AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780039944.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039944.01.T01 MTR_7g081735 89.272 261 5 2 1 246 1 253 1.92e-167 462
MsG0780039944.01.T01 MTR_7g081735 90.625 224 6 1 1 209 1 224 2.71e-145 406
MsG0780039944.01.T01 MTR_7g081735 91.031 223 5 1 1 208 1 223 2.84e-145 406
MsG0780039944.01.T01 MTR_7g081735 91.071 224 5 1 1 209 1 224 6.93e-145 405
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039944.01.T01 AT1G02090 67.816 261 61 3 1 246 1 253 1.76e-124 354
MsG0780039944.01.T01 AT1G02090 71.946 221 46 2 1 206 1 220 3.67e-112 322
MsG0780039944.01.T01 AT1G02090 71.946 221 46 2 1 206 1 220 9.60e-112 321

Find 68 sgRNAs with CRISPR-Local

Find 464 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAGAAAATTGGTTCGATTT+AGG 0.150102 7:-70902221 None:intergenic
CGCTCTCCCCAATGTTCTTC+AGG 0.215091 7:+70902417 MsG0780039944.01.T01:CDS
GCCTGTTTGCACATGGAATA+TGG 0.229485 7:+70902929 MsG0780039944.01.T01:CDS
GAGAAAATTGGTTCGATTTA+GGG 0.244579 7:-70902220 None:intergenic
TCGAGAATGATCAAGGAATT+AGG 0.245591 7:-70902252 None:intergenic
CAATTCAAGACAAGATAAAA+TGG 0.274906 7:+70907553 MsG0780039944.01.T01:CDS
AGTCCCTACCTGCTGCAAAT+TGG 0.331342 7:-70907103 None:intergenic
CGAGAATGATCAAGGAATTA+GGG 0.354023 7:-70902251 None:intergenic
GAGGAGATCTGCGCTGAATC+TGG 0.390426 7:+70908440 MsG0780039944.01.T01:CDS
CCTTCTCTTCTACCTCCTTC+CGG 0.397288 7:-70907608 None:intergenic
CTCCTGCATCAATTGGTCAT+AGG 0.398251 7:-70904661 None:intergenic
TGCTGATCGCCTTCCACAAT+TGG 0.401479 7:+70904235 MsG0780039944.01.T01:CDS
TCCATATTCCATGTGCAAAC+AGG 0.434794 7:-70902930 None:intergenic
GACTTGAGGCCTGGTCAACT+TGG 0.435726 7:+70907122 MsG0780039944.01.T01:CDS
CATCTAGCTCCTGCATCAAT+TGG 0.441053 7:-70904668 None:intergenic
ACTGATAGGAAATACCTTGT+AGG 0.465600 7:-70904312 None:intergenic
CGCTGAATCTGGTGGAGTGA+TGG 0.471741 7:+70908451 MsG0780039944.01.T01:CDS
TCCTGCATCAATTGGTCATA+GGG 0.479189 7:-70904660 None:intergenic
AATTCAAGACAAGATAAAAT+GGG 0.481752 7:+70907554 MsG0780039944.01.T01:CDS
TTTGAGTAGTGTGAGAGGAG+AGG 0.488386 7:-70902127 None:intergenic
CAGAGAAAGCGAAGAGCAAA+GGG 0.492940 7:-70902387 None:intergenic
GGAAGAGATGGCTGAAGCAT+TGG 0.495343 7:-70902341 None:intergenic
CGCAGATCTCCTCATGCCCT+CGG 0.498832 7:-70908430 None:intergenic
CGATTTAGGGGAAAATTGAA+AGG 0.502034 7:-70902207 None:intergenic
AGAAAATTGGTTCGATTTAG+GGG 0.509558 7:-70902219 None:intergenic
GGTCCAATTTGCAGCAGGTA+GGG 0.514905 7:+70907100 MsG0780039944.01.T01:intron
CTGTAAGTTGCTTAAGCTTG+AGG 0.515959 7:-70904271 None:intergenic
AATCCAACCGACCTTGAAGA+TGG 0.517129 7:-70907649 None:intergenic
ATCATGTTCCCAAGTTGACC+AGG 0.520527 7:-70907131 None:intergenic
GCAGGTAGGGACTTGAGGCC+TGG 0.520956 7:+70907113 MsG0780039944.01.T01:CDS
TTAAGCTTGAGGATCTGATC+AGG 0.521602 7:-70904260 None:intergenic
TCTCAAATCACCTCTTTGGT+CGG 0.521918 7:-70908493 None:intergenic
TCAGAGAAAGCGAAGAGCAA+AGG 0.523965 7:-70902388 None:intergenic
TTGTCTCTGTTCAATGTCCA+TGG 0.528524 7:-70902275 None:intergenic
AGTGAAGAAGTCCATCTTCA+AGG 0.529066 7:+70907638 MsG0780039944.01.T01:CDS
ATCTGATCAGGTACCAATTG+TGG 0.530315 7:-70904248 None:intergenic
GATTTAGGGGAAAATTGAAA+GGG 0.535803 7:-70902206 None:intergenic
TTGCAGCAGGTAGGGACTTG+AGG 0.540523 7:+70907108 MsG0780039944.01.T01:CDS
TCCATGGTCGAGAATGATCA+AGG 0.542180 7:-70902259 None:intergenic
AGAAGTTACACACTGTAAGC+AGG 0.550706 7:+70908394 MsG0780039944.01.T01:intron
GGACATTGAACAGAGACAAT+CGG 0.551034 7:+70902279 MsG0780039944.01.T01:CDS
TTTCAGGTCCAATTTGCAGC+AGG 0.553602 7:+70907095 MsG0780039944.01.T01:intron
TCCTTGATCATTCTCGACCA+TGG 0.556843 7:+70902258 MsG0780039944.01.T01:exon
CCGGAAGGAGGTAGAAGAGA+AGG 0.558953 7:+70907608 MsG0780039944.01.T01:CDS
GAGAGGTTTGTGTCGAGTGA+TGG 0.564144 7:-70902110 None:intergenic
CAAACAGGCGAAGCATATCA+AGG 0.564528 7:-70902915 None:intergenic
ATGCTTCGCCTGTTTGCACA+TGG 0.570097 7:+70902922 MsG0780039944.01.T01:CDS
TGAAGCATTGGAAGCAGCAG+AGG 0.576714 7:-70902329 None:intergenic
ACCCTATGACCAATTGATGC+AGG 0.577127 7:+70904659 MsG0780039944.01.T01:CDS
CATCGACTTCCGAGGGCATG+AGG 0.581510 7:+70908421 MsG0780039944.01.T01:CDS
ACTTGAGGCCTGGTCAACTT+GGG 0.588224 7:+70907123 MsG0780039944.01.T01:CDS
ATCGACAATGACGGAAGAGA+TGG 0.590251 7:-70902353 None:intergenic
GACACTCGCTGAGACCTACA+AGG 0.594089 7:+70904298 MsG0780039944.01.T01:CDS
GAGATCTGCGCTGAATCTGG+TGG 0.603185 7:+70908443 MsG0780039944.01.T01:CDS
CAGGCCGACATCGACTTCCG+AGG 0.604650 7:+70908413 MsG0780039944.01.T01:CDS
AGGTCCAATTTGCAGCAGGT+AGG 0.608190 7:+70907099 MsG0780039944.01.T01:intron
GTGAAGTTGACAAGAAGCAC+CGG 0.618024 7:+70907589 MsG0780039944.01.T01:CDS
ATGCCCTCGGAAGTCGATGT+CGG 0.619533 7:-70908417 None:intergenic
TGACAAGAAGCACCGGAAGG+AGG 0.619732 7:+70907596 MsG0780039944.01.T01:CDS
AGAAGTAGCATCGACAATGA+CGG 0.621413 7:-70902362 None:intergenic
TGATACAGACACTCTCCGAC+TGG 0.626737 7:+70907150 MsG0780039944.01.T01:CDS
AGGCCGACATCGACTTCCGA+GGG 0.629042 7:+70908414 MsG0780039944.01.T01:CDS
AAGAAGTCCATCTTCAAGGT+CGG 0.641510 7:+70907642 MsG0780039944.01.T01:CDS
AAGATCGAAGCCGACCAAAG+AGG 0.643099 7:+70908483 MsG0780039944.01.T01:CDS
GATCAGGTACCAATTGTGGA+AGG 0.648153 7:-70904244 None:intergenic
AGTTGACAAGAAGCACCGGA+AGG 0.685488 7:+70907593 MsG0780039944.01.T01:CDS
GATTAATGAGTGCATGTATG+CGG 0.729577 7:+70904722 MsG0780039944.01.T01:CDS
GGGGAACCTGAAGAACATTG+GGG 0.769091 7:-70902423 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATCAAAAAATATATTCA+AGG - Chr7:70904474-70904493 None:intergenic 10.0%
!! AAATCAAAAAATATATTCAA+GGG - Chr7:70904473-70904492 None:intergenic 10.0%
!!! TATATTTTTTGATTTTGTAT+TGG + Chr7:70904478-70904497 MsG0780039944.01.T01:intron 10.0%
!! AAAAAAAAAAATCAGGAAAA+GGG - Chr7:70902447-70902466 None:intergenic 15.0%
!! TGTAAATGGAAATAATATAA+TGG + Chr7:70904178-70904197 MsG0780039944.01.T01:intron 15.0%
!! TTCATAGCTTAATAAATAAA+GGG - Chr7:70903769-70903788 None:intergenic 15.0%
!!! AATCTATCTTTTCTTAAATA+AGG + Chr7:70907174-70907193 MsG0780039944.01.T01:intron 15.0%
!!! ATATGCATTCAATTAATTTT+CGG - Chr7:70904790-70904809 None:intergenic 15.0%
!!! ATGTCCTTTTTTTTTTTTTT+TGG + Chr7:70908299-70908318 MsG0780039944.01.T01:intron 15.0%
!!! ATGTTTAGTTTTTTAATTCT+TGG + Chr7:70905004-70905023 MsG0780039944.01.T01:intron 15.0%
!!! GCTTGTATATTAAATTTTAA+GGG + Chr7:70907751-70907770 MsG0780039944.01.T01:intron 15.0%
!!! TAATTATACATCATTTGTTA+TGG - Chr7:70903217-70903236 None:intergenic 15.0%
!!! TGCTTGTATATTAAATTTTA+AGG + Chr7:70907750-70907769 MsG0780039944.01.T01:intron 15.0%
!!! TGTCCTTTTTTTTTTTTTTT+GGG + Chr7:70908300-70908319 MsG0780039944.01.T01:intron 15.0%
!! AAAAAAAAAATCAGGAAAAG+GGG - Chr7:70902446-70902465 None:intergenic 20.0%
!! AAGGTACAAAAAAAAAAATC+AGG - Chr7:70902454-70902473 None:intergenic 20.0%
!! AAGTTATAGGAACATATTTA+AGG + Chr7:70904338-70904357 MsG0780039944.01.T01:intron 20.0%
!! AATTCAAGACAAGATAAAAT+GGG + Chr7:70907554-70907573 MsG0780039944.01.T01:CDS 20.0%
!! ACTAAAATTTAATTCATGAC+TGG + Chr7:70907492-70907511 MsG0780039944.01.T01:intron 20.0%
!! AGTCATTAATATAGCAATAT+TGG - Chr7:70908148-70908167 None:intergenic 20.0%
!! AGTTATAGGAACATATTTAA+GGG + Chr7:70904339-70904358 MsG0780039944.01.T01:intron 20.0%
!! ATGTGTGTGTATTAAAAAAA+AGG + Chr7:70905899-70905918 MsG0780039944.01.T01:intron 20.0%
!! ATTAGCAATCTTTCAATAAT+GGG - Chr7:70902811-70902830 None:intergenic 20.0%
!! ATTTATAGCAGAAAAGTTAT+AGG + Chr7:70908080-70908099 MsG0780039944.01.T01:intron 20.0%
!! CAAAAAAAAAAATCAGGAAA+AGG - Chr7:70902448-70902467 None:intergenic 20.0%
!! CTAAAATTTAATTCATGACT+GGG + Chr7:70907493-70907512 MsG0780039944.01.T01:intron 20.0%
!! CTTTCATTATCAATTGAATT+TGG + Chr7:70907315-70907334 MsG0780039944.01.T01:intron 20.0%
!! GTTCATAGCTTAATAAATAA+AGG - Chr7:70903770-70903789 None:intergenic 20.0%
!! TAAATATGTTCCTATAACTT+TGG - Chr7:70904338-70904357 None:intergenic 20.0%
!! TATTAGCAATCTTTCAATAA+TGG - Chr7:70902812-70902831 None:intergenic 20.0%
!! TATTTCCATTTACATGTAAA+TGG - Chr7:70904172-70904191 None:intergenic 20.0%
!! TCTTTATAATTGGGATATAT+TGG + Chr7:70908345-70908364 MsG0780039944.01.T01:intron 20.0%
!! TGACCCAAAAAAAAAAAAAA+AGG - Chr7:70908306-70908325 None:intergenic 20.0%
!! TGTGTGTGTATTAAAAAAAA+GGG + Chr7:70905900-70905919 MsG0780039944.01.T01:intron 20.0%
!! TTACTTTAAACAAATGTTGT+AGG + Chr7:70903072-70903091 MsG0780039944.01.T01:intron 20.0%
!! TTATATTTGATTCTCTCTTT+GGG + Chr7:70905559-70905578 MsG0780039944.01.T01:intron 20.0%
!! TTTACAAAGCAGAAAATAAA+TGG - Chr7:70904070-70904089 None:intergenic 20.0%
!! TTTATATTTGATTCTCTCTT+TGG + Chr7:70905558-70905577 MsG0780039944.01.T01:intron 20.0%
!! TTTATCTTGTATCTAATGTT+CGG + Chr7:70906521-70906540 MsG0780039944.01.T01:intron 20.0%
!! TTTATTAAGCTATGAACTTA+TGG + Chr7:70903773-70903792 MsG0780039944.01.T01:intron 20.0%
!!! AATTGATAATGAAAGCTAAA+CGG - Chr7:70907310-70907329 None:intergenic 20.0%
!!! AATTTGTTTACTTCTTTCAT+AGG - Chr7:70908063-70908082 None:intergenic 20.0%
!!! AGTTTTTAAATGGTGAAAAA+GGG + Chr7:70903569-70903588 MsG0780039944.01.T01:intron 20.0%
!!! ATGTTTTTTTTTTCCATCAA+AGG + Chr7:70904426-70904445 MsG0780039944.01.T01:intron 20.0%
!!! ATTTTAATTACTGAAGAACA+AGG - Chr7:70908202-70908221 None:intergenic 20.0%
!!! ATTTTCTGCTTTGTAAATAT+CGG + Chr7:70904073-70904092 MsG0780039944.01.T01:intron 20.0%
!!! TACAATTTCAATTGATTTTC+AGG + Chr7:70904632-70904651 MsG0780039944.01.T01:intron 20.0%
!!! TGAATCAGTATTTTTTGTTT+GGG + Chr7:70906874-70906893 MsG0780039944.01.T01:intron 20.0%
!!! TTATTTTTCTAGTTAGTAAG+AGG - Chr7:70906221-70906240 None:intergenic 20.0%
!!! TTGTTGTTTTTCATCTATTT+AGG + Chr7:70906738-70906757 MsG0780039944.01.T01:intron 20.0%
!!! TTTATTCTTAATTTGATTCC+CGG + Chr7:70903146-70903165 MsG0780039944.01.T01:intron 20.0%
!!! TTTTAATTACTGAAGAACAA+GGG - Chr7:70908201-70908220 None:intergenic 20.0%
!!! TTTTACCATTTACATGTAAA+TGG + Chr7:70904164-70904183 MsG0780039944.01.T01:intron 20.0%
!!! TTTTGTTTTAATTTGTCCTT+TGG + Chr7:70904587-70904606 MsG0780039944.01.T01:intron 20.0%
! AAAAAAAAATCAGGAAAAGG+GGG - Chr7:70902445-70902464 None:intergenic 25.0%
! AAAATGAATGGAAGTTATCA+CGG + Chr7:70905498-70905517 MsG0780039944.01.T01:intron 25.0%
! AACAATCGAAAAATCAGAAA+AGG - Chr7:70902473-70902492 None:intergenic 25.0%
! AATACACACACATATATGTT+GGG - Chr7:70905892-70905911 None:intergenic 25.0%
! AATATATTCAAGGGAAGATT+TGG - Chr7:70904464-70904483 None:intergenic 25.0%
! ACATATTTAAGGGTTGTTTA+AGG + Chr7:70904349-70904368 MsG0780039944.01.T01:intron 25.0%
! ACTAATTGAGAGAAAATGAA+TGG + Chr7:70905486-70905505 MsG0780039944.01.T01:intron 25.0%
! ATCATAAGATCCTACTAATA+GGG - Chr7:70903883-70903902 None:intergenic 25.0%
! CAATATGATGATTTGATGTT+AGG + Chr7:70907933-70907952 MsG0780039944.01.T01:intron 25.0%
! CAATTCAAGACAAGATAAAA+TGG + Chr7:70907553-70907572 MsG0780039944.01.T01:CDS 25.0%
! CATATTTAAGGGTTGTTTAA+GGG + Chr7:70904350-70904369 MsG0780039944.01.T01:intron 25.0%
! CATTACAATTAAAGAAGTTG+GGG - Chr7:70903522-70903541 None:intergenic 25.0%
! CCATTACAATTAAAGAAGTT+GGG - Chr7:70903523-70903542 None:intergenic 25.0%
! CTAAACATTACAATTCAATG+AGG - Chr7:70904992-70905011 None:intergenic 25.0%
! GTCTGTTGTTCTTTATAATT+GGG + Chr7:70908336-70908355 MsG0780039944.01.T01:intron 25.0%
! GTGTGTGTATTAAAAAAAAG+GGG + Chr7:70905901-70905920 MsG0780039944.01.T01:intron 25.0%
! TAATACACACACATATATGT+TGG - Chr7:70905893-70905912 None:intergenic 25.0%
! TAATGATTGCAAAAAAGTCA+TGG + Chr7:70903321-70903340 MsG0780039944.01.T01:intron 25.0%
! TACAAGAGTAAGTATATTGA+TGG + Chr7:70902958-70902977 MsG0780039944.01.T01:intron 25.0%
! TATAGTTTAAATTCTACAGC+AGG - Chr7:70906557-70906576 None:intergenic 25.0%
! TATCACCCCATAATTAATTT+CGG - Chr7:70902699-70902718 None:intergenic 25.0%
! TATGCTCCGAAATTAATTAT+GGG + Chr7:70902690-70902709 MsG0780039944.01.T01:intron 25.0%
! TCATTAAAACTTTATCGTCA+AGG - Chr7:70905454-70905473 None:intergenic 25.0%
! TCCATTACAATTAAAGAAGT+TGG - Chr7:70903524-70903543 None:intergenic 25.0%
! TGTCTGTTGTTCTTTATAAT+TGG + Chr7:70908335-70908354 MsG0780039944.01.T01:intron 25.0%
! TGTGTGTATTAAAAAAAAGG+GGG + Chr7:70905902-70905921 MsG0780039944.01.T01:intron 25.0%
! TTATGCTCCGAAATTAATTA+TGG + Chr7:70902689-70902708 MsG0780039944.01.T01:intron 25.0%
! TTGTTTATCTAGTTAGTAAG+TGG - Chr7:70906342-70906361 None:intergenic 25.0%
! TTTAATTACTGAAGAACAAG+GGG - Chr7:70908200-70908219 None:intergenic 25.0%
! TTTCACTAAATTACATATCG+CGG - Chr7:70905737-70905756 None:intergenic 25.0%
! TTTCAGTTATCTCAAAAACT+GGG - Chr7:70907906-70907925 None:intergenic 25.0%
!! AAAAAACATGATAATGAGCT+TGG - Chr7:70906981-70907000 None:intergenic 25.0%
!! ACATTTGATGATAGAAAACT+AGG - Chr7:70904410-70904429 None:intergenic 25.0%
!! ATAACATCTAGTTGAGTTTT+AGG + Chr7:70908220-70908239 MsG0780039944.01.T01:intron 25.0%
!! ATCTTTTCTTAAATAAGGTC+TGG + Chr7:70907179-70907198 MsG0780039944.01.T01:intron 25.0%
!! CAATTATTTAGAACATCATC+TGG + Chr7:70904540-70904559 MsG0780039944.01.T01:intron 25.0%
!! CAGTTTTTAAATGGTGAAAA+AGG + Chr7:70903568-70903587 MsG0780039944.01.T01:intron 25.0%
!! CATTTGATGATAGAAAACTA+GGG - Chr7:70904409-70904428 None:intergenic 25.0%
!! GACATAAGCAAAAGATATTT+TGG - Chr7:70907288-70907307 None:intergenic 25.0%
!! GGTAAAACTCAGTTTTTAAA+TGG + Chr7:70903559-70903578 MsG0780039944.01.T01:intron 25.0%
!! TCTCAATTAGTTTCATTATC+TGG - Chr7:70905477-70905496 None:intergenic 25.0%
!! TGAGGAATTTATTCATTTTC+TGG - Chr7:70905606-70905625 None:intergenic 25.0%
!! TGGTTTAAAACTTCTCAAAA+TGG + Chr7:70907424-70907443 MsG0780039944.01.T01:intron 25.0%
!! TGTTGAATGTTTTCCTTTTT+GGG + Chr7:70903039-70903058 MsG0780039944.01.T01:intron 25.0%
!! TTGTTGAATGTTTTCCTTTT+TGG + Chr7:70903038-70903057 MsG0780039944.01.T01:intron 25.0%
!! TTTTCAGTTATCTCAAAAAC+TGG - Chr7:70907907-70907926 None:intergenic 25.0%
!! TTTTTGATGCTTGATTTAGT+TGG + Chr7:70906783-70906802 MsG0780039944.01.T01:intron 25.0%
!!! AGGAGCATATTTTACATTTT+GGG + Chr7:70903978-70903997 MsG0780039944.01.T01:intron 25.0%
!!! ATTTATTCATTTTCTGGTGA+TGG - Chr7:70905600-70905619 None:intergenic 25.0%
!!! CTGAATCAGTATTTTTTGTT+TGG + Chr7:70906873-70906892 MsG0780039944.01.T01:intron 25.0%
!!! CTTCAACTCTAAAATTATGA+AGG + Chr7:70908166-70908185 MsG0780039944.01.T01:intron 25.0%
!!! GTTATTTTGCAAAAAAGTTG+TGG + Chr7:70903248-70903267 MsG0780039944.01.T01:intron 25.0%
!!! TAGGAGCATATTTTACATTT+TGG + Chr7:70903977-70903996 MsG0780039944.01.T01:intron 25.0%
!!! TTCTTTAATTGTAATGGATC+CGG + Chr7:70903526-70903545 MsG0780039944.01.T01:intron 25.0%
!!! TTTTTTTTTTCCATCAAAGG+TGG + Chr7:70904429-70904448 MsG0780039944.01.T01:intron 25.0%
AAAAGTAAATGTTTACACCG+GGG + Chr7:70905339-70905358 MsG0780039944.01.T01:intron 30.0%
AACTTATGGTTATAAGTCTG+TGG + Chr7:70903787-70903806 MsG0780039944.01.T01:intron 30.0%
AAGATATCAGCAAAAACCAT+AGG + Chr7:70905291-70905310 MsG0780039944.01.T01:intron 30.0%
AATAATATGTTAACCCCATG+CGG + Chr7:70905405-70905424 MsG0780039944.01.T01:intron 30.0%
ACAGACACTAGTAGTATAAA+AGG - Chr7:70906661-70906680 None:intergenic 30.0%
AGAAAAGATAGATTACCAGT+CGG - Chr7:70907168-70907187 None:intergenic 30.0%
ATACACACACATATATGTTG+GGG - Chr7:70905891-70905910 None:intergenic 30.0%
ATGAGGTGACTAATTAAGAT+AGG - Chr7:70904975-70904994 None:intergenic 30.0%
ATGCTCCGAAATTAATTATG+GGG + Chr7:70902691-70902710 MsG0780039944.01.T01:intron 30.0%
CAAAAGTAAATGTTTACACC+GGG + Chr7:70905338-70905357 MsG0780039944.01.T01:intron 30.0%
CCCAACTTCTTTAATTGTAA+TGG + Chr7:70903520-70903539 MsG0780039944.01.T01:intron 30.0%
CTCTTTGTAAAAGGAAGTTA+GGG - Chr7:70906064-70906083 None:intergenic 30.0%
GATCATAAGATCCTACTAAT+AGG - Chr7:70903884-70903903 None:intergenic 30.0%
GATTGCAATATCATATCCAA+AGG - Chr7:70904606-70904625 None:intergenic 30.0%
GATTTAGGGGAAAATTGAAA+GGG - Chr7:70902209-70902228 None:intergenic 30.0%
GCAAAAGTAAATGTTTACAC+CGG + Chr7:70905337-70905356 MsG0780039944.01.T01:intron 30.0%
GCTTAATAAATAAAGGGAAC+AGG - Chr7:70903763-70903782 None:intergenic 30.0%
TAACAGTATACTACCCAAAA+AGG - Chr7:70903055-70903074 None:intergenic 30.0%
TATCTAGTTAGTAAGTGGTT+AGG - Chr7:70906337-70906356 None:intergenic 30.0%
TCATAAGATCCTACTAATAG+GGG - Chr7:70903882-70903901 None:intergenic 30.0%
TCTTTGTAAAAGGAAGTTAG+GGG - Chr7:70906063-70906082 None:intergenic 30.0%
TGCTATAACTTTCTTGAATC+TGG + Chr7:70902857-70902876 MsG0780039944.01.T01:intron 30.0%
TTAGAAGAGAATATGAGAGT+AGG + Chr7:70905233-70905252 MsG0780039944.01.T01:intron 30.0%
TTGCTCAATGTATGTAAGAT+CGG + Chr7:70903385-70903404 MsG0780039944.01.T01:intron 30.0%
! AAGGACATTTAAGATCATAC+AGG - Chr7:70908287-70908306 None:intergenic 30.0%
! TATACAAGCAAGCTTTTCAA+CGG - Chr7:70907740-70907759 None:intergenic 30.0%
! TATCTTTTTCCCCTATTAGT+AGG + Chr7:70903870-70903889 MsG0780039944.01.T01:intron 30.0%
! TGGTGTGTCTTATATTTCTA+TGG + Chr7:70907199-70907218 MsG0780039944.01.T01:intron 30.0%
!! AGAAAATTGGTTCGATTTAG+GGG - Chr7:70902222-70902241 None:intergenic 30.0%
!! GAGAAAATTGGTTCGATTTA+GGG - Chr7:70902223-70902242 None:intergenic 30.0%
!! GTCATTTTCTCGAAATCTTA+AGG - Chr7:70902758-70902777 None:intergenic 30.0%
!! TCTTTAATTGTAATGGATCC+GGG + Chr7:70903527-70903546 MsG0780039944.01.T01:intron 30.0%
!! TGAGAAAATTGGTTCGATTT+AGG - Chr7:70902224-70902243 None:intergenic 30.0%
!! TGATCTTTGAGATTGATTTC+AGG + Chr7:70907079-70907098 MsG0780039944.01.T01:intron 30.0%
!! TTTCTAGTTAGTAAGAGGTT+AGG - Chr7:70906216-70906235 None:intergenic 30.0%
!! TTTGTTTTCTTGACTTCTTC+TGG + Chr7:70905038-70905057 MsG0780039944.01.T01:intron 30.0%
!!! ATCAGTATTTTTTGTTTGGG+AGG + Chr7:70906877-70906896 MsG0780039944.01.T01:intron 30.0%
!!! ATTGAAAGGGTTTTAGGTTT+AGG - Chr7:70902196-70902215 None:intergenic 30.0%
!!! TCTCTTGGAATTGCTTTTTT+TGG + Chr7:70905151-70905170 MsG0780039944.01.T01:intron 30.0%
!!! TTGAAAGGGTTTTAGGTTTA+GGG - Chr7:70902195-70902214 None:intergenic 30.0%
AAAAGTCATGGTTACTACGT+CGG + Chr7:70903333-70903352 MsG0780039944.01.T01:intron 35.0%
AAAATCACCAACCATTGTCA+TGG - Chr7:70903115-70903134 None:intergenic 35.0%
AAATACTCTTTCGAAGGGAA+TGG - Chr7:70904754-70904773 None:intergenic 35.0%
AAGACACAGTAGCAAATGTA+AGG - Chr7:70907397-70907416 None:intergenic 35.0%
ACCAGTAAATACTCTTTCGA+AGG - Chr7:70904760-70904779 None:intergenic 35.0%
ACTGATAGGAAATACCTTGT+AGG - Chr7:70904315-70904334 None:intergenic 35.0%
AGAAAGTTTGAATCCAACCA+GGG - Chr7:70906152-70906171 None:intergenic 35.0%
AGATACGACCTACAAAACTT+CGG + Chr7:70905631-70905650 MsG0780039944.01.T01:intron 35.0%
AGATAGTTTGAATCCAACCA+GGG - Chr7:70906273-70906292 None:intergenic 35.0%
AGGAGTAATATTAAATCGGG+AGG + Chr7:70905925-70905944 MsG0780039944.01.T01:intron 35.0%
AGGGTTTGTGCTAAATATGT+TGG + Chr7:70907770-70907789 MsG0780039944.01.T01:intron 35.0%
AGTAATATTAAATCGGGAGG+GGG + Chr7:70905928-70905947 MsG0780039944.01.T01:intron 35.0%
ATATTGGAACTTCCTATCCA+TGG - Chr7:70908132-70908151 None:intergenic 35.0%
ATGAATAAGAGGGATTGAGA+GGG - Chr7:70905865-70905884 None:intergenic 35.0%
CAACTTATCCACTAGTTAGA+AGG + Chr7:70907988-70908007 MsG0780039944.01.T01:intron 35.0%
CCAGTAAATACTCTTTCGAA+GGG - Chr7:70904759-70904778 None:intergenic 35.0%
CCTCTTTGTAAAAGGAAGTT+AGG - Chr7:70906065-70906084 None:intergenic 35.0%
CGAGAATGATCAAGGAATTA+GGG - Chr7:70902254-70902273 None:intergenic 35.0%
CGATTTAGGGGAAAATTGAA+AGG - Chr7:70902210-70902229 None:intergenic 35.0%
CTCTATCACTTATCCTGAAA+GGG + Chr7:70906598-70906617 MsG0780039944.01.T01:intron 35.0%
CTGTTGTATGTATAAAGCCA+TGG + Chr7:70908112-70908131 MsG0780039944.01.T01:intron 35.0%
CTTTGTAAAAGGAAGTTAGG+GGG - Chr7:70906062-70906081 None:intergenic 35.0%
GAGTAATATTAAATCGGGAG+GGG + Chr7:70905927-70905946 MsG0780039944.01.T01:intron 35.0%
GATTAATGAGTGCATGTATG+CGG + Chr7:70904722-70904741 MsG0780039944.01.T01:CDS 35.0%
GCCAAAATGATCACTATTCA+TGG + Chr7:70904908-70904927 MsG0780039944.01.T01:intron 35.0%
GCTACATACAGCAATTATGA+AGG - Chr7:70908246-70908265 None:intergenic 35.0%
GCTATAATGAAACTGTAGAG+TGG + Chr7:70904855-70904874 MsG0780039944.01.T01:intron 35.0%
GGAGTAATATTAAATCGGGA+GGG + Chr7:70905926-70905945 MsG0780039944.01.T01:intron 35.0%
GGCTATATCACAACAGAATT+TGG + Chr7:70905772-70905791 MsG0780039944.01.T01:intron 35.0%
GGGAGGAGTAATATTAAATC+GGG + Chr7:70905922-70905941 MsG0780039944.01.T01:intron 35.0%
GGGGAGGAGTAATATTAAAT+CGG + Chr7:70905921-70905940 MsG0780039944.01.T01:intron 35.0%
GTATGTATAAAGCCATGGAT+AGG + Chr7:70908117-70908136 MsG0780039944.01.T01:intron 35.0%
GTGAAACTGTTGTAGAATAG+CGG + Chr7:70905751-70905770 MsG0780039944.01.T01:intron 35.0%
GTGTATTAAAAAAAAGGGGG+AGG + Chr7:70905905-70905924 MsG0780039944.01.T01:intron 35.0%
TACACACACATATATGTTGG+GGG - Chr7:70905890-70905909 None:intergenic 35.0%
TATATATCAATCCCAGAGAG+TGG - Chr7:70905190-70905209 None:intergenic 35.0%
TATGAATAAGAGGGATTGAG+AGG - Chr7:70905866-70905885 None:intergenic 35.0%
TATGGTTATAAGTCTGTGGA+AGG + Chr7:70903791-70903810 MsG0780039944.01.T01:intron 35.0%
TCCTATAACTTTGGACTGAT+AGG - Chr7:70904329-70904348 None:intergenic 35.0%
TCCTATCAGTCCAAAGTTAT+AGG + Chr7:70904325-70904344 MsG0780039944.01.T01:intron 35.0%
TCGAGAATGATCAAGGAATT+AGG - Chr7:70902255-70902274 None:intergenic 35.0%
TGCTCAATGTATGTAAGATC+GGG + Chr7:70903386-70903405 MsG0780039944.01.T01:intron 35.0%
TGTAAAATATGCTCCTATGC+TGG - Chr7:70903974-70903993 None:intergenic 35.0%
TGTCTCGTGACATAAATATC+CGG - Chr7:70903168-70903187 None:intergenic 35.0%
TTAAGGGTTGTTTAAGGGTT+TGG + Chr7:70904355-70904374 MsG0780039944.01.T01:intron 35.0%
TTATAAGTCTGTGGAAGGAT+GGG + Chr7:70903796-70903815 MsG0780039944.01.T01:intron 35.0%
TTGCAAAATTTCCCCCAATA+TGG + Chr7:70903478-70903497 MsG0780039944.01.T01:intron 35.0%
! AACTTCCTTTTACAAAGAGG+TGG + Chr7:70906065-70906084 MsG0780039944.01.T01:intron 35.0%
! AACTTTTCTTGCTCTTACCA+GGG + Chr7:70906910-70906929 MsG0780039944.01.T01:intron 35.0%
! ACTTCCTTTTACAAAGAGGT+GGG + Chr7:70906066-70906085 MsG0780039944.01.T01:intron 35.0%
! AGGGTTTTCGATGAGAAAAT+TGG - Chr7:70902235-70902254 None:intergenic 35.0%
! CCTAACTTCCTTTTACAAAG+AGG + Chr7:70906062-70906081 MsG0780039944.01.T01:intron 35.0%
! CTTCTAACTAGTGGATAAGT+TGG - Chr7:70907990-70908009 None:intergenic 35.0%
! GCCATGAATAGTGATCATTT+TGG - Chr7:70904912-70904931 None:intergenic 35.0%
! GGGAAAATTGAAAGGGTTTT+AGG - Chr7:70902202-70902221 None:intergenic 35.0%
! GTTTTCTTATCCACCTTTGA+TGG - Chr7:70904442-70904461 None:intergenic 35.0%
! TAACTTTTCTTGCTCTTACC+AGG + Chr7:70906909-70906928 MsG0780039944.01.T01:intron 35.0%
! TATTGGGGGAAATTTTGCAA+CGG - Chr7:70903478-70903497 None:intergenic 35.0%
! TGGTTTTTGCTGATATCTTC+TGG - Chr7:70905290-70905309 None:intergenic 35.0%
! TTGATGATAGAAAACTAGGG+AGG - Chr7:70904406-70904425 None:intergenic 35.0%
!! TAACTAGTGGATAAGTTGGT+GGG - Chr7:70907986-70908005 None:intergenic 35.0%
!! TGATGTTAGGTTGATTGAGT+TGG + Chr7:70907946-70907965 MsG0780039944.01.T01:intron 35.0%
!! TGGTGATGGTAATAAAACAC+AGG - Chr7:70905586-70905605 None:intergenic 35.0%
!!! AGTGAGTTGGTGTTTTTATG+TGG + Chr7:70902607-70902626 MsG0780039944.01.T01:intron 35.0%
AAATTTCCCCCAATATGGAC+CGG + Chr7:70903483-70903502 MsG0780039944.01.T01:intron 40.0%
AAGAAGTCCATCTTCAAGGT+CGG + Chr7:70907642-70907661 MsG0780039944.01.T01:CDS 40.0%
AATTCATGACTGGGAAACAC+AGG + Chr7:70907502-70907521 MsG0780039944.01.T01:intron 40.0%
ACACCCAACTCACAAAAACA+GGG - Chr7:70903720-70903739 None:intergenic 40.0%
ACTAGAGCACACTATCCTAT+GGG - Chr7:70906405-70906424 None:intergenic 40.0%
AGAAGTTACACACTGTAAGC+AGG + Chr7:70908394-70908413 MsG0780039944.01.T01:intron 40.0%
AGAGACCTGACTTTAGACTA+TGG + Chr7:70907255-70907274 MsG0780039944.01.T01:intron 40.0%
AGTGAAGAAGTCCATCTTCA+AGG + Chr7:70907638-70907657 MsG0780039944.01.T01:CDS 40.0%
AGTTGTGGTTACTATACACG+TGG + Chr7:70903263-70903282 MsG0780039944.01.T01:intron 40.0%
ATCCACTAGTTAGAAGGATG+AGG + Chr7:70907994-70908013 MsG0780039944.01.T01:intron 40.0%
ATCTGATCAGGTACCAATTG+TGG - Chr7:70904251-70904270 None:intergenic 40.0%
CACAAAAACAGGGGAATGAA+GGG - Chr7:70903710-70903729 None:intergenic 40.0%
CACAACGAACACAAACAACA+TGG - Chr7:70902581-70902600 None:intergenic 40.0%
CACTTATCCTGAAAGGGATT+GGG + Chr7:70906604-70906623 MsG0780039944.01.T01:intron 40.0%
CAGAAAGTTTGAATCCAACC+AGG - Chr7:70906153-70906172 None:intergenic 40.0%
CAGATAGTTTGAATCCAACC+AGG - Chr7:70906274-70906293 None:intergenic 40.0%
CATCTGTAGAGTTGTCTGTT+GGG + Chr7:70907048-70907067 MsG0780039944.01.T01:intron 40.0%
CGGTATTACAACCAACCAAT+CGG + Chr7:70905425-70905444 MsG0780039944.01.T01:intron 40.0%
CTATCCTATGGGAGAATGTT+AGG - Chr7:70906394-70906413 None:intergenic 40.0%
CTGTAAGTTGCTTAAGCTTG+AGG - Chr7:70904274-70904293 None:intergenic 40.0%
CTGTTTAACAACACTAGCTG+AGG - Chr7:70905675-70905694 None:intergenic 40.0%
CTTACCAGGGAATAGTAAGA+GGG + Chr7:70906923-70906942 MsG0780039944.01.T01:intron 40.0%
GAACAGGTGACAACAAACAA+AGG - Chr7:70903747-70903766 None:intergenic 40.0%
GAGACCTGACTTTAGACTAT+GGG + Chr7:70907256-70907275 MsG0780039944.01.T01:intron 40.0%
GAGAGTAGGAAAAAGACTTC+TGG + Chr7:70905247-70905266 MsG0780039944.01.T01:intron 40.0%
GATACGACCTACAAAACTTC+GGG + Chr7:70905632-70905651 MsG0780039944.01.T01:intron 40.0%
GCTCTATCACTTATCCTGAA+AGG + Chr7:70906597-70906616 MsG0780039944.01.T01:intron 40.0%
GGACATTGAACAGAGACAAT+CGG + Chr7:70902279-70902298 MsG0780039944.01.T01:CDS 40.0%
GTAATATTAAATCGGGAGGG+GGG + Chr7:70905929-70905948 MsG0780039944.01.T01:intron 40.0%
GTAGGTCGTATCTCTAATTG+AGG - Chr7:70905624-70905643 None:intergenic 40.0%
GTATGTAGCCTTCAACTTGA+AGG + Chr7:70908257-70908276 MsG0780039944.01.T01:intron 40.0%
GTCTCGTGACATAAATATCC+GGG - Chr7:70903167-70903186 None:intergenic 40.0%
GTGGTGAGGTTCAAAATAGT+AGG - Chr7:70904020-70904039 None:intergenic 40.0%
GTTATAAGTCTGTGGAAGGA+TGG + Chr7:70903795-70903814 MsG0780039944.01.T01:intron 40.0%
GTTGGGGGATATGAATAAGA+GGG - Chr7:70905875-70905894 None:intergenic 40.0%
TAAGCACTTAACAGCCATTG+CGG - Chr7:70904941-70904960 None:intergenic 40.0%
TACATATCGCGGAACAATAG+TGG - Chr7:70905726-70905745 None:intergenic 40.0%
TACTAGAGCACACTATCCTA+TGG - Chr7:70906406-70906425 None:intergenic 40.0%
TCAACTGCAAAGACCTCTTA+TGG - Chr7:70905381-70905400 None:intergenic 40.0%
TCACAAAAACAGGGGAATGA+AGG - Chr7:70903711-70903730 None:intergenic 40.0%
TCACTTATCCTGAAAGGGAT+TGG + Chr7:70906603-70906622 MsG0780039944.01.T01:intron 40.0%
TCCATATTCCATGTGCAAAC+AGG - Chr7:70902933-70902952 None:intergenic 40.0%
TCCTGCATCAATTGGTCATA+GGG - Chr7:70904663-70904682 None:intergenic 40.0%
TCTCACTATGCAACATCTTC+TGG - Chr7:70906828-70906847 None:intergenic 40.0%
TCTTACCAGGGAATAGTAAG+AGG + Chr7:70906922-70906941 MsG0780039944.01.T01:intron 40.0%
TGTGTTGCATATGAATCCGA+GGG - Chr7:70906022-70906041 None:intergenic 40.0%
TGTTGGGGGATATGAATAAG+AGG - Chr7:70905876-70905895 None:intergenic 40.0%
TTAAGCTTGAGGATCTGATC+AGG - Chr7:70904263-70904282 None:intergenic 40.0%
TTAGTAAGAGGTTAGGATGC+TGG - Chr7:70906209-70906228 None:intergenic 40.0%
TTAGTAAGTGGTTAGGATGC+TGG - Chr7:70906330-70906349 None:intergenic 40.0%
TTCAACTTAATCCCCTGTGT+TGG + Chr7:70902782-70902801 MsG0780039944.01.T01:intron 40.0%
TTCCTCATCCTTCTAACTAG+TGG - Chr7:70907999-70908018 None:intergenic 40.0%
TTGTCTCTGTTCAATGTCCA+TGG - Chr7:70902278-70902297 None:intergenic 40.0%
! AATAATGGGACTCCAACACA+GGG - Chr7:70902797-70902816 None:intergenic 40.0%
! AGTTTTACCAAAAACCGACC+CGG - Chr7:70903548-70903567 None:intergenic 40.0%
! ATCCTGTCATTTGAGAGTTG+AGG - Chr7:70905983-70906002 None:intergenic 40.0%
! CTAACTAGTGGATAAGTTGG+TGG - Chr7:70907987-70908006 None:intergenic 40.0%
! CTTCCTTTTACAAAGAGGTG+GGG + Chr7:70906067-70906086 MsG0780039944.01.T01:intron 40.0%
! GTTAGCGACTGTTGGTAAAT+TGG - Chr7:70906366-70906385 None:intergenic 40.0%
! TACTTTTCCCAATCCCTTTC+AGG - Chr7:70906614-70906633 None:intergenic 40.0%
! TTCCTTTTACAAAGAGGTGG+GGG + Chr7:70906068-70906087 MsG0780039944.01.T01:intron 40.0%
! TTGGGGTTTTTGCTAAAACC+CGG - Chr7:70903505-70903524 None:intergenic 40.0%
!! AGAAGTAGCATCGACAATGA+CGG - Chr7:70902365-70902384 None:intergenic 40.0%
!! AGAGATTCCCGAAGTTTTGT+AGG - Chr7:70905642-70905661 None:intergenic 40.0%
!! CCCTTCGAAAGAGTATTTAC+TGG + Chr7:70904756-70904775 MsG0780039944.01.T01:intron 40.0%
!! GCTACTGTGTCTTGTTTCTT+TGG + Chr7:70907404-70907423 MsG0780039944.01.T01:intron 40.0%
!! GTGATTTTGAGTAGTGTGAG+AGG - Chr7:70902135-70902154 None:intergenic 40.0%
!! TAATTGTAATGGATCCGGGT+CGG + Chr7:70903531-70903550 MsG0780039944.01.T01:intron 40.0%
!! TTATCTTGCTGTTGCTCTCT+TGG + Chr7:70905136-70905155 MsG0780039944.01.T01:intron 40.0%
!!! AGGGTTTTAGGTTTAGGGTT+CGG - Chr7:70902190-70902209 None:intergenic 40.0%
!!! ATTCCCCTGTTTTTGTGAGT+TGG + Chr7:70903713-70903732 MsG0780039944.01.T01:intron 40.0%
!!! TTCCCCTGTTTTTGTGAGTT+GGG + Chr7:70903714-70903733 MsG0780039944.01.T01:intron 40.0%
AAAACTGTGCATGCCAGCAT+AGG + Chr7:70903958-70903977 MsG0780039944.01.T01:intron 45.0%
AATCCAACCGACCTTGAAGA+TGG - Chr7:70907652-70907671 None:intergenic 45.0%
AATTTCCCCCAATATGGACC+GGG + Chr7:70903484-70903503 MsG0780039944.01.T01:intron 45.0%
ACCCTATGACCAATTGATGC+AGG + Chr7:70904659-70904678 MsG0780039944.01.T01:CDS 45.0%
AGCCTCAACTCTCAAATGAC+AGG + Chr7:70905978-70905997 MsG0780039944.01.T01:intron 45.0%
AGCTCCTAACATTCTCCCAT+AGG + Chr7:70906387-70906406 MsG0780039944.01.T01:intron 45.0%
ATCTTGCGTTCCAATGTGAG+TGG + Chr7:70903431-70903450 MsG0780039944.01.T01:intron 45.0%
ATGTTTACACCGGGGATGTT+TGG + Chr7:70905347-70905366 MsG0780039944.01.T01:intron 45.0%
CAAACAGGCGAAGCATATCA+AGG - Chr7:70902918-70902937 None:intergenic 45.0%
CACACCCAACTCACAAAAAC+AGG - Chr7:70903721-70903740 None:intergenic 45.0%
CACCCAACTCACAAAAACAG+GGG - Chr7:70903719-70903738 None:intergenic 45.0%
CAGAGAAAGCGAAGAGCAAA+GGG - Chr7:70902390-70902409 None:intergenic 45.0%
CCAACAGACAACTCTACAGA+TGG - Chr7:70907050-70907069 None:intergenic 45.0%
CCATCTGTAGAGTTGTCTGT+TGG + Chr7:70907047-70907066 MsG0780039944.01.T01:intron 45.0%
CCATTGTCATGGCACACTAA+AGG - Chr7:70903104-70903123 None:intergenic 45.0%
CCTTTAGTGTGCCATGACAA+TGG + Chr7:70903101-70903120 MsG0780039944.01.T01:intron 45.0%
CGTTGTGATCATGAGTGAGT+TGG + Chr7:70902594-70902613 MsG0780039944.01.T01:intron 45.0%
CTAAAACCCGGTCCATATTG+GGG - Chr7:70903493-70903512 None:intergenic 45.0%
CTAAAGTCAGGTCTCTTTCC+AGG - Chr7:70907251-70907270 None:intergenic 45.0%
CTCCTGCATCAATTGGTCAT+AGG - Chr7:70904664-70904683 None:intergenic 45.0%
GAATGGAAGTTATCACGGCT+AGG + Chr7:70905503-70905522 MsG0780039944.01.T01:intron 45.0%
GACGTGTCTTACTTACATCG+TGG + Chr7:70908370-70908389 MsG0780039944.01.T01:intron 45.0%
GATCAGGTACCAATTGTGGA+AGG - Chr7:70904247-70904266 None:intergenic 45.0%
GATGTTATCCCTCTCAACAG+AGG - Chr7:70903633-70903652 None:intergenic 45.0%
GCCTGTTTGCACATGGAATA+TGG + Chr7:70902929-70902948 MsG0780039944.01.T01:CDS 45.0%
GCTAAAACCCGGTCCATATT+GGG - Chr7:70903494-70903513 None:intergenic 45.0%
GGGGTTGAAAGAACGTAGAA+CGG - Chr7:70903906-70903925 None:intergenic 45.0%
GTCATTTGAGAGTTGAGGCT+GGG - Chr7:70905978-70905997 None:intergenic 45.0%
GTGTGTTGCATATGAATCCG+AGG - Chr7:70906023-70906042 None:intergenic 45.0%
GTGTTGCATATGAATCCGAG+GGG - Chr7:70906021-70906040 None:intergenic 45.0%
GTTGGTTGTAATACCGCATG+GGG - Chr7:70905421-70905440 None:intergenic 45.0%
TAAAACCCGGTCCATATTGG+GGG - Chr7:70903492-70903511 None:intergenic 45.0%
TAGTGTGCCATGACAATGGT+TGG + Chr7:70903105-70903124 MsG0780039944.01.T01:intron 45.0%
TCAGAGAAAGCGAAGAGCAA+AGG - Chr7:70902391-70902410 None:intergenic 45.0%
TCATTTGAGAGTTGAGGCTG+GGG - Chr7:70905977-70905996 None:intergenic 45.0%
TCCATGGTCGAGAATGATCA+AGG - Chr7:70902262-70902281 None:intergenic 45.0%
TCCTTGATCATTCTCGACCA+TGG + Chr7:70902258-70902277 MsG0780039944.01.T01:exon 45.0%
TCTTGCGTTCCAATGTGAGT+GGG + Chr7:70903432-70903451 MsG0780039944.01.T01:intron 45.0%
TGCTAAAACCCGGTCCATAT+TGG - Chr7:70903495-70903514 None:intergenic 45.0%
TGTTTACACCGGGGATGTTT+GGG + Chr7:70905348-70905367 MsG0780039944.01.T01:intron 45.0%
TTAACAGCCATTGCGGTTTG+CGG - Chr7:70904934-70904953 None:intergenic 45.0%
TTATCGTCAAGGCTACCGAT+TGG - Chr7:70905443-70905462 None:intergenic 45.0%
TTCCCCCACCTCTTTGTAAA+AGG - Chr7:70906073-70906092 None:intergenic 45.0%
TTCGGGAATCTCTTTGCCAA+TGG + Chr7:70905649-70905668 MsG0780039944.01.T01:intron 45.0%
TTTGAGTAGTGTGAGAGGAG+AGG - Chr7:70902130-70902149 None:intergenic 45.0%
TTTGGGGGTTCTTCCATAAG+AGG + Chr7:70905365-70905384 MsG0780039944.01.T01:intron 45.0%
! AGTGCCCATAGTCTAAAGTC+AGG - Chr7:70907263-70907282 None:intergenic 45.0%
! ATAATGGGACTCCAACACAG+GGG - Chr7:70902796-70902815 None:intergenic 45.0%
! ATCATGTTCCCAAGTTGACC+AGG - Chr7:70907134-70907153 None:intergenic 45.0%
! ATCGACAATGACGGAAGAGA+TGG - Chr7:70902356-70902375 None:intergenic 45.0%
! CAATAATGGGACTCCAACAC+AGG - Chr7:70902798-70902817 None:intergenic 45.0%
! CATCTAGCTCCTGCATCAAT+TGG - Chr7:70904671-70904690 None:intergenic 45.0%
! CATTTTCCATGATCCACGAC+TGG + Chr7:70905804-70905823 MsG0780039944.01.T01:intron 45.0%
! CTCACTTGCAGGTTTTCCTA+TGG - Chr7:70905310-70905329 None:intergenic 45.0%
! GCTAGCGACTGTTGGTAAAT+GGG - Chr7:70906245-70906264 None:intergenic 45.0%
! GGTTGGTTGTAATACCGCAT+GGG - Chr7:70905422-70905441 None:intergenic 45.0%
! GTGAAGTTGACAAGAAGCAC+CGG + Chr7:70907589-70907608 MsG0780039944.01.T01:CDS 45.0%
! TGAAGGGAAGAGGTTTTCAG+AGG - Chr7:70903694-70903713 None:intergenic 45.0%
! TGCTAGCGACTGTTGGTAAA+TGG - Chr7:70906246-70906265 None:intergenic 45.0%
! TGGTTGGTTGTAATACCGCA+TGG - Chr7:70905423-70905442 None:intergenic 45.0%
! TGTCATTTGAGAGTTGAGGC+TGG - Chr7:70905979-70905998 None:intergenic 45.0%
! TTTCAGGTCCAATTTGCAGC+AGG + Chr7:70907095-70907114 MsG0780039944.01.T01:intron 45.0%
! TTTCTCGCTGCATTTTTGCC+TGG + Chr7:70902998-70903017 MsG0780039944.01.T01:intron 45.0%
!! CAGGTTAGCCTTCAAGTTGA+AGG - Chr7:70908268-70908287 None:intergenic 45.0%
!! GGATAAGTTGGTGGGTTTCA+AGG - Chr7:70907978-70907997 None:intergenic 45.0%
!! GGTTTAGGGTTCGGTTTTGA+TGG - Chr7:70902181-70902200 None:intergenic 45.0%
!! TGTAGAGTGGTTTGCTGTTG+CGG + Chr7:70904868-70904887 MsG0780039944.01.T01:intron 45.0%
!! TTAGGGTTCGGTTTTGATGG+AGG - Chr7:70902178-70902197 None:intergenic 45.0%
!!! CTGTTTTTGTGAGTTGGGTG+TGG + Chr7:70903719-70903738 MsG0780039944.01.T01:intron 45.0%
!!! TTTTTTGTTATTATATTTTA+TGG + Chr7:70902645-70902664 MsG0780039944.01.T01:intron 5.0%
AACAGGGGAATGAAGGGAAG+AGG - Chr7:70903704-70903723 None:intergenic 50.0%
AAGATCGAAGCCGACCAAAG+AGG + Chr7:70908483-70908502 MsG0780039944.01.T01:CDS 50.0%
AAGATCGGGAGTCACTGCAT+AGG + Chr7:70903400-70903419 MsG0780039944.01.T01:intron 50.0%
ACAAAGAGGTGGGGGAAGAA+CGG + Chr7:70906076-70906095 MsG0780039944.01.T01:intron 50.0%
ACAACACTAGCTGAGGCCAT+TGG - Chr7:70905668-70905687 None:intergenic 50.0%
ACTTGAGGCCTGGTCAACTT+GGG + Chr7:70907123-70907142 MsG0780039944.01.T01:CDS 50.0%
AGAGTTTGCGCAAGATCGAG+AGG - Chr7:70903928-70903947 None:intergenic 50.0%
AGGGGGAACCTGAAGAACAT+TGG - Chr7:70902428-70902447 None:intergenic 50.0%
AGGTCCAATTTGCAGCAGGT+AGG + Chr7:70907099-70907118 MsG0780039944.01.T01:intron 50.0%
AGTCCATCTTCAAGGTCGGT+TGG + Chr7:70907646-70907665 MsG0780039944.01.T01:intron 50.0%
AGTCCCTACCTGCTGCAAAT+TGG - Chr7:70907106-70907125 None:intergenic 50.0%
AGTTTGCGCAAGATCGAGAG+GGG - Chr7:70903926-70903945 None:intergenic 50.0%
ATGCTTCGCCTGTTTGCACA+TGG + Chr7:70902922-70902941 MsG0780039944.01.T01:CDS 50.0%
CAACCAGGGAATGTGTAGTC+CGG - Chr7:70906138-70906157 None:intergenic 50.0%
CCTTCTCTTCTACCTCCTTC+CGG - Chr7:70907611-70907630 None:intergenic 50.0%
CTAGGCTAGAGAGGTAGAAC+TGG + Chr7:70905521-70905540 MsG0780039944.01.T01:intron 50.0%
CTTTCATCTCAAGACACGCG+TGG - Chr7:70904039-70904058 None:intergenic 50.0%
GAGAGAATGGGAGAAGGAAG+AGG - Chr7:70903660-70903679 None:intergenic 50.0%
GAGAGGTTTGTGTCGAGTGA+TGG - Chr7:70902113-70902132 None:intergenic 50.0%
GAGTTTGCGCAAGATCGAGA+GGG - Chr7:70903927-70903946 None:intergenic 50.0%
GCTAGAGAGGTAGAACTGGA+AGG + Chr7:70905525-70905544 MsG0780039944.01.T01:intron 50.0%
GCTTCCCTCTTACTATTCCC+TGG - Chr7:70906930-70906949 None:intergenic 50.0%
GGAAGAGATGGCTGAAGCAT+TGG - Chr7:70902344-70902363 None:intergenic 50.0%
GGGAATAGTAAGAGGGAAGC+TGG + Chr7:70906930-70906949 MsG0780039944.01.T01:intron 50.0%
GGGGAACCTGAAGAACATTG+GGG - Chr7:70902426-70902445 None:intergenic 50.0%
GGGGGAACCTGAAGAACATT+GGG - Chr7:70902427-70902446 None:intergenic 50.0%
GGTATCCTGTCAGTGTGTTG+AGG - Chr7:70905839-70905858 None:intergenic 50.0%
GGTCCAATTTGCAGCAGGTA+GGG + Chr7:70907100-70907119 MsG0780039944.01.T01:intron 50.0%
GTTTACACCGGGGATGTTTG+GGG + Chr7:70905349-70905368 MsG0780039944.01.T01:intron 50.0%
TAAGAGGGATTGAGAGGGAG+AGG - Chr7:70905860-70905879 None:intergenic 50.0%
TATGAATCCGAGGGGTTGAC+AGG - Chr7:70906013-70906032 None:intergenic 50.0%
TCAGGTCTCTTTCCAGGCAA+AGG - Chr7:70907245-70907264 None:intergenic 50.0%
TCAGTTGCGACGATGCTTTG+AGG + Chr7:70906954-70906973 MsG0780039944.01.T01:intron 50.0%
TGATACAGACACTCTCCGAC+TGG + Chr7:70907150-70907169 MsG0780039944.01.T01:CDS 50.0%
TGCTGATCGCCTTCCACAAT+TGG + Chr7:70904235-70904254 MsG0780039944.01.T01:CDS 50.0%
TTATCACGGCTAGGCTAGAG+AGG + Chr7:70905512-70905531 MsG0780039944.01.T01:intron 50.0%
TTGCAGACTGTCTCACTTGC+AGG - Chr7:70905321-70905340 None:intergenic 50.0%
TTTACACCGGGGATGTTTGG+GGG + Chr7:70905350-70905369 MsG0780039944.01.T01:intron 50.0%
! AGGGAAGAGGTTTTCAGAGG+TGG - Chr7:70903691-70903710 None:intergenic 50.0%
! GAAGAGGTTTTCAGAGGTGG+CGG - Chr7:70903688-70903707 None:intergenic 50.0%
! TCGCTGCATTTTTGCCTGGT+GGG + Chr7:70903002-70903021 MsG0780039944.01.T01:intron 50.0%
!! AATGGATCCGGGTCGGTTTT+TGG + Chr7:70903538-70903557 MsG0780039944.01.T01:intron 50.0%
!! AGGAGCTTGTTAGCGACTGT+TGG - Chr7:70906374-70906393 None:intergenic 50.0%
!! AGTTGACAAGAAGCACCGGA+AGG + Chr7:70907593-70907612 MsG0780039944.01.T01:CDS 50.0%
!! TGAAGCATTGGAAGCAGCAG+AGG - Chr7:70902332-70902351 None:intergenic 50.0%
AAGACCAGACAACACCCACC+AGG - Chr7:70903019-70903038 None:intergenic 55.0%
ACAGTCGCTAGCACATTCCC+TGG + Chr7:70906253-70906272 MsG0780039944.01.T01:intron 55.0%
ACCTCTTCCTGTCAACCCCT+CGG + Chr7:70906003-70906022 MsG0780039944.01.T01:intron 55.0%
ACGGTCTTACCGCATTTCCC+CGG - Chr7:70903459-70903478 None:intergenic 55.0%
AGGTTAGGATGCTGGTGCAG+TGG - Chr7:70906201-70906220 None:intergenic 55.0%
AGTGTAGCGTTCGTGCTTCG+TGG - Chr7:70902727-70902746 None:intergenic 55.0%
ATCTCAAGACACGCGTGGTG+AGG - Chr7:70904034-70904053 None:intergenic 55.0%
ATGCCCTCGGAAGTCGATGT+CGG - Chr7:70908420-70908439 None:intergenic 55.0%
ATTAAATCGGGAGGGGGGCA+GGG + Chr7:70905934-70905953 MsG0780039944.01.T01:intron 55.0%
CCGGAAGGAGGTAGAAGAGA+AGG + Chr7:70907608-70907627 MsG0780039944.01.T01:CDS 55.0%
CGCTCTCCCCAATGTTCTTC+AGG + Chr7:70902417-70902436 MsG0780039944.01.T01:CDS 55.0%
CGCTGAATCTGGTGGAGTGA+TGG + Chr7:70908451-70908470 MsG0780039944.01.T01:CDS 55.0%
CGGACTACACATTCCCTGGT+TGG + Chr7:70906136-70906155 MsG0780039944.01.T01:intron 55.0%
CGTCGGACATACTGTACACG+TGG + Chr7:70903350-70903369 MsG0780039944.01.T01:intron 55.0%
CGTTCCAATGTGAGTGGGAC+CGG + Chr7:70903437-70903456 MsG0780039944.01.T01:intron 55.0%
GAAGAACCCCCAAACATCCC+CGG - Chr7:70905359-70905378 None:intergenic 55.0%
GACACTCGCTGAGACCTACA+AGG + Chr7:70904298-70904317 MsG0780039944.01.T01:CDS 55.0%
GACTTGAGGCCTGGTCAACT+TGG + Chr7:70907122-70907141 MsG0780039944.01.T01:CDS 55.0%
GAGATCTGCGCTGAATCTGG+TGG + Chr7:70908443-70908462 MsG0780039944.01.T01:CDS 55.0%
GAGGAGATCTGCGCTGAATC+TGG + Chr7:70908440-70908459 MsG0780039944.01.T01:CDS 55.0%
GCAAAACGACCACCTTTGCC+TGG + Chr7:70907230-70907249 MsG0780039944.01.T01:intron 55.0%
GCGCAAGTCCTCTGTTGAGA+GGG + Chr7:70903622-70903641 MsG0780039944.01.T01:intron 55.0%
GGGAATGTGCTAGCGACTGT+TGG - Chr7:70906253-70906272 None:intergenic 55.0%
GGTCTCTTTCCAGGCAAAGG+TGG - Chr7:70907242-70907261 None:intergenic 55.0%
GTGTAGCGTTCGTGCTTCGT+GGG - Chr7:70902726-70902745 None:intergenic 55.0%
GTTCCAATGTGAGTGGGACC+GGG + Chr7:70903438-70903457 MsG0780039944.01.T01:intron 55.0%
GTTTGCGCAAGATCGAGAGG+GGG - Chr7:70903925-70903944 None:intergenic 55.0%
TATTAAATCGGGAGGGGGGC+AGG + Chr7:70905933-70905952 MsG0780039944.01.T01:intron 55.0%
TCCCAGAGAGTGGTGCTTAG+CGG - Chr7:70905180-70905199 None:intergenic 55.0%
TCGCTAGCACATTCCCTGGT+TGG + Chr7:70906257-70906276 MsG0780039944.01.T01:intron 55.0%
TGGTTAGGATGCTGGTGCAG+TGG - Chr7:70906322-70906341 None:intergenic 55.0%
TTCATGGCCGCAAACCGCAA+TGG + Chr7:70904924-70904943 MsG0780039944.01.T01:intron 55.0%
TTCCAATGTGAGTGGGACCG+GGG + Chr7:70903439-70903458 MsG0780039944.01.T01:intron 55.0%
TTGCAGCAGGTAGGGACTTG+AGG + Chr7:70907108-70907127 MsG0780039944.01.T01:CDS 55.0%
! ACTGGCCTCAACACACTGAC+AGG + Chr7:70905831-70905850 MsG0780039944.01.T01:intron 55.0%
! ATTAGGCGGGGAGGGGTTTT+GGG + Chr7:70906110-70906129 MsG0780039944.01.T01:intron 55.0%
! CGTCAAGGCTACCGATTGGT+TGG - Chr7:70905439-70905458 None:intergenic 55.0%
! CTCGCTGCATTTTTGCCTGG+TGG + Chr7:70903001-70903020 MsG0780039944.01.T01:intron 55.0%
! TATTAGGCGGGGAGGGGTTT+TGG + Chr7:70906109-70906128 MsG0780039944.01.T01:intron 55.0%
! TTTGCCTGGTGGGTGTTGTC+TGG + Chr7:70903012-70903031 MsG0780039944.01.T01:intron 55.0%
!! TGACAAGAAGCACCGGAAGG+AGG + Chr7:70907596-70907615 MsG0780039944.01.T01:CDS 55.0%
!!! AGGTTTTCAGAGGTGGCGGA+CGG - Chr7:70903684-70903703 None:intergenic 55.0%
CGCAGATCTCCTCATGCCCT+CGG - Chr7:70908433-70908452 None:intergenic 60.0%
CGCGCAAGTCCTCTGTTGAG+AGG + Chr7:70903621-70903640 MsG0780039944.01.T01:intron 60.0%
GACGGCGAGAGAATGGGAGA+AGG - Chr7:70903666-70903685 None:intergenic 60.0%
GCACCGGACTACACATTCCC+TGG + Chr7:70906132-70906151 MsG0780039944.01.T01:intron 60.0%
GCCGCTAAGCACCACTCTCT+GGG + Chr7:70905176-70905195 MsG0780039944.01.T01:intron 60.0%
GTGTCGCCAGTCGTGGATCA+TGG - Chr7:70905813-70905832 None:intergenic 60.0%
TCCGAGGGGTTGACAGGAAG+AGG - Chr7:70906007-70906026 None:intergenic 60.0%
TGAGTGGGACCGGGGAAATG+CGG + Chr7:70903447-70903466 MsG0780039944.01.T01:intron 60.0%
TGATCCACGACTGGCGACAC+TGG + Chr7:70905813-70905832 MsG0780039944.01.T01:intron 60.0%
TGCCGCTAAGCACCACTCTC+TGG + Chr7:70905175-70905194 MsG0780039944.01.T01:intron 60.0%
TTAAATCGGGAGGGGGGCAG+GGG + Chr7:70905935-70905954 MsG0780039944.01.T01:intron 60.0%
TTCCCCGGTCCCACTCACAT+TGG - Chr7:70903444-70903463 None:intergenic 60.0%
!! AGGCCGACATCGACTTCCGA+GGG + Chr7:70908414-70908433 MsG0780039944.01.T01:CDS 60.0%
!! CATCGACTTCCGAGGGCATG+AGG + Chr7:70908421-70908440 MsG0780039944.01.T01:CDS 60.0%
GCAGGTAGGGACTTGAGGCC+TGG + Chr7:70907113-70907132 MsG0780039944.01.T01:CDS 65.0%
TGCGGTCTTGCGCGCTACAG+CGG + Chr7:70904886-70904905 MsG0780039944.01.T01:intron 65.0%
!! CAGGCCGACATCGACTTCCG+AGG + Chr7:70908413-70908432 MsG0780039944.01.T01:CDS 65.0%
!! GTGGCGGACGGCGAGAGAAT+GGG - Chr7:70903672-70903691 None:intergenic 65.0%
GAGGCCAGTGTCGCCAGTCG+TGG - Chr7:70905820-70905839 None:intergenic 70.0%
!! GGTGGCGGACGGCGAGAGAA+TGG - Chr7:70903673-70903692 None:intergenic 70.0%
!!! CGGGGAGGGGTTTTGGGCAC+CGG + Chr7:70906116-70906135 MsG0780039944.01.T01:intron 70.0%
!! CGGGAGGGGGGCAGGGGCAC+TGG + Chr7:70905941-70905960 MsG0780039944.01.T01:intron 85.0%
Chromosome Type Strat End Strand Name
Chr7 gene 70902107 70908508 70902107 ID=MsG0780039944.01;Name=MsG0780039944.01
Chr7 mRNA 70902107 70908508 70902107 ID=MsG0780039944.01.T01;Parent=MsG0780039944.01;Name=MsG0780039944.01.T01;_AED=0.44;_eAED=0.44;_QI=170|0.66|0.71|1|1|1|7|0|246
Chr7 exon 70902107 70902438 70902107 ID=MsG0780039944.01.T01:exon:13554;Parent=MsG0780039944.01.T01
Chr7 exon 70902889 70902964 70902889 ID=MsG0780039944.01.T01:exon:13555;Parent=MsG0780039944.01.T01
Chr7 exon 70904231 70904319 70904231 ID=MsG0780039944.01.T01:exon:13556;Parent=MsG0780039944.01.T01
Chr7 exon 70904654 70904743 70904654 ID=MsG0780039944.01.T01:exon:13557;Parent=MsG0780039944.01.T01
Chr7 exon 70907101 70907171 70907101 ID=MsG0780039944.01.T01:exon:13558;Parent=MsG0780039944.01.T01
Chr7 exon 70907524 70907663 70907524 ID=MsG0780039944.01.T01:exon:13559;Parent=MsG0780039944.01.T01
Chr7 exon 70908396 70908508 70908396 ID=MsG0780039944.01.T01:exon:13560;Parent=MsG0780039944.01.T01
Chr7 five_prime_UTR 70902107 70902276 70902107 ID=MsG0780039944.01.T01:five_prime_utr;Parent=MsG0780039944.01.T01
Chr7 CDS 70902277 70902438 70902277 ID=MsG0780039944.01.T01:cds;Parent=MsG0780039944.01.T01
Chr7 CDS 70902889 70902964 70902889 ID=MsG0780039944.01.T01:cds;Parent=MsG0780039944.01.T01
Chr7 CDS 70904231 70904319 70904231 ID=MsG0780039944.01.T01:cds;Parent=MsG0780039944.01.T01
Chr7 CDS 70904654 70904743 70904654 ID=MsG0780039944.01.T01:cds;Parent=MsG0780039944.01.T01
Chr7 CDS 70907101 70907171 70907101 ID=MsG0780039944.01.T01:cds;Parent=MsG0780039944.01.T01
Chr7 CDS 70907524 70907663 70907524 ID=MsG0780039944.01.T01:cds;Parent=MsG0780039944.01.T01
Chr7 CDS 70908396 70908508 70908396 ID=MsG0780039944.01.T01:cds;Parent=MsG0780039944.01.T01
Gene Sequence

>MsG0780039944.01.T01

ATGGACATTGAACAGAGACAATCGGAACTCATCGATCAATTCGTCAAGCAAGCCTCTGCTGCTTCCAATGCTTCAGCCATCTCTTCCGTCATTGTCGATGCTACTTCTCACCCTTTGCTCTTCGCTTTCTCTGAGATTCTCGCTCTCCCCAATGTTCTTCAGCTTGAAGCAACTGATGATAAAGTCTACCTTGATATGCTTCGCCTGTTTGCACATGGAATATGGAGTGACTACAAGAATAATGCTGATCGCCTTCCACAATTGGTACCTGATCAGATCCTCAAGCTTAAGCAACTTACAGTTCTGACACTCGCTGAGACCTACAAGGTACTACCCTATGACCAATTGATGCAGGAGCTAGATGTGACAAATGTTCGTGAGCTTGAAGATTTTCTGATTAATGAGTGCATGTATGCGGTCCAATTTGCAGCAGGTAGGGACTTGAGGCCTGGTCAACTTGGGAACATGATACAGACACTCTCCGACTGGTTATCTACATCAGAAAATATGCTTGTTTCAATTCAAGACAAGATAAAATGGGCTGACTCAATGAGTGAAGTTGACAAGAAGCACCGGAAGGAGGTAGAAGAGAAGGTTGATGAAGTGAAGAAGTCCATCTTCAAGGTCGAAGTTACACACTGTAAGCAGGCCGACATCGACTTCCGAGGGCATGAGGAGATCTGCGCTGAATCTGGTGGAGTGATGGATTATGAAGAAGATCGAAGCCGACCAAAGAGGTGA
Protein sequence

>MsG0780039944.01.T01

MDIEQRQSELIDQFVKQASAASNASAISSVIVDATSHPLLFAFSEILALPNVLQLEATDDKVYLDMLRLFAHGIWSDYKNNADRLPQLVPDQILKLKQLTVLTLAETYKVLPYDQLMQELDVTNVRELEDFLINECMYAVQFAAGRDLRPGQLGNMIQTLSDWLSTSENMLVSIQDKIKWADSMSEVDKKHRKEVEEKVDEVKKSIFKVEVTHCKQADIDFRGHEEICAESGGVMDYEEDRSRPKR*