AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780038853.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780038853.01.T01 MTR_7g063440 89.031 392 11 2 5 396 123 482 0.0 694
MsG0780038853.01.T01 MTR_7g063440 89.031 392 11 2 5 396 31 390 0.0 693
MsG0780038853.01.T01 MTR_7g063440 91.589 321 11 1 5 325 123 427 0.0 584
MsG0780038853.01.T01 MTR_3g069030 55.696 395 128 7 6 395 111 463 4.29e-143 415
MsG0780038853.01.T01 MTR_3g096780 30.686 277 135 5 114 389 16 236 4.96e-33 129
MsG0780038853.01.T01 MTR_3g096780 30.201 298 148 7 98 394 107 345 5.19e-32 125
MsG0780038853.01.T01 MTR_3g096780 26.531 245 125 7 104 317 163 383 1.01e-13 72.8
MsG0780038853.01.T01 MTR_0095s0070 34.197 193 110 2 198 389 54 230 2.24e-31 120
MsG0780038853.01.T01 MTR_0095s0070 26.389 288 156 5 84 371 32 263 3.39e-22 95.5
MsG0780038853.01.T01 MTR_8g094410 28.114 281 142 5 104 381 27 250 3.99e-31 121
MsG0780038853.01.T01 MTR_8g094410 31.138 167 97 3 226 391 5 154 1.58e-17 83.2
MsG0780038853.01.T01 MTR_8g094410 36.207 116 58 1 274 389 1 100 2.71e-16 79.3
MsG0780038853.01.T01 MTR_8g094410 28.114 281 142 5 104 381 112 335 2.03e-30 120
MsG0780038853.01.T01 MTR_8g094410 32.979 188 106 3 206 389 14 185 3.67e-24 103
MsG0780038853.01.T01 MTR_8g094410 28.333 240 134 5 153 391 37 239 3.76e-19 89.0
MsG0780038853.01.T01 MTR_8g094410 34.197 193 110 2 198 389 58 234 2.66e-30 121
MsG0780038853.01.T01 MTR_8g094410 28.114 281 142 5 104 381 161 384 5.00e-30 120
MsG0780038853.01.T01 MTR_8g094410 26.861 309 169 7 84 391 36 288 9.17e-23 99.8
MsG0780038853.01.T01 MTR_8g094410 28.114 281 142 5 104 381 112 335 3.57e-30 119
MsG0780038853.01.T01 MTR_8g094410 32.979 188 106 3 206 389 14 185 6.74e-24 102
MsG0780038853.01.T01 MTR_8g094410 29.167 240 132 6 153 391 37 239 5.08e-19 88.2
MsG0780038853.01.T01 MTR_8g094410 34.197 193 110 2 198 389 58 234 4.31e-30 120
MsG0780038853.01.T01 MTR_8g094410 28.114 281 142 5 104 381 161 384 1.01e-29 119
MsG0780038853.01.T01 MTR_8g094410 26.861 309 169 7 84 391 36 288 1.73e-22 98.6
MsG0780038853.01.T01 MTR_8g094410 29.630 243 127 4 142 381 10 211 1.67e-29 115
MsG0780038853.01.T01 MTR_8g094410 33.333 186 106 3 210 394 2 170 6.44e-26 105
MsG0780038853.01.T01 MTR_8g094410 40.000 80 32 1 313 392 1 64 2.17e-11 64.3
MsG0780038853.01.T01 MTR_5g089900 35.484 186 100 4 207 388 327 496 8.12e-25 107
MsG0780038853.01.T01 MTR_5g089900 27.575 301 162 9 97 392 312 561 9.43e-20 92.0
MsG0780038853.01.T01 MTR_5g089900 29.492 295 143 11 109 384 411 659 7.09e-17 83.2
MsG0780038853.01.T01 MTR_5g089900 24.167 240 149 6 96 333 467 675 3.65e-12 68.6
MsG0780038853.01.T01 MTR_5g038220 29.344 259 132 6 138 391 55 267 4.52e-22 97.1
MsG0780038853.01.T01 MTR_5g038220 28.676 272 118 10 115 373 153 361 2.38e-16 80.5
MsG0780038853.01.T01 MTR_1g099220 34.555 191 105 4 207 393 281 455 1.09e-21 97.8
MsG0780038853.01.T01 MTR_1g099220 28.077 260 151 8 135 389 284 512 9.47e-17 82.8
MsG0780038853.01.T01 MTR_1g099220 25.862 290 160 8 109 384 365 613 3.24e-15 78.2
MsG0780038853.01.T01 MTR_1g099220 26.710 307 158 9 109 394 311 571 5.25e-15 77.4
MsG0780038853.01.T01 MTR_1g099220 23.830 235 150 4 96 330 421 626 2.18e-11 66.2
MsG0780038853.01.T01 MTR_6g034795 35.484 186 100 4 207 388 278 447 2.06e-20 94.0
MsG0780038853.01.T01 MTR_6g034795 29.902 204 113 4 204 394 382 568 6.26e-16 80.5
MsG0780038853.01.T01 MTR_6g034795 27.273 253 128 7 133 371 386 596 7.52e-14 73.9
MsG0780038853.01.T01 MTR_6g034795 30.719 153 86 3 243 391 262 398 1.11e-11 67.0
MsG0780038853.01.T01 MTR_6g034795 23.305 236 150 5 96 330 418 623 3.91e-11 65.5
MsG0780038853.01.T01 MTR_3g064560 26.879 346 170 12 98 396 341 650 4.15e-19 90.1
MsG0780038853.01.T01 MTR_3g064560 32.620 187 104 4 207 388 306 475 2.43e-15 78.6
MsG0780038853.01.T01 MTR_7g072410 34.031 191 106 4 207 393 266 440 6.95e-19 89.4
MsG0780038853.01.T01 MTR_7g072410 28.720 289 152 8 109 384 350 597 2.44e-17 84.7
MsG0780038853.01.T01 MTR_3g097060 25.301 332 161 8 104 388 59 350 1.49e-18 87.4
MsG0780038853.01.T01 MTR_3g097060 26.384 307 146 8 104 388 165 413 3.46e-15 77.0
MsG0780038853.01.T01 MTR_3g097060 34.320 169 90 5 229 393 40 191 1.13e-13 72.4
MsG0780038853.01.T01 MTR_0024s0070 27.402 281 140 8 153 393 8 264 1.69e-18 87.0
MsG0780038853.01.T01 MTR_0024s0070 26.619 278 140 6 134 393 154 385 1.43e-16 81.3
MsG0780038853.01.T01 MTR_3g097060 25.301 332 161 8 104 388 59 350 1.72e-18 86.7
MsG0780038853.01.T01 MTR_3g097060 34.320 169 90 5 229 393 40 191 1.17e-13 72.4
MsG0780038853.01.T01 MTR_3g097060 25.292 257 125 6 104 351 165 363 7.57e-11 63.5
MsG0780038853.01.T01 MTR_3g086300 26.996 263 143 8 140 393 209 431 3.13e-18 87.0
MsG0780038853.01.T01 MTR_3g086300 28.342 187 114 4 213 395 154 324 2.43e-14 75.1
MsG0780038853.01.T01 MTR_1g042800 33.508 191 107 4 207 393 261 435 4.83e-18 87.0
MsG0780038853.01.T01 MTR_1g042800 27.055 292 156 9 109 384 345 595 2.80e-15 78.2
MsG0780038853.01.T01 MTR_1g042800 29.665 209 113 7 202 394 363 553 1.28e-14 76.3
MsG0780038853.01.T01 MTR_1g042800 31.579 152 84 3 244 391 246 381 2.59e-13 72.4
MsG0780038853.01.T01 MTR_7g086050 27.273 253 133 8 149 391 154 365 1.51e-16 82.4
MsG0780038853.01.T01 MTR_7g086050 30.939 181 113 4 213 393 145 313 4.73e-12 68.2
MsG0780038853.01.T01 MTR_7g086050 25.882 255 127 9 101 349 232 430 4.87e-11 65.1
MsG0780038853.01.T01 MTR_4g029410 29.381 194 110 3 202 384 222 399 3.45e-16 81.3
MsG0780038853.01.T01 MTR_4g029410 26.271 236 142 5 96 330 208 412 2.57e-14 75.5
MsG0780038853.01.T01 MTR_7g016640 28.755 233 111 7 217 394 14 246 1.65e-14 75.5
MsG0780038853.01.T01 MTR_7g016640 30.075 266 155 7 135 393 172 413 4.01e-13 70.9
MsG0780038853.01.T01 MTR_7g016640 28.755 233 111 7 217 394 14 246 2.09e-14 74.7
MsG0780038853.01.T01 MTR_7g016640 30.738 244 138 7 135 371 172 391 1.26e-11 66.2
MsG0780038853.01.T01 MTR_3g113250 22.837 289 152 7 101 373 44 277 4.78e-13 70.9
MsG0780038853.01.T01 MTR_3g113250 25.103 243 142 8 159 394 193 402 7.35e-12 67.4
MsG0780038853.01.T01 MTR_3g113250 29.231 195 108 4 212 391 65 244 9.18e-12 67.0
MsG0780038853.01.T01 MTR_3g109650 23.902 410 207 15 4 371 85 431 1.85e-12 69.3
MsG0780038853.01.T01 MTR_2g079610 23.790 248 152 6 162 394 224 449 2.42e-12 68.6
MsG0780038853.01.T01 MTR_2g079610 25.573 262 139 6 135 358 221 464 2.28e-11 65.5
MsG0780038853.01.T01 MTR_1g006695 27.425 299 154 9 114 394 13 266 4.26e-12 67.8
MsG0780038853.01.T01 MTR_5g020630 32.000 175 93 7 226 391 26 183 2.48e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780038853.01.T01 AT3G53830 53.616 401 131 8 5 396 118 472 2.23e-142 414
MsG0780038853.01.T01 AT3G53830 50.467 428 129 9 5 395 118 499 3.03e-137 402
MsG0780038853.01.T01 AT3G55580 52.835 388 140 7 9 391 134 483 2.02e-129 381
MsG0780038853.01.T01 AT3G53830 53.776 331 114 7 5 326 118 418 5.56e-113 337
MsG0780038853.01.T01 AT3G53830 35.220 159 89 5 248 392 205 363 2.80e-13 71.2
MsG0780038853.01.T01 AT3G53830 49.861 359 113 8 5 326 118 446 6.43e-108 325
MsG0780038853.01.T01 AT3G53830 35.220 159 89 5 248 392 233 391 3.78e-13 71.2
MsG0780038853.01.T01 AT5G63860 34.728 239 114 5 153 389 39 237 1.66e-35 135
MsG0780038853.01.T01 AT5G63860 29.333 300 155 5 96 394 103 346 3.72e-35 134
MsG0780038853.01.T01 AT5G63860 28.819 288 149 3 84 371 143 374 2.08e-33 130
MsG0780038853.01.T01 AT5G19420 32.804 189 109 3 207 393 314 486 3.73e-23 102
MsG0780038853.01.T01 AT5G19420 29.123 285 148 10 113 392 312 547 1.27e-19 91.7
MsG0780038853.01.T01 AT5G19420 25.952 289 145 6 109 384 413 645 3.87e-17 84.3
MsG0780038853.01.T01 AT5G19420 24.675 231 142 6 96 324 452 652 4.53e-11 65.5
MsG0780038853.01.T01 AT5G19420 32.804 189 109 3 207 393 348 520 4.29e-23 102
MsG0780038853.01.T01 AT5G19420 29.123 285 148 10 113 392 346 581 1.43e-19 91.7
MsG0780038853.01.T01 AT5G19420 25.952 289 145 6 109 384 447 679 4.55e-17 84.0
MsG0780038853.01.T01 AT5G19420 24.891 229 140 6 96 322 486 684 5.04e-11 65.1
MsG0780038853.01.T01 AT5G19420 32.804 189 109 3 207 393 314 486 4.96e-23 102
MsG0780038853.01.T01 AT5G19420 29.123 285 148 10 113 392 312 547 1.97e-19 90.9
MsG0780038853.01.T01 AT5G19420 25.952 289 145 6 109 384 413 645 5.73e-17 83.6
MsG0780038853.01.T01 AT5G19420 24.464 233 144 6 96 326 452 654 6.87e-11 64.7
MsG0780038853.01.T01 AT5G12350 33.333 189 108 3 207 393 310 482 5.39e-23 102
MsG0780038853.01.T01 AT5G12350 29.123 285 148 10 113 392 308 543 8.20e-20 92.4
MsG0780038853.01.T01 AT5G12350 26.644 289 143 6 109 384 409 641 4.71e-18 87.0
MsG0780038853.01.T01 AT5G12350 24.464 233 144 6 96 326 448 650 1.31e-11 67.0
MsG0780038853.01.T01 AT1G69710 33.014 209 108 6 201 394 390 581 3.48e-22 99.4
MsG0780038853.01.T01 AT1G69710 26.271 236 147 3 96 331 429 637 3.63e-14 75.1
MsG0780038853.01.T01 AT1G69710 33.014 209 108 6 201 394 403 594 3.87e-22 99.4
MsG0780038853.01.T01 AT1G69710 26.271 236 147 3 96 331 442 650 4.28e-14 74.7
MsG0780038853.01.T01 AT1G76950 36.979 192 100 5 207 393 283 458 5.98e-21 95.9
MsG0780038853.01.T01 AT1G76950 29.924 264 147 9 135 391 286 518 3.01e-19 90.5
MsG0780038853.01.T01 AT1G76950 28.155 206 115 5 198 388 434 621 1.55e-14 76.3
MsG0780038853.01.T01 AT5G16040 29.537 281 135 10 153 394 10 266 6.65e-21 93.2
MsG0780038853.01.T01 AT5G16040 26.909 275 140 9 103 373 81 298 1.30e-15 77.8
MsG0780038853.01.T01 AT5G16040 29.537 281 135 10 153 394 10 266 1.29e-20 93.2
MsG0780038853.01.T01 AT5G16040 25.418 299 160 10 133 391 42 317 2.80e-15 77.4
MsG0780038853.01.T01 AT5G16040 24.235 425 197 13 5 393 52 387 3.12e-15 77.0
MsG0780038853.01.T01 AT5G42140 34.555 191 105 4 207 393 279 453 3.27e-20 93.6
MsG0780038853.01.T01 AT5G42140 27.241 290 156 8 109 384 363 611 1.90e-17 85.1
MsG0780038853.01.T01 AT5G42140 29.487 156 90 3 240 391 260 399 2.56e-11 66.2
MsG0780038853.01.T01 AT5G42140 34.555 191 105 4 207 393 279 453 3.27e-20 93.6
MsG0780038853.01.T01 AT5G42140 27.241 290 156 8 109 384 363 611 1.90e-17 85.1
MsG0780038853.01.T01 AT5G42140 29.487 156 90 3 240 391 260 399 2.56e-11 66.2
MsG0780038853.01.T01 AT4G14368 34.555 191 105 4 207 393 272 446 4.12e-20 93.2
MsG0780038853.01.T01 AT4G14368 28.226 248 127 5 148 384 396 603 1.66e-16 82.0
MsG0780038853.01.T01 AT4G14368 26.885 305 159 7 109 394 302 561 1.89e-15 79.0
MsG0780038853.01.T01 AT4G14368 22.979 235 151 3 96 330 412 616 3.33e-12 68.9
MsG0780038853.01.T01 AT4G14368 34.555 191 105 4 207 393 265 439 4.23e-20 93.2
MsG0780038853.01.T01 AT4G14368 28.226 248 127 5 148 384 389 596 1.75e-16 82.0
MsG0780038853.01.T01 AT4G14368 26.885 305 159 7 109 394 295 554 1.96e-15 79.0
MsG0780038853.01.T01 AT4G14368 22.979 235 151 3 96 330 405 609 3.24e-12 68.9
MsG0780038853.01.T01 AT4G14368 34.555 191 105 4 207 393 272 446 4.26e-20 93.2
MsG0780038853.01.T01 AT4G14368 27.823 248 128 5 148 384 396 603 1.91e-16 82.0
MsG0780038853.01.T01 AT4G14368 26.885 305 159 7 109 394 302 561 1.92e-15 79.0
MsG0780038853.01.T01 AT4G14368 22.979 235 151 3 96 330 412 616 9.41e-12 67.4
MsG0780038853.01.T01 AT4G14368 34.555 191 105 4 207 393 270 444 4.28e-20 93.2
MsG0780038853.01.T01 AT4G14368 28.226 248 127 5 148 384 394 601 1.70e-16 82.0
MsG0780038853.01.T01 AT4G14368 26.885 305 159 7 109 394 300 559 1.89e-15 79.0
MsG0780038853.01.T01 AT4G14368 22.979 235 151 3 96 330 410 614 3.30e-12 68.9
MsG0780038853.01.T01 AT1G19880 24.863 366 188 10 81 394 78 408 1.47e-19 90.9
MsG0780038853.01.T01 AT1G19880 23.051 295 150 8 101 373 44 283 2.44e-12 68.9
MsG0780038853.01.T01 AT1G19880 28.218 202 107 5 212 391 65 250 8.67e-11 63.9
MsG0780038853.01.T01 AT1G65920 25.850 294 168 8 102 392 281 527 1.58e-19 91.3
MsG0780038853.01.T01 AT1G65920 25.952 289 145 6 109 384 391 623 1.23e-15 79.3
MsG0780038853.01.T01 AT1G65920 30.366 191 109 5 207 393 294 464 1.29e-11 67.0
MsG0780038853.01.T01 AT1G65920 25.862 232 140 5 101 330 435 636 2.42e-11 66.2
MsG0780038853.01.T01 AT1G65920 25.850 294 168 8 102 392 235 481 1.86e-19 91.3
MsG0780038853.01.T01 AT1G65920 25.952 289 145 6 109 384 345 577 1.34e-15 79.3
MsG0780038853.01.T01 AT1G65920 30.366 191 109 5 207 393 248 418 1.38e-11 67.0
MsG0780038853.01.T01 AT1G65920 25.862 232 140 5 101 330 389 590 2.63e-11 65.9
MsG0780038853.01.T01 AT3G23270 33.508 191 107 4 207 393 257 431 4.97e-19 90.1
MsG0780038853.01.T01 AT3G23270 28.618 304 152 11 137 394 262 546 6.32e-16 80.5
MsG0780038853.01.T01 AT3G23270 27.414 321 169 10 109 384 287 588 8.52e-15 77.0
MsG0780038853.01.T01 AT3G23270 33.508 191 107 4 207 393 253 427 5.53e-19 89.7
MsG0780038853.01.T01 AT3G23270 28.618 304 152 11 137 394 258 542 6.54e-16 80.5
MsG0780038853.01.T01 AT3G23270 27.414 321 169 10 109 384 283 584 9.38e-15 76.6
MsG0780038853.01.T01 AT3G26100 27.333 300 165 10 131 393 45 328 6.99e-19 88.6
MsG0780038853.01.T01 AT3G26100 22.300 287 166 6 82 366 121 352 8.32e-11 63.9
MsG0780038853.01.T01 AT3G26100 27.333 300 165 10 131 393 45 328 6.99e-19 88.6
MsG0780038853.01.T01 AT3G26100 22.300 287 166 6 82 366 121 352 8.32e-11 63.9
MsG0780038853.01.T01 AT3G26100 27.333 300 165 10 131 393 45 328 6.99e-19 88.6
MsG0780038853.01.T01 AT3G26100 22.300 287 166 6 82 366 121 352 8.32e-11 63.9
MsG0780038853.01.T01 AT3G47660 29.779 272 151 8 126 392 152 388 8.01e-19 89.0
MsG0780038853.01.T01 AT3G47660 29.779 272 151 8 126 392 294 530 8.32e-19 89.4
MsG0780038853.01.T01 AT3G47660 29.779 272 151 8 126 392 294 530 8.32e-19 89.4
MsG0780038853.01.T01 AT1G27060 27.046 281 136 6 149 391 16 265 8.64e-19 87.8
MsG0780038853.01.T01 AT1G27060 27.609 297 144 8 96 384 135 368 3.42e-17 82.8
MsG0780038853.01.T01 AT3G47660 29.779 272 151 8 126 392 297 533 8.72e-19 89.0
MsG0780038853.01.T01 AT3G26100 27.333 300 165 10 131 393 145 428 8.83e-19 88.6
MsG0780038853.01.T01 AT3G26100 22.378 286 165 6 82 365 221 451 6.83e-11 64.3
MsG0780038853.01.T01 AT3G26100 27.333 300 165 10 131 393 145 428 8.83e-19 88.6
MsG0780038853.01.T01 AT3G26100 22.378 286 165 6 82 365 221 451 6.83e-11 64.3
MsG0780038853.01.T01 AT3G26100 27.333 300 165 10 131 393 145 428 8.83e-19 88.6
MsG0780038853.01.T01 AT3G26100 22.378 286 165 6 82 365 221 451 6.83e-11 64.3
MsG0780038853.01.T01 AT3G47660 30.303 264 144 8 126 384 219 447 9.90e-19 89.0
MsG0780038853.01.T01 AT3G47660 31.694 183 105 4 210 388 226 392 1.92e-18 88.2
MsG0780038853.01.T01 AT3G47660 29.779 272 151 8 126 392 297 533 1.11e-18 89.0
MsG0780038853.01.T01 AT3G47660 30.303 264 144 8 126 384 333 561 1.61e-18 88.2
MsG0780038853.01.T01 AT3G47660 31.694 183 105 4 210 388 340 506 2.85e-18 87.4
MsG0780038853.01.T01 AT3G02510 27.758 281 140 9 153 394 10 266 2.61e-18 86.3
MsG0780038853.01.T01 AT3G02510 23.641 423 202 13 5 393 52 387 1.82e-15 77.8
MsG0780038853.01.T01 AT3G02510 27.106 273 140 7 104 373 82 298 1.41e-16 80.1
MsG0780038853.01.T01 AT3G02510 25.806 279 148 9 153 394 10 266 1.20e-14 74.7
MsG0780038853.01.T01 AT5G08710 25.455 330 157 8 115 396 84 372 5.81e-16 79.7
MsG0780038853.01.T01 AT5G08710 31.361 169 95 5 229 393 54 205 1.40e-11 66.2
MsG0780038853.01.T01 AT3G03790 27.059 255 135 8 149 393 154 367 1.98e-15 79.0
MsG0780038853.01.T01 AT3G03790 27.059 255 135 8 149 393 151 364 2.08e-15 79.0
MsG0780038853.01.T01 AT3G03790 27.059 255 135 8 149 393 154 367 2.25e-15 78.6
MsG0780038853.01.T01 AT3G02510 25.090 279 144 5 134 393 97 329 3.52e-15 76.6
MsG0780038853.01.T01 AT3G02510 27.861 201 115 6 202 394 30 208 3.38e-13 70.5
MsG0780038853.01.T01 AT5G60870 25.231 325 179 8 96 381 135 434 1.48e-14 75.5
MsG0780038853.01.T01 AT5G60870 27.985 268 144 8 135 394 106 332 3.10e-13 71.2
MsG0780038853.01.T01 AT5G60870 25.168 298 157 6 96 359 135 400 4.49e-14 73.9
MsG0780038853.01.T01 AT5G60870 27.985 268 144 8 135 394 106 332 2.78e-13 71.6
MsG0780038853.01.T01 AT5G60870 28.042 189 95 3 113 300 262 410 5.03e-12 67.8
MsG0780038853.01.T01 AT5G48330 32.022 178 91 7 226 391 46 205 7.51e-14 73.2
MsG0780038853.01.T01 AT5G48330 26.582 316 159 10 104 391 181 451 1.10e-13 72.8
MsG0780038853.01.T01 AT5G48330 31.844 179 91 7 226 391 46 206 9.70e-14 72.8
MsG0780038853.01.T01 AT5G48330 27.206 272 141 9 148 391 210 452 1.22e-13 72.8
MsG0780038853.01.T01 AT5G60870 27.985 268 144 8 135 394 106 332 2.53e-13 71.2
MsG0780038853.01.T01 AT5G60870 25.000 264 148 5 96 325 135 382 1.27e-12 69.3
MsG0780038853.01.T01 AT3G15430 28.571 196 120 4 202 393 213 392 4.67e-13 70.9
MsG0780038853.01.T01 AT3G15430 28.571 196 120 4 202 393 213 392 4.67e-13 70.9
MsG0780038853.01.T01 AT3G15430 28.571 196 120 4 202 393 213 392 4.67e-13 70.9
MsG0780038853.01.T01 AT3G15430 28.571 196 120 4 202 393 213 392 4.67e-13 70.9
MsG0780038853.01.T01 AT3G15430 28.571 196 120 4 202 393 213 392 4.67e-13 70.9
MsG0780038853.01.T01 AT3G15430 28.571 196 120 4 202 393 213 392 4.67e-13 70.9
MsG0780038853.01.T01 AT5G60870 27.778 180 109 3 207 381 95 258 1.18e-12 68.2
MsG0780038853.01.T01 AT5G60870 28.042 189 95 3 113 300 93 241 1.98e-12 67.4
MsG0780038853.01.T01 AT3G02300 26.692 266 164 7 135 393 171 412 1.46e-12 69.3
MsG0780038853.01.T01 AT3G02300 26.692 266 164 7 135 393 182 423 1.52e-12 69.3
MsG0780038853.01.T01 AT5G11580 26.524 328 170 13 97 394 55 341 1.67e-12 69.3
MsG0780038853.01.T01 AT5G11580 27.273 308 147 12 89 371 175 430 2.93e-12 68.6
MsG0780038853.01.T01 AT5G08710 25.172 290 130 7 115 358 84 332 1.72e-12 68.6
MsG0780038853.01.T01 AT5G08710 31.361 169 95 5 229 393 54 205 6.68e-12 66.6
MsG0780038853.01.T01 AT5G11580 27.273 308 147 12 89 371 24 279 1.77e-12 68.9

Find 129 sgRNAs with CRISPR-Local

Find 380 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTCTAGTTTCTTCTTTAT+TGG 0.126697 7:+54095289 MsG0780038853.01.T01:CDS
CAGACCATCAAAAGTGATTT+TGG 0.163828 7:-54096718 None:intergenic
CCTTCTCGAGTTTCTATTTC+CGG 0.165664 7:+54096558 MsG0780038853.01.T01:CDS
TCATGTGTCGAGTCTGCTTC+TGG 0.194022 7:+54092910 MsG0780038853.01.T01:CDS
ATAAATTCTCATCCATTTAA+TGG 0.221841 7:-54096913 None:intergenic
TGTGGGACAGGTCTGGGGTT+GGG 0.221861 7:+54092819 MsG0780038853.01.T01:CDS
GTGGGACAGGTCTGGGGTTG+GGG 0.227727 7:+54092820 MsG0780038853.01.T01:CDS
ACTGGGGCTCTTCTTACTTT+TGG 0.240612 7:+54093290 MsG0780038853.01.T01:CDS
TACTAGTGTTTGGGCTTTGC+GGG 0.242433 7:-54092214 None:intergenic
CAACCACAAGCAACATTTCT+TGG 0.258870 7:-54096588 None:intergenic
CAGGTCTGGGGTTGGGGCTA+TGG 0.266390 7:+54092826 MsG0780038853.01.T01:CDS
AAGATGGTGATGTGTATTTA+TGG 0.277983 7:+54091977 MsG0780038853.01.T01:CDS
TCTACCTGGGCAGCTTGGTT+TGG 0.280373 7:+54096512 MsG0780038853.01.T01:intron
GTTTCCCAGCCACATCCTTT+TGG 0.291945 7:-54092062 None:intergenic
TTCAGATGTGGGACAGGTCT+GGG 0.296064 7:+54092813 MsG0780038853.01.T01:CDS
CTACCTGGGCAGCTTGGTTT+GGG 0.301324 7:+54096513 MsG0780038853.01.T01:intron
AATGGTCAACTTTACGCTTT+TGG 0.304862 7:+54095368 MsG0780038853.01.T01:CDS
ACTCTAGTTTCTTCTTTATT+GGG 0.309060 7:+54095290 MsG0780038853.01.T01:CDS
TAAAGTATACTACCATTAAA+TGG 0.331107 7:+54096901 MsG0780038853.01.T01:three_prime_UTR
ACATTGTGTGTTACTGTAAA+TGG 0.333974 7:+54095350 MsG0780038853.01.T01:CDS
TCAAAAGTATCCAGCAGTTT+AGG 0.334250 7:-54096015 None:intergenic
CGTCATAGTGCTTTGCTAAC+AGG 0.341383 7:+54096072 MsG0780038853.01.T01:CDS
CTCTTGTTACCCTTGGCCAT+GGG 0.345928 7:+54092366 MsG0780038853.01.T01:CDS
TCCCCTTCTCTTGTTACCCT+TGG 0.346909 7:+54092359 MsG0780038853.01.T01:CDS
TGGGAATCAGTTTGGACAAT+TGG 0.347996 7:+54095391 MsG0780038853.01.T01:CDS
TGGAAAGAATGTGTGCCTTC+TGG 0.350425 7:+54092003 MsG0780038853.01.T01:CDS
ACATGAGAAGGGTTTCAGTT+TGG 0.358571 7:+54096825 MsG0780038853.01.T01:three_prime_UTR
TTTCAGATGTGGGACAGGTC+TGG 0.362592 7:+54092812 MsG0780038853.01.T01:CDS
ACATGGGGATGGAACAAATA+TGG 0.366200 7:+54096416 MsG0780038853.01.T01:CDS
GGAAGAATCTTTCTGCTGTT+TGG 0.371087 7:+54097016 MsG0780038853.01.T01:three_prime_UTR
CGGACCCACTACTAGTGTTT+GGG 0.382384 7:-54092223 None:intergenic
CTACTAGTGTTTGGGCTTTG+CGG 0.389581 7:-54092215 None:intergenic
TCGGACCCACTACTAGTGTT+TGG 0.394727 7:-54092224 None:intergenic
GGCGAAGGACAGCTAGGTTT+GGG 0.396249 7:+54092850 MsG0780038853.01.T01:CDS
AACATTTCTTGGTCGGCAAC+CGG 0.397762 7:-54096577 None:intergenic
GTCTGGGGTTGGGGCTATGG+AGG 0.405727 7:+54092829 MsG0780038853.01.T01:CDS
TCATTTCTAGATTGTAGCTT+GGG 0.406334 7:+54096782 MsG0780038853.01.T01:three_prime_UTR
GAAGATCTCATTTGCCAAAC+AGG 0.407191 7:+54092295 MsG0780038853.01.T01:CDS
CGGCACAGCGCTGTAATAAC+AGG 0.409597 7:+54093024 MsG0780038853.01.T01:CDS
TTTATTCTTCTGAGGGTTAG+TGG 0.410759 7:+54096931 MsG0780038853.01.T01:three_prime_UTR
CTTCAATGTTCTAATGTAGC+TGG 0.419672 7:+54092970 MsG0780038853.01.T01:CDS
ATGTGGGACAGGTCTGGGGT+TGG 0.420641 7:+54092818 MsG0780038853.01.T01:CDS
AACAAATTGCTGCTGGACTT+TGG 0.421922 7:+54095324 MsG0780038853.01.T01:CDS
GGGAATCAGTTTGGACAATT+GGG 0.428383 7:+54095392 MsG0780038853.01.T01:CDS
TTTCGAGCATAGTTTCTTGT+GGG 0.428705 7:+54096046 MsG0780038853.01.T01:CDS
AGGCGAAGGACAGCTAGGTT+TGG 0.431034 7:+54092849 MsG0780038853.01.T01:CDS
ATTGTAGCTTGGGACTAACT+TGG 0.438132 7:+54096792 MsG0780038853.01.T01:three_prime_UTR
TTGACTATCAGACTCCTGTT+TGG 0.441256 7:-54092309 None:intergenic
TGGCTGGGGTCTGCATGGAC+AGG 0.441974 7:+54093310 MsG0780038853.01.T01:CDS
GCGGGTGAATTGCGTCAAAC+AGG 0.446637 7:-54096639 None:intergenic
CATGTGTCGAGTCTGCTTCT+GGG 0.450746 7:+54092911 MsG0780038853.01.T01:CDS
TTGCGGATTGCGGAAAATAG+TGG 0.451736 7:+54092460 MsG0780038853.01.T01:CDS
TTGGTGGCATACACTGTTGA+TGG 0.461517 7:+54096608 MsG0780038853.01.T01:CDS
AGGCATACCTTGGCACTGTC+AGG 0.463578 7:+54092419 MsG0780038853.01.T01:CDS
GAGTCTGATAGTCAAACATC+TGG 0.469802 7:+54092317 MsG0780038853.01.T01:CDS
TCTCTTGTTACCCTTGGCCA+TGG 0.471438 7:+54092365 MsG0780038853.01.T01:CDS
CAGTTTGGACAATTGGGTAC+TGG 0.472145 7:+54095398 MsG0780038853.01.T01:CDS
TCAGACTTCACCTAAACTGC+TGG 0.480708 7:+54096005 MsG0780038853.01.T01:intron
AAGAAAGTTGTAGAGGAAGC+TGG 0.483221 7:+54092263 MsG0780038853.01.T01:CDS
GATGAGAATTTATTCTTCTG+AGG 0.489156 7:+54096923 MsG0780038853.01.T01:three_prime_UTR
CTTTCGAGCATAGTTTCTTG+TGG 0.489846 7:+54096045 MsG0780038853.01.T01:CDS
TGTTCCATCCCCATGTGAAA+AGG 0.490558 7:-54096409 None:intergenic
TTCATTTCTAGATTGTAGCT+TGG 0.490730 7:+54096781 MsG0780038853.01.T01:three_prime_UTR
AGCCTCCAAAAGGATGTGGC+TGG 0.497754 7:+54092057 MsG0780038853.01.T01:CDS
GTGATGTGTATTTATGGGGC+TGG 0.500200 7:+54091983 MsG0780038853.01.T01:CDS
CACTGTGGGAAGCCTCCAAA+AGG 0.506899 7:+54092047 MsG0780038853.01.T01:CDS
AGATGGTGATGTGTATTTAT+GGG 0.509013 7:+54091978 MsG0780038853.01.T01:CDS
CTTGTTGTCATGATGAGAGT+CGG 0.516083 7:-54092243 None:intergenic
AGAGTGAAACAAATTGCTGC+TGG 0.528462 7:+54095317 MsG0780038853.01.T01:CDS
GAAACCTTCTTGATGCTAGC+GGG 0.531604 7:-54096657 None:intergenic
TGGCCAAGGGTAACAAGAGA+AGG 0.532632 7:-54092362 None:intergenic
TTGTAATATCCTTTGTGCAA+TGG 0.533786 7:+54096995 MsG0780038853.01.T01:three_prime_UTR
CAAAGCCCAAACACTAGTAG+TGG 0.534520 7:+54092218 MsG0780038853.01.T01:CDS
GAAATGTTGCTTGTGGTTGG+TGG 0.534861 7:+54096592 MsG0780038853.01.T01:CDS
CACAAGCAACATTTCTTGGT+CGG 0.534889 7:-54096584 None:intergenic
GCCTCCAAAAGGATGTGGCT+GGG 0.537760 7:+54092058 MsG0780038853.01.T01:CDS
ATGAGAATTTATTCTTCTGA+GGG 0.542110 7:+54096924 MsG0780038853.01.T01:three_prime_UTR
TCAGATGTGGGACAGGTCTG+GGG 0.543096 7:+54092814 MsG0780038853.01.T01:CDS
GGAAACCTTCTTGATGCTAG+CGG 0.546008 7:-54096658 None:intergenic
GTTACCTCTGTAGCAGTTGG+TGG 0.546181 7:+54092395 MsG0780038853.01.T01:CDS
ACATTTCATTAATGAAATGT+CGG 0.547370 7:-54096687 None:intergenic
TTTGGGTTCTCGAGTCAAGA+TGG 0.547551 7:+54092867 MsG0780038853.01.T01:CDS
TTTACTGATCTCATCACTGT+GGG 0.548101 7:+54092033 MsG0780038853.01.T01:CDS
CGGAAATAGCATGCGGAGGT+CGG 0.551316 7:+54093004 MsG0780038853.01.T01:CDS
CCTCCCACCAACTGCTACAG+AGG 0.553978 7:-54092399 None:intergenic
TTCACCCGCTAGCATCAAGA+AGG 0.554689 7:+54096653 MsG0780038853.01.T01:three_prime_UTR
GGAGATCTGAGAACATGAGA+AGG 0.555687 7:+54096813 MsG0780038853.01.T01:three_prime_UTR
GGGATGGAACAAATATGGCC+AGG 0.566147 7:+54096421 MsG0780038853.01.T01:CDS
TCTTGTTACCCTTGGCCATG+GGG 0.570082 7:+54092367 MsG0780038853.01.T01:CDS
GGCCAAGGGTAACAAGAGAA+GGG 0.578654 7:-54092361 None:intergenic
TAACTTTCACCCCATGGCCA+AGG 0.579032 7:-54092376 None:intergenic
AATAAAGAAGAAACTAGAGT+TGG 0.580352 7:-54095287 None:intergenic
AGTTGGTGGGAGGCATACCT+TGG 0.582720 7:+54092409 MsG0780038853.01.T01:CDS
AAATCCAGTGTTGTCAATTG+CGG 0.584116 7:+54092443 MsG0780038853.01.T01:CDS
GAGATCTGAGAACATGAGAA+GGG 0.584655 7:+54096814 MsG0780038853.01.T01:three_prime_UTR
TGTCGAGTCTGCTTCTGGGA+AGG 0.586996 7:+54092915 MsG0780038853.01.T01:CDS
TTAATGAAATGTCGGCTAGT+CGG 0.587967 7:-54096679 None:intergenic
CAAGAAATGTTGCTTGTGGT+TGG 0.588439 7:+54096589 MsG0780038853.01.T01:CDS
CGACACATGAAATAAGATGA+GGG 0.590017 7:-54092897 None:intergenic
TATGGAGGCGAAGGACAGCT+AGG 0.591723 7:+54092844 MsG0780038853.01.T01:CDS
AACTTTCACCCCATGGCCAA+GGG 0.591875 7:-54092375 None:intergenic
GGTTGGGGCTATGGAGGCGA+AGG 0.594654 7:+54092835 MsG0780038853.01.T01:CDS
AAAGTTACCTCTGTAGCAGT+TGG 0.598913 7:+54092392 MsG0780038853.01.T01:CDS
TAGAGGAAGCTGGAAAGCGA+AGG 0.603278 7:+54092273 MsG0780038853.01.T01:CDS
CCTCTGTAGCAGTTGGTGGG+AGG 0.604564 7:+54092399 MsG0780038853.01.T01:CDS
AAATGCGTAAGCATTATAGC+AGG 0.604573 7:-54096365 None:intergenic
GTGTTGTCAATTGCGGATTG+CGG 0.605787 7:+54092450 MsG0780038853.01.T01:CDS
GGGAAGCCTCCAAAAGGATG+TGG 0.606905 7:+54092053 MsG0780038853.01.T01:CDS
ACTGCTGTGTGTGCAGAAGA+TGG 0.607448 7:+54091961 MsG0780038853.01.T01:CDS
CAATCCGCAATTGACAACAC+TGG 0.608446 7:-54092447 None:intergenic
GGCTGGGAAACAAAGTTCAT+CGG 0.612934 7:+54092074 MsG0780038853.01.T01:CDS
TTACCTCTGTAGCAGTTGGT+GGG 0.615021 7:+54092396 MsG0780038853.01.T01:CDS
TGACAACAAGAAAGTTGTAG+AGG 0.617799 7:+54092256 MsG0780038853.01.T01:CDS
AGTTCATCGGTAGCTGAGCA+AGG 0.619835 7:+54092087 MsG0780038853.01.T01:CDS
TTCGAGCATAGTTTCTTGTG+GGG 0.622324 7:+54096047 MsG0780038853.01.T01:CDS
CGACCAAGAAATGTTGCTTG+TGG 0.624191 7:+54096585 MsG0780038853.01.T01:CDS
CAGAGGTAACTTTCACCCCA+TGG 0.632304 7:-54092382 None:intergenic
GCCAAGGGTAACAAGAGAAG+GGG 0.634101 7:-54092360 None:intergenic
GGATTTACCTGACAGTGCCA+AGG 0.642704 7:-54092426 None:intergenic
TGTAGCTGGAAGTTATGTGA+CGG 0.645392 7:+54092984 MsG0780038853.01.T01:CDS
AAGATTCTTCCATTGCACAA+AGG 0.647208 7:-54097004 None:intergenic
AAAGCCCAAACACTAGTAGT+GGG 0.654206 7:+54092219 MsG0780038853.01.T01:CDS
TCGACACATGAAATAAGATG+AGG 0.659595 7:-54092898 None:intergenic
GATGGTGATGTGTATTTATG+GGG 0.664622 7:+54091979 MsG0780038853.01.T01:CDS
CCGGAAATAGAAACTCGAGA+AGG 0.680540 7:-54096558 None:intergenic
GTGACGGAAATAGCATGCGG+AGG 0.685015 7:+54093000 MsG0780038853.01.T01:CDS
GACACATGAAATAAGATGAG+GGG 0.686519 7:-54092896 None:intergenic
TACTGGTAATGATCAAACTG+AGG 0.700185 7:+54095415 MsG0780038853.01.T01:CDS
TATGTGACGGAAATAGCATG+CGG 0.728094 7:+54092997 MsG0780038853.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAAAAATGTATAAATAAA+GGG - Chr7:54094368-54094387 None:intergenic 10.0%
!! ATAAATAATTTAACAAAAAC+GGG + Chr7:54092136-54092155 MsG0780038853.01.T01:intron 10.0%
!! CATAAATAATTTAACAAAAA+CGG + Chr7:54092135-54092154 MsG0780038853.01.T01:intron 10.0%
!! TAAGAAAAATGTATAAATAA+AGG - Chr7:54094369-54094388 None:intergenic 10.0%
!! AAAATTGTGTCAATTAAATT+GGG + Chr7:54094405-54094424 MsG0780038853.01.T01:intron 15.0%
!! AGAAAAATGTATAAATAAAG+GGG - Chr7:54094367-54094386 None:intergenic 15.0%
!! ATTTAGTGTTATATTGTATT+GGG - Chr7:54094303-54094322 None:intergenic 15.0%
!! TATTTAGTGTTATATTGTAT+TGG - Chr7:54094304-54094323 None:intergenic 15.0%
!! TTAAAAGATTACCTTAAAAA+GGG + Chr7:54095842-54095861 MsG0780038853.01.T01:intron 15.0%
!! TTGTTTAGTTAAGATTTATA+CGG + Chr7:54094026-54094045 MsG0780038853.01.T01:intron 15.0%
!!! AAATGTAAAAGCTTTATATA+TGG - Chr7:54093981-54094000 None:intergenic 15.0%
!!! ATCTAACATTGTTTTAATTA+TGG + Chr7:54096875-54096894 MsG0780038853.01.T01:three_prime_UTR 15.0%
!!! ATCTATAATACTATTTCTTT+TGG + Chr7:54093788-54093807 MsG0780038853.01.T01:intron 15.0%
!! AAAAAAGACAATGTCTAATT+AGG + Chr7:54094825-54094844 MsG0780038853.01.T01:intron 20.0%
!! AAAGTGGAATATATTGTATT+GGG - Chr7:54094344-54094363 None:intergenic 20.0%
!! ACAAAATATTGTGAAATAGT+GGG - Chr7:54092529-54092548 None:intergenic 20.0%
!! ACATTTCATTAATGAAATGT+CGG - Chr7:54096709-54096690 None:intergenic 20.0%
!! ACTAATTATAACGATATTCT+AGG + Chr7:54092670-54092689 MsG0780038853.01.T01:intron 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG - Chr7:54094271-54094290 None:intergenic 20.0%
!! ATAAATTCTCATCCATTTAA+TGG - Chr7:54096916-54096935 None:intergenic 20.0%
!! ATAAGACGAATAAGATATAT+GGG + Chr7:54094462-54094481 MsG0780038853.01.T01:intron 20.0%
!! ATATTGTATGAATGAAGTAT+TGG - Chr7:54094857-54094876 None:intergenic 20.0%
!! ATGAGAAAATTAAGTTCTAT+TGG - Chr7:54095518-54095537 None:intergenic 20.0%
!! CAAAATTGTGTCAATTAAAT+TGG + Chr7:54094404-54094423 MsG0780038853.01.T01:intron 20.0%
!! CTTAAAAGATTACCTTAAAA+AGG + Chr7:54095841-54095860 MsG0780038853.01.T01:intron 20.0%
!! GTTGTATTGAAAATTGAAAT+GGG - Chr7:54094270-54094289 None:intergenic 20.0%
!! TAAAGTATACTACCATTAAA+TGG + Chr7:54096901-54096920 MsG0780038853.01.T01:three_prime_UTR 20.0%
!! TTTGTATAAATAAAGCCATT+TGG + Chr7:54093642-54093661 MsG0780038853.01.T01:intron 20.0%
!!! AATTAGACATTGTCTTTTTT+TGG - Chr7:54094825-54094844 None:intergenic 20.0%
!!! ACAACTTTTTAAACATGATA+GGG + Chr7:54095592-54095611 MsG0780038853.01.T01:intron 20.0%
!!! GAAATAATTTTCAGGTAATT+TGG - Chr7:54095915-54095934 None:intergenic 20.0%
!!! GAAGTATTAATATTTTGCTT+CGG - Chr7:54094094-54094113 None:intergenic 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG - Chr7:54094234-54094253 None:intergenic 20.0%
!!! GCTTTATTTATACAAACTAA+GGG - Chr7:54093638-54093657 None:intergenic 20.0%
!!! GTCATATTATATAGTTTTGT+AGG + Chr7:54092714-54092733 MsG0780038853.01.T01:intron 20.0%
!!! TACAACTTTTTAAACATGAT+AGG + Chr7:54095591-54095610 MsG0780038853.01.T01:intron 20.0%
! AAATATTTCAACACCTAATC+TGG - Chr7:54094552-54094571 None:intergenic 25.0%
! AACTATATAATATGACCACA+AGG - Chr7:54092710-54092729 None:intergenic 25.0%
! AATAAAGAAGAAACTAGAGT+TGG - Chr7:54095290-54095309 None:intergenic 25.0%
! AATATACATAATCAAGACTC+TGG - Chr7:54095881-54095900 None:intergenic 25.0%
! AATATTTCAACACCTAATCT+GGG - Chr7:54094551-54094570 None:intergenic 25.0%
! AATTCAGTTAGGAATCTTAT+TGG + Chr7:54093677-54093696 MsG0780038853.01.T01:intron 25.0%
! ACATTTAGTAACTGATATAC+AGG - Chr7:54093178-54093197 None:intergenic 25.0%
! ATGAGAATTTATTCTTCTGA+GGG + Chr7:54096924-54096943 MsG0780038853.01.T01:three_prime_UTR 25.0%
! CACAAAATATTGTGAAATAG+TGG - Chr7:54092530-54092549 None:intergenic 25.0%
! CATTTAGTAACTGATATACA+GGG - Chr7:54093177-54093196 None:intergenic 25.0%
! CTAACACTGTTAAATGAATT+AGG - Chr7:54095761-54095780 None:intergenic 25.0%
! CTCATGCTTAAACTATAAAA+TGG + Chr7:54094507-54094526 MsG0780038853.01.T01:intron 25.0%
! CTCATTGTAATAATTACTTC+AGG - Chr7:54096458-54096477 None:intergenic 25.0%
! CTTCAGAAATTAATTTAGCA+TGG - Chr7:54096199-54096218 None:intergenic 25.0%
! GAAAGTGGAATATATTGTAT+TGG - Chr7:54094345-54094364 None:intergenic 25.0%
! GAAATATTTGAATCCTACTT+GGG + Chr7:54094563-54094582 MsG0780038853.01.T01:intron 25.0%
! GATAAGACGAATAAGATATA+TGG + Chr7:54094461-54094480 MsG0780038853.01.T01:intron 25.0%
! GATGCTAACAAAAACAATAA+GGG + Chr7:54096847-54096866 MsG0780038853.01.T01:three_prime_UTR 25.0%
! GGGAGTAATATATAACAAAA+TGG - Chr7:54094192-54094211 None:intergenic 25.0%
! TAACAAAAACAATAAGGGTT+AGG + Chr7:54096852-54096871 MsG0780038853.01.T01:three_prime_UTR 25.0%
! TAAGATATATGGGAAACAAA+AGG + Chr7:54094472-54094491 MsG0780038853.01.T01:intron 25.0%
! TATAGAAAACAATGTCACAT+AGG + Chr7:54093947-54093966 MsG0780038853.01.T01:intron 25.0%
! TGAAATATTTGAATCCTACT+TGG + Chr7:54094562-54094581 MsG0780038853.01.T01:intron 25.0%
! TGTTTGTTTAACAATGATTC+AGG - Chr7:54095462-54095481 None:intergenic 25.0%
! TTCAGTACTTGAAATCAATT+TGG + Chr7:54096219-54096238 MsG0780038853.01.T01:intron 25.0%
! TTCTACAACTTCTTTAAACA+TGG + Chr7:54095484-54095503 MsG0780038853.01.T01:intron 25.0%
! TTTAGTACTCTAAATCAGAT+TGG + Chr7:54096154-54096173 MsG0780038853.01.T01:intron 25.0%
!! AACTCTAGTTTCTTCTTTAT+TGG + Chr7:54095289-54095308 MsG0780038853.01.T01:CDS 25.0%
!! ACTCTAGTTTCTTCTTTATT+GGG + Chr7:54095290-54095309 MsG0780038853.01.T01:CDS 25.0%
!! AGCTTTTACATTTAATAGAC+AGG + Chr7:54093988-54094007 MsG0780038853.01.T01:intron 25.0%
!! ATATCTGACTTTTTGTGAAA+AGG - Chr7:54093137-54093156 None:intergenic 25.0%
!! CAACTTTTTAAACATGATAG+GGG + Chr7:54095593-54095612 MsG0780038853.01.T01:intron 25.0%
!! CAGAATTTAAGATGTTAAAC+AGG + Chr7:54092188-54092207 MsG0780038853.01.T01:intron 25.0%
!! CATTTTCATATTGAAGATGA+TGG + Chr7:54096383-54096402 MsG0780038853.01.T01:CDS 25.0%
!! GAAAACGAGAAATAATTTTC+AGG - Chr7:54095923-54095942 None:intergenic 25.0%
!! TAAGTCTTTTTGAATCCTAA+AGG + Chr7:54094974-54094993 MsG0780038853.01.T01:intron 25.0%
!! TTTTGTGAAAAGGACATAAA+TGG - Chr7:54093127-54093146 None:intergenic 25.0%
!!! AAATTGCTTTTGTAGATACT+GGG + Chr7:54093273-54093292 MsG0780038853.01.T01:intron 25.0%
!!! ATGCAGTATTTGTATTGATT+AGG + Chr7:54093551-54093570 MsG0780038853.01.T01:intron 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG - Chr7:54094235-54094254 None:intergenic 25.0%
!!! GGCTTTATTTATACAAACTA+AGG - Chr7:54093639-54093658 None:intergenic 25.0%
!!! TAAATCGTTTTTTGTATGTC+TGG + Chr7:54092647-54092666 MsG0780038853.01.T01:intron 25.0%
!!! TAAATTGCTTTTGTAGATAC+TGG + Chr7:54093272-54093291 MsG0780038853.01.T01:intron 25.0%
!!! TCTTTTGGTTCTCTTTAATT+CGG + Chr7:54093803-54093822 MsG0780038853.01.T01:intron 25.0%
!!! TGCAGTAATTTGTATTGATT+AGG + Chr7:54093591-54093610 MsG0780038853.01.T01:intron 25.0%
!!! TTAGGAATCTTATTGGTTTT+GGG + Chr7:54093684-54093703 MsG0780038853.01.T01:intron 25.0%
!!! TTCTACTTTTAGAAACTTGT+TGG + Chr7:54095153-54095172 MsG0780038853.01.T01:intron 25.0%
AACTATAAAATGGACAGAAG+TGG + Chr7:54094517-54094536 MsG0780038853.01.T01:intron 30.0%
AATCTGAAAACAGTACCTTT+AGG - Chr7:54094992-54095011 None:intergenic 30.0%
ACACATGATAACAATGTGAT+AGG - Chr7:54093832-54093851 None:intergenic 30.0%
ACAGTCTACATAATCACTTA+AGG - Chr7:54095658-54095677 None:intergenic 30.0%
ATTTCTAATGATTGTCTACC+TGG + Chr7:54096498-54096517 MsG0780038853.01.T01:intron 30.0%
CACAACAGAATAATTCAGTT+AGG + Chr7:54093666-54093685 MsG0780038853.01.T01:intron 30.0%
CTAACTGAATTATTCTGTTG+TGG - Chr7:54093668-54093687 None:intergenic 30.0%
CTGTAATATACTGAAAAGAC+TGG + Chr7:54094901-54094920 MsG0780038853.01.T01:intron 30.0%
GAAACTACTTTCATTATCGA+CGG - Chr7:54096271-54096290 None:intergenic 30.0%
GATACTATGGCATTATAACT+AGG + Chr7:54095715-54095734 MsG0780038853.01.T01:intron 30.0%
GATGAGAATTTATTCTTCTG+AGG + Chr7:54096923-54096942 MsG0780038853.01.T01:three_prime_UTR 30.0%
GGATGCTAACAAAAACAATA+AGG + Chr7:54096846-54096865 MsG0780038853.01.T01:three_prime_UTR 30.0%
TAAAAAGTTACATGATCTGC+TGG + Chr7:54093101-54093120 MsG0780038853.01.T01:intron 30.0%
TAAACTAAAACCAACAAGTG+AGG - Chr7:54095119-54095138 None:intergenic 30.0%
TGTATAAATAAAGGGGAAAG+TGG - Chr7:54094360-54094379 None:intergenic 30.0%
TTGTAATATCCTTTGTGCAA+TGG + Chr7:54096995-54097014 MsG0780038853.01.T01:three_prime_UTR 30.0%
TTGTGTCAATTAAATTGGGA+CGG + Chr7:54094409-54094428 MsG0780038853.01.T01:intron 30.0%
TTTCATTGCAAATGATCTGA+TGG + Chr7:54093404-54093423 MsG0780038853.01.T01:intron 30.0%
TTTCTAATGATTGTCTACCT+GGG + Chr7:54096499-54096518 MsG0780038853.01.T01:intron 30.0%
! AAGATGGTGATGTGTATTTA+TGG + Chr7:54091977-54091996 MsG0780038853.01.T01:CDS 30.0%
! ACATTGTGTGTTACTGTAAA+TGG + Chr7:54095350-54095369 MsG0780038853.01.T01:CDS 30.0%
! AGATGGTGATGTGTATTTAT+GGG + Chr7:54091978-54091997 MsG0780038853.01.T01:CDS 30.0%
! ATTCTGATGTTCCCTTTTTA+AGG - Chr7:54095856-54095875 None:intergenic 30.0%
! GACAGTTTAGTCATGAATTT+TGG - Chr7:54095636-54095655 None:intergenic 30.0%
! TCAGTAAAAACTTTTCCAGA+AGG - Chr7:54092021-54092040 None:intergenic 30.0%
! TCATTTCTAGATTGTAGCTT+GGG + Chr7:54096782-54096801 MsG0780038853.01.T01:three_prime_UTR 30.0%
! TTCATTTCTAGATTGTAGCT+TGG + Chr7:54096781-54096800 MsG0780038853.01.T01:three_prime_UTR 30.0%
! TTGAAATGGGTCAGTTATTT+TGG - Chr7:54094257-54094276 None:intergenic 30.0%
! TTGTGATTCTGTTTTCTGAA+GGG - Chr7:54095815-54095834 None:intergenic 30.0%
! TTTGTGATTCTGTTTTCTGA+AGG - Chr7:54095816-54095835 None:intergenic 30.0%
!! AATTGCTTTTGTAGATACTG+GGG + Chr7:54093274-54093293 MsG0780038853.01.T01:intron 30.0%
!! ATGTCCAAAATCACTTTTGA+TGG + Chr7:54096714-54096733 MsG0780038853.01.T01:three_prime_UTR 30.0%
!! TGAAATGGGTCAGTTATTTT+GGG - Chr7:54094256-54094275 None:intergenic 30.0%
!! TTGTATGAATGAAGTATTGG+TGG - Chr7:54094854-54094873 None:intergenic 30.0%
!!! AACATGATAGGGGTTTTTTT+AGG + Chr7:54095603-54095622 MsG0780038853.01.T01:intron 30.0%
!!! CACTTGTTGGTTTTAGTTTA+GGG + Chr7:54095119-54095138 MsG0780038853.01.T01:intron 30.0%
!!! CTTTTAGAAACTTGTTGGAA+TGG + Chr7:54095158-54095177 MsG0780038853.01.T01:intron 30.0%
!!! CTTTTGGTTCTCTTTAATTC+GGG + Chr7:54093804-54093823 MsG0780038853.01.T01:intron 30.0%
!!! GTCTTTTTTTGGCTTTTTGA+TGG - Chr7:54094814-54094833 None:intergenic 30.0%
!!! GTTAGGAATCTTATTGGTTT+TGG + Chr7:54093683-54093702 MsG0780038853.01.T01:intron 30.0%
!!! TAAAGGTACTGTTTTCAGAT+TGG + Chr7:54094991-54095010 MsG0780038853.01.T01:intron 30.0%
!!! TCACTTGTTGGTTTTAGTTT+AGG + Chr7:54095118-54095137 MsG0780038853.01.T01:intron 30.0%
AAATCCAGTGTTGTCAATTG+CGG + Chr7:54092443-54092462 MsG0780038853.01.T01:CDS 35.0%
AAATGCGTAAGCATTATAGC+AGG - Chr7:54096368-54096387 None:intergenic 35.0%
AACACGTGAGAAAAAAGCTT+AGG - Chr7:54095959-54095978 None:intergenic 35.0%
AAGATTCTTCCATTGCACAA+AGG - Chr7:54097007-54097026 None:intergenic 35.0%
ACGTGTTAACCAAGTAACAA+TGG + Chr7:54095972-54095991 MsG0780038853.01.T01:intron 35.0%
ACTCAAAATGCCATATTCCA+AGG - Chr7:54095075-54095094 None:intergenic 35.0%
ACTTGGGTAATATGACAGAT+AGG - Chr7:54094673-54094692 None:intergenic 35.0%
AGAAAACAATGTCACATAGG+TGG + Chr7:54093950-54093969 MsG0780038853.01.T01:intron 35.0%
AGAAAATGGGTCAGTTATTC+CGG - Chr7:54094221-54094240 None:intergenic 35.0%
AGGGAAAAACCATTGTTACT+TGG - Chr7:54095984-54096003 None:intergenic 35.0%
AGTTTAGGTGAAGTCTGAAA+GGG - Chr7:54096003-54096022 None:intergenic 35.0%
ATAGCTGGAAACTAACCTTT+AGG - Chr7:54094777-54094796 None:intergenic 35.0%
ATTATTCTGTTGTGGCCAAA+TGG - Chr7:54093660-54093679 None:intergenic 35.0%
ATTGTTATCATGTGTTCCCA+AGG + Chr7:54093837-54093856 MsG0780038853.01.T01:intron 35.0%
CGACACATGAAATAAGATGA+GGG - Chr7:54092900-54092919 None:intergenic 35.0%
CGGTTAAAATATGTTGCATC+AGG - Chr7:54092788-54092807 None:intergenic 35.0%
CGTCAATTATTACTGGTACA+TGG - Chr7:54094748-54094767 None:intergenic 35.0%
CTTCAATGTTCTAATGTAGC+TGG + Chr7:54092970-54092989 MsG0780038853.01.T01:CDS 35.0%
CTTGGGTAATATGACAGATA+GGG - Chr7:54094672-54094691 None:intergenic 35.0%
GAAAACTCTGACATTGTGTT+AGG + Chr7:54093441-54093460 MsG0780038853.01.T01:intron 35.0%
GACACATGAAATAAGATGAG+GGG - Chr7:54092899-54092918 None:intergenic 35.0%
GATTGTGTAACTAATGCAAG+TGG + Chr7:54095185-54095204 MsG0780038853.01.T01:intron 35.0%
GTAGAGACGTCAATTATTAC+TGG - Chr7:54094755-54094774 None:intergenic 35.0%
TAATTGACGTCTCTACCTAA+AGG + Chr7:54094759-54094778 MsG0780038853.01.T01:intron 35.0%
TACGTGACATTTAACAGTGT+TGG + Chr7:54095687-54095706 MsG0780038853.01.T01:intron 35.0%
TCAGCTTAAACATATCGTCA+GGG - Chr7:54096105-54096124 None:intergenic 35.0%
TCGACACATGAAATAAGATG+AGG - Chr7:54092901-54092920 None:intergenic 35.0%
TCTGACATTGTGTTAGGTAT+CGG + Chr7:54093447-54093466 MsG0780038853.01.T01:intron 35.0%
TGACAACAAGAAAGTTGTAG+AGG + Chr7:54092256-54092275 MsG0780038853.01.T01:CDS 35.0%
TTACTACTTCCTCCTTTACA+AGG - Chr7:54093863-54093882 None:intergenic 35.0%
TTAGCTAAGCAGAAAACTAG+AGG - Chr7:54093370-54093389 None:intergenic 35.0%
TTAGTTTCCAGCTATGTTTG+TGG + Chr7:54094782-54094801 MsG0780038853.01.T01:intron 35.0%
TTCAGCTTAAACATATCGTC+AGG - Chr7:54096106-54096125 None:intergenic 35.0%
TTCTGTGAAGTACGAAGATT+TGG + Chr7:54092737-54092756 MsG0780038853.01.T01:intron 35.0%
TTGGGTAATATGACAGATAG+GGG - Chr7:54094671-54094690 None:intergenic 35.0%
TTGTGCTAAATATCGTATCG+TGG + Chr7:54092545-54092564 MsG0780038853.01.T01:intron 35.0%
TTGTTAAATAGCAGCTGTAG+CGG - Chr7:54092620-54092639 None:intergenic 35.0%
TTTACTGATCTCATCACTGT+GGG + Chr7:54092033-54092052 MsG0780038853.01.T01:CDS 35.0%
TTTCGAGCATAGTTTCTTGT+GGG + Chr7:54096046-54096065 MsG0780038853.01.T01:CDS 35.0%
! AATGGTCAACTTTACGCTTT+TGG + Chr7:54095368-54095387 MsG0780038853.01.T01:CDS 35.0%
! AGCTGCTATTTAACAACACT+TGG + Chr7:54092624-54092643 MsG0780038853.01.T01:intron 35.0%
! CAGACCATCAAAAGTGATTT+TGG - Chr7:54096721-54096740 None:intergenic 35.0%
! GATAAGTCATCTTTTCAGCA+AGG + Chr7:54092937-54092956 MsG0780038853.01.T01:CDS 35.0%
! GATGGTGATGTGTATTTATG+GGG + Chr7:54091979-54091998 MsG0780038853.01.T01:CDS 35.0%
! TAACCGAAGTTTTCAGATGT+GGG + Chr7:54092802-54092821 MsG0780038853.01.T01:intron 35.0%
! TACTGGTAATGATCAAACTG+AGG + Chr7:54095415-54095434 MsG0780038853.01.T01:CDS 35.0%
! TTAACCGAAGTTTTCAGATG+TGG + Chr7:54092801-54092820 MsG0780038853.01.T01:intron 35.0%
! TTAATGAAATGTCGGCTAGT+CGG - Chr7:54096682-54096701 None:intergenic 35.0%
! TTTATTCTTCTGAGGGTTAG+TGG + Chr7:54096931-54096950 MsG0780038853.01.T01:three_prime_UTR 35.0%
! TTTTACTGATCTCATCACTG+TGG + Chr7:54092032-54092051 MsG0780038853.01.T01:CDS 35.0%
!! CAGGTAAGTTTACTGCTTTT+CGG + Chr7:54093329-54093348 MsG0780038853.01.T01:intron 35.0%
!! GAGCTATCTGATTTTGTTTC+GGG + Chr7:54092158-54092177 MsG0780038853.01.T01:intron 35.0%
!! GGAGCTATCTGATTTTGTTT+CGG + Chr7:54092157-54092176 MsG0780038853.01.T01:intron 35.0%
!! TCAAAAGTATCCAGCAGTTT+AGG - Chr7:54096018-54096037 None:intergenic 35.0%
!! TCTGTTTTCTGAAGGGTTTA+GGG - Chr7:54095808-54095827 None:intergenic 35.0%
!! TGACATTTAACAGTGTTGGT+AGG + Chr7:54095691-54095710 MsG0780038853.01.T01:intron 35.0%
!! TGTATTGATTAGGAGCAGTT+AGG + Chr7:54093561-54093580 MsG0780038853.01.T01:intron 35.0%
!! TTCTGTTTTCTGAAGGGTTT+AGG - Chr7:54095809-54095828 None:intergenic 35.0%
AAAGCCCAAACACTAGTAGT+GGG + Chr7:54092219-54092238 MsG0780038853.01.T01:CDS 40.0%
AAAGTTACCTCTGTAGCAGT+TGG + Chr7:54092392-54092411 MsG0780038853.01.T01:CDS 40.0%
AACAAATTGCTGCTGGACTT+TGG + Chr7:54095324-54095343 MsG0780038853.01.T01:CDS 40.0%
AACGATATTCTAGGTCGAGT+TGG + Chr7:54092679-54092698 MsG0780038853.01.T01:intron 40.0%
AAGAAAGTTGTAGAGGAAGC+TGG + Chr7:54092263-54092282 MsG0780038853.01.T01:CDS 40.0%
ACATGAGAAGGGTTTCAGTT+TGG + Chr7:54096825-54096844 MsG0780038853.01.T01:three_prime_UTR 40.0%
ACATGGGGATGGAACAAATA+TGG + Chr7:54096416-54096435 MsG0780038853.01.T01:CDS 40.0%
AGAGTGAAACAAATTGCTGC+TGG + Chr7:54095317-54095336 MsG0780038853.01.T01:CDS 40.0%
AGGAGAAGAGACATGAACTT+GGG - Chr7:54094689-54094708 None:intergenic 40.0%
ATTCCTATCACTGATGCAGA+GGG - Chr7:54095785-54095804 None:intergenic 40.0%
ATTGTAGCTTGGGACTAACT+TGG + Chr7:54096792-54096811 MsG0780038853.01.T01:three_prime_UTR 40.0%
ATTTATACGGACGCAAACAC+AGG + Chr7:54094039-54094058 MsG0780038853.01.T01:intron 40.0%
CAACCACAAGCAACATTTCT+TGG - Chr7:54096591-54096610 None:intergenic 40.0%
CACAAGCAACATTTCTTGGT+CGG - Chr7:54096587-54096606 None:intergenic 40.0%
CAGTTTAGGTGAAGTCTGAA+AGG - Chr7:54096004-54096023 None:intergenic 40.0%
CCTTCTCGAGTTTCTATTTC+CGG + Chr7:54096558-54096577 MsG0780038853.01.T01:CDS 40.0%
CTGACATTGTGTTAGGTATC+GGG + Chr7:54093448-54093467 MsG0780038853.01.T01:intron 40.0%
CTTTCGAGCATAGTTTCTTG+TGG + Chr7:54096045-54096064 MsG0780038853.01.T01:CDS 40.0%
GAAAATGGGTCAGTTATTCC+GGG - Chr7:54094220-54094239 None:intergenic 40.0%
GAAGATCTCATTTGCCAAAC+AGG + Chr7:54092295-54092314 MsG0780038853.01.T01:CDS 40.0%
GAGATCTGAGAACATGAGAA+GGG + Chr7:54096814-54096833 MsG0780038853.01.T01:three_prime_UTR 40.0%
GAGTCTGATAGTCAAACATC+TGG + Chr7:54092317-54092336 MsG0780038853.01.T01:CDS 40.0%
GCTTCGGTTAAAACTGCATT+GGG - Chr7:54094078-54094097 None:intergenic 40.0%
GGAAGAATCTTTCTGCTGTT+TGG + Chr7:54097016-54097035 MsG0780038853.01.T01:three_prime_UTR 40.0%
GGGAATCAGTTTGGACAATT+GGG + Chr7:54095392-54095411 MsG0780038853.01.T01:CDS 40.0%
GGTAAAGTCATTTCCCAAGT+AGG - Chr7:54094579-54094598 None:intergenic 40.0%
GTGAAGTACGAAGATTTGGA+AGG + Chr7:54092741-54092760 MsG0780038853.01.T01:intron 40.0%
TAAAACCAACAAGTGAGGTC+AGG - Chr7:54095114-54095133 None:intergenic 40.0%
TATAACGCGCTATTGCATAG+CGG - Chr7:54092594-54092613 None:intergenic 40.0%
TGCTTCGGTTAAAACTGCAT+TGG - Chr7:54094079-54094098 None:intergenic 40.0%
TGGGAATCAGTTTGGACAAT+TGG + Chr7:54095391-54095410 MsG0780038853.01.T01:CDS 40.0%
TGTAGCTGGAAGTTATGTGA+CGG + Chr7:54092984-54093003 MsG0780038853.01.T01:CDS 40.0%
TGTCAATTAAATTGGGACGG+AGG + Chr7:54094412-54094431 MsG0780038853.01.T01:intron 40.0%
TGTCCCACATCTGAAAACTT+CGG - Chr7:54092808-54092827 None:intergenic 40.0%
TTCGAGCATAGTTTCTTGTG+GGG + Chr7:54096047-54096066 MsG0780038853.01.T01:CDS 40.0%
TTGACTATCAGACTCCTGTT+TGG - Chr7:54092312-54092331 None:intergenic 40.0%
TTGCAGGAGCTGTCATATTT+GGG - Chr7:54094719-54094738 None:intergenic 40.0%
! ATGATGGTCACCTTTTCACA+TGG + Chr7:54096399-54096418 MsG0780038853.01.T01:CDS 40.0%
! ATTTTCTTCCAGTGTGGACA+AGG + Chr7:54095242-54095261 MsG0780038853.01.T01:intron 40.0%
! CAAGAAATGTTGCTTGTGGT+TGG + Chr7:54096589-54096608 MsG0780038853.01.T01:CDS 40.0%
! CTTGTTGTCATGATGAGAGT+CGG - Chr7:54092246-54092265 None:intergenic 40.0%
! GACGAAATTTTCTTCCAGTG+TGG + Chr7:54095236-54095255 MsG0780038853.01.T01:intron 40.0%
! GTCAACTTTACGCTTTTGGT+GGG + Chr7:54095372-54095391 MsG0780038853.01.T01:CDS 40.0%
! TATGTGACGGAAATAGCATG+CGG + Chr7:54092997-54093016 MsG0780038853.01.T01:CDS 40.0%
! TATTGATTAGGAGCAGTTGC+AGG + Chr7:54093603-54093622 MsG0780038853.01.T01:intron 40.0%
! TGATGGTCACCTTTTCACAT+GGG + Chr7:54096400-54096419 MsG0780038853.01.T01:CDS 40.0%
! TTTTCTTCCAGTGTGGACAA+GGG + Chr7:54095243-54095262 MsG0780038853.01.T01:intron 40.0%
!! AGGTACTGTTTTCAGATTGG+TGG + Chr7:54094994-54095013 MsG0780038853.01.T01:intron 40.0%
!! AGTGTTGGTAGGAGATACTA+TGG + Chr7:54095702-54095721 MsG0780038853.01.T01:intron 40.0%
AACATTTCTTGGTCGGCAAC+CGG - Chr7:54096580-54096599 None:intergenic 45.0%
AAGTACACGTGATCTCTCCT+TGG + Chr7:54095055-54095074 MsG0780038853.01.T01:intron 45.0%
ACGTGTACTTCCGACACATT+GGG - Chr7:54095045-54095064 None:intergenic 45.0%
AGAGAGATGTGTCTTCTCTG+AGG + Chr7:54093712-54093731 MsG0780038853.01.T01:intron 45.0%
AGTTCATGTCTCTTCTCCTG+TGG + Chr7:54094690-54094709 MsG0780038853.01.T01:intron 45.0%
ATATATTACTCCCTCCGTCC+CGG + Chr7:54094199-54094218 MsG0780038853.01.T01:intron 45.0%
CAAAGCCCAAACACTAGTAG+TGG + Chr7:54092218-54092237 MsG0780038853.01.T01:CDS 45.0%
CAATCCGCAATTGACAACAC+TGG - Chr7:54092450-54092469 None:intergenic 45.0%
CAGGAGAAGAGACATGAACT+TGG - Chr7:54094690-54094709 None:intergenic 45.0%
CAGTTTGGACAATTGGGTAC+TGG + Chr7:54095398-54095417 MsG0780038853.01.T01:CDS 45.0%
CATTATTCCCTTGTCCACAC+TGG - Chr7:54095253-54095272 None:intergenic 45.0%
CCGGAAATAGAAACTCGAGA+AGG - Chr7:54096561-54096580 None:intergenic 45.0%
CGTCATAGTGCTTTGCTAAC+AGG + Chr7:54096072-54096091 MsG0780038853.01.T01:CDS 45.0%
CGTGATCTCTCCTTGGAATA+TGG + Chr7:54095062-54095081 MsG0780038853.01.T01:intron 45.0%
CTACTAGTGTTTGGGCTTTG+CGG - Chr7:54092218-54092237 None:intergenic 45.0%
CTTCAGGTAACGAGAATACC+TGG - Chr7:54096442-54096461 None:intergenic 45.0%
CTTGCAGGAGCTGTCATATT+TGG - Chr7:54094720-54094739 None:intergenic 45.0%
GAAACCTTCTTGATGCTAGC+GGG - Chr7:54096660-54096679 None:intergenic 45.0%
GATTCCTATCACTGATGCAG+AGG - Chr7:54095786-54095805 None:intergenic 45.0%
GGAAACCTTCTTGATGCTAG+CGG - Chr7:54096661-54096680 None:intergenic 45.0%
GGAGATCTGAGAACATGAGA+AGG + Chr7:54096813-54096832 MsG0780038853.01.T01:three_prime_UTR 45.0%
GGCTGGGAAACAAAGTTCAT+CGG + Chr7:54092074-54092093 MsG0780038853.01.T01:CDS 45.0%
GTGATGTGTATTTATGGGGC+TGG + Chr7:54091983-54092002 MsG0780038853.01.T01:CDS 45.0%
TACAAACCACTCAAGCCTCT+TGG - Chr7:54094155-54094174 None:intergenic 45.0%
TACTAGTGTTTGGGCTTTGC+GGG - Chr7:54092217-54092236 None:intergenic 45.0%
TCAGACTTCACCTAAACTGC+TGG + Chr7:54096005-54096024 MsG0780038853.01.T01:intron 45.0%
TCTGTTTGTCTCCTCCTGTT+GGG + Chr7:54094112-54094131 MsG0780038853.01.T01:intron 45.0%
TGAGGACTCAGGTGATGAAT+AGG - Chr7:54094600-54094619 None:intergenic 45.0%
TGCAGGAGCTGTCATATTTG+GGG - Chr7:54094718-54094737 None:intergenic 45.0%
TGGAAAGAATGTGTGCCTTC+TGG + Chr7:54092003-54092022 MsG0780038853.01.T01:CDS 45.0%
TGGTACATGGAGATTCTTGC+AGG - Chr7:54094735-54094754 None:intergenic 45.0%
TGTCATATTTGGGGATCCAC+AGG - Chr7:54094709-54094728 None:intergenic 45.0%
TGTTCCATCCCCATGTGAAA+AGG - Chr7:54096412-54096431 None:intergenic 45.0%
TTACCTCTGTAGCAGTTGGT+GGG + Chr7:54092396-54092415 MsG0780038853.01.T01:CDS 45.0%
TTCCTCCTTTACAAGGCCTT+GGG - Chr7:54093856-54093875 None:intergenic 45.0%
TTCTGTTTGTCTCCTCCTGT+TGG + Chr7:54094111-54094130 MsG0780038853.01.T01:intron 45.0%
! ACTGGGGCTCTTCTTACTTT+TGG + Chr7:54093290-54093309 MsG0780038853.01.T01:CDS 45.0%
! AGAGGCTTGAGTGGTTTGTA+AGG + Chr7:54094155-54094174 MsG0780038853.01.T01:intron 45.0%
! CGACCAAGAAATGTTGCTTG+TGG + Chr7:54096585-54096604 MsG0780038853.01.T01:CDS 45.0%
! GAAATGTTGCTTGTGGTTGG+TGG + Chr7:54096592-54096611 MsG0780038853.01.T01:CDS 45.0%
! GAAGTTTTCAGATGTGGGAC+AGG + Chr7:54092807-54092826 MsG0780038853.01.T01:intron 45.0%
! GATGGTCACCTTTTCACATG+GGG + Chr7:54096401-54096420 MsG0780038853.01.T01:CDS 45.0%
! GCTTTTGGTGGGAATCAGTT+TGG + Chr7:54095383-54095402 MsG0780038853.01.T01:CDS 45.0%
! GGTATCGGGTAGTATCCATA+GGG + Chr7:54093462-54093481 MsG0780038853.01.T01:intron 45.0%
! GGTCAACTTTACGCTTTTGG+TGG + Chr7:54095371-54095390 MsG0780038853.01.T01:CDS 45.0%
! GTGGATTGTGATCCCAGATT+AGG + Chr7:54094536-54094555 MsG0780038853.01.T01:intron 45.0%
! GTGTTGTCAATTGCGGATTG+CGG + Chr7:54092450-54092469 MsG0780038853.01.T01:CDS 45.0%
! TTGCGGATTGCGGAAAATAG+TGG + Chr7:54092460-54092479 MsG0780038853.01.T01:CDS 45.0%
! TTGGTGGCATACACTGTTGA+TGG + Chr7:54096608-54096627 MsG0780038853.01.T01:CDS 45.0%
! TTTGGGTTCTCGAGTCAAGA+TGG + Chr7:54092867-54092886 MsG0780038853.01.T01:CDS 45.0%
!! AGGTATCGGGTAGTATCCAT+AGG + Chr7:54093461-54093480 MsG0780038853.01.T01:intron 45.0%
!! GCTCTTCTTACTTTTGGCTG+GGG + Chr7:54093296-54093315 MsG0780038853.01.T01:CDS 45.0%
!! GGCTCTTCTTACTTTTGGCT+GGG + Chr7:54093295-54093314 MsG0780038853.01.T01:CDS 45.0%
!!! CTTTTGCTCTGGGATTACAG+AGG + Chr7:54093737-54093756 MsG0780038853.01.T01:intron 45.0%
!!! ATTTTAATATATAGTTATTT+AGG + Chr7:54093506-54093525 MsG0780038853.01.T01:intron 5.0%
AACTTTCACCCCATGGCCAA+GGG - Chr7:54092378-54092397 None:intergenic 50.0%
ACAGATAGGGGACAAAGAGC+AGG - Chr7:54094659-54094678 None:intergenic 50.0%
ACTGCTGTGTGTGCAGAAGA+TGG + Chr7:54091961-54091980 MsG0780038853.01.T01:CDS 50.0%
AGCCTCTTGGTCTAGCATTG+AGG - Chr7:54094142-54094161 None:intergenic 50.0%
AGTCCCTCTGCATCAGTGAT+AGG + Chr7:54095779-54095798 MsG0780038853.01.T01:intron 50.0%
AGTTCATCGGTAGCTGAGCA+AGG + Chr7:54092087-54092106 MsG0780038853.01.T01:CDS 50.0%
ATGGGTCAGTTATTCCGGGA+CGG - Chr7:54094216-54094235 None:intergenic 50.0%
CAACAAGTGAGGTCAGGAAG+AGG - Chr7:54095108-54095127 None:intergenic 50.0%
CACGTGTACTTCCGACACAT+TGG - Chr7:54095046-54095065 None:intergenic 50.0%
CAGAGGTAACTTTCACCCCA+TGG - Chr7:54092385-54092404 None:intergenic 50.0%
CATGTGTCGAGTCTGCTTCT+GGG + Chr7:54092911-54092930 MsG0780038853.01.T01:CDS 50.0%
CGGACCCACTACTAGTGTTT+GGG - Chr7:54092226-54092245 None:intergenic 50.0%
CTCTTCCTGACCTCACTTGT+TGG + Chr7:54095106-54095125 MsG0780038853.01.T01:intron 50.0%
CTCTTGTTACCCTTGGCCAT+GGG + Chr7:54092366-54092385 MsG0780038853.01.T01:CDS 50.0%
CTTCCTCCTTTACAAGGCCT+TGG - Chr7:54093857-54093876 None:intergenic 50.0%
GCCAAGGGTAACAAGAGAAG+GGG - Chr7:54092363-54092382 None:intergenic 50.0%
GCTAGCACCACAAACATAGC+TGG - Chr7:54094792-54094811 None:intergenic 50.0%
GCTATAGCACTGTCACGTAG+CGG - Chr7:54092497-54092516 None:intergenic 50.0%
GGATTTACCTGACAGTGCCA+AGG - Chr7:54092429-54092448 None:intergenic 50.0%
GGCCAAGGGTAACAAGAGAA+GGG - Chr7:54092364-54092383 None:intergenic 50.0%
GGGATGGAACAAATATGGCC+AGG + Chr7:54096421-54096440 MsG0780038853.01.T01:CDS 50.0%
GTTACCTCTGTAGCAGTTGG+TGG + Chr7:54092395-54092414 MsG0780038853.01.T01:CDS 50.0%
TAACTTTCACCCCATGGCCA+AGG - Chr7:54092379-54092398 None:intergenic 50.0%
TAGAGGAAGCTGGAAAGCGA+AGG + Chr7:54092273-54092292 MsG0780038853.01.T01:CDS 50.0%
TCATGTGTCGAGTCTGCTTC+TGG + Chr7:54092910-54092929 MsG0780038853.01.T01:CDS 50.0%
TCCCCTTCTCTTGTTACCCT+TGG + Chr7:54092359-54092378 MsG0780038853.01.T01:CDS 50.0%
TCGGACCCACTACTAGTGTT+TGG - Chr7:54092227-54092246 None:intergenic 50.0%
TCTCTTGTTACCCTTGGCCA+TGG + Chr7:54092365-54092384 MsG0780038853.01.T01:CDS 50.0%
TCTTGTTACCCTTGGCCATG+GGG + Chr7:54092367-54092386 MsG0780038853.01.T01:CDS 50.0%
TGCCTCAATGCTAGACCAAG+AGG + Chr7:54094137-54094156 MsG0780038853.01.T01:intron 50.0%
TGGCACACTTCCAACTTGTG+TGG + Chr7:54095014-54095033 MsG0780038853.01.T01:intron 50.0%
TGGCCAAGGGTAACAAGAGA+AGG - Chr7:54092365-54092384 None:intergenic 50.0%
TGTGGCAATGCCCAATGTGT+CGG + Chr7:54095032-54095051 MsG0780038853.01.T01:intron 50.0%
TTCACCCGCTAGCATCAAGA+AGG + Chr7:54096653-54096672 MsG0780038853.01.T01:three_prime_UTR 50.0%
TTCAGATGTGGGACAGGTCT+GGG + Chr7:54092813-54092832 MsG0780038853.01.T01:CDS 50.0%
TTTCAGATGTGGGACAGGTC+TGG + Chr7:54092812-54092831 MsG0780038853.01.T01:CDS 50.0%
! GTCACCTTTTCACATGGGGA+TGG + Chr7:54096405-54096424 MsG0780038853.01.T01:CDS 50.0%
! GTGTTCCCAAGGCCTTGTAA+AGG + Chr7:54093848-54093867 MsG0780038853.01.T01:intron 50.0%
! GTTTCCCAGCCACATCCTTT+TGG - Chr7:54092065-54092084 None:intergenic 50.0%
! TTCCCAAGGCCTTGTAAAGG+AGG + Chr7:54093851-54093870 MsG0780038853.01.T01:intron 50.0%
! TTGGGCATTGCCACACAAGT+TGG - Chr7:54095027-54095046 None:intergenic 50.0%
!! CTCTGAGGAGCTTTTGCTCT+GGG + Chr7:54093727-54093746 MsG0780038853.01.T01:intron 50.0%
!! GGGCTCTTCTTACTTTTGGC+TGG + Chr7:54093294-54093313 MsG0780038853.01.T01:CDS 50.0%
!! GTCGAGTTGGATCTTCCTTG+TGG + Chr7:54092692-54092711 MsG0780038853.01.T01:intron 50.0%
!! TCTCTGAGGAGCTTTTGCTC+TGG + Chr7:54093726-54093745 MsG0780038853.01.T01:intron 50.0%
ACCTGAGTCCTCAGTCGACA+GGG + Chr7:54094607-54094626 MsG0780038853.01.T01:intron 55.0%
AGCCTCCAAAAGGATGTGGC+TGG + Chr7:54092057-54092076 MsG0780038853.01.T01:CDS 55.0%
AGGCATACCTTGGCACTGTC+AGG + Chr7:54092419-54092438 MsG0780038853.01.T01:CDS 55.0%
AGGCGAAGGACAGCTAGGTT+TGG + Chr7:54092849-54092868 MsG0780038853.01.T01:CDS 55.0%
AGGGTAACTGCTGACGCAGT+TGG + Chr7:54093481-54093500 MsG0780038853.01.T01:intron 55.0%
CACTGTGGGAAGCCTCCAAA+AGG + Chr7:54092047-54092066 MsG0780038853.01.T01:CDS 55.0%
CGGAAATAGCATGCGGAGGT+CGG + Chr7:54093004-54093023 MsG0780038853.01.T01:CDS 55.0%
CGGCACAGCGCTGTAATAAC+AGG + Chr7:54093024-54093043 MsG0780038853.01.T01:CDS 55.0%
CTACCTGGGCAGCTTGGTTT+GGG + Chr7:54096513-54096532 MsG0780038853.01.T01:intron 55.0%
CTGCGTCAGCAGTTACCCTA+TGG - Chr7:54093480-54093499 None:intergenic 55.0%
GATTGTCTACCTGGGCAGCT+TGG + Chr7:54096507-54096526 MsG0780038853.01.T01:intron 55.0%
GCCTCCAAAAGGATGTGGCT+GGG + Chr7:54092058-54092077 MsG0780038853.01.T01:CDS 55.0%
GCGGGTGAATTGCGTCAAAC+AGG - Chr7:54096642-54096661 None:intergenic 55.0%
GCTAGACCAAGAGGCTTGAG+TGG + Chr7:54094146-54094165 MsG0780038853.01.T01:intron 55.0%
GGCGAAGGACAGCTAGGTTT+GGG + Chr7:54092850-54092869 MsG0780038853.01.T01:CDS 55.0%
GGGAAGCCTCCAAAAGGATG+TGG + Chr7:54092053-54092072 MsG0780038853.01.T01:CDS 55.0%
GTCAGTTATTCCGGGACGGA+GGG - Chr7:54094212-54094231 None:intergenic 55.0%
TATGGAGGCGAAGGACAGCT+AGG + Chr7:54092844-54092863 MsG0780038853.01.T01:CDS 55.0%
TCAGATGTGGGACAGGTCTG+GGG + Chr7:54092814-54092833 MsG0780038853.01.T01:CDS 55.0%
TCTACCTGGGCAGCTTGGTT+TGG + Chr7:54096512-54096531 MsG0780038853.01.T01:intron 55.0%
! AGCATTGAGGCACTCCCAAC+AGG - Chr7:54094129-54094148 None:intergenic 55.0%
! ATTGAGGCACTCCCAACAGG+AGG - Chr7:54094126-54094145 None:intergenic 55.0%
! GTGACGGAAATAGCATGCGG+AGG + Chr7:54093000-54093019 MsG0780038853.01.T01:CDS 55.0%
! TCCCAGCCACATCCTTTTGG+AGG - Chr7:54092062-54092081 None:intergenic 55.0%
! TGTCGAGTCTGCTTCTGGGA+AGG + Chr7:54092915-54092934 MsG0780038853.01.T01:CDS 55.0%
!! ACTTTTGGCTGGGGTCTGCA+TGG + Chr7:54093305-54093324 MsG0780038853.01.T01:CDS 55.0%
!! AGTTGGTGGGAGGCATACCT+TGG + Chr7:54092409-54092428 MsG0780038853.01.T01:CDS 55.0%
CACCTGAGTCCTCAGTCGAC+AGG + Chr7:54094606-54094625 MsG0780038853.01.T01:intron 60.0%
CCTCCCACCAACTGCTACAG+AGG - Chr7:54092402-54092421 None:intergenic 60.0%
GGTCAGTTATTCCGGGACGG+AGG - Chr7:54094213-54094232 None:intergenic 60.0%
TCAGTCGACAGGGTGGAGGT+GGG + Chr7:54094617-54094636 MsG0780038853.01.T01:intron 60.0%
TCTCCCAAACCAAGCTGCCC+AGG - Chr7:54096519-54096538 None:intergenic 60.0%
TGAGTCCTCAGTCGACAGGG+TGG + Chr7:54094610-54094629 MsG0780038853.01.T01:intron 60.0%
! ACCCTGTCGACTGAGGACTC+AGG - Chr7:54094611-54094630 None:intergenic 60.0%
! ATGTGGGACAGGTCTGGGGT+TGG + Chr7:54092818-54092837 MsG0780038853.01.T01:CDS 60.0%
! TGTGGGACAGGTCTGGGGTT+GGG + Chr7:54092819-54092838 MsG0780038853.01.T01:CDS 60.0%
!! CCTCTGTAGCAGTTGGTGGG+AGG + Chr7:54092399-54092418 MsG0780038853.01.T01:CDS 60.0%
ACAGGGTGGAGGTGGGGACT+AGG + Chr7:54094624-54094643 MsG0780038853.01.T01:intron 65.0%
CAGGGTGGAGGTGGGGACTA+GGG + Chr7:54094625-54094644 MsG0780038853.01.T01:intron 65.0%
CAGTCGACAGGGTGGAGGTG+GGG + Chr7:54094618-54094637 MsG0780038853.01.T01:intron 65.0%
CTCAGTCGACAGGGTGGAGG+TGG + Chr7:54094616-54094635 MsG0780038853.01.T01:intron 65.0%
GGTTGGGGCTATGGAGGCGA+AGG + Chr7:54092835-54092854 MsG0780038853.01.T01:CDS 65.0%
GTCCTCAGTCGACAGGGTGG+AGG + Chr7:54094613-54094632 MsG0780038853.01.T01:intron 65.0%
TGGCTGGGGTCTGCATGGAC+AGG + Chr7:54093310-54093329 MsG0780038853.01.T01:CDS 65.0%
! CACCTCCACCCTGTCGACTG+AGG - Chr7:54094618-54094637 None:intergenic 65.0%
! CAGGTCTGGGGTTGGGGCTA+TGG + Chr7:54092826-54092845 MsG0780038853.01.T01:CDS 65.0%
! GTCTGGGGTTGGGGCTATGG+AGG + Chr7:54092829-54092848 MsG0780038853.01.T01:CDS 65.0%
! GTGGGACAGGTCTGGGGTTG+GGG + Chr7:54092820-54092839 MsG0780038853.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 54091952 54097038 54091952 ID=MsG0780038853.01;Name=MsG0780038853.01
Chr7 mRNA 54091952 54097038 54091952 ID=MsG0780038853.01.T01;Parent=MsG0780038853.01;Name=MsG0780038853.01.T01;_AED=0.41;_eAED=0.42;_QI=0|0.71|0.5|1|0.71|0.87|8|391|396
Chr7 exon 54091952 54092108 54091952 ID=MsG0780038853.01.T01:exon:15179;Parent=MsG0780038853.01.T01
Chr7 exon 54092210 54092481 54092210 ID=MsG0780038853.01.T01:exon:15180;Parent=MsG0780038853.01.T01
Chr7 exon 54092811 54093045 54092811 ID=MsG0780038853.01.T01:exon:15181;Parent=MsG0780038853.01.T01
Chr7 exon 54093288 54093331 54093288 ID=MsG0780038853.01.T01:exon:15182;Parent=MsG0780038853.01.T01
Chr7 exon 54095254 54095436 54095254 ID=MsG0780038853.01.T01:exon:15183;Parent=MsG0780038853.01.T01
Chr7 exon 54096009 54096093 54096009 ID=MsG0780038853.01.T01:exon:15184;Parent=MsG0780038853.01.T01
Chr7 exon 54096351 54096442 54096351 ID=MsG0780038853.01.T01:exon:15185;Parent=MsG0780038853.01.T01
Chr7 exon 54096525 54097038 54096525 ID=MsG0780038853.01.T01:exon:15186;Parent=MsG0780038853.01.T01
Chr7 CDS 54091952 54092108 54091952 ID=MsG0780038853.01.T01:cds;Parent=MsG0780038853.01.T01
Chr7 CDS 54092210 54092481 54092210 ID=MsG0780038853.01.T01:cds;Parent=MsG0780038853.01.T01
Chr7 CDS 54092811 54093045 54092811 ID=MsG0780038853.01.T01:cds;Parent=MsG0780038853.01.T01
Chr7 CDS 54093288 54093331 54093288 ID=MsG0780038853.01.T01:cds;Parent=MsG0780038853.01.T01
Chr7 CDS 54095254 54095436 54095254 ID=MsG0780038853.01.T01:cds;Parent=MsG0780038853.01.T01
Chr7 CDS 54096009 54096093 54096009 ID=MsG0780038853.01.T01:cds;Parent=MsG0780038853.01.T01
Chr7 CDS 54096351 54096442 54096351 ID=MsG0780038853.01.T01:cds;Parent=MsG0780038853.01.T01
Chr7 CDS 54096525 54096647 54096525 ID=MsG0780038853.01.T01:cds;Parent=MsG0780038853.01.T01
Chr7 three_prime_UTR 54096648 54097038 54096648 ID=MsG0780038853.01.T01:three_prime_utr;Parent=MsG0780038853.01.T01
Gene Sequence

>MsG0780038853.01.T01

ATGGAATTAACTGCTGTGTGTGCAGAAGATGGTGATGTGTATTTATGGGGCTGGAAAGAATGTGTGCCTTCTGGAAAAGTTTTTACTGATCTCATCACTGTGGGAAGCCTCCAAAAGGATGTGGCTGGGAAACAAAGTTCATCGGTAGCTGAGCAAGGAAGCCCGCAAAGCCCAAACACTAGTAGTGGGTCCGACTCTCATCATGACAACAAGAAAGTTGTAGAGGAAGCTGGAAAGCGAAGGAAGATCTCATTTGCCAAACAGGAGTCTGATAGTCAAACATCTGGAGATGAATTATTTATTGTGTCCCCTTCTCTTGTTACCCTTGGCCATGGGGTGAAAGTTACCTCTGTAGCAGTTGGTGGGAGGCATACCTTGGCACTGTCAGGTAAATCCAGTGTTGTCAATTGCGGATTGCGGAAAATAGTGTTTTCAGATGTGGGACAGGTCTGGGGTTGGGGCTATGGAGGCGAAGGACAGCTAGGTTTGGGTTCTCGAGTCAAGATGGTATCATCCCCTCATCTTATTTCATGTGTCGAGTCTGCTTCTGGGAAGGATAAGTCATCTTTTCAGCAAGGAAGCAATTCTCTTCAATGTTCTAATGTAGCTGGAAGTTATGTGACGGAAATAGCATGCGGAGGTCGGCACAGCGCTGTAATAACAGATACTGGGGCTCTTCTTACTTTTGGCTGGGGTCTGCATGGACAGTGTGGACAAGGGAATAATGCTGATCAGCTAAGACCAACTCTAGTTTCTTCTTTATTGGGAACTAGAGTGAAACAAATTGCTGCTGGACTTTGGCATACATTGTGTGTTACTGTAAATGGTCAACTTTACGCTTTTGGTGGGAATCAGTTTGGACAATTGGGTACTGGTAATGATCAAACTGAGACTTCACCTAAACTGCTGGATACTTTTGAGAACAATCTTTCGAGCATAGTTTCTTGTGGGGCTCGTCATAGTGCTTTGCTAACAGTTTCTCACTATATTCCTGCTATAATGCTTACGCATTTTCATATTGAAGATGATGGTCACCTTTTCACATGGGGATGGAACAAATATGGCCAGCTTGGTTTGGGAGATTCTGTTGACAGAAACATTCCTTCTCGAGTTTCTATTTCCGGTTGCCGACCAAGAAATGTTGCTTGTGGTTGGTGGCATACACTGTTGATGGCTGATAAGCCTGTTTGA
Protein sequence

>MsG0780038853.01.T01

MELTAVCAEDGDVYLWGWKECVPSGKVFTDLITVGSLQKDVAGKQSSSVAEQGSPQSPNTSSGSDSHHDNKKVVEEAGKRRKISFAKQESDSQTSGDELFIVSPSLVTLGHGVKVTSVAVGGRHTLALSGKSSVVNCGLRKIVFSDVGQVWGWGYGGEGQLGLGSRVKMVSSPHLISCVESASGKDKSSFQQGSNSLQCSNVAGSYVTEIACGGRHSAVITDTGALLTFGWGLHGQCGQGNNADQLRPTLVSSLLGTRVKQIAAGLWHTLCVTVNGQLYAFGGNQFGQLGTGNDQTETSPKLLDTFENNLSSIVSCGARHSALLTVSHYIPAIMLTHFHIEDDGHLFTWGWNKYGQLGLGDSVDRNIPSRVSISGCRPRNVACGWWHTLLMADKPV*