| GGAGGAGAAGGAGAAGGAGG+AGG | - | Chr7:5495783-5495802 | None:intergenic | 60.0% | |
| GGAGGAGGAGAAGGAGAAGG+AGG | - | Chr7:5495786-5495805 | None:intergenic | 60.0% | |
| GGGAGAAGGAGAAGGAGGAG+GGG | - | Chr7:5495877-5495896 | None:intergenic | 60.0% | |
| GGGGAGAAGGAGAAGGAGGA+GGG | - | Chr7:5495878-5495897 | None:intergenic | 60.0% | |
| GGGTCAGTGGCAACAAGGTC+TGG | - | Chr7:5496410-5496429 | None:intergenic | 60.0% | |
| GGTTCGCAGTAGTCCCTGGT+CGG | - | Chr7:5496266-5496285 | None:intergenic | 60.0% | |
| GTGGAGAAGGAGGTGGAGGA+GGG | - | Chr7:5495761-5495780 | None:intergenic | 60.0% | |
| TACTCCTCCACAGGAGGAGG+AGG | - | Chr7:5495990-5496009 | None:intergenic | 60.0% | |
| TGGAGAAGGAGGTGGAGGAG+GGG | - | Chr7:5495760-5495779 | None:intergenic | 60.0% | |
| ! | GCTTGGTTCGCAGTAGTCCC+TGG | - | Chr7:5496270-5496289 | None:intergenic | 60.0% |
| ! | GTGCTTGGCGGGTCGAGATA+GGG | + | Chr7:5495623-5495642 | MsG0780036260.01.T01:CDS | 60.0% |
| AGGAGGAGGAGGAGGAGGAG+GGG | - | Chr7:5495715-5495734 | None:intergenic | 65.0% | |
| AGGAGGAGGGGGAGGAGAAG+GGG | - | Chr7:5495976-5495995 | None:intergenic | 65.0% | |
| AGGTGGAGGAGAAGGGGGAG+GGG | - | Chr7:5495751-5495770 | None:intergenic | 65.0% | |
| CTCCTCCACAGGAGGAGGAG+GGG | - | Chr7:5495988-5496007 | None:intergenic | 65.0% | |
| GAAGGAGGAGGAGGAGGAGG+AGG | - | Chr7:5495726-5495745 | None:intergenic | 65.0% | |
| GAAGGAGGAGGGGGAGAAGG+AGG | - | Chr7:5495867-5495886 | None:intergenic | 65.0% | |
| GAAGGGGGAGGTGGAGAAGG+AGG | - | Chr7:5495837-5495856 | None:intergenic | 65.0% | |
| GAGGAGGAGGAGGAGGAGGA+GGG | - | Chr7:5495716-5495735 | None:intergenic | 65.0% | |
| GAGGAGGAGGGGGAGGAGAA+GGG | - | Chr7:5495977-5495996 | None:intergenic | 65.0% | |
| GAGGTGGAGGAGAAGGGGGA+GGG | - | Chr7:5495752-5495771 | None:intergenic | 65.0% | |
| GGAGAAGGAGGAGGAGGAGG+AGG | - | Chr7:5495729-5495748 | None:intergenic | 65.0% | |
| GGAGAAGGAGGAGGGGGAGA+AGG | - | Chr7:5495870-5495889 | None:intergenic | 65.0% | |
| GGAGAAGGAGGTGGAGGAGG+GGG | - | Chr7:5495897-5495916 | None:intergenic | 65.0% | |
| GGAGAAGGGGGAGGAGGAGA+AGG | - | Chr7:5495795-5495814 | None:intergenic | 65.0% | |
| GGAGAAGGGGGAGGTGGAGA+AGG | - | Chr7:5495840-5495859 | None:intergenic | 65.0% | |
| GGAGGAGGGGGAGAAGGAGA+AGG | - | Chr7:5495885-5495904 | None:intergenic | 65.0% | |
| GGAGGAGGTGGAGAAGGAGG+TGG | - | Chr7:5495768-5495787 | None:intergenic | 65.0% | |
| GGAGGGGGAGAAGGAGAAGG+AGG | - | Chr7:5495882-5495901 | None:intergenic | 65.0% | |
| GGAGGTGGAGAAGGAGGTGG+AGG | - | Chr7:5495765-5495784 | None:intergenic | 65.0% | |
| GGAGGTGGAGGAGAAGGAGG+AGG | - | Chr7:5495819-5495838 | None:intergenic | 65.0% | |
| GGGGGAGAAGGAGAAGGAGG+AGG | - | Chr7:5495879-5495898 | None:intergenic | 65.0% | |
| GGGGGAGGAGGAGAAGGAGA+AGG | - | Chr7:5495789-5495808 | None:intergenic | 65.0% | |
| GGTGGAGAAGGAGGTGGAGG+AGG | - | Chr7:5495762-5495781 | None:intergenic | 65.0% | |
| GGTGGAGGAGAAGGAGGAGG+TGG | - | Chr7:5495816-5495835 | None:intergenic | 65.0% | |
| TCCTCCACAGGAGGAGGAGG+GGG | - | Chr7:5495987-5496006 | None:intergenic | 65.0% | |
| ! | CTTGGCGGGTCGAGATAGGG+AGG | + | Chr7:5495626-5495645 | MsG0780036260.01.T01:CDS | 65.0% |
| ! | GGTGCTTGGCGGGTCGAGAT+AGG | + | Chr7:5495622-5495641 | MsG0780036260.01.T01:CDS | 65.0% |
| AGGGGGAGGAGAAGGGGGAG+GGG | - | Chr7:5495970-5495989 | None:intergenic | 70.0% | |
| GAAGGGGGAGGGGGAGAAGG+AGG | - | Chr7:5495741-5495760 | None:intergenic | 70.0% | |
| GAGGAGGAGGAGGAGGGGGA+GGG | - | Chr7:5495710-5495729 | None:intergenic | 70.0% | |
| GAGGGGGAGGAGAAGGGGGA+GGG | - | Chr7:5495971-5495990 | None:intergenic | 70.0% | |
| GGAGAAGGGGGAGGGGGAGA+AGG | - | Chr7:5495744-5495763 | None:intergenic | 70.0% | |
| GGAGGAGGAGGAGGAGGAGG+AGG | - | Chr7:5495714-5495733 | None:intergenic | 70.0% | |
| GGAGGAGGAGGAGGAGGAGG+GGG | - | Chr7:5495714-5495733 | None:intergenic | 70.0% | |
| GGAGGAGGAGGGGGAGGAGA+AGG | - | Chr7:5495978-5495997 | None:intergenic | 70.0% | |
| GGAGGAGGGGGAGAAGGAGG+TGG | - | Chr7:5495864-5495883 | None:intergenic | 70.0% | |
| GGAGGAGGGGGAGGAGAAGG+GGG | - | Chr7:5495975-5495994 | None:intergenic | 70.0% | |
| GGAGGAGGTGGAGAAGGGGG+AGG | - | Chr7:5495804-5495823 | None:intergenic | 70.0% | |
| GGAGGGGGAGAAGGAGGAGG+AGG | - | Chr7:5495735-5495754 | None:intergenic | 70.0% | |
| GGAGGGGGAGAAGGAGGTGG+AGG | - | Chr7:5495861-5495880 | None:intergenic | 70.0% | |
| GGAGGTGGAGAAGGGGGAGG+AGG | - | Chr7:5495801-5495820 | None:intergenic | 70.0% | |
| GGAGGTGGAGGAGAAGGGGG+AGG | - | Chr7:5495753-5495772 | None:intergenic | 70.0% | |
| GGAGGTGGAGGAGGGGGAGA+AGG | - | Chr7:5495891-5495910 | None:intergenic | 70.0% | |
| GGGGGAGAAGGAGGAGGAGG+AGG | - | Chr7:5495732-5495751 | None:intergenic | 70.0% | |
| GGGGGAGGGGGAGAAGGAGA+AGG | - | Chr7:5495957-5495976 | None:intergenic | 70.0% | |
| GGGGGAGGTGGAGAAGGAGG+TGG | - | Chr7:5495834-5495853 | None:intergenic | 70.0% | |
| GGTGGAGGAGAAGGGGGAGG+GGG | - | Chr7:5495750-5495769 | None:intergenic | 70.0% | |
| GGTGGAGGAGAAGGGGGAGG+TGG | - | Chr7:5495750-5495769 | None:intergenic | 70.0% | |
| TCCACAGGAGGAGGAGGGGG+AGG | - | Chr7:5495984-5496003 | None:intergenic | 70.0% | |
| TCCCCCTCCTCCTCCTGTGG+AGG | + | Chr7:5495983-5496002 | MsG0780036260.01.T01:CDS | 70.0% | |
| TCCTCCCCCTCCTCCTCCTG+TGG | + | Chr7:5495980-5495999 | MsG0780036260.01.T01:CDS | 70.0% | |
| GAGGAGGGGGAGGGCCGCAA+TGG | - | Chr7:5495701-5495720 | None:intergenic | 75.0% | |
| GGAGGAGGAGGAGGAGGGGG+AGG | - | Chr7:5495711-5495730 | None:intergenic | 75.0% | |
| GGAGGGGGAGGAGAAGGGGG+AGG | - | Chr7:5495972-5495991 | None:intergenic | 75.0% | |
| GGGGGAGGAGAAGGGGGAGG+GGG | - | Chr7:5495969-5495988 | None:intergenic | 75.0% | |
| GGGGGAGGGGGAGAAGGAGG+AGG | - | Chr7:5495738-5495757 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 5495558 | 5496769 | 5495558 | ID=MsG0780036260.01;Name=MsG0780036260.01 |
| Chr7 | mRNA | 5495558 | 5496769 | 5495558 | ID=MsG0780036260.01.T01;Parent=MsG0780036260.01;Name=MsG0780036260.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|403 |
| Chr7 | exon | 5495558 | 5496769 | 5495558 | ID=MsG0780036260.01.T01:exon:2939;Parent=MsG0780036260.01.T01 |
| Chr7 | CDS | 5495558 | 5496769 | 5495558 | ID=MsG0780036260.01.T01:cds;Parent=MsG0780036260.01.T01 |
| Gene Sequence |
| Protein sequence |
